View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19927_high_19 (Length: 481)

Name: NF19927_high_19
Description: NF19927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19927_high_19
NF19927_high_19
[»] chr5 (19 HSPs)
chr5 (138-469)||(7649938-7650268)
chr5 (141-470)||(14616428-14616756)
chr5 (142-469)||(34405767-34406094)
chr5 (267-469)||(22159663-22159867)
chr5 (145-463)||(33575013-33575331)
chr5 (142-469)||(15532200-15532528)
chr5 (144-469)||(15542384-15542710)
chr5 (239-469)||(26712437-26712669)
chr5 (239-469)||(26982175-26982407)
chr5 (142-229)||(21680634-21680721)
chr5 (142-229)||(33921372-33921459)
chr5 (142-229)||(2499762-2499850)
chr5 (150-223)||(1810198-1810272)
chr5 (270-408)||(11988991-11989133)
chr5 (149-225)||(36330999-36331075)
chr5 (404-469)||(23993320-23993385)
chr5 (142-184)||(9691083-9691125)
chr5 (142-184)||(25185699-25185741)
chr5 (155-206)||(19686465-19686517)
[»] chr6 (27 HSPs)
chr6 (20-469)||(1838393-1838836)
chr6 (142-469)||(14790537-14790864)
chr6 (142-469)||(14795565-14795892)
chr6 (143-469)||(19664667-19664991)
chr6 (286-463)||(32704398-32704575)
chr6 (267-469)||(20527285-20527490)
chr6 (142-469)||(15534975-15535300)
chr6 (141-413)||(27649077-27649347)
chr6 (142-408)||(32427281-32427544)
chr6 (270-469)||(16883594-16883795)
chr6 (241-469)||(13017287-13017517)
chr6 (355-469)||(12980705-12980818)
chr6 (142-469)||(22221642-22221967)
chr6 (142-469)||(22247477-22247802)
chr6 (253-469)||(30978321-30978539)
chr6 (147-380)||(15540578-15540809)
chr6 (348-469)||(7769594-7769715)
chr6 (355-468)||(12983592-12983704)
chr6 (270-339)||(11183962-11184033)
chr6 (26-135)||(1841591-1841701)
chr6 (44-120)||(6526733-6526810)
chr6 (140-223)||(33678939-33679025)
chr6 (397-447)||(15540529-15540579)
chr6 (50-124)||(6528589-6528667)
chr6 (142-229)||(11411039-11411127)
chr6 (142-229)||(12747086-12747173)
chr6 (155-206)||(34502636-34502688)
[»] chr7 (21 HSPs)
chr7 (142-469)||(24783327-24783654)
chr7 (142-469)||(6967066-6967393)
chr7 (142-469)||(17866353-17866680)
chr7 (250-469)||(17863202-17863421)
chr7 (142-469)||(36842937-36843264)
chr7 (142-431)||(9765758-9766046)
chr7 (241-478)||(11279401-11279639)
chr7 (345-463)||(294789-294907)
chr7 (309-469)||(46846479-46846639)
chr7 (268-463)||(23313384-23313581)
chr7 (241-469)||(36222406-36222635)
chr7 (268-469)||(3862029-3862225)
chr7 (241-463)||(23759706-23759930)
chr7 (241-469)||(33312913-33313143)
chr7 (271-458)||(23107917-23108106)
chr7 (141-229)||(17857879-17857968)
chr7 (142-229)||(38431669-38431757)
chr7 (150-229)||(3540932-3541011)
chr7 (150-229)||(6964563-6964643)
chr7 (151-225)||(28577687-28577761)
chr7 (241-300)||(294951-295008)
[»] chr1 (24 HSPs)
chr1 (142-469)||(13495906-13496232)
chr1 (142-469)||(13493181-13493508)
chr1 (142-469)||(10764838-10765165)
chr1 (142-469)||(32505857-32506181)
chr1 (142-469)||(39546161-39546486)
chr1 (268-468)||(34066264-34066466)
chr1 (142-463)||(16190179-16190499)
chr1 (267-469)||(27282230-27282434)
chr1 (322-463)||(1936551-1936691)
chr1 (336-469)||(15297251-15297383)
chr1 (355-469)||(22456705-22456818)
chr1 (355-461)||(49147825-49147930)
chr1 (348-469)||(21153174-21153295)
chr1 (142-229)||(34552438-34552525)
chr1 (152-229)||(18392669-18392747)
chr1 (155-222)||(15297492-15297559)
chr1 (268-339)||(8435284-8435357)
chr1 (142-229)||(49716647-49716735)
chr1 (166-229)||(49720129-49720192)
chr1 (150-223)||(6206164-6206237)
chr1 (422-469)||(22453415-22453462)
chr1 (416-469)||(23990362-23990415)
chr1 (150-229)||(50196723-50196803)
chr1 (26-124)||(35231149-35231251)
[»] chr4 (13 HSPs)
chr4 (150-469)||(647211-647530)
chr4 (150-469)||(650483-650802)
chr4 (142-469)||(26062690-26063020)
chr4 (353-469)||(26060506-26060622)
chr4 (142-469)||(2541803-2542128)
chr4 (140-229)||(15851450-15851539)
chr4 (142-469)||(12171901-12172218)
chr4 (142-229)||(19929155-19929242)
chr4 (157-225)||(21217350-21217418)
chr4 (142-229)||(33400075-33400163)
chr4 (268-330)||(11649329-11649393)
chr4 (353-405)||(11649444-11649496)
chr4 (268-330)||(26060668-26060732)
[»] chr2 (15 HSPs)
chr2 (142-469)||(23673345-23673671)
chr2 (141-469)||(36326845-36327172)
chr2 (140-469)||(16294817-16295145)
chr2 (142-469)||(32575685-32576013)
chr2 (241-419)||(40017948-40018126)
chr2 (241-469)||(31626468-31626698)
chr2 (142-469)||(31528307-31528635)
chr2 (241-463)||(13709995-13710218)
chr2 (142-229)||(24384925-24385014)
chr2 (166-229)||(29436025-29436088)
chr2 (150-217)||(38315809-38315876)
chr2 (155-206)||(1503204-1503256)
chr2 (155-206)||(1506408-1506460)
chr2 (353-469)||(8427144-8427259)
chr2 (170-218)||(13572070-13572118)
[»] chr3 (19 HSPs)
chr3 (142-469)||(13979405-13979730)
chr3 (353-468)||(46731414-46731529)
chr3 (241-469)||(39563607-39563837)
chr3 (142-229)||(46731612-46731699)
chr3 (142-469)||(22626312-22626638)
chr3 (142-469)||(11138570-11138896)
chr3 (348-469)||(47412101-47412222)
chr3 (141-229)||(27055149-27055237)
chr3 (142-229)||(19869255-19869343)
chr3 (142-225)||(26822039-26822122)
chr3 (268-339)||(50096829-50096902)
chr3 (376-469)||(35366295-35366387)
chr3 (142-229)||(25492175-25492263)
chr3 (268-328)||(20536459-20536520)
chr3 (142-206)||(3306147-3306213)
chr3 (142-206)||(30157797-30157863)
chr3 (144-184)||(4225619-4225659)
chr3 (155-206)||(18883509-18883561)
chr3 (138-185)||(32366879-32366927)
[»] chr8 (12 HSPs)
chr8 (150-463)||(12575308-12575620)
chr8 (142-408)||(14418445-14418707)
chr8 (268-469)||(41778866-41779068)
chr8 (309-463)||(13096946-13097099)
chr8 (142-229)||(39659712-39659799)
chr8 (142-229)||(9467341-9467429)
chr8 (142-229)||(453863-453951)
chr8 (268-330)||(41836318-41836382)
chr8 (353-405)||(41836433-41836485)
chr8 (348-438)||(44008245-44008335)
chr8 (165-229)||(13332365-13332429)
chr8 (151-185)||(22173710-22173744)
[»] scaffold0363 (1 HSPs)
scaffold0363 (142-408)||(11-273)
[»] scaffold0440 (1 HSPs)
scaffold0440 (241-469)||(9781-10010)
[»] scaffold0567 (1 HSPs)
scaffold0567 (331-463)||(5999-6131)
[»] scaffold0352 (2 HSPs)
scaffold0352 (353-469)||(2814-2930)
scaffold0352 (142-229)||(2619-2706)
[»] scaffold0264 (1 HSPs)
scaffold0264 (142-469)||(24185-24510)
[»] scaffold0068 (1 HSPs)
scaffold0068 (142-229)||(33730-33817)
[»] scaffold0273 (1 HSPs)
scaffold0273 (150-229)||(19517-19596)
[»] scaffold0063 (1 HSPs)
scaffold0063 (382-463)||(7232-7313)
[»] scaffold0500 (1 HSPs)
scaffold0500 (382-440)||(2641-2699)
[»] scaffold0766 (1 HSPs)
scaffold0766 (151-229)||(3664-3739)
[»] scaffold0084 (2 HSPs)
scaffold0084 (142-185)||(19593-19636)
scaffold0084 (142-185)||(29672-29715)
[»] scaffold0126 (1 HSPs)
scaffold0126 (151-185)||(14094-14128)


Alignment Details
Target: chr5 (Bit Score: 251; Significance: 1e-139; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 138 - 469
Target Start/End: Original strand, 7649938 - 7650268
Alignment:
Q  138 ctaatgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnn 237  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||            
T  7649938 ctaatgatagagatttgacaagtgaaccaaaactatcgaagtaataaataaattcgtattcacgaggaccgttgttaatttctactcaacaatttcttt- 7650036  T
Q  238 atcaaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7650037 atcaaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttgcttttaagaatat 7650136  T
Q  338 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 437  Q
    || ||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  7650137 tagagagaagtatggttaagacatttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgattatctagtttaaagatagatt 7650236  T
Q  438 aacaaagtaattatacccaatctctttaccta 469  Q
    ||||| |||||| ||| |||||||||||||||    
T  7650237 aacaaggtaattctactcaatctctttaccta 7650268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 141 - 470
Target Start/End: Original strand, 14616428 - 14616756
Alignment:
Q  141 atgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||        |||    
T  14616428 atgatagagatttggcaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atc 14616526  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 340  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  14616527 aaaaaggatgtatgaatttatattgattaccctaggaagttgagttgttttgtaacataaacgtaaataaaacaataaaagttgattttaagaatattag 14616626  T
Q  341 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 440  Q
    ||| ||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||    
T  14616627 agagaagtatggttaagacctttgaatcctccgaagttctcctatggtaattttcactcctaattcaatcaatgattatctagtttaacgacagattaac 14616726  T
Q  441 aaagtaattatacccaatctctttacctat 470  Q
    ||||||||| ||||||||||||| ||||||    
T  14616727 aaagtaattctacccaatctcttgacctat 14616756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 34406094 - 34405767
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||| ||||||||||||||||||||||| ||||        |||    
T  34406094 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggaccgttgttaatttctactcggcaatttcttt-atc 34405996  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||     
T  34405995 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttgtgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 34405896  T
Q  341 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 440  Q
    ||| ||||||| ||||||||||  ||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  34405895 agagaagtatggttaagaccttcaaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaac 34405796  T
Q  441 aaagtaattatacccaatctctttaccta 469  Q
    ||||||||| ||||||||||||| |||||    
T  34405795 aaagtaattctacccaatctcttgaccta 34405767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 267 - 469
Target Start/End: Complemental strand, 22159867 - 22159663
Alignment:
Q  267 ttgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttg 364  Q
    ||||||||||||||||  |||  |||| |||  ||||||||||||||||||||||| |||||||||||||||||| ||| || |||| ||||||||||||    
T  22159867 ttgccctaggcagttggattggtttttataaagtaaacgtaaataaaacaataaaaattggttttaagaatattagagagaaatatggttaagacctttg 22159768  T
Q  365 aatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctcttt 464  Q
    |||||| ||||||||| ||||||||| | ||||||||| |||||||||||  ||||||||| ||||||||||||||||||||| | |||||||||||||     
T  22159767 aatcctccgaagttctcctatggtaaatcgcactcctagttcaatcaatgactatctagttcaacgatagattaacaaagtaactctacccaatctcttg 22159668  T
Q  465 accta 469  Q
    |||||    
T  22159667 accta 22159663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 145 - 463
Target Start/End: Complemental strand, 33575331 - 33575013
Alignment:
Q  145 tagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaaa 243  Q
    |||| |||||||||||||||||||  | ||||||||| |||| |||||||| ||||||||||| ||  |||| ||||| | |||||        || |||    
T  33575331 tagaaatttggcaagtgaaccaaattcaatcgaagtaataaa-aaattcgttttcacgaggactgtatttaacttctatttagcaattttatt-attaaa 33575234  T
Q  244 aaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatattaaa 341  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| |||| ||| |     
T  33575233 aaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttagaaaattga- 33575136  T
Q  342 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt-caatcaatgtttatctagtttaacgatagattaac 440  Q
    || ||||||| ||||| |||| ||||||| ||||| ||| |||||||||||||||||||||||| ||||||||| |||| |||||| ||||  |||||||    
T  33575135 gagaagtatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcctaattacaatcaatgattatttagtttcacgacggattaac 33575036  T
Q  441 aaagtaattatacccaatctctt 463  Q
      ||||||| |||||||||||||    
T  33575035 ttagtaattctacccaatctctt 33575013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 142 - 469
Target Start/End: Original strand, 15532200 - 15532528
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||| ||||||||||  | ||||||||| |||| |||||||| | ||||||||| ||  |||| ||||||| |||||        ||     
T  15532200 tgatagatatttggcatgtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcatt-att 15532297  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttt-aagaatat 337  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| ||||| ||    
T  15532298 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 15532396  T
Q  338 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt-caatcaatgtttatctagtttaacgatagat 436  Q
    | | || ||||||| ||||| |||| |||||||   ||| ||| || ||||||||||||||||||| | | ||||||| |||| |||||| |||| ||||    
T  15532397 tga-gagaagtatggttaagtccttcgaatcctctaaagctctcctgtggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacagat 15532495  T
Q  437 taacaaagtaattatacccaatctctttaccta 469  Q
    ||||  ||||||| ||||||||||||| |||||    
T  15532496 taacttagtaattctacccaatctcttgaccta 15532528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 144 - 469
Target Start/End: Original strand, 15542384 - 15542710
Alignment:
Q  144 atagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaa 242  Q
    ||||| |||||||||||||||||||  | ||||||||| |||| |||||||| | ||||||||| ||  |||| ||||||| | |||        || ||    
T  15542384 atagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttaacaatttcatt-attaa 15542481  T
Q  243 aaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttt-aagaatatta 339  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| ||||| |||     
T  15542482 aaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattg 15542580  T
Q  340 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt-caatcaatgtttatctagtttaacgatagatta 438  Q
    | || ||||||| ||||| |||| |||||||   ||| ||| || ||||||||||||||||||| | | ||||||| |||| |||||| |||| ||||||    
T  15542581 a-gagaagtatggttaagtccttcgaatcctctaaagctctcctgtggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacagatta 15542679  T
Q  439 acaaagtaattatacccaatctctttaccta 469  Q
    ||  ||||||| ||||||||||||| |||||    
T  15542680 acttagtaattctacccaatctcttgaccta 15542710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 239 - 469
Target Start/End: Original strand, 26712437 - 26712669
Alignment:
Q  239 tcaaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaa-taaaag-ttggttttaagaa 334  Q
    ||||||||||||| |||| |||||||| | |||||||| ||||||||||| |||||||||||||||  || |||||  | |||||| ||||||||| |||    
T  26712437 tcaaaaaggatgtgtaaaatttatatt-agtgccctagacagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagattggtttta-gaa 26712534  T
Q  335 tattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatag 434  Q
     ||   ||| ||| ||| ||||| | || ||||||| ||| | ||| ||||| ||||||||||||||||||||||||||| |||| |||||| |||| ||    
T  26712535 aatctgagagaagaatggttaagtctttcgaatcctccgacgctctcctatgataatttgcactcctaattcaatcaatgattatttagtttcacgacag 26712634  T
Q  435 attaacaaagtaattatacccaatctctttaccta 469  Q
    ||||||  ||||||| ||||||||||||| |||||    
T  26712635 attaacttagtaattctacccaatctcttgaccta 26712669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 239 - 469
Target Start/End: Original strand, 26982175 - 26982407
Alignment:
Q  239 tcaaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaa-taaaag-ttggttttaagaa 334  Q
    ||||||||||||| |||| |||||||| | |||||||| ||||||||||| |||||||||||||||  || |||||  | |||||| ||||||||| |||    
T  26982175 tcaaaaaggatgtgtaaaatttatatt-agtgccctagacagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagattggtttta-gaa 26982272  T
Q  335 tattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatag 434  Q
     ||   ||| ||| ||| ||||| | || ||||||| ||| | ||| ||||| ||||||||||||||||||||||||||| |||| |||||| |||| ||    
T  26982273 aatctgagagaagaatggttaagtctttcgaatcctccgacgctctcctatgataatttgcactcctaattcaatcaatgattatttagtttcacgacag 26982372  T
Q  435 attaacaaagtaattatacccaatctctttaccta 469  Q
    ||||||  ||||||| ||||||||||||| |||||    
T  26982373 attaacttagtaattctacccaatctcttgaccta 26982407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 21680721 - 21680634
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| |||||||||||| ||||||||||||||||||||||  || || |||| |||||||||||||||||||||||||| |||||    
T  21680721 tgatagatatttggcaagtgtaccaaaactatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaa 21680634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 33921459 - 33921372
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| ||| |||||||| ||||||||||||||||||||||  || ||||||| ||||||||||||||| |||||||||| |||||    
T  33921459 tgatagatattcggcaagtgtaccaaaactatcgaagtagtaataaagttcgtatccacgaggaccgttgtgaatttctacttagcaa 33921372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 2499762 - 2499850
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaac-tatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| |||||||||||| |||||||  ||||||||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  2499762 tgatagatatttggcaagtgtaccaaaagatatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 2499850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 1810198 - 1810272
Alignment:
Q  150 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctact 223  Q
    ||||| |||||| ||||||| |||||||||||||||  || ||||||||||||||||||||||||||||||||||    
T  1810198 atttgacaagtgtaccaaaagctatcgaagtagtaataaagttcgtattcacgaggaccgttgttaatttctact 1810272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 408
Target Start/End: Original strand, 11988991 - 11989133
Alignment:
Q  270 ccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttgaat 367  Q
    ||||||||||||||||||  |||||||||||||||  |   ||||| ||||||| | | ||| |||| |||| ||| ||||| | |||||||||| ||||    
T  11988991 ccctaggcagttgagttgatttttgtaacataaacagattaaaaacgataaaagattgattttagaaaattagagagaagtaaggttaagaccttcgaat 11989090  T
Q  368 cctacgaagttcttctat--ggtaatttgcactcctaattcaa 408  Q
    ||| | ||||||| ||||  ||||||||||||||||| |||||    
T  11989091 cctccaaagttctcctatatggtaatttgcactcctagttcaa 11989133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 36331075 - 36330999
Alignment:
Q  149 gatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactca 225  Q
    |||||| |||||| ||| || ||||||||||| |||  ||||| | || ||||||||||||||||||||||||||||    
T  36331075 gatttgacaagtgtacctaatctatcgaagtaataataaaatttgcatccacgaggaccgttgttaatttctactca 36330999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 23993320 - 23993385
Alignment:
Q  404 ttcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctttaccta 469  Q
    |||||||||||| || |||||||||||||| |||||||||  | || ||||||||||||| |||||    
T  23993320 ttcaatcaatgtctacctagtttaacgatatattaacaaaacagttctacccaatctcttgaccta 23993385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 184
Target Start/End: Complemental strand, 9691125 - 9691083
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaa 184  Q
    ||||||| |||||||||||| |||||||| |||||||||||||    
T  9691125 tgatagaaatttggcaagtgtaccaaaaccatcgaagtagtaa 9691083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 184
Target Start/End: Complemental strand, 25185741 - 25185699
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaa 184  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||    
T  25185741 tgatagatatttgacaagtgtaccaaaactatcgaagtagtaa 25185699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 19686517 - 19686465
Alignment:
Q  155 gcaagtgaaccaaaactatcgaagtagt-aaataaattcgtattcacgaggac 206  Q
    ||||||| || ||||||||||||||||| |||||| ||||||| |||||||||    
T  19686517 gcaagtgtactaaaactatcgaagtagtaaaataagttcgtatccacgaggac 19686465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 20 - 469
Target Start/End: Complemental strand, 1838836 - 1838393
Alignment:
Q  20 atgaataccaacaacaccgacaggctctcgatcaaagcttttatacttgaaataactcaaaacactaaattacaatctttcttagacaaaagatgaagat 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  1838836 atgaataccaacagcaccgacaggctctcgatcaaagcttttatacttgaaataactcaaaacactgaattacaatctttcttagacaaaagctgaagat 1838737  T
Q  120 gaagatgaaaaggatgcgctaatgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttc 219  Q
    ||||      |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  1838736 gaag------aggatgcgctaatgatagagatttggcaagtgaaccaaaattatcgaagtaataaataaattcgtatccacaaggaccgttgttaatttc 1838643  T
Q  220 tactcagcaannnnnnnnatcaaaaaggatgtataaatttatattga-ttgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaat 316  Q
    ||||| ||||        ||||||||||||||||||||||||||||| ||  ||||| ||||||  |||  |||| |||  ||||||| ||||||| |||    
T  1838642 tactcggcaa-tttctttatcaaaaaggatgtataaatttatattgatttttcctagacagttggattggtttttataaagtaaacgt-aataaaagaat 1838545  T
Q  317 aaaagttggttttaagaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtt 416  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||| ||||||| ||||||||| |||| |||||| ||||||||| ||||||||| | |    
T  1838544 aaaagttggttttaagaatattagagagaagtatggttaagaccttcgaatcctccgaagttctcctat-gtaattcgcactcctagttcaatcaacgat 1838446  T
Q  417 tatctagtttaacgatagattaacaaagtaattatacccaatctctttaccta 469  Q
    ||| ||||| ||||| ||||||||||||||| | ||||||||||||| |||||    
T  1838445 tatttagttcaacgacagattaacaaagtaactctacccaatctcttgaccta 1838393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 14790864 - 14790537
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||        |||    
T  14790864 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atc 14790766  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  14790765 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 14790666  T
Q  341 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 440  Q
    ||| ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  14790665 agagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaac 14790566  T
Q  441 aaagtaattatacccaatctctttaccta 469  Q
    ||||||||| ||||||||||||| |||||    
T  14790565 aaagtaattctacccaatctcttgaccta 14790537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 14795892 - 14795565
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||   |||||||||||||||||||||||||| ||||        |||    
T  14795892 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtacctacgaggaccgttgttaatttctactcggcaatttcttt-atc 14795794  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  14795793 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 14795694  T
Q  341 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 440  Q
    ||| ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  14795693 agagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaac 14795594  T
Q  441 aaagtaattatacccaatctctttaccta 469  Q
    ||||||||| ||||||||||||| |||||    
T  14795593 aaagtaattctacccaatctcttgaccta 14795565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 143 - 469
Target Start/End: Original strand, 19664667 - 19664991
Alignment:
Q  143 gatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaa 242  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| ||||||||||| |||        |||||    
T  19664667 gataaagatttggcaagtgaaccaaaactatcgaagtaataaataaatttgtatccacgaggaccgttgtttatttctactcaacaatttcttt-atcaa 19664765  T
Q  243 aaaggatgtataaatttatattgattgccctaggcagttgagttgtt--ttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 340  Q
    ||||||||||| || ||  |  | ||||||||||||||||  ||| |  |||||| ||||||| |   ||||||||||||||| | |||||||| ||||     
T  19664766 aaaggatgtattaaattcaa--ggttgccctaggcagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggtttaagaaaattag 19664863  T
Q  341 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 440  Q
    ||| | ||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||||    
T  19664864 agagatgtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctag-ttcacgacagattaac 19664962  T
Q  441 aaagtaattatacccaatctctttaccta 469  Q
    ||||||| | |||||||| |||| |||||    
T  19664963 aaagtaactctacccaatatcttgaccta 19664991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 286 - 463
Target Start/End: Original strand, 32704398 - 32704575
Alignment:
Q  286 tgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctat 385  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |||||||||| |||||||  |||||||| ||||    
T  32704398 tgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctat 32704497  T
Q  386 ggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 463  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  32704498 ggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacagagtaattctacccaatctctt 32704575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 267 - 469
Target Start/End: Original strand, 20527285 - 20527490
Alignment:
Q  267 ttgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaa-caataaaagttggttttaagaatattaaagataagtatgattaagaccttt 363  Q
    ||||||||||||||||| |||  ||||||||| ||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||     
T  20527285 ttgccctaggcagttgaattgatttttgtaacgtaaacataaataaaaacaataaaagttggttttaagaatattagagagaagtatggttaagaccttc 20527384  T
Q  364 gaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 463  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||  || |||| ||||||||||| ||| | |||||||||||||    
T  20527385 gaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctaacttcacgacagattaacaaattaactttacccaatctctt 20527484  T
Q  464 taccta 469  Q
     |||||    
T  20527485 gaccta 20527490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 15535300 - 15534975
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 241  Q
    |||| ||||||| ||| ||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| |        || |    
T  15535300 tgatggagatttcgcatgtgaaccaaaattatcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcagccatttcttt-ataa 15535202  T
Q  242 aaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 340  Q
    |||||||||||| || ||  |  | ||||||||||||||||||||| |||||||| | |||   |   ||||||||||||||| | ||| | || |||||    
T  15535201 aaaaggatgtattaaattcaa--ggttgccctaggcagttgagttgattttgtaaaacaaatagattaaaaacaataaaagtttggttttacaaaattaa 15535104  T
Q  341 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 440  Q
    ||  | ||||| ||||||||||  |||||| ||||||| | ||||||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||    
T  15535103 agtgatgtatggttaagaccttcaaatcctccgaagttttcctatggtaatttgcattcctaattcaatcaatgattatctagttcaacgacagattaac 15535004  T
Q  441 aaagtaattatacccaatctctttaccta 469  Q
    ||||||| | || |||||||||| |||||    
T  15535003 aaagtaactctaaccaatctcttgaccta 15534975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 141 - 413
Target Start/End: Complemental strand, 27649347 - 27649077
Alignment:
Q  141 atgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||  ||| || |||||||||||||||||||| |||||||||||         ||    
T  27649347 atgatagagatttggcaagtgaactaaaactatcgaagtaataaataagatcgaatccacgaggaccgttgttaattcctactcagcaatttctttc-tc 27649249  T
Q  241 aaaaaggatgtat-aaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatat 337  Q
     ||| ||||| || ||||||   ||| | ||||||||||||||  |||  |||| ||||||||||||| || ||||||||||||||||||||||||| ||    
T  27649248 gaaa-ggatgcattaaattt---ttggtcgccctaggcagttggattggtttttataacataaacgtagatgaaacaataaaagttggttttaagaaaat 27649153  T
Q  338 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaat 413  Q
    || ||  ||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||| ||||    
T  27649152 tagagcgaagtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcacttctaattcaagcaat 27649077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 142 - 408
Target Start/End: Complemental strand, 32427544 - 32427281
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 241  Q
    ||||||| |||||| |||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||| |||||||||||||        ||||    
T  32427544 tgatagatatttggtaagtgaaccaaaactatcgaagtaataaataaatttgtatctacgaggaccgttgttaa-ttctactcagcaa-tttctttatca 32427447  T
Q  242 aaaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 339  Q
    |||| ||||||| || ||  |  | |||||||| |||||||  |||   ||||||| ||||||| |   |||||||| |||||| | ||| |||| ||||    
T  32427446 aaaaagatgtattaaattcaa--ggttgcccta-gcagttggattggtatttgtaaaataaacgaattaaaaacaatgaaagtttggttttagaaaatta 32427350  T
Q  340 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaa 408  Q
     ||| | || |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  32427349 gagagatgtttgattaagacctttgaatcctctgaagttctcctatggtaatttgcactcctaattcaa 32427281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 270 - 469
Target Start/End: Complemental strand, 16883795 - 16883594
Alignment:
Q  270 ccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttgaa 366  Q
    |||||||||||||| |||  |||||||||||||||| |   ||||||||||||| ||||||||| ||| |||| ||| ||||||| ||||||| || |||    
T  16883795 ccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaagtatggttaagacattcgaa 16883697  T
Q  367 tcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctttac 466  Q
    |||| ||||||||| ||||||||||||||||| ||||||||| ||||| |||||||  || |||| ||||||||| | |||   ||||||||||||| ||    
T  16883696 tccttcgaagttctcctatggtaatttgcactactaattcaaacaatgattatctatgttcacgaaagattaacacaataaccctacccaatctcttgac 16883597  T
Q  467 cta 469  Q
    |||    
T  16883596 cta 16883594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 241 - 469
Target Start/End: Original strand, 13017287 - 13017517
Alignment:
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttta-agaatat 337  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | ||||||||  |||| ||    
T  13017287 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttcagaaaat 13017385  T
Q  338 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagat 436  Q
    | | || ||||||| ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| |||   ||||||| |||| |||||| ||||  |||    
T  13017386 tga-gagaagtatggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatatgatcaatgattatttagtttcacgacggat 13017484  T
Q  437 taacaaagtaattatacccaatctctttaccta 469  Q
    ||||  ||||||| ||||||||||||| |||||    
T  13017485 taacttagtaattctacccaatctcttgaccta 13017517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 355 - 469
Target Start/End: Original strand, 12980705 - 12980818
Alignment:
Q  355 aagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacc 454  Q
    |||||||| ||||||| ||||||||| |||||  |||||| || |||| |||||||||||||  ||||||||||||| ||||||||||||||||| ||||    
T  12980705 aagaccttcgaatcctccgaagttctcctatgaaaatttgtaccccta-ttcaatcaatgttcgtctagtttaacgacagattaacaaagtaattctacc 12980803  T
Q  455 caatctctttaccta 469  Q
    ||||||||| |||||    
T  12980804 caatctcttgaccta 12980818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 22221967 - 22221642
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||| | |||||||||  |  |||  ||||||| |||||        ||     
T  22221967 tgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaa-taaattcgtttccacgaggactatatttagcttctactaagcaatttcatt-att 22221870  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttaagaatat 337  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||||| ||| ||||  ||||| ||| ||||| ||||||| | |||||||| |||| ||    
T  22221869 aaaaaggatgtataaattattattggt-gccctaggcagttgagttgatttagtaa--taaac-taattaaaaacaataaagaattggtttttagaaaat 22221774  T
Q  338 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagat 436  Q
    | | || ||| ||| ||||| |||| ||||||| ||||| ||| |||||||||||||||||| | ||| ||||||||| |||| |||| | ||||  |||    
T  22221773 tga-gagaagcatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcttaaatacaatcaatgattatttagtatcacgacggat 22221675  T
Q  437 taacaaagtaattatacccaatctctttaccta 469  Q
    ||||  ||||||| ||||||||||||| |||||    
T  22221674 taacttagtaattctacccaatctcttgaccta 22221642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 22247802 - 22247477
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||| | |||||||||  |  |||  ||||||| |||||        ||     
T  22247802 tgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaa-taaattcgtttccacgaggactatatttagcttctactaagcaatttcatt-att 22247705  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttaagaatat 337  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||||| ||| ||||  ||||| ||| ||||| ||||||| | |||||||| |||| ||    
T  22247704 aaaaaggatgtataaattattattggt-gccctaggcagttgagttgatttagtaa--taaac-taattaaaaacaataaagaattggtttttagaaaat 22247609  T
Q  338 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagat 436  Q
    | | || ||| ||| ||||| |||| ||||||| ||||| ||| |||||||||||||||||| | ||| ||||||||| |||| |||| | ||||  |||    
T  22247608 tga-gagaagcatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcttaaatacaatcaatgattatttagtatcacgacggat 22247510  T
Q  437 taacaaagtaattatacccaatctctttaccta 469  Q
    ||||  ||||||| ||||||||||||| |||||    
T  22247509 taacttagtaattctacccaatctcttgaccta 22247477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 469
Target Start/End: Original strand, 30978321 - 30978539
Alignment:
Q  253 taaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttt-aagaatattaaagataagta 349  Q
    ||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| ||||| ||| | || |||||    
T  30978321 taaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattga-gagaagta 30978418  T
Q  350 tgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagattaacaaagtaat 448  Q
    || ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| ||| | ||||||| |||| |||||| ||||  |||||||  ||||||    
T  30978419 tggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggattaacttagtaat 30978518  T
Q  449 tatacccaatctctttaccta 469  Q
    | ||||||||||||| |||||    
T  30978519 tctacccaatctcttgaccta 30978539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 380
Target Start/End: Complemental strand, 15540809 - 15540578
Alignment:
Q  147 gagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaaaaag 246  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||  ||   ||||| ||||||| |||||||||||||        |||||||||    
T  15540809 gagatttggcaagtgaaccaaaactatcgaagtaataaataaatttgtaaccaatcggaccattgttaacttctactcagcaa-tttctatatcaaaaag 15540711  T
Q  247 gatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagata 345  Q
    ||||||| || ||  |  | || |||||||||||||||||| |||| ||| ||||| | |   |||||||||||||||   ||| |||| |||||||| |    
T  15540710 gatgtattaaattcaa--ggtttccctaggcagttgagttgattttctaaaataaagggattaaaaacaataaaagtttagttttagaaaattaaagaga 15540613  T
Q  346 agtatgattaagacctttgaatcctacgaagttct 380  Q
      |||| |||||||||| ||||||| |||||||||    
T  15540612 tttatggttaagaccttcgaatcctccgaagttct 15540578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 348 - 469
Target Start/End: Original strand, 7769594 - 7769715
Alignment:
Q  348 tatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaa 447  Q
    |||| |||||||||| ||||||| ||| | |||| ||||||||||||||| |  ||||||||||||||| || ||||||||||| | |||||||||||||    
T  7769594 tatggttaagaccttcgaatcctccgatgctcttatatggtaatttgcaccctcaattcaatcaatgttcatttagtttaacgacatattaacaaagtaa 7769693  T
Q  448 ttatacccaatctctttaccta 469  Q
    || ||| |||||| || |||||    
T  7769694 ttctactcaatcttttgaccta 7769715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 355 - 468
Target Start/End: Original strand, 12983592 - 12983704
Alignment:
Q  355 aagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacc 454  Q
    |||||||| ||||||| ||||||||| |||||  ||| || || |||| |||||||||||||  ||||||||||||| ||||||||||||||||| ||||    
T  12983592 aagaccttcgaatcctccgaagttctcctatgaaaatctgtaccccta-ttcaatcaatgttcgtctagtttaacgacagattaacaaagtaattctacc 12983690  T
Q  455 caatctctttacct 468  Q
    ||||||||| ||||    
T  12983691 caatctcttgacct 12983704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 11183962 - 11184033
Alignment:
Q  270 ccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 339  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||||| |||| ||||    
T  11183962 ccctaggcagttgagttgatttttgtaacataaacgtaataaaaacaataaaagttggtttttagaaaatta 11184033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 1841701 - 1841591
Alignment:
Q  26 accaacaacaccgacaggctctcgatcaaagcttttatacttgaaataactcaaaacactaa-attacaatctttcttagacaaaagatgaagatgaaga 124  Q
    ||||||||||  |||| |||||  || || |||||||||||| ||||||||||||||| ||| |  ||||||||||||| ||||||| || |||||||||    
T  1841701 accaacaacattgacaagctctgcataaatgcttttatacttaaaataactcaaaacagtaacacaacaatctttcttatacaaaagctggagatgaaga 1841602  T
Q  125 tgaaaaggatg 135  Q
    |||| ||||||    
T  1841601 tgaagaggatg 1841591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 6526733 - 6526810
Alignment:
Q  44 ctctcgatcaaagcttttatacttgaaataactcaaaacactaa-attacaatctttcttagacaaaagatgaagatg 120  Q
    ||||| ||||| || ||||||||| |||| |||||||||| ||| |||||||||||||||||||||||| || |||||    
T  6526733 ctctccatcaatgcgtttatacttaaaatcactcaaaacagtaacattacaatctttcttagacaaaagctgcagatg 6526810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 33678939 - 33679025
Alignment:
Q  140 aatgatagagatttggcaagtgaaccaaaa---ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctact 223  Q
    ||||||| | |||||||||||| |||||||   ||||||||||||||   || ||| ||| ||||||||||||||||||||||||||    
T  33678939 aatgataaatatttggcaagtgtaccaaaaaaactatcgaagtagtactaaagttcatatccacgaggaccgttgttaatttctact 33679025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 447
Target Start/End: Complemental strand, 15540579 - 15540529
Alignment:
Q  397 ctcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaa 447  Q
    ||||||||| |||||||| |||||||||| ||||| |||||||||||||||    
T  15540579 ctcctaatttaatcaatgattatctagttcaacgacagattaacaaagtaa 15540529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 6528589 - 6528667
Alignment:
Q  50 atcaaagcttttatacttgaaataactcaaaacactaa----attacaatctttcttagacaaaagatgaagatgaaga 124  Q
    ||||| ||||||||||||||||| |||||||||| |||     ||||||||||||| ||| ||||| ||||||||||||    
T  6528589 atcaatgcttttatacttgaaatcactcaaaacagtaatattcttacaatctttctcagataaaagctgaagatgaaga 6528667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 11411127 - 11411039
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| | ||| |||||| ||||||| ||||||||||| |||  || ||||||| |||||| ||| ||||||||||||||| |||||    
T  11411127 tgatagataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgagtaccattgttaatttctacttagcaa 11411039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 12747173 - 12747086
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| ||||| |||||| ||||||| |||||||||||||||  || ||||||| ||| ||||| ||| | ||||||||||| ||||    
T  12747173 tgatagatatttgacaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggactgtt-tcaatttctactcggcaa 12747086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 34502688 - 34502636
Alignment:
Q  155 gcaagtgaaccaaaactatcgaagtagt-aaataaattcgtattcacgaggac 206  Q
    ||||||| || ||||||||||||||||| |||||| ||||||| |||||||||    
T  34502688 gcaagtgtactaaaactatcgaagtagtaaaataagttcgtatccacgaggac 34502636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 228; Significance: 1e-125; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 24783654 - 24783327
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 241  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||| ||||        ||||    
T  24783654 tgatagagatttgacaagtgaaccaaaactatcgaagtaataaataaatttgtatccacgaggaccgttgttaatttctactcggcaatttcttttatca 24783555  T
Q  242 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 341  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  24783554 aaaaggatgtataaatttatattgattgtccaaggcagttgagttgttttgtaacataaacttaaataaaacaataaaagttggttttaagaatattaga 24783455  T
Q  342 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 441  Q
    || ||||||| |||||||||||||||||| |||||||||  ||||||||||| || ||||||||||||||||| |||||||||||||||| |||||||||    
T  24783454 gagaagtatggttaagacctttgaatcctccgaagttctcatatggtaattttcattcctaattcaatcaatgattatctagtttaacgagagattaaca 24783355  T
Q  442 aagtaattatacccaatctctttaccta 469  Q
    |||||||||||||||||||||| |||||    
T  24783354 aagtaattatacccaatctcttgaccta 24783327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 6967393 - 6967066
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||        |||    
T  6967393 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atc 6967295  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  6967294 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 6967195  T
Q  341 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 440  Q
    ||| ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  6967194 agagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgatagattaac 6967095  T
Q  441 aaagtaattatacccaatctctttaccta 469  Q
    ||||||||| ||||||||||||| |||||    
T  6967094 aaagtaattctacccaatctcttaaccta 6967066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 142 - 469
Target Start/End: Original strand, 17866353 - 17866680
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||        |||    
T  17866353 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atc 17866451  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 340  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  17866452 aaaaaggatgtataaatttatattgattgccctaggcagttgagctgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 17866551  T
Q  341 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 440  Q
    ||| ||||||| || ||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  17866552 agagaagtatggtttagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaac 17866651  T
Q  441 aaagtaattatacccaatctctttaccta 469  Q
    ||||||||| ||||||||||||| |||||    
T  17866652 aaagtaattctacccaatctcttgaccta 17866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 250 - 469
Target Start/End: Original strand, 17863202 - 17863421
Alignment:
Q  250 gtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagta 349  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||    
T  17863202 gtataaatttatattgattgccctaggcagttgagctgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattagagagaagta 17863301  T
Q  350 tgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaatt 449  Q
    || |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  17863302 tggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagtaatt 17863401  T
Q  450 atacccaatctctttaccta 469  Q
     ||||||||||||| |||||    
T  17863402 ctacccaatctcttgaccta 17863421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 142 - 469
Target Start/End: Original strand, 36842937 - 36843264
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 241  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||  ||| || ||| ||||||||||||||||||||||||||||        |||     
T  36842937 tgatagagatttggcaagtgaaccaaaattatcgaagtaataaataagatcgaatccacaaggaccgttgttaatttctactcagcaatttcgtt-atcg 36843035  T
Q  242 aaaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 339  Q
    ||| |||||||| || ||  || | ||||||||||||||||  |||  |||| |||  ||||||||||||||||||||||||||||||||| ||||||||    
T  36843036 aaa-ggatgtattaaattcaatggtttgccctaggcagttggattggtttttataaagtaaacgtaaataaaacaataaaagttggttttatgaatatta 36843134  T
Q  340 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaa 439  Q
     ||| ||||||| |||||||||| ||||||| ||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||| ||||| |||||||    
T  36843135 gagagaagtatggttaagaccttcgaatcctccgaagttctcctatggtaattcgcactcctacttcaatcaatgattatctagttcaacgacagattaa 36843234  T
Q  440 caaagtaattatacccaatctctttaccta 469  Q
    |||| ||| | ||||||||||||| |||||    
T  36843235 caaattaactctacccaatctcttgaccta 36843264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 142 - 431
Target Start/End: Complemental strand, 9766046 - 9765758
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 241  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||  ||| || ||  ||| |||||||||||||||||||||||         |||     
T  9766046 tgatagatatttggcaagttaaccaaaactatcgaagtaataaataagatcgaatccataagggccgttgttaatttctactcagca-ttttctttatcg 9765948  T
Q  242 aaaaggatgtat-aaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatt 338  Q
    |||||||||||| |||||| |   | ||||||||||||||||  |||  |||| |||  ||||| ||||||||| |||||||||||||||||||||||||    
T  9765947 aaaaggatgtattaaatttct---ggttgccctaggcagttggattggtttttataaagtaaacataaataaaataataaaagttggttttaagaatatt 9765851  T
Q  339 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacga 431  Q
    | ||| ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  9765850 agagagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttcacga 9765758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 241 - 478
Target Start/End: Complemental strand, 11279639 - 11279401
Alignment:
Q  241 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaac-aataaaagttggttttaagaatat 337  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||||||||  |   ||||| ||||||  |||||||| |||| ||    
T  11279639 aaaaaggatgtataaaatttatattggt-gccctaggcagttgagttgattttgtaacataaactgattaaaaacgaataaagattggtttttagaagat 11279541  T
Q  338 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 437  Q
    | | || ||||||| ||||| |||| ||||| | ||||||||| || |||||||||||||||||| |||||| |||| |||| |||||| |||| |||||    
T  11279540 tga-gagaagtatggttaagtccttcgaatctttcgaagttctcctctggtaatttgcactcctagttcaataaatgattatttagtttcacgacagatt 11279442  T
Q  438 aacaaagtaattatacccaatctctttacctatgcttctcc 478  Q
    |||  ||||||| ||||||||||||| ||||| | ||||||    
T  11279441 aacttagtaattctacccaatctcttgacctaggattctcc 11279401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 345 - 463
Target Start/End: Complemental strand, 294907 - 294789
Alignment:
Q  345 aagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaag 444  Q
    ||||||| ||||| | || ||||||| ||||||||| ||||||||||||||||||||||| ||||||||| ||||||| || ||||| ||||||||||||    
T  294907 aagtatggttaagtctttcgaatcctccgaagttctcctatggtaatttgcactcctaatgcaatcaatgattatctaattcaacgacagattaacaaag 294808  T
Q  445 taattatacccaatctctt 463  Q
    |||||||||||||||||||    
T  294807 taattatacccaatctctt 294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 309 - 469
Target Start/End: Original strand, 46846479 - 46846639
Alignment:
Q  309 aaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattca 407  Q
    ||||||||||||| |||||||| |||| ||| | || ||||||| ||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||    
T  46846479 aaaacaataaaagattggtttttagaaaattga-gagaagtatggttaagtccttcgaatcctccgaagttcttctatggtaatttgcactcctagttca 46846577  T
Q  408 atcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctttaccta 469  Q
    ||||||| |||| |||||| |||| ||||||||  | ||||| ||||||||||||| |||||    
T  46846578 atcaatgattatttagtttcacgacagattaacctaataattctacccaatctcttgaccta 46846639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 268 - 463
Target Start/End: Original strand, 23313384 - 23313581
Alignment:
Q  268 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttg 364  Q
    ||||||||| |||||| |||  |||||||||||||||| |   |||||||||||||  ||||||| |||| |||| ||| ||||||| ||||||||||||    
T  23313384 tgccctaggtagttgaattgatttttgtaacataaacgaattaaaaacaataaaagaatggtttt-agaaaattagagagaagtatggttaagacctttg 23313482  T
Q  365 aatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 463  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||| ||||| |||||||| || || | | |||||||  |||| | |||||||||||||    
T  23313483 aatcctccgaagttctcctatggtaatttgcactactaattcaaacaatgattatctaggttcacaacatattaacactgtaactctacccaatctctt 23313581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 241 - 469
Target Start/End: Original strand, 36222406 - 36222635
Alignment:
Q  241 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatat 337  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||| |||| ||||||||||  |   |||||||  |||| |||||||| |||| ||    
T  36222406 aaaaaggatgtataaaatttatattggt-gccctaggcagttgagttgattttctaacataaactgattaaaaacaaagaaagattggtttttagaagat 36222504  T
Q  338 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 437  Q
    | | || ||||||| ||||| |||| ||||||| ||||||||| |||||||||||| |||||||| ||||||||||| |||| |||||| || | | |||    
T  36222505 tga-gagaagtatggttaagtccttcgaatcctccgaagttctcctatggtaattttcactcctagttcaatcaatgattatttagtttcactacaaatt 36222603  T
Q  438 aacaaagtaattatacccaatctctttaccta 469  Q
    |||  ||||||| |||| |||||||| |||||    
T  36222604 aacttagtaattttacctaatctcttgaccta 36222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 469
Target Start/End: Original strand, 3862029 - 3862225
Alignment:
Q  268 tgccctaggcagttgagttg---ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagaccttt 363  Q
    |||||||||||||| | |||   |||||||||||||||  |   ||||||||||||| |||||||||  || |||| ||| ||||||||||||||||||     
T  3862029 tgccctaggcagttcaattgattttttgtaacataaactgattaaaaacaataaaagattggttttataaa-attagagagaagtatgattaagaccttc 3862127  T
Q  364 gaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 463  Q
    ||||||| ||||||||| |||||        ||||||||||||||  |||| |||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  3862128 gaatccttcgaagttctcctatg--------cactcctaattcaagaaatgattatctagttcaacgacagattaacaaagtaattctacccaatctctt 3862219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 241 - 463
Target Start/End: Original strand, 23759706 - 23759930
Alignment:
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttt-aagaatat 337  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| ||||| ||    
T  23759706 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 23759804  T
Q  338 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagat 436  Q
      | || ||||||| ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| ||| | ||||||| |||| |||||| ||||  |||    
T  23759805 cga-gagaagtatggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggat 23759903  T
Q  437 taacaaagtaattatacccaatctctt 463  Q
    ||||  ||||||| |||||||||||||    
T  23759904 taacttagtaattctacccaatctctt 23759930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 241 - 469
Target Start/End: Complemental strand, 33313143 - 33312913
Alignment:
Q  241 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaac-aataaaag-ttggttttaagaata 336  Q
    ||||||||||| |||| ||||||||| | ||||||||||||||||||| |||||||||||||||| || |||||  |||||| | ||||||||| ||| |    
T  33313143 aaaaaggatgtgtaaaatttatattggt-gccctaggcagttgagttgattttgtaacataaacggaattaaaaataataaaggattggtttta-gaaaa 33313046  T
Q  337 ttaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagat 436  Q
    |   ||| ||  ||| ||||| |||| |||||||  |||| ||| ||||||||||||||  ||||||||||||||||| |||| |||||| ||||   ||    
T  33313045 tctgagagaaaaatggttaagtccttcgaatcctctgaagctctcctatggtaatttgctttcctaattcaatcaatgattatttagtttcacgacgaat 33312946  T
Q  437 taacaaagtaattatacccaatctctttaccta 469  Q
    ||||  ||||||| |||||||||| || |||||    
T  33312945 taacttagtaattctacccaatcttttgaccta 33312913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 458
Target Start/End: Complemental strand, 23108106 - 23107917
Alignment:
Q  271 cctaggcagttgagttgtt--ttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttgaat 367  Q
    ||||| ||||||||||| |  |||||||||||||| |   ||||||||||||| ||||||||| ||| |||| ||| || | || |||||||||| ||||    
T  23108106 cctagacagttgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaaatgtggttaagaccttcgaat 23108008  T
Q  368 cctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaat 458  Q
    | | ||||| ||| ||||||||||||||||||||| ||||| ||||| |||| |||||| || | ||||||||  ||||| | ||||||||    
T  23108007 catccgaagctctcctatggtaatttgcactcctagttcaaacaatgattatttagtttcacaacagattaacttagtaactctacccaat 23107917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 17857879 - 17857968
Alignment:
Q  141 atgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    |||||||| |||||||||||| ||||||| |||||||| ||||||  || ||||||| ||||||||||||||||||||||||||| ||||    
T  17857879 atgatagatatttggcaagtgtaccaaaagctatcgaaatagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaa 17857968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 38431757 - 38431669
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| |||||| ||||| ||||||| |||||||||||||||  || ||||||| || ||||||||||||||||||||||| |||||    
T  38431757 tgatagatatttggaaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccatgaggaccgttgttaatttctacttagcaa 38431669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 3540932 - 3541011
Alignment:
Q  150 atttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    |||||||||||| |||||||||||| |||||||||  || ||||||| ||||||||||||||| || ||||||| |||||    
T  3540932 atttggcaagtgtaccaaaactatcaaagtagtaataaagttcgtatccacgaggaccgttgtgaacttctacttagcaa 3541011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 150 - 229
Target Start/End: Complemental strand, 6964643 - 6964563
Alignment:
Q  150 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    |||||| ||||| ||||||| |||||||||||||||  || ||||||| ||||||| |||||||||||||||||| |||||    
T  6964643 atttggtaagtgtaccaaaaactatcgaagtagtaatgaagttcgtatccacgagggccgttgttaatttctacttagcaa 6964563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 28577687 - 28577761
Alignment:
Q  151 tttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactca 225  Q
    ||||||||||| |||||||||||||||| | |||  |||||| |||  ||||||||||||||||| |||||||||    
T  28577687 tttggcaagtgtaccaaaactatcgaagcaataatcaaattcatatctacgaggaccgttgttaacttctactca 28577761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 295008 - 294951
Alignment:
Q  241 aaaaaggatgta-taaatttatattgattgccctaggcagttgagttgttttgtaacataa 300  Q
    |||||||||||| ||||||||||||||| |||| |||||||  ||||||||||||||||||    
T  295008 aaaaaggatgtaataaatttatattgat-gcccgaggcagt--agttgttttgtaacataa 294951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 13496232 - 13495906
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 241  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||        ||||    
T  13496232 tgatagagatttgacaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atca 13496134  T
Q  242 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 341  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  13496133 aaaaggatgtataaatttatattgattgtcctaggcagttgaattgttttgtaacataaacgtaaataaaacaataaaagttgattttaagaatattaga 13496034  T
Q  342 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 441  Q
    || ||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |    
T  13496033 gagaagtatggttaagacctttgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctactttaacgacagattaaga 13495934  T
Q  442 aagtaattatacccaatctctttaccta 469  Q
    ||||||||||| |||||||||| |||||    
T  13495933 aagtaattatatccaatctcttgaccta 13495906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 13493508 - 13493181
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||        |||    
T  13493508 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atc 13493410  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  13493409 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 13493310  T
Q  341 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 440  Q
    ||| ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  13493309 agagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaac 13493210  T
Q  441 aaagtaattatacccaatctctttaccta 469  Q
    ||||||||| ||||||||||||| |||||    
T  13493209 aaagtaattctacccaatctcttgaccta 13493181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 10765165 - 10764838
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||        |||    
T  10765165 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atc 10765067  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  10765066 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 10764967  T
Q  341 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 440  Q
    ||| ||||||| |||||||||| |||||||  |||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  10764966 agagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaacttgcactcctaattcaagcaatgattatctagtttaacgacagattaac 10764867  T
Q  441 aaagtaattatacccaatctctttaccta 469  Q
    ||||||||| ||||||||||||| |||||    
T  10764866 aaagtaattctacccaatctcttgaccta 10764838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 142 - 469
Target Start/End: Original strand, 32505857 - 32506181
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttg----ttaatttctactcagcaannnnnnnn 237  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||  |||||| |||||||||| |||    |||| ||||||||  |||            
T  32505857 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtatccacgaggaccattgcatgttaacttctactcgacaatttcttt- 32505955  T
Q  238 atcaaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatat 337  Q
    |||||||||||||||||||||||||||||| ||   |||||||||     |||| ||||||||||| |   |||||||||||||||||||||||||||||    
T  32505956 atcaaaaaggatgtataaatttatattgat-gcgtgaggcagttg-----ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatat 32506049  T
Q  338 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 437  Q
    || ||| |||| || |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  32506050 tatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagatt 32506149  T
Q  438 aacaaagtaattatacccaatctctttaccta 469  Q
    |||||||||||| ||||||||||||| |||||    
T  32506150 aacaaagtaattctacccaatctcttgaccta 32506181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 39546486 - 39546161
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 241  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||  |||||| |||||||||| ||||||| || ||||||||||        |||     
T  39546486 tgatagagatttggcaagtgaaccaaaattattgaagtaataaataagatcgtat-cacgaggaccattgttaacttttactcagcaatttcatt-atcg 39546389  T
Q  242 aaaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 339  Q
    ||| |||||||| || ||  |||| ||||||||||||||||  |||  ||||||||| |||||| ||||||||||||||||||||||||||| |||||||    
T  39546388 aaa-ggatgtattaaattcaattg-ttgccctaggcagttggattggtttttgtaacgtaaacgcaaataaaacaataaaagttggttttaaaaatatta 39546291  T
Q  340 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaa 439  Q
     ||| ||||||| |||||||||| ||||||| |||||||||  |||||||||||||||||||||||||| ||||| ||||||||||| |||| |||||||    
T  39546290 gagagaagtatggttaagaccttcgaatcctccgaagttctcatatggtaatttgcactcctaattcaagcaatgattatctagtttcacgacagattaa 39546191  T
Q  440 caaagtaattatacccaatctctttaccta 469  Q
    |||||||| | ||||||||||||| |||||    
T  39546190 caaagtaactctacccaatctcttgaccta 39546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 268 - 468
Target Start/End: Complemental strand, 34066466 - 34066264
Alignment:
Q  268 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttg 364  Q
    |||||||||||||||| |||  |||||||||||||||| |   ||||||||||||| ||||||||| ||| |||| ||| ||||||| |||||||||| |    
T  34066466 tgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaagtatggttaagaccttcg 34066368  T
Q  365 aatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctcttt 464  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||     
T  34066367 aatcctccgaagttctcctatgataatttgcactcctaattcaatcaatgattatctagtttaacgatagattaacaaagtaattctacccaatctcttg 34066268  T
Q  465 acct 468  Q
    ||||    
T  34066267 acct 34066264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 142 - 463
Target Start/End: Original strand, 16190179 - 16190499
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 241  Q
    |||| |||||||| |||||||| |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| || ||  |||        |  |    
T  16190179 tgatggagatttgacaagtgaatcaaaactatcgaagtaataaataaattcgtatccacgaggactgttgttaatttttattcgacaaaaacgttaaa-a 16190277  T
Q  242 aaaaggatgtataaatttatattgattgccctaggcagttgagttgtt--ttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 339  Q
     ||||||||||| || ||  || |  ||||||||| | |||||||| |  |||||||||||||| |   |||||||||||  ||||||||| ||| ||||    
T  16190278 taaaggatgtattaaattcaatgg--tgccctaggaaattgagttgatgtttgtaacataaacgaattaaaaacaataaagattggtttta-gaaaatta 16190374  T
Q  340 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaa 439  Q
    |||| ||||||| |||||||||| ||||||| ||||||||| ||||| |||||||||||| |||||||| ||||| |||||||||||||||| | |||||    
T  16190375 aagagaagtatggttaagaccttcgaatcctccgaagttctcctatgataatttgcactcttaattcaagcaatgattatctagtttaacgacaaattaa 16190474  T
Q  440 caaagtaat-tatacccaatctctt 463  Q
    |||| |||| |||||||||||||||    
T  16190475 caaaataatatatacccaatctctt 16190499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 267 - 469
Target Start/End: Original strand, 27282230 - 27282434
Alignment:
Q  267 ttgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttg 364  Q
    ||||||||||||||||  |||  |||| |||  |||| |||||||||||||| ||| ||||||||| |||||||| ||| ||||||| ||||||| || |    
T  27282230 ttgccctaggcagttggattggtttttataaagtaaatgtaaataaaacaattaaaattggttttatgaatattagagagaagtatggttaagactttcg 27282329  T
Q  365 aatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctcttt 464  Q
    ||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||| |||||  |||||||||||||||| |||||||||||||     
T  27282330 aattctccgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagttcaacgaccgattaacaaagtaattctacccaatctcttg 27282429  T
Q  465 accta 469  Q
    |||||    
T  27282430 accta 27282434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 322 - 463
Target Start/End: Complemental strand, 1936691 - 1936551
Alignment:
Q  322 ttggttttaagaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatct 421  Q
    ||||||||| ||| |||| ||| ||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  1936691 ttggtttta-gaaaattagagagaagtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctagttcaatcaatgattatct 1936593  T
Q  422 agtttaacgatagattaacaaagtaattatacccaatctctt 463  Q
    || || |||| ||||||||||||||| | |||| ||||||||    
T  1936592 agcttcacgaaagattaacaaagtaactctaccaaatctctt 1936551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 336 - 469
Target Start/End: Complemental strand, 15297383 - 15297251
Alignment:
Q  336 attaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgataga 435  Q
    |||||||| || ||||||||||||||| ||||||| ||| ||||||| | |||||||||||| || |||||||||||| || |||||||||||||| |||    
T  15297383 attaaagagaaatatgattaagaccttcgaatcctccgatgttcttccacggtaatttgcacccc-aattcaatcaatattcatctagtttaacgacaga 15297285  T
Q  436 ttaacaaagtaattatacccaatctctttaccta 469  Q
    |||||||||||||| ||||||||||||| |||||    
T  15297284 ttaacaaagtaattctacccaatctcttgaccta 15297251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 355 - 469
Target Start/End: Original strand, 22456705 - 22456818
Alignment:
Q  355 aagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacc 454  Q
    |||||||| ||||||| ||||||||| |||||| |||||| || |||| |||||||||||||  ||||||||||||| ||| ||||||||||||| ||||    
T  22456705 aagaccttcgaatcctccgaagttctcctatggaaatttgtaccccta-ttcaatcaatgttcgtctagtttaacgacagactaacaaagtaattctacc 22456803  T
Q  455 caatctctttaccta 469  Q
    ||||||||| |||||    
T  22456804 caatctcttgaccta 22456818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 355 - 461
Target Start/End: Complemental strand, 49147930 - 49147825
Alignment:
Q  355 aagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacc 454  Q
    |||||||| ||||||| ||||||||| |||||| |||||| || |||| |||||||||||||  ||||||||||||| ||||||||||||||||| ||||    
T  49147930 aagaccttcgaatcctccgaagttctcctatggaaatttgtaccccta-ttcaatcaatgttcgtctagtttaacgacagattaacaaagtaattctacc 49147832  T
Q  455 caatctc 461  Q
    |||||||    
T  49147831 caatctc 49147825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 469
Target Start/End: Complemental strand, 21153295 - 21153174
Alignment:
Q  348 tatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaa 447  Q
    |||| |||||||||| ||||||| ||| | ||||  |||||||||||||| || ||||||||||||||| || ||||||||||| ||||||||| |||||    
T  21153295 tatggttaagaccttcgaatcctccgatgctcttaaatggtaatttgcacccccaattcaatcaatgttcatttagtttaacgacagattaacacagtaa 21153196  T
Q  448 ttatacccaatctctttaccta 469  Q
    || ||| ||||||||| |||||    
T  21153195 ttctactcaatctcttgaccta 21153174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 34552438 - 34552525
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  34552438 tgatagatatttgacaagtgtaccaaaactatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 34552525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 18392747 - 18392669
Alignment:
Q  152 ttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    |||||||||| ||||||| |||||||||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  18392747 ttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 18392669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 15297559 - 15297492
Alignment:
Q  155 gcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctac 222  Q
    ||||||| |||||||||||||||||||||||| ||||| ||| |||| ||||||||||||| ||||||    
T  15297559 gcaagtgtaccaaaactatcgaagtagtaaatgaattcatatccacggggaccgttgttaacttctac 15297492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 339
Target Start/End: Complemental strand, 8435357 - 8435284
Alignment:
Q  268 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 339  Q
    ||||||||||||||||||||  ||||||||||||||| |||  ||||||||||||||||||||| |||| ||||    
T  8435357 tgccctaggcagttgagttgatttttgtaacataaacataataaaaacaataaaagttggtttttagaaaatta 8435284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 49716735 - 49716647
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| | ||| |||||| ||||||| ||||||||||| |||  || ||||||| |||||||||||||||||||||||||| |||||    
T  49716735 tgatagataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 49716647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 49720192 - 49720129
Alignment:
Q  166 aaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||||||||||| |||  || ||||||| |||||||||||||||||||||||||| |||||    
T  49720192 aaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 49720129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 6206237 - 6206164
Alignment:
Q  150 atttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctact 223  Q
    |||| ||||||| || |||| ||||||||||||||  || ||||||| |||||| |||||||||||||||||||    
T  6206237 atttagcaagtgtactaaaattatcgaagtagtaataaagttcgtatccacgagaaccgttgttaatttctact 6206164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 422 - 469
Target Start/End: Original strand, 22453415 - 22453462
Alignment:
Q  422 agtttaacgatagattaacaaagtaattatacccaatctctttaccta 469  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||||    
T  22453415 agtttaacgacagattaacaaagtaattctacccaatctcttgaccta 22453462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 23990362 - 23990415
Alignment:
Q  416 ttatctagtttaacgatagattaacaaagtaattatacccaatctctttaccta 469  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||| ||| |||||    
T  23990362 ttatctagttcaacgacagattaacaaagtaattctacccaatcacttgaccta 23990415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 50196723 - 50196803
Alignment:
Q  150 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    |||||||||||| ||||||| |||| |||||| |||  ||||| |||| ||||||||||||||||||| || ||| |||||    
T  50196723 atttggcaagtgtaccaaaaactattgaagtaataataaaatttgtatccacgaggaccgttgttaatctcaacttagcaa 50196803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 35231251 - 35231149
Alignment:
Q  26 accaacaacaccgacaggctctcgatcaaagcttttatacttgaaataactcaaaacactaa----attacaatctttcttagacaaaagatgaagatga 121  Q
    |||||||||||| ||| | || | ||||| |||||||||||| |||| | |||||||| |||    ||||||||| |||| ||| ||||| |||||||||    
T  35231251 accaacaacaccaacaagttcactatcaatgcttttatacttaaaatcattcaaaacagtaacattattacaatcattctcagataaaagctgaagatga 35231152  T
Q  122 aga 124  Q
    |||    
T  35231151 aga 35231149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 196; Significance: 1e-106; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 150 - 469
Target Start/End: Original strand, 647211 - 647530
Alignment:
Q  150 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaaaaagga 248  Q
    |||||||||||| ||||||| |||||||||||||||  || || |||| ||||||||||||||||||||||||||| ||||        |||||||||||    
T  647211 atttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atcaaaaagga 647309  T
Q  249 tgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagt 348  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  647310 tgtataaatttatattgattgccctaggcatttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattagagagaagt 647409  T
Q  349 atgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaat 448  Q
    ||| |||||| ||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  647410 atggttaagatcttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagtaat 647509  T
Q  449 tatacccaatctctttaccta 469  Q
    | ||||||||||||| |||||    
T  647510 tctacccaatctcttgaccta 647530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 150 - 469
Target Start/End: Original strand, 650483 - 650802
Alignment:
Q  150 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaaaaagga 248  Q
    |||||||||||| ||||||| |||||||||||||||  || || |||| ||||||||||||||||||||||||||| ||||        |||||||||||    
T  650483 atttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctat-atcaaaaagga 650581  T
Q  249 tgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagt 348  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||    
T  650582 tgtataaatttatattgattgccctaggcatttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcataatattagagagaagt 650681  T
Q  349 atgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaat 448  Q
    ||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  650682 atggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagtaat 650781  T
Q  449 tatacccaatctctttaccta 469  Q
    | ||||||||||||| |||||    
T  650782 tctacccaatctcttgaccta 650802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 142 - 469
Target Start/End: Original strand, 26062690 - 26063020
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggacc--gttgttaatttctactcagcaannnnnnnnat 239  Q
    ||||| |||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||  |||||||| ||||||||| |||        ||    
T  26062690 tgataaagatttggcaagtgaaccaaaactatcgaaataataaataaattcgtatccacgaggaccccgttgttaacttctactcaacaatttcttt-at 26062788  T
Q  240 caaaaaggatgtataaatttatattgattgccctaggcagttgagttgtt--ttgtaacataaacgtaaataaaacaataaaagttggttttaagaatat 337  Q
    |||||||||||||| || ||  |  | |||||||||| |||||  ||| |  |||||| ||||||| |   ||||||||||||||| | ||| |||| ||    
T  26062789 caaaaaggatgtattaaattcaa--ggttgccctaggtagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaat 26062886  T
Q  338 taaagataa--gtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgataga 435  Q
    || ||| |   ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| |||    
T  26062887 tagagagagatgtatggttaagacctttgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctagttcaacgacaga 26062986  T
Q  436 ttaacaaagtaattatacccaatctctttaccta 469  Q
    |||||||||||| | ||||||||||||| |||||    
T  26062987 ttaacaaagtaactctacccaatctcttgaccta 26063020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 469
Target Start/End: Complemental strand, 26060622 - 26060506
Alignment:
Q  353 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattata 452  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||| ||  ||||||||||||||||||| | ||    
T  26060622 ttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagcttcccgatagattaacaaagtaactcta 26060523  T
Q  453 cccaatctctttaccta 469  Q
    ||||||||||| |||||    
T  26060522 cccaatctcttgaccta 26060506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 2542128 - 2541803
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||| ||||||  | ||||||||| ||||||| ||||||| ||||||||| ||  |||| ||||||| |||||        ||     
T  2542128 tgatagatatttggcaagtgtaccaaagtcaatcgaagtaataaataa-ttcgtatccacgaggactgtatttaacttctactgagcaatttcatt-att 2542031  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttt--tgtaacataaacgtaaataaaacaataaaagtt-ggttttaagaatat 337  Q
    ||||||||||||| || ||  || |  |||||||||||||||||||  ||  ||||||||||||| |   ||||||||||||  | ||||||  ||| ||    
T  2542030 aaaaaggatgtattaaattcaatgg--tgccctaggcagttgagtttattcttgtaacataaacggattaaaaacaataaaatataggttttttgaaaat 2541933  T
Q  338 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 437  Q
    ||||||   ||||| |||||||||| |||||||  ||||||||  |||||||||||| ||||||| ||||| ||||| |||||||||| ||||| |||||    
T  2541932 taaagag--gtatggttaagaccttcgaatcctctgaagttctcttatggtaatttgtactcctatttcaagcaatgattatctagttaaacgacagatt 2541835  T
Q  438 aacaaagtaattatacccaatctctttaccta 469  Q
    |||||||||||| || |||||||||| |||||    
T  2541834 aacaaagtaattttatccaatctcttgaccta 2541803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 15851539 - 15851450
Alignment:
Q  140 aatgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| |||||||||||||| |||||||||||||||||| ||   || ||||||| |||||||||||||||||||||||||| |||||    
T  15851539 aatgataaagatttggcaagtgtaccaaaactatcgaagtaatagtaaagttcgtatccacgaggaccgttgttaatttctacttagcaa 15851450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 12172218 - 12171901
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||||||||||  | ||||||||| |||| ||  |||| | ||||||||| ||  |||| ||||||| |||||        ||     
T  12172218 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaagatcgtttccacgaggactgtatttaacttctacttagcaatttcatt-att 12172120  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatatt 338  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||  ||||        
T  12172119 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagatttggtttctagaa---- 12172025  T
Q  339 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt-caatcaatgtttatctagtttaacgatagatt 437  Q
            ||||| ||||| |||| ||||| | ||||| ||  |||||||||||||||||||||| | ||||||||| |||| |||||| ||||  ||||    
T  12172024 --------gtatggttaagtccttggaatcttccgaagctcgcctatggtaatttgcactcctaaatacaatcaatgattatttagtttcacgacggatt 12171933  T
Q  438 aacaaagtaattatacccaatctctttaccta 469  Q
    |||  ||||||| ||||||||||||| |||||    
T  12171932 aacttagtaattctacccaatctcttgaccta 12171901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 19929242 - 19929155
Alignment:
Q  142 tgatagagatttggcaagtgaaccaa-aactatcgaagtagtaaataaat-tcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||| ||||| |||| | |||||||||||||||||||||||||| |||||    
T  19929242 tgatagatatttggcaagtgtaccaataactatcgaagtagtaa-taaatatcgt-tccacgaggaccgttgttaatttctacttagcaa 19929155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 21217350 - 21217418
Alignment:
Q  157 aagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactca 225  Q
    ||||| || ||||||||| ||||| |||  |||||||||||||||||||||||| ||||||||||||||    
T  21217350 aagtgtactaaaactatcaaagtaataataaaattcgtattcacgaggaccgttattaatttctactca 21217418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 33400075 - 33400163
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||  || ||||||| |||||| |||||||||||||||| || |||||    
T  33400075 tgatagatatttggcaagtgtaccaaaagctatcgaggtagtaataaagttcgtatccacgagaaccgttgttaatttctgcttagcaa 33400163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 11649329 - 11649393
Alignment:
Q  268 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggtttta 330  Q
    ||||||||||||||||||||  |||||||| ||||||| ||  ||||||||||||||||||||||    
T  11649329 tgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaataaaagttggtttta 11649393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 11649444 - 11649496
Alignment:
Q  353 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt 405  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||| |||||    
T  11649444 ttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcataatt 11649496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 26060732 - 26060668
Alignment:
Q  268 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggtttta 330  Q
    |||||||||||| |||||||  |||||||| ||||| | ||  ||||||||||||||||||||||    
T  26060732 tgccctaggcaggtgagttgatttttgtaatataaatgaaataaaaacaataaaagttggtttta 26060668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 1e-79; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 142 - 469
Target Start/End: Original strand, 23673345 - 23673671
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 241  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||        ||||    
T  23673345 tgatagagatttggcaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcaacaatttcttt-atca 23673443  T
Q  242 aaaaggatgtataaatttatattgattgccctaggcagttgagttgt--tttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 339  Q
    |||||||||||| || ||  |  | ||||||||||||||||  |||   ||||||| ||||||| |   ||||||||||||||| | ||| |||| ||||    
T  23673444 aaaaggatgtattaaattcaa--ggttgccctaggcagttggattggcatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaatta 23673541  T
Q  340 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaa 439  Q
     ||| | ||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||    
T  23673542 gagagatgtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctagtttaacgacaaattaa 23673641  T
Q  440 caaagtaattatacccaatctctttaccta 469  Q
    |||||||||| ||||||||||||| |||||    
T  23673642 caaagtaattctacccaatctcttgaccta 23673671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 141 - 469
Target Start/End: Complemental strand, 36327172 - 36326845
Alignment:
Q  141 atgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||        |||    
T  36327172 atgatagatatttggcaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactctgcaatttcttt-atc 36327074  T
Q  241 aaaaaggatgtat-aaatttatattgattgccctaggcagtt-gagttgt-tttgtaacataaacgtaaataaaacaataaaagttggttttaagaatat 337  Q
    ||||| ||||||| ||||| | | |   ||||||||| |||| || | || ||||||| ||||||| |   ||||||||||||||| | ||| |||| ||    
T  36327073 aaaaaagatgtattaaattcaaagt---tgccctaggaagttagattggtatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaat 36326977  T
Q  338 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 437  Q
    || ||| | ||||| |||||||||||||||||| |||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  36326976 tagagagatgtatggttaagacctttgaatcctccgaagttctcatatggtaatttgcactcctaattcaagcaatgattatctaatttaacgatagatt 36326877  T
Q  438 aacaaagtaattatacccaatctctttaccta 469  Q
    |||||||||||| ||||||||||||| |||||    
T  36326876 aacaaagtaattctacccaatctcttgaccta 36326845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 140 - 469
Target Start/End: Complemental strand, 16295145 - 16294817
Alignment:
Q  140 aatgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnat 239  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  ||  || ||||||||||||||||||||||||||||||||        ||    
T  16295145 aatgatagagatttggcaagtgaaccaaaactatcgaagtaataaataagatcaaatccacgaggaccgttgttaatttctactcagcaa-tttcgttat 16295047  T
Q  240 caaaaaggatgtat-aaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaac-aataaaagttggttttaagaata 336  Q
    |  ||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| |||||||  |   ||||| ||||||  || ||||| |||| |    
T  16295046 c-gaaaggatgtataaaatttatattga-tgccctaggcagttgagttgattttgtatcataaaccgattaaaaacaaataaagattagttttcagaaaa 16294949  T
Q  337 ttaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagat 436  Q
    ||  ||| ||||||| ||||| |||| ||||||| ||||||||| ||||||||||||||||||||| || |||||||| |||| |||||| |||| ||||    
T  16294948 tt-gagagaagtatggttaagtccttcgaatcctccgaagttctcctatggtaatttgcactcctagtttaatcaatgattatttagtttcacgacagat 16294850  T
Q  437 taacaaagtaattatacccaatctctttaccta 469  Q
    ||||  ||||||| ||||||||||||| |||||    
T  16294849 taacttagtaattctacccaatctcttgaccta 16294817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 142 - 469
Target Start/End: Original strand, 32575685 - 32576013
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 241  Q
    ||||||| |||||||||||||||||| ||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| | |        || |    
T  32575685 tgatagatatttggcaagtgaaccaacactattgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcaacgatttcgtt-ataa 32575783  T
Q  242 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttg-taacataaacgtaaataaaacaataaaagttggttttaagaatattaa 340  Q
     ||| ||||||| || ||  |||| || |||||||||||||  |||||||  |||  ||||||||||||||||||||||||||||||||||||||||||     
T  32575784 taaatgatgtattaaattcaattg-ttaccctaggcagttggattgtttttataaagtaaacgtaaataaaacaataaaagttggttttaagaatattag 32575882  T
Q  341 agata--agtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatta 438  Q
    ||| |  |||||| |||||||||| ||||||| ||||| ||| ||||| ||||||||||||||| |||||  |||| |||| |||||| |||| ||||||    
T  32575883 agaaagaagtatggttaagaccttcgaatcctccgaagctctcctatgataatttgcactcctagttcaaaaaatgattatttagtttcacgacagatta 32575982  T
Q  439 acaaagtaattatacccaatctctttaccta 469  Q
    ||  ||||| | |||| |||| ||| |||||    
T  32575983 acttagtaactctaccaaatcccttgaccta 32576013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 419
Target Start/End: Complemental strand, 40018126 - 40017948
Alignment:
Q  241 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 339  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| |   |||||||||| ||   | |||||||| | |     
T  40018126 aaaaaggatgtataaaatttatattgat-gccctaggcagttgagttgatttgtaacataaacggattaaaaacaataagagactggtttaagaaaaatt 40018028  T
Q  340 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttat 419  Q
     ||| ||||||| |||||||||| ||||||| ||||  ||| ||||||||||||||||||||||||||| ||||| ||||    
T  40018027 gagagaagtatggttaagaccttcgaatcctccgaaactctcctatggtaatttgcactcctaattcaaccaatgattat 40017948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 241 - 469
Target Start/End: Complemental strand, 31626698 - 31626468
Alignment:
Q  241 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaac-aataaaag-ttggttttaagaata 336  Q
    ||||||||||| |||| ||||||||| | ||||||||||||||||||| |||||||||||||| | || |||||  |||||| | ||||||||| ||| |    
T  31626698 aaaaaggatgtgtaaaatttatattggt-gccctaggcagttgagttgattttgtaacataaaaggaattaaaaataataaaggattggtttta-gaaaa 31626601  T
Q  337 ttaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagat 436  Q
    |   ||| ||| ||| ||||| | || ||||||| ||||| ||| ||||||||||||||||||||||||||||||||  |||| |||||| |||| ||||    
T  31626600 tctgagagaagaatggttaagtcattcgaatcctccgaagctctcctatggtaatttgcactcctaattcaatcaattattatttagtttcacgacagat 31626501  T
Q  437 taacaaagtaattatacccaatctctttaccta 469  Q
    ||||  ||||||| ||||||||||||| |||||    
T  31626500 taacttagtaattctacccaatctcttgaccta 31626468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 31528635 - 31528307
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||||||||||  | ||||||||| |||| ||||| || | ||||||||| ||  |||| ||||||| |||||        ||     
T  31528635 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaatttgtttccacgaggactgtatttaacttctacttagcaatttcatt-att 31528538  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttt-aagaatat 337  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| ||||| ||    
T  31528537 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 31528439  T
Q  338 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt-caatcaatgtttatctagtttaacgatagat 436  Q
    | | || ||||||| ||||| |||| |||||||   ||| ||| || ||||||||||||||||||| | | ||||||| |||| |||||| |||| ||||    
T  31528438 tga-gagaagtatggttaagtccttcgaatcctctaaagctctcctgtggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacagat 31528340  T
Q  437 taacaaagtaattatacccaatctctttaccta 469  Q
    ||||  ||||||| ||||||||||||| |||||    
T  31528339 taacttagtaattctacccaatctcttgaccta 31528307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 463
Target Start/End: Complemental strand, 13710218 - 13709995
Alignment:
Q  241 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatatt 338  Q
    |||||||||||||||| ||||||||||| |||  ||| ||||||||||  |||||||||||||| |   ||||||||||||| ||||||||| ||| |||    
T  13710218 aaaaaggatgtataaaatttatattgat-gcctgaggaagttgagttgagttgtaacataaacggattaaaaacaataaaagattggtttta-gaaaatt 13710121  T
Q  339 aaagataagtatgattaagacctttgaatcctacgaa-gttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 437  Q
      ||| ||||||| ||||||||||  |||| |  ||| | ||| ||||| |||||||||||||||||| |  ||||| |||||||||| ||| | |||||    
T  13710120 tgagagaagtatggttaagaccttcaaatcatctgaaagctctcctatgataatttgcactcctaatttaggcaatgattatctagttcaacaacagatt 13710021  T
Q  438 aacaaagtaattatacccaatctctt 463  Q
    |||||||||||| ||||| |||||||    
T  13710020 aacaaagtaattctacccgatctctt 13709995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 24384925 - 24385014
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaa--taaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||  ||||||||||||||||| ||| ||| |||||||||||| |||||    
T  24384925 tgatagatatttggcaagtgtaccaaaactatcgaagtaataaaattaaattcgtattcacgatgactgttattaatttctacttagcaa 24385014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 29436088 - 29436025
Alignment:
Q  166 aaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||||||||||| |||  || ||||||| |||||||||||||||||||||||||| |||||    
T  29436088 aaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 29436025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 38315809 - 38315876
Alignment:
Q  150 atttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatt 217  Q
    |||||| ||||| | ||||||||||||||||||||  || ||||||| ||||||||||||||||||||    
T  38315809 atttggtaagtgtatcaaaactatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatt 38315876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 1503204 - 1503256
Alignment:
Q  155 gcaagtgaaccaaaactatcgaagtagtaaa-taaattcgtattcacgaggac 206  Q
    ||||||| || ||||||||||||||| |||| ||||||||||| |||||||||    
T  1503204 gcaagtgtactaaaactatcgaagtaataaaataaattcgtatccacgaggac 1503256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 1506408 - 1506460
Alignment:
Q  155 gcaagtgaaccaaaactatcgaagtagtaaa-taaattcgtattcacgaggac 206  Q
    ||||||| || ||||||||||||||| |||| ||||||||||| |||||||||    
T  1506408 gcaagtgtactaaaactatcgaagtaataaaataaattcgtatccacgaggac 1506460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 469
Target Start/End: Complemental strand, 8427259 - 8427144
Alignment:
Q  353 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattata 452  Q
    ||||||| || ||||| | ||| |||||| | ||||||||||||| |||  |||||||||||| | ||||||||||| | ||||||| ||| |  || ||    
T  8427259 ttaagacattcgaatcatccgatgttcttatttggtaatttgcacccctg-ttcaatcaatgtctttctagtttaacaacagattaataaaatggttcta 8427161  T
Q  453 cccaatctctttaccta 469  Q
    | ||||||||| |||||    
T  8427160 ctcaatctcttgaccta 8427144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 13572070 - 13572118
Alignment:
Q  170 ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaattt 218  Q
    |||||||||||||||  || |||||||  ||||||||||||||||||||    
T  13572070 ctatcgaagtagtaataaagttcgtatctacgaggaccgttgttaattt 13572118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 5e-57; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 142 - 469
Target Start/End: Complemental strand, 13979730 - 13979405
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 241  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||| || ||||||||| | ||||||||||||||||||||        |||     
T  13979730 tgatagagatttggcaagtgaaccaaaactatcgaagtaataaataaaatcgaatccacgaggactgctgttaatttctactcagcaatttcttt-atcg 13979632  T
Q  242 aaaaggatgtataaatttatat-tgattgccctaggcagttgagttgttttg--taacataaacgtaaataaaacaataaaagttggttttaagaatatt 338  Q
    ||| |||||||| ||   |||| || |||||| |||||||||  ||| |||   |||  |||||||||||||||||||||||||||||||||||||||||    
T  13979631 aaa-ggatgtattaa---atatctggttgcccaaggcagttggattggttttaataaagtaaacgtaaataaaacaataaaagttggttttaagaatatt 13979536  T
Q  339 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatta 438  Q
    | ||| ||||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||| | ||||| ||||| |||| |||||| | || ||||||    
T  13979535 agagagaagtatggttaagacctttgaatcctccgaagctctcctatggtaatttgcactccaagttcaaacaatgattatttagtttcatgacagatta 13979436  T
Q  439 acaaagtaattatacccaatctctttaccta 469  Q
    ||  ||||| | || |||||| ||| |||||    
T  13979435 acttagtaactctatccaatcccttgaccta 13979405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 353 - 468
Target Start/End: Complemental strand, 46731529 - 46731414
Alignment:
Q  353 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattata 452  Q
    |||||||||| ||||||| |||||||||  |||||||||||||||||||||||||||||||| |||||||||| ||||| | ||||||||||||| | ||    
T  46731529 ttaagaccttcgaatcctccgaagttctcatatggtaatttgcactcctaattcaatcaatgattatctagttcaacgacatattaacaaagtaactcta 46731430  T
Q  453 cccaatctctttacct 468  Q
    ||||||||||| ||||    
T  46731429 cccaatctcttgacct 46731414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 241 - 469
Target Start/End: Original strand, 39563607 - 39563837
Alignment:
Q  241 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaa-taaaag-ttggttttaagaata 336  Q
    ||||||||||| |||| |||||||| | |||||||||||||||||||| |||||||||||||||  || |||||  | |||||| ||||||||| ||| |    
T  39563607 aaaaaggatgtgtaaaatttatatt-agtgccctaggcagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagattggtttta-gaaaa 39563704  T
Q  337 ttaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagat 436  Q
    |   ||| ||| ||| ||||| |||| ||||||| ||| | ||| ||||| ||||||||||||||||||||||||||| |||| |||||| |||| ||||    
T  39563705 tctgagagaagaatggttaagtccttcgaatcctccgacgctctcctatgataatttgcactcctaattcaatcaatggttatttagtttcacgacagat 39563804  T
Q  437 taacaaagtaattatacccaatctctttaccta 469  Q
    ||||  ||||||| ||||||||||||| |||||    
T  39563805 taacttagtaattctacccaatctcttgaccta 39563837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 46731699 - 46731612
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||||||||||||||||||| ||||||||||||||| | |||||||| |||| |||||||||||||||||| |||||||||||||    
T  46731699 tgatagagatttggcaagtgaacaaaaactatcgaagtaatgaataaatttgtatccacgaggaccgttgttaacttctactcagcaa 46731612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 142 - 469
Target Start/End: Original strand, 22626312 - 22626638
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||||||||||  | ||||||||| |||| || ||||| | ||||||||| ||  |||| ||||||| |||||        ||     
T  22626312 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aagttcgtttccacgaggactgtatttaacttctacttagcaatttcatt-att 22626409  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatatt 338  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||| |||| ||| |||    
T  22626410 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggattta-gaaaatt 22626507  T
Q  339 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 437  Q
     | || ||||||| ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| ||| | ||||||| |||| |||||| ||||  ||||    
T  22626508 ga-gagaagtatggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggatt 22626606  T
Q  438 aacaaagtaattatacccaatctctttaccta 469  Q
    |||  ||||||| || |||||||||| |||||    
T  22626607 aacttagtaattctatccaatctcttgaccta 22626638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 142 - 469
Target Start/End: Original strand, 11138570 - 11138896
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||||||||||  | ||||||||| |||| || ||||| | ||||||||| ||  |||| ||||||| |||||        ||     
T  11138570 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aagttcgtttccacgaggactgtatttaacttctacttagcaatttcatt-att 11138667  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatatt 338  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||| | | |||| || | ||| |||    
T  11138668 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaatatagaattggattca-gaaaatt 11138765  T
Q  339 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 437  Q
     | || ||||||| ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| ||| | ||||||| |||| |||||| ||||  ||||    
T  11138766 ga-gagaagtatggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggatt 11138864  T
Q  438 aacaaagtaattatacccaatctctttaccta 469  Q
    |||  ||||||| || |||||||||| |||||    
T  11138865 aacttagtaattctatccaatctcttgaccta 11138896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 469
Target Start/End: Complemental strand, 47412222 - 47412101
Alignment:
Q  348 tatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaa 447  Q
    |||||||||||||||||||||||   | ||||||||| |||||||||||| |  ||||||||||||||| ||||| |||||| | |||||||||   |||    
T  47412222 tatgattaagacctttgaatcctctaatgttcttctacggtaatttgcacccacaattcaatcaatgttcatctaatttaacaacagattaacacgataa 47412123  T
Q  448 ttatacccaatctctttaccta 469  Q
    || ||| ||||||||| |||||    
T  47412122 ttctactcaatctcttgaccta 47412101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 27055237 - 27055149
Alignment:
Q  141 atgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    |||||| | ||||||||||   ||||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  27055237 atgataaatatttggcaagcataccaaaactatcgaagtagtaataaatttcgtatccacgaggaccgttgttaatttctacttagcaa 27055149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 19869343 - 19869255
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| |||||||||||| || |||| ||||| |||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  19869343 tgatagatatttggcaagtgtactaaaatctatcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 19869255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 26822039 - 26822122
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactca 225  Q
    |||||||  ||||| ||||| |||||||||||||||||| |||  |||||||||| ||| ||||||| ||||||||| ||||||    
T  26822039 tgatagacttttggaaagtgtaccaaaactatcgaagtaataataaaattcgtatccacaaggaccgctgttaatttttactca 26822122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 268 - 339
Target Start/End: Complemental strand, 50096902 - 50096829
Alignment:
Q  268 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 339  Q
    ||||||| ||||||||||||  |||||||||||||||||||  |||||| |||||||||||||| |||| ||||    
T  50096902 tgccctaagcagttgagttgatttttgtaacataaacgtaataaaaacagtaaaagttggtttttagaaaatta 50096829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 469
Target Start/End: Complemental strand, 35366387 - 35366295
Alignment:
Q  376 gttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctttaccta 469  Q
    ||||||||| |||||||||||| || ||||||||||||||| || || |||||||| | ||||||||  ||||| ||| ||||||||| |||||    
T  35366387 gttcttctacggtaatttgcacccc-aattcaatcaatgttcatataatttaacgacaaattaacaagataattctactcaatctcttgaccta 35366295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 25492263 - 25492175
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| | ||| |||||| ||||||| ||||| || ||||||  || ||||||| |||||||| ||||||||||||||||| |||||    
T  25492263 tgatagataattgacaagtgtaccaaaagctatcaaaatagtaataaagttcgtatccacgaggatcgttgttaatttctacttagcaa 25492175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 20536459 - 20536520
Alignment:
Q  268 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttt 328  Q
    ||||||||||||||| ||||  || ||||||| |||||||| |||||||||||||||||||||    
T  20536459 tgccctaggcagttgggttgacttgtgtaacacaaacgtaa-taaaacaataaaagttggttt 20536520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 3306213 - 3306147
Alignment:
Q  142 tgatagagatttggcaagtgaaccaa-aactatcgaagtagtaaa-taaattcgtattcacgaggac 206  Q
    ||||||| |||||||||||| ||||| ||||||||||||| |||| ||| ||||||| |||||||||    
T  3306213 tgatagatatttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggac 3306147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 30157797 - 30157863
Alignment:
Q  142 tgatagagatttggcaagtgaaccaa-aactatcgaagtagtaaa-taaattcgtattcacgaggac 206  Q
    ||||||| |||||||||||| ||||| ||||||||||||| |||| ||| ||||||| |||||||||    
T  30157797 tgatagaaatttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggac 30157863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 4225619 - 4225659
Alignment:
Q  144 atagagatttggcaagtgaaccaaaactatcgaagtagtaa 184  Q
    ||||| |||||||||||| ||||| ||||||||||||||||    
T  4225619 atagatatttggcaagtgtaccaatactatcgaagtagtaa 4225659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 18883561 - 18883509
Alignment:
Q  155 gcaagtgaaccaaaactatcgaagtagtaaa-taaattcgtattcacgaggac 206  Q
    ||||||| || ||||||||| |||||||||| ||| |||||||||||||||||    
T  18883561 gcaagtgtactaaaactatcaaagtagtaaaataagttcgtattcacgaggac 18883509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 185
Target Start/End: Original strand, 32366879 - 32366927
Alignment:
Q  138 ctaatgatagagatttggcaagtgaaccaaa-actatcgaagtagtaaa 185  Q
    |||||||||||  ||||||||||| |||||| |||||||||||||||||    
T  32366879 ctaatgatagaattttggcaagtgtaccaaatactatcgaagtagtaaa 32366927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 3e-46; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 150 - 463
Target Start/End: Original strand, 12575308 - 12575620
Alignment:
Q  150 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaaaaagga 248  Q
    |||||||||||| ||||||  | ||||||||| ||||||| ||||||| ||||||||| |||||||| ||||||||| |||        || ||||||||    
T  12575308 atttggcaagtgtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggactgttgttaacttctactcaacaagttcatt-attaaaaagga 12575405  T
Q  249 tgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagata 345  Q
    ||||| || ||  || |  ||||||||||||||||||||  ||||||||||||||   |   ||||||||||||| |||||||| |||| |||| ||| |    
T  12575406 tgtattaaattcaatgg--tgccctaggcagttgagttgatttttgtaacataaattgattaaaaacaataaaagattggtttt-agaaaattagagaga 12575502  T
Q  346 agtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagt 445  Q
    |||||| |||||||| ||||||||| ||||||| |  |||||||||||||||||||||||||| ||||| | |||||||||||||| |||||||||||||    
T  12575503 agtatggttaagaccattgaatcctccgaagttttcttatggtaatttgcactcctaattcaagcaatgataatctagtttaacgacagattaacaaagt 12575602  T
Q  446 aattatacccaatctctt 463  Q
    |||| |||| ||||||||    
T  12575603 aattctacctaatctctt 12575620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 142 - 408
Target Start/End: Complemental strand, 14418707 - 14418445
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 241  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||| | | ||| |||||        ||||    
T  14418707 tgatagatttttggcaagtgaaccaaagctatcgaagtagtaaataa-ttcgt-tccacgaggaccgttgttaactacaacttagcaatttcttt-atca 14418611  T
Q  242 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 341  Q
    |||||||| | | || ||  || | ||||||||||||||||||||| ||| ||||||||||  |   ||||||||||||||||||||||||||||||| |    
T  14418610 aaaaggatatgttaaattcaatgg-ttgccctaggcagttgagttggtttttaacataaacaaattaaaaacaataaaagttggttttaagaatattaga 14418512  T
Q  342 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaa 408  Q
    || ||||||| ||||||| || ||||||| |||| |||| ||||| |||||||||||||||||||||    
T  14418511 gagaagtatggttaagacattcgaatcctccgaatttctcctatgataatttgcactcctaattcaa 14418445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 268 - 469
Target Start/End: Original strand, 41778866 - 41779068
Alignment:
Q  268 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttga 365  Q
    |||||||||||||||| |||  |||||||||||||||| |   ||||||||||||| | | |||| ||| |||||||| ||||||| ||||||||||  |    
T  41778866 tgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattgattta-gaagattaaagagaagtatggttaagaccttcaa 41778964  T
Q  366 atcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctcttta 465  Q
    ||| | ||||||||| ||||| |||||||||||  |||||||| ||||| |||||||| || |||| ||||||||| | ||| | ||||||||||||| |    
T  41778965 atcttccgaagttctcctatgctaatttgcactagtaattcaaacaatgattatctaggttcacgacagattaacacaataactctacccaatctcttga 41779064  T
Q  466 ccta 469  Q
    ||||    
T  41779065 ccta 41779068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 309 - 463
Target Start/End: Complemental strand, 13097099 - 13096946
Alignment:
Q  309 aaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattca 407  Q
    ||||||||||||| || |||||| ||| |||| ||| ||||||| |||||||||| ||||||| ||||||| | ||||| |||||||||||||||||| |    
T  13097099 aaaacaataaaagattagtttta-gaaaattagagagaagtatggttaagaccttcgaatcctccgaagttatcctatg-taatttgcactcctaattta 13097002  T
Q  408 atcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 463  Q
    | ||||| |||||||||| || || ||||||||||||||||| |||||||||||||    
T  13097001 agcaatgattatctagttcaatgaaagattaacaaagtaattctacccaatctctt 13096946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 39659712 - 39659799
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||  || ||||||| |||||||||| ||||||||||||||| |||||    
T  39659712 tgatagatatttggcaagtgtaccgaaactatcgaagtagtaataaagttcgtatccacgaggaccattgttaatttctacttagcaa 39659799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 9467429 - 9467341
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||| || |||||    
T  9467429 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttcttcttagcaa 9467341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 453951 - 453863
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| ||||| |||||| ||||||| |||| |||||| |||  || ||||||| |||||||||||||||||||||||||| |||||    
T  453951 tgatagatatttgacaagtgtaccaaaaactatggaagtactaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 453863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 41836318 - 41836382
Alignment:
Q  268 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggtttta 330  Q
    ||||||||||||||||||||  |||||||| ||||||| ||  ||||||||||||||||||||||    
T  41836318 tgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaataaaagttggtttta 41836382  T

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Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 41836433 - 41836485
Alignment:
Q  353 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt 405  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||| |||||    
T  41836433 ttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcataatt 41836485  T

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Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 438
Target Start/End: Complemental strand, 44008335 - 44008245
Alignment:
Q  348 tatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatta 438  Q
    |||| ||| |||||| ||||||| ||||| ||  || ||||||| |||||||||| ||||| ||||| |||| |||||| |||||||||||    
T  44008335 tatggttatgaccttcgaatcctccgaagctcgcctttggtaatctgcactcctagttcaaacaatgattatttagtttcacgatagatta 44008245  T

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Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 13332429 - 13332365
Alignment:
Q  165 caaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||||||||||||||||  || || |||| || |||||||||||||||||| |||| |||||    
T  13332429 caaaactatcgaagtagtaataaagtttgtatccatgaggaccgttgttaatttatacttagcaa 13332365  T

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Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 22173710 - 22173744
Alignment:
Q  151 tttggcaagtgaaccaaaactatcgaagtagtaaa 185  Q
    ||||||||||| |||||||||||||||||||||||    
T  22173710 tttggcaagtgtaccaaaactatcgaagtagtaaa 22173744  T

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Target: scaffold0363 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 142 - 408
Target Start/End: Original strand, 11 - 273
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 241  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||| | | ||| |||||        ||||    
T  11 tgatagatttttggcaagtgaaccaaagctatcgaagtagtaaataa-ttcgt-tccacgaggaccgttgttaactacaacttagcaatttcttt-atca 107  T
Q  242 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 341  Q
    |||||||| | | || ||  || | ||||||||||||||||||||| ||| ||||||||||  |   ||||||||||||||||||||||||||||||| |    
T  108 aaaaggatatgttaaattcaatgg-ttgccctaggcagttgagttggtttttaacataaacaaattaaaaacaataaaagttggttttaagaatattaga 206  T
Q  342 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaa 408  Q
    || ||||||| ||||||| || ||||||| |||| |||| ||||| |||||||||||||||||||||    
T  207 gagaagtatggttaagacattcgaatcctccgaatttctcctatgataatttgcactcctaattcaa 273  T

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Target: scaffold0440 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 469
Target Start/End: Complemental strand, 10010 - 9781
Alignment:
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatatt 338  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| |||| |||    
T  10010 aaaaaggatgtataaatttatattggtc-ccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaataattggtttttagaaaatt 9912  T
Q  339 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 437  Q
     | || ||||||| ||||| |||| ||||||| ||||| ||| |||||| ||||||||||||| ||| ||||||||| |||| |||||| ||||  ||||    
T  9911 ga-gagaagtatggttaagtccttcgaatcctccgaagctctcctatggcaatttgcactcctaaatacaatcaatgattatttagtttcacgacggatt 9813  T
Q  438 aacaaagtaattatacccaatctctttaccta 469  Q
    |||  ||||||| ||||||||||||| |||||    
T  9812 aacttagtaattctacccaatctcttgaccta 9781  T

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Target: scaffold0567 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 331 - 463
Target Start/End: Original strand, 5999 - 6131
Alignment:
Q  331 agaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacg 430  Q
    |||| |||| ||| ||||||| |||||||||| ||||||| ||| ||||| ||||||||||||||||| ||||||||| ||||| |||||||| || |||    
T  5999 agaaaattagagagaagtatggttaagaccttcgaatcctccgaggttctcctatggtaatttgcactactaattcaaacaatgattatctaggttcacg 6098  T
Q  431 atagattaacaaagtaattatacccaatctctt 463  Q
    | ||||||||| | ||| | |||||||||||||    
T  6099 acagattaacacaataactctacccaatctctt 6131  T

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Target: scaffold0352 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 353 - 469
Target Start/End: Original strand, 2814 - 2930
Alignment:
Q  353 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattata 452  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||| |||| |||||| |||| |||||||   ||||||| ||    
T  2814 ttaagacctttgaatcctccgaagctctcctatggtaatttgcactcctagttcaatcaatgattatatagtttcacgaaagattaaggtagtaattcta 2913  T
Q  453 cccaatctctttaccta 469  Q
    || |||||||| |||||    
T  2914 ccaaatctcttgaccta 2930  T

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Target: scaffold0352; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 2619 - 2706
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||  |||||| |||||||||||||||||| |||||||||||||    
T  2619 tgatggagatttggcaagtggaccaaaactatcgaagtaataaataagatcgtatccacgaggaccgttgttaacttctactcagcaa 2706  T

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Target: scaffold0264 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 142 - 469
Target Start/End: Original strand, 24185 - 24510
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 240  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||| |||||| || | ||||||||| ||  |||| ||||||||| |||        ||     
T  24185 tgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaa-taaatttgtttccacgaggactgtatttaacttctactcaacaatttcatt-att 24282  T
Q  241 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatatt 338  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||||| ||| ||||  |||||  |   ||||||||||| | |||||||| |||| |||    
T  24283 aaaaaggatgtataaattattattggt-gccctaggcagttgagttgatttagtaa--taaactgattaaaaacaataaagaattggtttttagaaaatt 24379  T
Q  339 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 437  Q
     | || ||| ||| ||||| |||| ||||||| ||||| ||| |||||||||||||||||||| ||| |||| |||| |||| |||| | ||||  ||||    
T  24380 ga-gagaagcatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcctaaatacaataaatgattatttagtatcacgacggatt 24478  T
Q  438 aacaaagtaattatacccaatctctttaccta 469  Q
    |||  ||||||| ||||||||||||| |||||    
T  24479 aacttagtaattctacccaatctcttgaccta 24510  T

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Target: scaffold0068 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 33730 - 33817
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||| |||||||||||| ||||||||||||||||||||||  || || |||| |||||||||||||||||||||||||| |||||    
T  33730 tgatagatatttggcaagtgtaccaaaactatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaa 33817  T

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Target: scaffold0273 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 19517 - 19596
Alignment:
Q  150 atttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    |||||||||||| ||||||||| || |||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  19517 atttggcaagtgtaccaaaactgtcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 19596  T

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Target: scaffold0063 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 463
Target Start/End: Original strand, 7232 - 7313
Alignment:
Q  382 ctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 463  Q
    ||||||||||||| ||||||||||||||||||| |||| |||||| |||| ||||||||  ||||||| ||  |||||||||    
T  7232 ctatggtaatttgtactcctaattcaatcaatgattatttagtttcacgacagattaacttagtaattctattcaatctctt 7313  T

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Target: scaffold0500 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 440
Target Start/End: Complemental strand, 2699 - 2641
Alignment:
Q  382 ctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 440  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||| |||| ||||||||    
T  2699 ctatggtaacttgcactcctaattcaatcaatgattatttagtttcacgacagattaac 2641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 3739 - 3664
Alignment:
Q  151 tttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 229  Q
    ||||||||||| |||||  ||||||||||| ||||   ||| |||| |||||||||||||||||| |||||||||||||    
T  3739 tttggcaagtgtaccaattctatcgaagtaataaa---atttgtatccacgaggaccgttgttaacttctactcagcaa 3664  T

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Target: scaffold0084 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 19636 - 19593
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaa 185  Q
    |||||||  ||||||||||| |||||||||||||||||||||||    
T  19636 tgatagatttttggcaagtgtaccaaaactatcgaagtagtaaa 19593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 29715 - 29672
Alignment:
Q  142 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaa 185  Q
    |||||||  ||||||||||| |||||||||||||||||||||||    
T  29715 tgatagatttttggcaagtgtaccaaaactatcgaagtagtaaa 29672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 14094 - 14128
Alignment:
Q  151 tttggcaagtgaaccaaaactatcgaagtagtaaa 185  Q
    ||||||||||| |||||||||||||||||||||||    
T  14094 tttggcaagtgtaccaaaactatcgaagtagtaaa 14128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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