View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19918_low_9 (Length: 329)
Name: NF19918_low_9
Description: NF19918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19918_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 17 - 301
Target Start/End: Complemental strand, 34950099 - 34949815
Alignment:
| Q |
17 |
catataagctcaaataagtctttgttaagacttaagagaggaaatggaagaatagagaaaacactattatatatcattcgtttgaatttttgaaggtgaa |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
34950099 |
catataagctcaaataagtctttgttaagacttaagagaggaaatggaagaatagagaaaacactattatatatcattcgtttgaattcttgaaggtgaa |
34950000 |
T |
|
| Q |
117 |
tcaatcggtaaattacaatgagatgaatcaatctaaagtctttttgctacattagcagctaattaacttcataactaacaaaactgaattgtaacagcta |
216 |
Q |
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|||||||||| |||||||||||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34949999 |
tcaatcggtatattacaatgagacgaatcaacctaaagtccttctgctacattagcagctaattaacttcataactaacaaaactgaattgtaacagcta |
34949900 |
T |
|
| Q |
217 |
actaattactctttagctataataatctttaaaccaattcaatggatttataattgttctcctttaaattgatttcttattgcaa |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
34949899 |
actaattactctttagctataataatctttaaaccaattcaatggatttataattgttctccgttaaattgatttcttattgcaa |
34949815 |
T |
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