View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19918_low_16 (Length: 240)
Name: NF19918_low_16
Description: NF19918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19918_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 20356353 - 20356445
Alignment:
| Q |
134 |
tttagtcttgaatggttaaacgttacatgtaatcttttccttgattacaattgactaatctttgcaattatcttcatatttgatgcacttcat |
226 |
Q |
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| T |
20356353 |
tttagtcttgaatggttaaacgttacatgtaatctttttcttgattacaattgactaatctttgcaattaccttcatatttgatgcacttcat |
20356445 |
T |
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Target: chr2 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 17157095 - 17157144
Alignment:
| Q |
176 |
gattacaattgactaatctttgcaattatcttcatatttgatgcacttca |
225 |
Q |
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| T |
17157095 |
gattacagttgacgaatcattgcatttaacttcatatttgatgcacttca |
17157144 |
T |
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