View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19924_high_11 (Length: 474)
Name: NF19924_high_11
Description: NF19924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19924_high_11 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 26087290 - 26086998
Alignment:
| Q |
1 |
cttcaagtacttgttggatggctcaaaacaaataaacaaagaggcgctgtagagctggaaaatggaatattaaacaagagggacgatgcaggcaacacca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26087290 |
cttcaagtacttgttggatggctcgaaacaaataaacaaagaggcgctgtagagctggaaaatggaatattaaacaagagggacgatgcaggcaacacca |
26087191 |
T |
 |
| Q |
101 |
ttttgcatgtttcagcactaagtattgagctgcaggtaatcttaggttgaatgcgtttatacacaaagggtaatctagtacaagtcat--------agac |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
26087190 |
ttttgcatgtttcagcactaagtattgagccgcaggtaatcttacgttgaatgcatttatacacaaagggtaatctagtacaagtcatacatattcagac |
26087091 |
T |
 |
| Q |
193 |
aaatttattacttcaacaacttttcttgatacacgtgatttttgttacatgttcttataaaaagggatggagagagtatttcttttttgcttt |
285 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
26087090 |
aaatttattacttcaacaacttttcttgatacacgtgatttttgttacatgttcttataaaaagggatggagagagtatttctattttgcttt |
26086998 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 270 - 459
Target Start/End: Complemental strand, 26086922 - 26086733
Alignment:
| Q |
270 |
atttcttttttgctttgttgtaattaattgtcgtatttcttgaaaacaagaaagacaacttgtaaataagatttgtggctttgttgctaacttgaatgat |
369 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26086922 |
atttcttttttgctttgttgtaattaattgtcgtatttcttgaaaacaagaaagacaacttataaataagatttgtggcattgttgctaacttgaatgat |
26086823 |
T |
 |
| Q |
370 |
ctctaacatttatattttttattaactacgtggtagcacagaaacttctattgttgctaagtactggtataaatttcgaggcaaagaatt |
459 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26086822 |
ctctaacatttatattttttattaactacgtggtagcacagaaacttctattgttgctaagtactggtataaatttcgaggcaaagaatt |
26086733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 328384 - 328304
Alignment:
| Q |
190 |
gacaaatttattacttcaacaacttttcttgatacacgtgatttttgttacatgttcttataaaaagggatggagagagta |
270 |
Q |
| |
|
||||| ||||||||| ||||||||||||| |||| | |||||||||| | || ||||||||||||||| |||| ||||| |
|
|
| T |
328384 |
gacaattttattactcaaacaacttttcttaatactcttgatttttgtaaaatactcttataaaaagggacggagggagta |
328304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 4770587 - 4770522
Alignment:
| Q |
193 |
aaatttattacttcaacaacttttcttgatacacgtgatttttgttacatgttcttataaaaaggga |
259 |
Q |
| |
|
|||| |||||||||||||| ||||| |||| | ||||||||||||||| |||||||||||||||| |
|
|
| T |
4770587 |
aaatgtattacttcaacaaattttcca-atactcatgatttttgttacatattcttataaaaaggga |
4770522 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 30648372 - 30648514
Alignment:
| Q |
1 |
cttcaagtacttgttggatggctcaaaacaaataaacaaagaggcgctgtagagctggaaaatggaatattaaacaagagggacgatgcaggcaacacca |
100 |
Q |
| |
|
||||||||||||||| | |||||||||| ||||| ||| ||||| ||| | ||||||||||| |||||||||| | ||||| | ||| ||||||| | |
|
|
| T |
30648372 |
cttcaagtacttgttagctggctcaaaaaaaatacacagagaggggctcaaaagctggaaaataaaatattaaaccaaagggataaggcaagcaacacaa |
30648471 |
T |
 |
| Q |
101 |
ttttgcatgtttcagcactaagtattgagctgcaggtaatctt |
143 |
Q |
| |
|
|||||||| ||||||||||||||| ||| | |||||||||||| |
|
|
| T |
30648472 |
ttttgcatatttcagcactaagtagtgacccgcaggtaatctt |
30648514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 28865526 - 28865648
Alignment:
| Q |
2 |
ttcaagtacttgttggatggctcaaaacaaataaacaaagaggcgctgtagagctggaaaatggaatattaaacaagagggacgatgcaggcaacaccat |
101 |
Q |
| |
|
||||||| ||||||||||||||| ||| |||| ||| || ||||||| ||||||||| | | ||||||||||| ||| ||| || ||||| |||| || |
|
|
| T |
28865526 |
ttcaagtgcttgttggatggctcgaaaaaaatgaacggagtggcgctgaagagctggagagtagaatattaaacgagaaggatgaggcaggaaacagtat |
28865625 |
T |
 |
| Q |
102 |
tttgcatgtttcagcactaagta |
124 |
Q |
| |
|
||| |||||| |||||||||||| |
|
|
| T |
28865626 |
tttacatgttgcagcactaagta |
28865648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 14726801 - 14726940
Alignment:
| Q |
1 |
cttcaagtacttgttggatggctcaaaacaaataaacaaagaggcgctgtagagctggaaaatggaatattaaacaagagggacgatgcaggcaacacca |
100 |
Q |
| |
|
||||||||||||||||| ||||||||| |||| | ||||| |||| | | || |||||| ||||||||| | ||||| || | |||||||||| |
|
|
| T |
14726801 |
cttcaagtacttgttggctggctcaaagaaaattgtaagagaggtgctgaaaacctagaaaataatatattaaaccaaagggatgaggacggcaacacca |
14726900 |
T |
 |
| Q |
101 |
ttttgcatgtttcagcactaagtattgagctgcaggtaat |
140 |
Q |
| |
|
|||||||| ||||||| ||||||| ||||||||||||||| |
|
|
| T |
14726901 |
ttttgcatatttcagccctaagtagtgagctgcaggtaat |
14726940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 26088718 - 26088804
Alignment:
| Q |
54 |
gctggaaaatggaatattaaacaagagggacgatgcaggcaacaccattttgcatgtttcagcactaagtattgagctgcaggtaat |
140 |
Q |
| |
|
|||||||||| ||||||||||| || |||| || ||| ||||||| ||||||||| ||||||||||| ||| ||| | ||||||||| |
|
|
| T |
26088718 |
gctggaaaatagaatattaaaccagtgggatgaggcacgcaacacgattttgcatatttcagcactacgtagtgacccgcaggtaat |
26088804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 459
Target Start/End: Original strand, 14727409 - 14727516
Alignment:
| Q |
352 |
gttgctaacttgaatgatctctaacatttatattttttattaactacgtggtagcacagaaacttctattgttgctaagtactggtataaatttcgaggc |
451 |
Q |
| |
|
|||||| || |||||||| ||||||| | || | || ||||| ||| ||||||||||| ||||| ||||||| ||||||||||||||||||| ||| |
|
|
| T |
14727409 |
gttgcttacatgaatgatttctaacaaatgtactgttcattaattacttggtagcacaggcacttcaattgttggtaagtactggtataaatttgaagga |
14727508 |
T |
 |
| Q |
452 |
aaagaatt |
459 |
Q |
| |
|
|||||||| |
|
|
| T |
14727509 |
aaagaatt |
14727516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 15329429 - 15329551
Alignment:
| Q |
2 |
ttcaagtacttgttggatggctcaaaacaaataaacaaagaggcgctgtagagctggaaaatggaatattaaacaagagggacgatgcaggcaacaccat |
101 |
Q |
| |
|
||||||| |||||||| |||||| ||| |||||||| || |||||| ||||| | | | | ||||||||||| ||||||| || ||||| ||||| || |
|
|
| T |
15329429 |
ttcaagtgcttgttgggtggctcgaaaaaaataaacggaggggcgctaaagagcggaagagtagaatattaaacgagagggatgaggcaggaaacacaat |
15329528 |
T |
 |
| Q |
102 |
tttgcatgtttcagcactaagta |
124 |
Q |
| |
|
||| || || |||||||||||| |
|
|
| T |
15329529 |
tttacacattgcagcactaagta |
15329551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 15509798 - 15509920
Alignment:
| Q |
2 |
ttcaagtacttgttggatggctcaaaacaaataaacaaagaggcgctgtagagctggaaaatggaatattaaacaagagggacgatgcaggcaacaccat |
101 |
Q |
| |
|
||||||| |||||||| |||||| ||| |||||||| || |||||| ||||| | | | | ||||||||||| ||||||| || ||||| ||||| || |
|
|
| T |
15509798 |
ttcaagtgcttgttgggtggctcgaaaaaaataaacggaggggcgctaaagagcggaagagtagaatattaaacgagagggatgaggcaggaaacacaat |
15509897 |
T |
 |
| Q |
102 |
tttgcatgtttcagcactaagta |
124 |
Q |
| |
|
||| || || |||||||||||| |
|
|
| T |
15509898 |
tttacacattgcagcactaagta |
15509920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 13206836 - 13206905
Alignment:
| Q |
190 |
gacaaatttattacttcaacaacttttcttgatacacgtgatttttgttacatgttcttataaaaaggga |
259 |
Q |
| |
|
||||||||||||||| | ||||||||| || |||| |||||||||| | | || ||||||||||||||| |
|
|
| T |
13206836 |
gacaaatttattactcccacaactttttttaatactcgtgatttttataaaatagtcttataaaaaggga |
13206905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 458
Target Start/End: Original strand, 30648607 - 30648652
Alignment:
| Q |
413 |
acttctattgttgctaagtactggtataaatttcgaggcaaagaat |
458 |
Q |
| |
|
||||||||||||| |||||||||||||| |||| ||||||||||| |
|
|
| T |
30648607 |
acttctattgttggtaagtactggtatagatttgaaggcaaagaat |
30648652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 6612021 - 6611950
Alignment:
| Q |
53 |
agctggaaaatggaatattaaacaagagggacgatgcaggcaacaccattttgcatgtttcagcactaagta |
124 |
Q |
| |
|
||||||||||| |||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6612021 |
agctggaaaatcaaatattaaacaagagggatgaggcaggcaacaccattttgcatatttcagcactaagta |
6611950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 41162793 - 41162711
Alignment:
| Q |
188 |
tagacaaatttattacttcaacaacttttcttgatacacgtgatttttgttacatgttcttataaaaagggatggagagagta |
270 |
Q |
| |
|
||||||||||||||| | |||||||||||||| |||| |||||||| ||||| | |||| ||||| ||||| ||||| ||||| |
|
|
| T |
41162793 |
tagacaaatttattagtccaacaacttttcttaatacccgtgatttatgttagaggttcctataataagggctggagggagta |
41162711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 30588174 - 30588130
Alignment:
| Q |
193 |
aaatttattacttcaacaacttttcttgatacacgtgatttttgt |
237 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
30588174 |
aaatttattacttcaacaacttttcttaataccagtgatttttgt |
30588130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 15037256 - 15037177
Alignment:
| Q |
191 |
acaaatttattacttcaacaacttttcttgatacacgtgatttttgttacatgttcttataaaaagggatggagagagta |
270 |
Q |
| |
|
|||||||||||||| ||| ||||||||| |||| |||||||||||||||| | | ||||||||||| |||| ||||| |
|
|
| T |
15037256 |
acaaatttattactccaatgacttttcttaatacccgtgatttttgttacaaggttcgataaaaagggacggagggagta |
15037177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 42314173 - 42314253
Alignment:
| Q |
190 |
gacaaatttattacttcaacaacttttcttgatacacgtgatttttgttacatgttcttataaaaagggatggagagagta |
270 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||| | |||||||||| | || ||||||||||||||| |||| ||||| |
|
|
| T |
42314173 |
gacaaatttattactccaacaacttttcttaatactcttgatttttgtaaaatactcttataaaaagggacggagggagta |
42314253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 52259344 - 52259391
Alignment:
| Q |
190 |
gacaaatttattacttcaacaacttttcttgatacacgtgatttttgt |
237 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||| | |||||||||| |
|
|
| T |
52259344 |
gacaaatttattactccaacaacttttcttaatacccatgatttttgt |
52259391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4819309 - 4819357
Alignment:
| Q |
1 |
cttcaagtacttgttggatggctcaaaacaaataaacaaagaggcgctg |
49 |
Q |
| |
|
|||||||| ||| | || |||||||||||||||||||||||||| |||| |
|
|
| T |
4819309 |
cttcaagtgcttctcggctggctcaaaacaaataaacaaagaggtgctg |
4819357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 18961471 - 18961551
Alignment:
| Q |
190 |
gacaaatttattacttcaacaacttttcttgatacacgtgatttttgttacatgttcttataaaaagggatggagagagta |
270 |
Q |
| |
|
||||||||||||||| ||||||| |||||| |||| ||||||| |||| | | | |||||||||||||||||||| ||||| |
|
|
| T |
18961471 |
gacaaatttattactccaacaacatttcttaatacccgtgattgttgtaagacggtcttataaaaagggatggagggagta |
18961551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 34973138 - 34973199
Alignment:
| Q |
193 |
aaatttattacttcaacaacttttcttgatacacgtgatttttgttacatgttcttataaaaa |
255 |
Q |
| |
|
||||||||||||||||||||||||||| ||| | ||||||||| |||| | ||||||||||| |
|
|
| T |
34973138 |
aaatttattacttcaacaacttttcttaatataaatgatttttg-tacaaggtcttataaaaa |
34973199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 6452109 - 6452150
Alignment:
| Q |
196 |
tttattacttcaacaacttttcttgatacacgtgatttttgt |
237 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
6452109 |
tttattacttcaacaacttttcttaatacctgtgatttttgt |
6452150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 11891985 - 11892033
Alignment:
| Q |
189 |
agacaaatttattacttcaacaacttttcttgatacacgtgatttttgt |
237 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
11891985 |
agacaattttattacttcaacaacttttcttaatactcgtgatttttgt |
11892033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 4524083 - 4524153
Alignment:
| Q |
189 |
agacaaatttattacttcaacaacttttcttgatacacgtgatttttgttaca-tgttcttataaaaaggga |
259 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||| |||| ||||| ||| | ||||||||| |||||||| |
|
|
| T |
4524083 |
agacaaatttattactccaacaacttttcttaatacccgtg-ttttttttagagtgttcttattaaaaggga |
4524153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 219
Target Start/End: Complemental strand, 20483062 - 20483032
Alignment:
| Q |
189 |
agacaaatttattacttcaacaacttttctt |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
20483062 |
agacaaatttattacttcaacaacttttctt |
20483032 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 26188317 - 26188269
Alignment:
| Q |
188 |
tagacaaatttattacttcaacaacttttcttgatacacgtgatttttg |
236 |
Q |
| |
|
||||||||||||||| | |||||||||||| | |||| ||||||||||| |
|
|
| T |
26188317 |
tagacaaatttattagtccaacaacttttcgtaatacccgtgatttttg |
26188269 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 16388647 - 16388713
Alignment:
| Q |
193 |
aaatttattacttcaacaacttttcttgatacacgtgatttttgttacatgttcttataaaaaggga |
259 |
Q |
| |
|
||||||||| || |||||||||||||| |||| || |||||||||| ||||||| ||||||||||| |
|
|
| T |
16388647 |
aaatttatttctccaacaacttttcttaatacctgtaatttttgttaaatgttctgataaaaaggga |
16388713 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 21813947 - 21813902
Alignment:
| Q |
189 |
agacaaatttattacttcaacaacttttcttgatacacgtgatttt |
234 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||| ||| ||||| |
|
|
| T |
21813947 |
agacaaatttattactccaacaacttttcttaatacccgtaatttt |
21813902 |
T |
 |
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Target: chr4 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 37433786 - 37433832
Alignment:
| Q |
190 |
gacaaatttattacttcaacaacttttcttgatacacgtgatttttg |
236 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||| | ||||||||| |
|
|
| T |
37433786 |
gacaaatttattacttcaacaatttttcttaatactcatgatttttg |
37433832 |
T |
 |
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