View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19922_high_37 (Length: 249)
Name: NF19922_high_37
Description: NF19922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19922_high_37 |
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Alignment Details
Target: chr4 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 8064750 - 8064519
Alignment:
| Q |
1 |
gtctatttagtttatatcttcatgattttctagatgcccaaaactacaattagcattacttttaagaacatgaatt-atttgaaataatgggtttaaaag |
99 |
Q |
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| T |
8064750 |
gtctatttagtttatatcttcatgattttctagatgcccaaaactacaattagcattacttttaagaacatgaattaatttgaaataatgggtttaaaag |
8064651 |
T |
|
| Q |
100 |
acaaaataaaaacaattccaaattggttcgttgataaagtgaaa-attttcatagaagnnnnnnnnnggatcatgtctctagccaagaattgtagtatgt |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
8064650 |
acaaaataaaaacaattccaaattggttcgttgataaagtgaaattttttcatagaag-aaaaaaaaggatcatgtctctagccaagaattgtagtatgt |
8064552 |
T |
|
| Q |
199 |
tagtatgaaaataatggttttggcaagataggt |
231 |
Q |
| |
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||||||||||||||||||||||||||||||||| |
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| T |
8064551 |
tagtatgaaaataatggttttggcaagataggt |
8064519 |
T |
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