View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19920_high_28 (Length: 208)
Name: NF19920_high_28
Description: NF19920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19920_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 4e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 32 - 191
Target Start/End: Original strand, 28966517 - 28966676
Alignment:
| Q |
32 |
gtccttcagttaatggaataaattacaataagttgtatagccatagaaatattgcaggttagtattcttgctattttgacaaaggggatttaatcatttt |
131 |
Q |
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| T |
28966517 |
gtccttcagttaatggaataaattacaataagttgtatagccatagaaatattgcaggtttgtattcttgctattttgacaaaggggatttaatcatttt |
28966616 |
T |
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| Q |
132 |
aaaataatttttaagatacgtttttataattaaaggtaaatgtatctatgtactccttgg |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28966617 |
aaaataatttttaagatacgtttttataattaaaggtaaatgtatctatgtactccttgg |
28966676 |
T |
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