View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19922_high_7 (Length: 421)
Name: NF19922_high_7
Description: NF19922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19922_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 353; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 1 - 369
Target Start/End: Complemental strand, 43016160 - 43015792
Alignment:
| Q |
1 |
acattttcttttcttagctaggtgggtaaaccaacgttggttagctagctactgacactgatttatcatccggtcaggtccatacaaatttaatttttcg |
100 |
Q |
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| T |
43016160 |
acattttcttttcttagctaggtgggtaaaccaacgttggttagctagctactgacactgatttatcatccggtcaggtccatacaaatttaattttgcg |
43016061 |
T |
|
| Q |
101 |
gtgtatgcgagcaatgtttattaatcatgtcaacactcgatctacacattccttaacccttaatttcatgcatgttctttcatctttttgtgcaaaagcg |
200 |
Q |
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| T |
43016060 |
gtgtatgcaagcaatgtttattaatcatgtcaacactcgatatacacattccttaacccttaatttcatgcatgttctttcatctttttgtgcaaaagcg |
43015961 |
T |
|
| Q |
201 |
tatacttaccaaccgaacgttgaaatttcatataattataaagttaataatgtatagctgctagtgaaacatcacgttcatttctttagaaattaacgtg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43015960 |
tatacttaccaaccgaacgttgaaatttcatataattataaagttaataatgtatagctgctagtgaaacatcacgttcatttctttagaaattaacgtg |
43015861 |
T |
|
| Q |
301 |
cctatatatccatgttccaatcaaatgctatgctttattgaaatttaaattaccaataaaaattagagg |
369 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43015860 |
cctatacatccatgttccaatcaaatgctatgctttattgaaatttaaattaccaataaaaattagagg |
43015792 |
T |
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