View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1991_low_8 (Length: 283)
Name: NF1991_low_8
Description: NF1991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1991_low_8 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 4886604 - 4886889
Alignment:
| Q |
1 |
caataataaatatttttacactaagtttaggtgaggatgctggtgatgtagggtcaatgagagagaga--atatatatatggaattagatagaag-gggg |
97 |
Q |
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| T |
4886604 |
caataataaatatttttacactaagtttaggtgaggatgctggtgatgtagggtcaatgagagagagagaatatatatatggaattagagagaagagggg |
4886703 |
T |
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| Q |
98 |
gatgggaagtgagatgaaatgaggagaggagatcttcttttgagagtgtgtttgtgaattgtgatctttcaattcccccaagcatgatcatgtgggttgt |
197 |
Q |
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| T |
4886704 |
gatgggaagtgagatgaaatgagaagaggagatcttcttttgagagagtgtttgtgaattgtgatctttcaattcccccaagcatgatcatgtgggttgt |
4886803 |
T |
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| Q |
198 |
ggttttcattggaaagtgaagtttgatggatttcacactttatatgtacctaatggatggattgtaggttagtgaagtgctttaat |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
4886804 |
ggttttcattggaaagtgaagtttgatggatttcacactttatatgtacctaatggatggattttaggttagtgaagtgctttaat |
4886889 |
T |
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