View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19920_high_6 (Length: 392)
Name: NF19920_high_6
Description: NF19920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19920_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 361; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 1 - 373
Target Start/End: Original strand, 19577164 - 19577536
Alignment:
| Q |
1 |
agaatcattctggtcactgagattatgaagatgaatcggacggtgactatcgataacgaagatagtagcataaggacctaagttaagtattttgcgaaga |
100 |
Q |
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| T |
19577164 |
agaatcattctggtcactgagattatgaagatgaatcggacggtgactatcgataacgaagatagtagcataaggacctaagttaagtattttgcgaaga |
19577263 |
T |
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| Q |
101 |
tctttatgagagccccagttgattaaaacaatggaggtgtggttaatgttttggggggtgggtttagcataattatgaatttcgcggaaggatgaaacgg |
200 |
Q |
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| T |
19577264 |
tctttatgagagccccagttgattaaaacaatggaggtgtggttaatgttttggggggtgggtttagcataattatgaatttcgcggaaggatgaaacgg |
19577363 |
T |
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| Q |
201 |
ggtaagatgcgtattgaattgaatcggattcgagaatacggaaaagggttttgagtgcgcagagggaatcgacgtcggaggttgaggggaaaatgaggac |
300 |
Q |
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| T |
19577364 |
ggtaagatgcgtattgaattgaatcggattcgagaatacggaaaagggttttgagtgcgcagagggaatcgacgtcggaggttgaggggaaaatgaggac |
19577463 |
T |
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| Q |
301 |
gggggatgtggtggaagaaagttgggcggattgacggagtttggtgtagaatgaatcgactctgtgttcacga |
373 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| |
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| T |
19577464 |
gggggatgtggtggaagaaagttgggcggactgacggagttttgtgtaaaatgaatcgactctgtgttcacga |
19577536 |
T |
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