View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19927_high_58 (Length: 350)
Name: NF19927_high_58
Description: NF19927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19927_high_58 |
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Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 18 - 336
Target Start/End: Original strand, 49006557 - 49006875
Alignment:
| Q |
18 |
cttaagtcaacaaagttggtacttagccaccctttcctcactacttgacattacttctaacaacgaccagttgaactatatattttctccaaaactcaca |
117 |
Q |
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| T |
49006557 |
cttaagtcaacaaagttggtacttagccaccctttcctcactacttgacattacttctaacaacgaccagttgagctatatattttctccaaaactcaca |
49006656 |
T |
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| Q |
118 |
tatacctacactaatgtcatgaatggtttcagcgcaagtttgtctcctttagagcttaaagctctgaaaaccactcccggatatatttcatccataaggg |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
49006657 |
tatacctacactaatgtcatgaatggtttcagcgcaagtttgtctcctttaaagcttgaagctctgaaaaccactcccggatatatttcatccataaggg |
49006756 |
T |
|
| Q |
218 |
atttacctatcaaaccagacacaacgcactcacctcacttcattggcctcaatcctgttttcggaacatggcctacaacacaatatggaaaaaacgtcat |
317 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
49006757 |
atttacctatcaaaccagacacaacacactcacctcacttcattggcctcaatcctgttttcggaacatggcctacaacacaatatggaaaaaacatcat |
49006856 |
T |
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| Q |
318 |
cattggtttaattgacagt |
336 |
Q |
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||||||||||||||||||| |
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| T |
49006857 |
cattggtttaattgacagt |
49006875 |
T |
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