View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19921_high_34 (Length: 236)
Name: NF19921_high_34
Description: NF19921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19921_high_34 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 55016092 - 55016314
Alignment:
| Q |
14 |
caaaaataacagaagaaagaatcagagatattgagagtgttctcaaagaagtcatgctcattacgcttcctaagcttccagattttttaccggttttaac |
113 |
Q |
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| T |
55016092 |
caaaaataacagaagaaagaatcagagatattgagagtgttctcaaagaagtcatgctcattacgcttcctaagcttccagattttttaccggttttaac |
55016191 |
T |
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| Q |
114 |
accattattccgcggacatgtgaaggaagcgaagaagctgaggaagaaacagctggagcttatagtgccgttgataaggaaacggaaagtttacgtgaaa |
213 |
Q |
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| T |
55016192 |
accattattccgcggacatgtgaaggaagcgaagaagctgaggaagaaacagctggagcttatagcgccgttgataaggaaacggaaagtttacgtggaa |
55016291 |
T |
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| Q |
214 |
agtgatggaaaatgtggagatcc |
236 |
Q |
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| T |
55016292 |
agtgatggaaaatgtggagatcc |
55016314 |
T |
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