View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19920_low_29 (Length: 208)

Name: NF19920_low_29
Description: NF19920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19920_low_29
NF19920_low_29
[»] chr3 (8 HSPs)
chr3 (18-192)||(54545897-54546071)
chr3 (27-192)||(5818643-5818806)
chr3 (27-192)||(5823405-5823568)
chr3 (100-190)||(2817394-2817486)
chr3 (29-169)||(24671173-24671301)
chr3 (127-185)||(35977103-35977161)
chr3 (29-80)||(4579126-4579177)
chr3 (152-192)||(31204896-31204936)
[»] chr6 (8 HSPs)
chr6 (18-192)||(27878839-27879013)
chr6 (27-192)||(26976261-26976424)
chr6 (27-192)||(1234725-1234888)
chr6 (27-192)||(27874120-27874283)
chr6 (45-192)||(30986552-30986695)
chr6 (32-192)||(30966683-30966839)
chr6 (29-188)||(18967912-18968060)
chr6 (131-192)||(21966677-21966738)
[»] chr4 (10 HSPs)
chr4 (18-192)||(30945606-30945780)
chr4 (18-192)||(30950312-30950486)
chr4 (27-192)||(24520155-24520318)
chr4 (27-192)||(42265927-42266090)
chr4 (27-192)||(42270646-42270809)
chr4 (27-192)||(48697262-48697425)
chr4 (27-192)||(48701951-48702114)
chr4 (29-188)||(10427315-10427463)
chr4 (114-191)||(48782850-48782925)
chr4 (90-188)||(1979269-1979365)
[»] chr5 (5 HSPs)
chr5 (23-192)||(29585430-29585597)
chr5 (27-192)||(34352272-34352435)
chr5 (27-192)||(34359980-34360143)
chr5 (27-192)||(41718434-41718597)
chr5 (27-192)||(41723160-41723323)
[»] chr8 (2 HSPs)
chr8 (27-192)||(9439502-9439665)
chr8 (27-192)||(9444222-9444385)
[»] chr2 (12 HSPs)
chr2 (27-192)||(5198785-5198948)
chr2 (18-109)||(830200-830291)
chr2 (18-109)||(825544-825635)
chr2 (31-192)||(15602905-15603064)
chr2 (53-192)||(28715816-28715949)
chr2 (94-188)||(8004161-8004254)
chr2 (100-172)||(13840384-13840456)
chr2 (102-190)||(13843926-13844014)
chr2 (29-84)||(30397136-30397191)
chr2 (159-192)||(825632-825665)
chr2 (136-185)||(30397047-30397096)
chr2 (159-191)||(830288-830320)
[»] chr7 (4 HSPs)
chr7 (23-188)||(30235038-30235205)
chr7 (29-192)||(16183761-16183913)
chr7 (136-192)||(8138589-8138645)
chr7 (100-188)||(8140097-8140183)
[»] chr1 (3 HSPs)
chr1 (29-192)||(46191266-46191418)
chr1 (136-192)||(30697244-30697300)
chr1 (92-192)||(4130173-4130272)
[»] scaffold0074 (1 HSPs)
scaffold0074 (29-192)||(27356-27508)


Alignment Details
Target: chr3 (Bit Score: 167; Significance: 1e-89; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 54545897 - 54546071
Alignment:
Q  18 cttagtagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54545897 cttagtagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataa 54545996  T
Q  118 gagagagtggtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  54545997 gagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttcatccacttagtgaaagttctct 54546071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 5818806 - 5818643
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  5818806 atagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 5818709  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5818708 gtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 5818643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 5823568 - 5823405
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  5823568 atagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 5823471  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5823470 gtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 5823405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 2817486 - 2817394
Alignment:
Q  100 gtattctcctatttataagagagag--tggtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttct 190  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||| |||||||||| || |||||||| ||||||||||||| ||||||    
T  2817486 gtattctcctatttataagagagagagtggtgattgtactctccttgtatttagagagagttcttgtaatttcttccacttagtgagagttct 2817394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 24671301 - 24671173
Alignment:
Q  29 agtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggt 128  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||||||          ||||||| ||||||||||||||  ||||||||| |||    
T  24671301 agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcc----------tagtgttagtattctcctattt-caagagagag-ggt 24671214  T
Q  129 aattgtactctccttgtagttagagagaggtcctgtaattt 169  Q
    ||||   ||||||||||| ||||||||| ||| ||||||||    
T  24671213 aatttgtctctccttgtatttagagagaagtcttgtaattt 24671173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 35977103 - 35977161
Alignment:
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaa 185  Q
    |||||||| ||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  35977103 gtaattgttctctccttgtatttagagagaagtcttgtaattttttccacttagtgaaa 35977161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 4579126 - 4579177
Alignment:
Q  29 agtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctc 80  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  4579126 agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctc 4579177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 31204936 - 31204896
Alignment:
Q  152 agagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  31204936 agagaggttttgtaatttttcccacttagtgaaagttctct 31204896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 3e-87; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 27879013 - 27878839
Alignment:
Q  18 cttagtagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataa 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27879013 cttagtagaatagagagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataa 27878914  T
Q  118 gagagagtggtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  27878913 gagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctct 27878839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 26976424 - 26976261
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  26976424 atagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 26976327  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26976326 gtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 26976261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 1234725 - 1234888
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  1234725 atagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 1234822  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1234823 gtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 1234888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 27874283 - 27874120
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||||||    
T  27874283 atagtgagagaaaaaatatagagaggaaaaatagcttctcctgtgaggtttctcctagtttgtgttagt--ttgtattctcctatttataagagagagtg 27874186  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  27874185 gtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctct 27874120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 192
Target Start/End: Original strand, 30986552 - 30986695
Alignment:
Q  45 tagagagaaa-aattagtttctcctg-tgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattgtactctcct 142  Q
    |||||||||| || |||||||||||  |||||||||||||||||||||| |||      ||||| ||||||| |||||||||||||||||||||||||||    
T  30986552 tagagagaaagaaatagtttctcctcatgaggtttctcctaggtagtgtcagt------attcttctatttacaagagagagtggtaattgtactctcct 30986645  T
Q  143 tgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    || | |||||||||||||||| ||||| ||||||||||||||||||||||    
T  30986646 tgcatttagagagaggtcctgcaatttcttccacttagtgaaagttctct 30986695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 30966683 - 30966839
Alignment:
Q  32 gagaggaaaaatatagagagaaa-aattagtttctcct-gtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggta 129  Q
    ||||| ||||||||||||||||| || |||||||| || ||||||||||||||||||||  | |||      ||||| ||||||| ||||||||||||||    
T  30966683 gagagaaaaaatatagagagaaagaaatagtttctacttgtgaggtttctcctaggtagcctcagt------attcttctatttacaagagagagtggta 30966776  T
Q  130 attgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||||||||| | |||||||||||| ||| ||||| ||||||||||||||||||||||    
T  30966777 attgtactctccttgcatttagagagaggttctgcaatttcttccacttagtgaaagttctct 30966839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 18967912 - 18968060
Alignment:
Q  29 agtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggt 128  Q
    |||||||||||||||||| |||| |||  ||||||||| ||||||||||||||          ||||||| ||||||||||||||  | ||||||| | |    
T  18967912 agtgagaggaaaaatataaagaggaaatatagtttctcttgtgaggtttctcc----------tagtgttagtattctcctattt-catgagagag-gct 18967999  T
Q  129 aattgtactctccttgtagttagagagaggtcctgtaatt-ttttccacttagtgaaagtt 188  Q
    ||||   ||||||||||| ||||||||| ||| ||||||| | ||||||||||||||||||    
T  18968000 aatttgtctctccttgtatttagagagaagtcttgtaattgtcttccacttagtgaaagtt 18968060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 21966677 - 21966738
Alignment:
Q  131 ttgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    |||||||||| ||| | ||||||||||||| | |||||| ||||| ||||||||||||||||    
T  21966677 ttgtactctctttgaaattagagagaggtcttataatttcttccatttagtgaaagttctct 21966738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 7e-85; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 30945780 - 30945606
Alignment:
Q  18 cttagtagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataa 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30945780 cttagtagaatagagagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataa 30945681  T
Q  118 gagagagtggtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||    
T  30945680 gagagagtggtaattgtactctccttgtatttagagagaggttctgtaatttcttccacttagtgaaagttctct 30945606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 30950486 - 30950312
Alignment:
Q  18 cttagtagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataa 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30950486 cttagtagaatagagagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataa 30950387  T
Q  118 gagagagtggtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||||||||    
T  30950386 gagagagtggtaattgtactttccttgtatttagagagaggttctgtaatttcttccacttagtgaaagttctct 30950312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 24520318 - 24520155
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  24520318 atagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 24520221  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24520220 gtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 24520155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 42265927 - 42266090
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||||||    
T  42265927 atagtgagagaaaaaatatagagaggaaaaatagcttctcctgtgaggtttctcctagtttgtgttagt--ttgtattctcctatttataagagagagtg 42266024  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  42266025 gtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctct 42266090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 42270646 - 42270809
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||||||    
T  42270646 atagtgagagaaaaaatatagagaggaaaaatagcttctcctgtgaggtttctcctagtttgtgttagt--ttgtattctcctatttataagagagagtg 42270743  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  42270744 gtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctct 42270809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 48697425 - 48697262
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  48697425 atagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 48697328  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48697327 gtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 48697262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 48702114 - 48701951
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  48702114 atagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 48702017  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48702016 gtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 48701951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 10427315 - 10427463
Alignment:
Q  29 agtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggt 128  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||||||          ||||||| ||||||||||||||  ||||||||| |||    
T  10427315 agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcc----------tagtgttagtattctcctattt-caagagagag-ggt 10427402  T
Q  129 aattgtactctccttgtagttagagagaggtcctgtaatt-ttttccacttagtgaaagtt 188  Q
    ||||   ||||||||||| ||||||||| ||| ||||||| | ||||||||||||||||||    
T  10427403 aatttgtctctccttgtatttagagagaagtcttgtaattgtcttccacttagtgaaagtt 10427463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 48782850 - 48782925
Alignment:
Q  114 ataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctc 191  Q
    |||||||||||||||||||||||||  | |||| ||||||||||||| | |||||| |||||||||||||||||||||    
T  48782850 ataagagagagtggtaattgtactc--catgtatttagagagaggtcatctaatttcttccacttagtgaaagttctc 48782925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 188
Target Start/End: Original strand, 1979269 - 1979365
Alignment:
Q  90 gttagtgtttgtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagtt 188  Q
    ||||||| | |||||||||| |||||||||||||||||||| | ||| ||||||| | ||  ||||||||| |||||||| |||| |||| ||||||||    
T  1979269 gttagtgctagtattctcctgtttataagagagagtggtaaatataccctccttgcattt--agagaggtcgtgtaatttcttcctcttactgaaagtt 1979365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 4e-68; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 23 - 192
Target Start/End: Complemental strand, 29585597 - 29585430
Alignment:
Q  23 tagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagag 122  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||  | |||||||||||||||||||||||    
T  29585597 tagagtagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtattagt--tagtattctcctatttataagagag 29585500  T
Q  123 agtggtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29585499 agtggtaattgtactctctttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 29585430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 34352272 - 34352435
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  34352272 atagtgagagaaaaaatatagagagaaaaattagtttctcctgtgagatttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 34352369  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34352370 gtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 34352435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 34359980 - 34360143
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  34359980 atagtgagagaaaaaatatagagagaaaaattagtttctcctgtgagatttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 34360077  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34360078 gtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 34360143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 41718434 - 41718597
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  41718434 atagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 41718531  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41718532 gtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 41718597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 41723160 - 41723323
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  41723160 atagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 41723257  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41723258 gtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 41723323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 2e-63; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 9439665 - 9439502
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  9439665 atagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 9439568  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9439567 gtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 9439502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 9444385 - 9444222
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  9444385 atagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 9444288  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9444287 gtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 9444222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 2e-63; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 5198948 - 5198785
Alignment:
Q  27 atagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtg 126  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||  | |||||||||||||||||||||||||||    
T  5198948 atagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtg 5198851  T
Q  127 gtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5198850 gtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctct 5198785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 830200 - 830291
Alignment:
Q  18 cttagtagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcct 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  830200 cttagtagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcct 830291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 825544 - 825635
Alignment:
Q  18 cttagtagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcct 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  825544 cttagtagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgcgaggtttctcctaggtagtgttagtgtttgtattctcct 825635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 15602905 - 15603064
Alignment:
Q  31 tgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaa 130  Q
    |||||||||||||||||| ||||||||||| || | || ||||||||||| |||  |||||||||  | ||||||||||||||| |||| ||| ||||||    
T  15602905 tgagaggaaaaatatagaaagaaaaattagatttttctatgaggtttctcttagtaagtgttagt--tagtattctcctatttacaagatagaatggtaa 15603002  T
Q  131 ttgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    |||||| |||| || | ||||||||||||| |||||||| ||| ||||||||||||||||||    
T  15603003 ttgtacactccatgcatttagagagaggtcttgtaatttcttctacttagtgaaagttctct 15603064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 53 - 192
Target Start/End: Original strand, 28715816 - 28715949
Alignment:
Q  53 aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattgtactctccttgtagttaga 152  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||      ||||||||||||||| || |  ||||||||||||||||||||| | |||||    
T  28715816 aaaaatagtttctcttgtaaggtttctcctaggtagtgttagt------attctcctatttataggaaacggtggtaattgtactctccttgcatttaga 28715909  T
Q  153 gagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    |||| |||||||||||| |||||||| |||||||||||||    
T  28715910 gagatgtcctgtaatttcttccactttgtgaaagttctct 28715949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 8004161 - 8004254
Alignment:
Q  94 gtgtttgtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagtt 188  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||  | ||| ||||||||  | |||||| ||||| | ||||||||||    
T  8004161 gtgttagtattctcctatttataagagagagt-gtaattgtactcttcttacatttaaagagaggttttataatttcttccattcagtgaaagtt 8004254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 13840456 - 13840384
Alignment:
Q  100 gtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttttt 172  Q
    |||||||  ||||| ||||||||| | ||||||||||||||||| || ||||||||||||  |||||||||||    
T  13840456 gtattcttttatttttaagagagaattgtaattgtactctccttatatttagagagaggttttgtaatttttt 13840384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 13844014 - 13843926
Alignment:
Q  102 attctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttct 190  Q
    |||||||||||| ||| | |||||||||||| || ||| |||||| ||| | || ||||||||||||| ||||||||| ||||| ||||    
T  13844014 attctcctatttttaaaatagagtggtaattttattcttcttgtatttataaaggggtcctgtaatttcttccacttaatgaaaattct 13843926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 30397191 - 30397136
Alignment:
Q  29 agtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctag 84  Q
    ||||||||||| ||||||||||| |||  |||||||||||||||| ||||||||||    
T  30397191 agtgagaggaacaatatagagaggaaatatagtttctcctgtgagatttctcctag 30397136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 192
Target Start/End: Original strand, 825632 - 825665
Alignment:
Q  159 tcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||||| ||||||||||||||||||||||    
T  825632 tcctgtaatttcttccacttagtgaaagttctct 825665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 30397096 - 30397047
Alignment:
Q  136 ctctccttgtagttagagagaggtcctgtaattttttccacttagtgaaa 185  Q
    |||||||||||  |||| ||||||| |||||||| |||||||||||||||    
T  30397096 ctctccttgtatatagaaagaggtcttgtaatttcttccacttagtgaaa 30397047  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 830288 - 830320
Alignment:
Q  159 tcctgtaattttttccacttagtgaaagttctc 191  Q
    ||||||||||| |||||||||||||||||||||    
T  830288 tcctgtaatttcttccacttagtgaaagttctc 830320  T

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Target: chr7 (Bit Score: 108; Significance: 2e-54; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 30235038 - 30235205
Alignment:
Q  23 tagaatagtgagaggaaaaatatagagagaaaaattagtttctcctg-tgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagaga 121  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  30235038 tagagtagtgagaggaaaaatatagagagaaaaattagtttctccttatgaggtttctcttacgtagtgttagtgtttgtattctcctatttataagaga 30235137  T
Q  122 gagtggtaattgtactctccttgtagtta-gagagaggtcctgtaattttttccacttagtgaaagtt 188  Q
    |||||||||||||||||||||| ||  || ||||||||||||||||||| ||| | ||| ||||||||    
T  30235138 gagtggtaattgtactctccttataaataggagagaggtcctgtaatttcttctagttattgaaagtt 30235205  T

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Target: chr7; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 16183913 - 16183761
Alignment:
Q  29 agtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggt 128  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||          |||| ||||||||||||||  ||||||||| |||    
T  16183913 agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcctag----------tgttagtattctcctatttc-aagagagag-ggt 16183826  T
Q  129 aattgtactctccttgtagttagagagaggtcctgtaatt-ttttccacttagtgaaagttctct 192  Q
    ||||   ||||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||||    
T  16183825 aatttgtctctccttgtatttagagagaggtcttgtaattgtcttccacttagtgaaagttctct 16183761  T

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Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 8138645 - 8138589
Alignment:
Q  136 ctctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||||| |||||| |||||| |||||||| ||||| ||||||||||||||||    
T  8138645 ctctccttgtatttagagggaggtcttgtaatttcttccatttagtgaaagttctct 8138589  T

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Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 8140183 - 8140097
Alignment:
Q  100 gtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagtt 188  Q
    ||||||||||||||  ||||||||| |||||||   ||||||||||| | ||||||||||| | |||||| ||||||| ||||||||||    
T  8140183 gtattctcctatttc-aagagagag-ggtaatttgtctctccttgtattaagagagaggtcttataatttcttccactgagtgaaagtt 8140097  T

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Target: chr1 (Bit Score: 54; Significance: 3e-22; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 46191266 - 46191418
Alignment:
Q  29 agtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggt 128  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||||||          ||||||| ||||||||||||||  ||||||||| |||    
T  46191266 agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcc----------tagtgttagtattctcctattt-caagagagag-ggt 46191353  T
Q  129 aattgtactctccttgtagttagagagaggtcctgtaatt-ttttccacttagtgaaagttctct 192  Q
    ||||   |||||||| || ||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  46191354 aatttgtctctccttctatttagagagaagtcttgtaattgtcttccacttagtgaaagttctct 46191418  T

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Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 30697300 - 30697244
Alignment:
Q  136 ctctccttgtagttagagagaggtcctgtaattttttccacttagtgaaagttctct 192  Q
    ||||||||||| ||||| ||||||| |||||||| ||||||||||||||||||||||    
T  30697300 ctctccttgtatttagaaagaggtcttgtaatttcttccacttagtgaaagttctct 30697244  T

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Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 4130173 - 4130272
Alignment:
Q  92 tagtgtttgtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttt-ttccacttagtgaaagttct 190  Q
    ||||||| ||||| ||||||||  ||||||||| |||||||   ||||||||||| ||||||||| ||| ||||||| | ||||||||||||||||||||    
T  4130173 tagtgttagtattgtcctatttc-aagagagag-ggtaatttgtctctccttgtatttagagagaagtcttgtaattatcttccacttagtgaaagttct 4130270  T

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Target: scaffold0074 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 27508 - 27356
Alignment:
Q  29 agtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggt 128  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||||||          ||||||| |||||| |||||||  |||||||| ||||    
T  27508 agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcc----------tagtgttagtattcacctattt-caagagaga-tggt 27421  T
Q  129 aattgtactctccttgtagttagagagaggtcctgtaatt-ttttccacttagtgaaagttctct 192  Q
    ||||   ||||||||||| ||||||||| ||  ||||||| | ||||||||||||||||||||||    
T  27420 aatttgtctctccttgtatttagagagaagtattgtaattgtcttccacttagtgaaagttctct 27356  T

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