View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19926_low_4 (Length: 259)
Name: NF19926_low_4
Description: NF19926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19926_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 41908074 - 41908317
Alignment:
| Q |
1 |
agaattaagcaagattacacattcagtgatatgcccttaaagctaaattaactaatgacagcaatataataatcttttcagataagagacagacaaaaat |
100 |
Q |
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| T |
41908074 |
agaattaagcaagattacacattcagtgatatgcccttaaagctaaactaactaatgacagcaatataataatcttttcagataagagacggacaaaaat |
41908173 |
T |
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| Q |
101 |
caaggagtaacagaaagtttgccccgcattccaacattgattaaagaaaaaattcactgttttcaactaaacatgatgcagtactcaggtttatacatat |
200 |
Q |
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| T |
41908174 |
caaggagtaacagaaagtttgccccgcattccaacattgattaaagaaaatattcactgttttcaactaaacatgatgcagtactcaggtttatacatat |
41908273 |
T |
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| Q |
201 |
caactcaaacataaataagttccgatgcaaactcatgtcaaaat |
244 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
41908274 |
caactcaaacataaataagttctgatgcaaactcatgtcaaaat |
41908317 |
T |
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