View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19927_high_63 (Length: 341)
Name: NF19927_high_63
Description: NF19927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19927_high_63 |
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Alignment Details
Target: chr2 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 41152025 - 41151702
Alignment:
| Q |
1 |
ttaaacattctgaatgcactcttactagaacatcttgcccatctcctatgtttccctaagtaaccaataagaaattataattgagaaaaatattatgctt |
100 |
Q |
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| T |
41152025 |
ttaaacattctgaatgcactcttactagaacatcttgcccatctcctatgtttccctaagtaaccaataagaaattataattgagaaaaatattatgctt |
41151926 |
T |
|
| Q |
101 |
taatttgtttaggttttcataaataaaattataagttccaagttttatcttgaaaatcaaattaactaagttatatttacctttacaacagccacatgct |
200 |
Q |
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| T |
41151925 |
taatttgtttaggttttcataaataaaattataagttccaagttttatcttgaaaatcaaattaactaagttatatttacctttacaacagccacatgct |
41151826 |
T |
|
| Q |
201 |
cagttccatccaactttgaactataacaatatgcttgaaatagaccccatttagtaggaagatgtgagacatatgttctttcaaccaatttctctcgctt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41151825 |
cagttccatccaactttgaactataacaatatgcttgaaatagaccccatttagtaggaagatgtgagacatatgttctttcaaccaatttctctcgctt |
41151726 |
T |
|
| Q |
301 |
tcttcgataccttgaagcgtcaca |
324 |
Q |
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|||||||||||||||||||||||| |
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| T |
41151725 |
tcttcgataccttgaagcgtcaca |
41151702 |
T |
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