View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19922_low_54 (Length: 202)
Name: NF19922_low_54
Description: NF19922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19922_low_54 |
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Alignment Details
Target: chr5 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 10341027 - 10341198
Alignment:
| Q |
16 |
atgaagaagtgaagaagcaaagtatgatgattatatgataaaagtcactttaagagttatattccatatataaaggaacataattatatcacccttgaca |
115 |
Q |
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| T |
10341027 |
atgaagaagtgaagaagcaaagtatgatgattatatgataaaagtcactttaagagttatattccatatataaaggaacataattatatcacccttgaca |
10341126 |
T |
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| Q |
116 |
tttgtcattttcattagatgttaggtatttagtcatataagcaacnnnnnnnggagtgatggtggttacaaa |
187 |
Q |
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| T |
10341127 |
tttgtcattttcattagatgttaggtatttagtcatataagcaacaaaaaaaggagtgatggtggttacaaa |
10341198 |
T |
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