View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19927_high_68 (Length: 330)

Name: NF19927_high_68
Description: NF19927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19927_high_68
NF19927_high_68
[»] chr1 (37 HSPs)
chr1 (69-191)||(46903581-46903703)
chr1 (257-330)||(46903769-46903842)
chr1 (69-145)||(31666090-31666166)
chr1 (69-143)||(40053017-40053091)
chr1 (70-141)||(21446106-21446177)
chr1 (69-139)||(28457237-28457307)
chr1 (73-142)||(644811-644880)
chr1 (69-141)||(2827598-2827670)
chr1 (73-141)||(27787604-27787672)
chr1 (70-142)||(37741839-37741911)
chr1 (69-141)||(49615163-49615235)
chr1 (70-141)||(6396439-6396510)
chr1 (70-143)||(24158762-24158835)
chr1 (70-143)||(43757698-43757771)
chr1 (69-141)||(44714352-44714426)
chr1 (69-144)||(31244620-31244695)
chr1 (76-142)||(8312263-8312329)
chr1 (73-142)||(11038377-11038440)
chr1 (69-135)||(30596825-30596891)
chr1 (69-135)||(37947114-37947180)
chr1 (70-130)||(51436331-51436390)
chr1 (69-135)||(8577396-8577462)
chr1 (69-144)||(41564765-41564840)
chr1 (69-143)||(27954339-27954413)
chr1 (70-135)||(11121592-11121657)
chr1 (69-142)||(23399876-23399949)
chr1 (69-141)||(835982-836054)
chr1 (69-141)||(1100328-1100400)
chr1 (87-139)||(19427645-19427696)
chr1 (69-141)||(29638826-29638898)
chr1 (84-139)||(21263149-21263204)
chr1 (104-146)||(35030657-35030699)
chr1 (69-135)||(43105216-43105282)
chr1 (69-146)||(36930640-36930716)
chr1 (70-99)||(48028638-48028667)
chr1 (69-142)||(48962097-48962170)
chr1 (69-145)||(19920873-19920949)
[»] chr8 (23 HSPs)
chr8 (69-144)||(45405720-45405795)
chr8 (69-143)||(5742543-5742617)
chr8 (69-141)||(28156314-28156386)
chr8 (70-144)||(32674117-32674191)
chr8 (70-139)||(38939082-38939151)
chr8 (70-144)||(42651032-42651106)
chr8 (69-143)||(33635686-33635760)
chr8 (72-140)||(34578226-34578294)
chr8 (70-141)||(14233532-14233603)
chr8 (69-142)||(25430757-25430830)
chr8 (69-144)||(28713204-28713279)
chr8 (69-144)||(28720551-28720626)
chr8 (69-144)||(28728193-28728268)
chr8 (77-140)||(34883283-34883346)
chr8 (72-142)||(18550093-18550163)
chr8 (69-142)||(8233383-8233456)
chr8 (69-141)||(34247885-34247957)
chr8 (70-133)||(13924121-13924184)
chr8 (72-133)||(3394598-3394659)
chr8 (69-142)||(33692832-33692905)
chr8 (69-142)||(34838157-34838230)
chr8 (69-145)||(12045538-12045613)
chr8 (69-109)||(40459684-40459724)
[»] chr7 (25 HSPs)
chr7 (69-143)||(2600420-2600494)
chr7 (69-141)||(37970044-37970116)
chr7 (70-142)||(384663-384735)
chr7 (69-141)||(640503-640575)
chr7 (70-144)||(47379672-47379746)
chr7 (70-137)||(28548127-28548194)
chr7 (69-143)||(11070339-11070413)
chr7 (72-135)||(41458794-41458857)
chr7 (72-141)||(36108286-36108354)
chr7 (89-141)||(27943088-27943140)
chr7 (96-145)||(32747370-32747419)
chr7 (69-142)||(44185287-44185360)
chr7 (69-141)||(23034201-23034273)
chr7 (69-144)||(47945094-47945169)
chr7 (69-144)||(47950524-47950599)
chr7 (69-141)||(12141995-12142066)
chr7 (69-141)||(24380609-24380681)
chr7 (69-137)||(27704546-27704614)
chr7 (69-141)||(45335974-45336046)
chr7 (107-142)||(27383813-27383848)
chr7 (72-141)||(33341012-33341082)
chr7 (70-99)||(35212887-35212916)
chr7 (69-146)||(48639268-48639345)
chr7 (69-141)||(29923782-29923853)
chr7 (69-141)||(41910073-41910145)
[»] chr2 (37 HSPs)
chr2 (70-144)||(40721883-40721957)
chr2 (69-143)||(34373119-34373193)
chr2 (69-145)||(304876-304952)
chr2 (70-141)||(43026048-43026119)
chr2 (69-143)||(38724203-38724277)
chr2 (69-140)||(9377647-9377718)
chr2 (69-146)||(4858224-4858301)
chr2 (69-141)||(1151640-1151712)
chr2 (69-141)||(27328997-27329069)
chr2 (79-142)||(24727523-24727586)
chr2 (69-141)||(11728009-11728081)
chr2 (69-145)||(25094463-25094539)
chr2 (69-141)||(23141465-23141537)
chr2 (69-141)||(23553255-23553327)
chr2 (69-141)||(30340105-30340177)
chr2 (69-137)||(37827677-37827745)
chr2 (69-142)||(35518386-35518459)
chr2 (69-137)||(13850076-13850144)
chr2 (69-142)||(8757655-8757728)
chr2 (69-141)||(34141554-34141626)
chr2 (80-143)||(33569690-33569753)
chr2 (70-144)||(13711173-13711246)
chr2 (69-143)||(37064169-37064243)
chr2 (70-142)||(28679239-28679311)
chr2 (69-141)||(43205204-43205276)
chr2 (70-145)||(24491561-24491636)
chr2 (69-135)||(21805681-21805746)
chr2 (72-145)||(28264642-28264715)
chr2 (69-142)||(32755789-32755862)
chr2 (69-142)||(38027502-38027575)
chr2 (69-141)||(1096231-1096303)
chr2 (77-141)||(5852577-5852641)
chr2 (73-137)||(6328782-6328845)
chr2 (69-141)||(12257012-12257084)
chr2 (69-141)||(19523289-19523361)
chr2 (69-141)||(26387719-26387791)
chr2 (69-141)||(38533086-38533158)
[»] chr5 (31 HSPs)
chr5 (69-141)||(3518294-3518366)
chr5 (71-141)||(35358823-35358893)
chr5 (69-138)||(8761758-8761827)
chr5 (69-141)||(10469835-10469907)
chr5 (69-144)||(1108109-1108188)
chr5 (69-140)||(12612906-12612977)
chr5 (69-140)||(31625965-31626036)
chr5 (69-142)||(29765942-29766015)
chr5 (69-148)||(17574105-17574184)
chr5 (72-139)||(34698890-34698956)
chr5 (69-122)||(5005224-5005277)
chr5 (69-143)||(37821027-37821101)
chr5 (69-135)||(43152954-43153020)
chr5 (69-141)||(35616689-35616761)
chr5 (69-140)||(38919957-38920028)
chr5 (69-140)||(8442270-8442341)
chr5 (69-143)||(4173010-4173084)
chr5 (69-142)||(9940165-9940238)
chr5 (70-142)||(11306808-11306879)
chr5 (69-140)||(125203-125273)
chr5 (70-133)||(12203257-12203320)
chr5 (87-145)||(21771357-21771415)
chr5 (70-147)||(2117523-2117599)
chr5 (93-146)||(9403648-9403700)
chr5 (70-135)||(15639497-15639561)
chr5 (69-142)||(18729164-18729237)
chr5 (72-144)||(3849612-3849684)
chr5 (69-105)||(5043036-5043072)
chr5 (115-147)||(19127280-19127312)
chr5 (69-141)||(39032492-39032564)
chr5 (69-141)||(39595385-39595456)
[»] chr3 (37 HSPs)
chr3 (69-145)||(2280288-2280364)
chr3 (69-142)||(50025572-50025645)
chr3 (70-142)||(14847405-14847477)
chr3 (69-140)||(29533872-29533943)
chr3 (70-142)||(38471754-38471826)
chr3 (69-141)||(16295575-16295647)
chr3 (70-141)||(9557820-9557891)
chr3 (70-141)||(33971995-33972066)
chr3 (69-139)||(33074984-33075054)
chr3 (70-143)||(36301096-36301167)
chr3 (69-142)||(10565163-10565235)
chr3 (72-137)||(25559818-25559883)
chr3 (73-145)||(42643352-42643424)
chr3 (70-141)||(1261263-1261334)
chr3 (99-146)||(3210559-3210606)
chr3 (69-144)||(9027724-9027799)
chr3 (73-135)||(47140569-47140631)
chr3 (69-146)||(43220025-43220102)
chr3 (69-141)||(43149231-43149303)
chr3 (69-140)||(25806413-25806484)
chr3 (69-147)||(49361719-49361797)
chr3 (72-141)||(34208381-34208450)
chr3 (72-143)||(884651-884722)
chr3 (79-142)||(31763928-31763991)
chr3 (94-145)||(52383135-52383186)
chr3 (69-143)||(2935397-2935471)
chr3 (103-145)||(52381248-52381290)
chr3 (86-143)||(27276862-27276919)
chr3 (77-141)||(29555729-29555793)
chr3 (69-133)||(51385336-51385400)
chr3 (69-144)||(21481875-21481949)
chr3 (69-143)||(14838931-14839005)
chr3 (69-142)||(7231894-7231966)
chr3 (69-142)||(47683901-47683974)
chr3 (69-145)||(11173561-11173636)
chr3 (102-142)||(26548675-26548715)
chr3 (79-147)||(40821742-40821810)
[»] chr6 (7 HSPs)
chr6 (69-143)||(34976727-34976801)
chr6 (70-143)||(3335344-3335417)
chr6 (69-145)||(608545-608621)
chr6 (73-143)||(22422265-22422335)
chr6 (69-142)||(7303992-7304065)
chr6 (70-141)||(35050283-35050354)
chr6 (72-146)||(17442936-17443010)
[»] chr4 (34 HSPs)
chr4 (69-143)||(46309009-46309083)
chr4 (69-141)||(1987601-1987673)
chr4 (69-142)||(30250185-30250258)
chr4 (69-140)||(9827874-9827945)
chr4 (78-141)||(26442276-26442339)
chr4 (70-142)||(4949121-4949193)
chr4 (69-143)||(34538041-34538115)
chr4 (69-142)||(37732060-37732133)
chr4 (86-143)||(55960828-55960885)
chr4 (79-139)||(6093495-6093555)
chr4 (89-141)||(46686356-46686408)
chr4 (69-141)||(45418172-45418245)
chr4 (69-135)||(43983008-43983074)
chr4 (69-135)||(46799866-46799932)
chr4 (94-143)||(35037718-35037767)
chr4 (69-141)||(45678374-45678446)
chr4 (79-146)||(36946975-36947042)
chr4 (69-144)||(50291393-50291468)
chr4 (70-144)||(29863663-29863737)
chr4 (70-136)||(31318860-31318926)
chr4 (69-142)||(18944396-18944469)
chr4 (70-147)||(42915102-42915178)
chr4 (69-138)||(54801378-54801447)
chr4 (69-109)||(54803250-54803290)
chr4 (69-144)||(8487746-8487821)
chr4 (69-144)||(36110245-36110320)
chr4 (69-135)||(28676049-28676114)
chr4 (69-135)||(33777005-33777071)
chr4 (69-143)||(46355177-46355251)
chr4 (72-142)||(46791878-46791948)
chr4 (69-142)||(31275257-31275329)
chr4 (69-138)||(37775318-37775387)
chr4 (116-145)||(39241187-39241216)
chr4 (69-141)||(5234360-5234431)
[»] scaffold0036 (1 HSPs)
scaffold0036 (69-138)||(54553-54622)
[»] scaffold0592 (1 HSPs)
scaffold0592 (69-133)||(1021-1085)
[»] scaffold0542 (1 HSPs)
scaffold0542 (72-147)||(2955-3030)
[»] scaffold0014 (1 HSPs)
scaffold0014 (69-141)||(145158-145230)
[»] scaffold0651 (1 HSPs)
scaffold0651 (70-136)||(4744-4810)
[»] scaffold0514 (1 HSPs)
scaffold0514 (69-141)||(1735-1807)


Alignment Details
Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 46903581 - 46903703
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttttacaatttggcatatctgtttta 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  46903581 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttttacaatttgacatatctgtttta 46903680  T
Q  169 actttctatacccaaactcataa 191  Q
     ||||||||||||||||||||||    
T  46903681 cctttctatacccaaactcataa 46903703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 46903769 - 46903842
Alignment:
Q  257 aaattaaaatgagttgtcaatctcccttgctcgtccttgaagaatgtaatcaaaggtataacgattaatcactt 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46903769 aaattaaaatgagttgtcaatctcccttgctcgtccttgaagaatgtaatcaaaggtataacgattaatcactt 46903842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 31666166 - 31666090
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  31666166 gaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatggttgtcaaaatattactactctttt 31666090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 40053017 - 40053091
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  40053017 gaccaatgaaaagagagaacaacaaagttgtctcaaagattgtaccaaaatagttgttaaaatatcactactctt 40053091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 21446177 - 21446106
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  21446177 accaatgagaagagagatcaacaaagttgtctcaaaggttgtaccaaaatggttatcaaaatatcactactc 21446106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 28457307 - 28457237
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactac 139  Q
    ||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28457307 gaccaatgaaaatagagaacaataaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactac 28457237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 644811 - 644880
Alignment:
Q  73 aatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  644811 aatgagaagagagaacaataaagttgtctcaaatgttgtaccaaaatggttgtcaaaatatcactactct 644880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 2827670 - 2827598
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||    
T  2827670 gaccaataagaagagagaacaacaaaattgtctcaaaggttgtaccaaaatggttatcaaaatatcactactc 2827598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 27787604 - 27787672
Alignment:
Q  73 aatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  27787604 aatgagaagagagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaactatcactactc 27787672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 37741911 - 37741839
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| ||||||||||||||||    
T  37741911 accaatgagaagagagaacaacaaagttgtctcaaaaattgtatcaaaatggttgtcaaaatatcactactct 37741839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 49615235 - 49615163
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  49615235 gaccaatgagaaaagagaacaataaagttgtctcaaagattgtaccaaaatggttgtcaaaatatcactactc 49615163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 6396439 - 6396510
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||| ||||||||||    
T  6396439 accaatgagaagagagaacaacaaagttgtctcaaatgttgtaccaaaatgattgtcaaaacatcactactc 6396510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 143
Target Start/End: Original strand, 24158762 - 24158835
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||| |||||| |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  24158762 accaataagaagacagaacaacaaagttgtctcaaaggttgttcctaaatggttgtcaaaatatcactactctt 24158835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 143
Target Start/End: Original strand, 43757698 - 43757771
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||| |||||||||||||||||||||||||||  || ||||||||| ||||| |||||||||||||||||    
T  43757698 accaatgaaaagagagaacaacaaagttgtctcaaaaattataccaaaatagttgtcaaaatatcactactctt 43757771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 44714352 - 44714426
Alignment:
Q  69 gaccaatgagaagagagaacaa--caaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| | ||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  44714352 gaccaataaaaagagagaacaaaacaaagttgtctcaaaggttgtaccaaaatgattgttaaaatattactactc 44714426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 31244695 - 31244620
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    ||||||||||||||||||||||||  |||||| |||| ||||||||||||| |||||| |||||||| | ||||||    
T  31244695 gaccaatgagaagagagaacaacatggttgtcccaaatgttgtaccaaaatagttgttcaaatatcattgctcttt 31244620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 8312263 - 8312329
Alignment:
Q  76 gagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||| ||| |||||||||||||||||| ||||| || |||||||||||| ||||||||||||||||    
T  8312263 gagaatagaaaacaacaaagttgtctcagaggttatatcaaaatggttgtcaaaatatcactactct 8312329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 11038377 - 11038440
Alignment:
Q  73 aatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||||||||||||||||      || |||||||||||||||||||||||||||||||||||||||    
T  11038377 aatgagaagagagaacaacaaa------tcgaaggttgtaccaaaatggttgttaaaatatcactactct 11038440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 30596825 - 30596891
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    ||||||||| |||| ||||||| |||||||||||||||||||||||||||| | |||| ||||||||    
T  30596825 gaccaatgaaaagaaagaacaataaagttgtctcaaaggttgtaccaaaatagctgttcaaatatca 30596891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 37947180 - 37947114
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    ||||||||||||||||||||||||| |||||| |||| |||||| |||||| |||||| ||||||||    
T  37947180 gaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaacaaaatagttgttcaaatatca 37947114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 51436390 - 51436331
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaa 130  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||  |||||||||    
T  51436390 accaatgagaagagagaacaacaaagttgtctcaaaag-tgtaccaaaattattgttaaaa 51436331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 8577462 - 8577396
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    |||||||||||| |||||||||||| |||||| |||| ||| ||||||||| |||||| ||||||||    
T  8577462 gaccaatgagaatagagaacaacaaggttgtcccaaaagttataccaaaatagttgttcaaatatca 8577396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 41564840 - 41564765
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    ||||||| ||||||||  ||||||| |||||| ||||  |||||||||||  |||||| |||||||||||||||||    
T  41564840 gaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactcttt 41564765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 27954339 - 27954413
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||||||||||||||||||||||||||  ||||  |||| | ||||   ||||| ||||||||||||||||    
T  27954339 gaccaatgagaagagagaacaacaaagttgttccaaaaattgtgctaaaagaattgttcaaatatcactactctt 27954413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 11121592 - 11121657
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    ||||||||||||||| ||||||||  ||||| |||| ||| ||||||||| |||||| ||||||||    
T  11121592 accaatgagaagagacaacaacaagattgtcacaaaagttataccaaaatagttgttcaaatatca 11121657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 23399949 - 23399876
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| ||||||||  ||||||| |||||| ||||  |||||||||||  |||||| |||||||||||||||    
T  23399949 gaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgtttaaatatcactactct 23399876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 835982 - 836054
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    |||||||||||||||| || |||||  ||||| |||| ||||||||||||  |||||| ||||| ||||||||    
T  835982 gaccaatgagaagagaaaataacaagattgtcccaaaagttgtaccaaaagagttgttcaaataacactactc 836054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 1100328 - 1100400
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    |||||||||||||| |||| ||||| |||||| |||| ||||||| ||||  |||||| ||||| ||||||||    
T  1100328 gaccaatgagaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactactc 1100400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 19427645 - 19427696
Alignment:
Q  87 acaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactac 139  Q
    |||||||| || |||||||| |||||||||||| |||||||||||||||||||    
T  19427645 acaacaaaattatctcaaag-ttgtaccaaaattgttgttaaaatatcactac 19427696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 29638826 - 29638898
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| ||||||||  |||||||| ||||| ||||  |||||||||||  |||||| ||||||||||||||    
T  29638826 gaccaataagaagagaacacaacaaaattgtcccaaaaattgtaccaaaagagttgttcaaatatcactactc 29638898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 21263149 - 21263204
Alignment:
Q  84 agaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactac 139  Q
    |||||||||| |||||||||||  |||||| ||||| |||||| ||||||||||||    
T  21263149 agaacaacaaggttgtctcaaaaattgtacaaaaatagttgttcaaatatcactac 21263204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 35030699 - 35030657
Alignment:
Q  104 aaggttgtaccaaaatggttgttaaaatatcactactcttttt 146  Q
    |||||||||||||||| |||||| |||||||| ||||||||||    
T  35030699 aaggttgtaccaaaatagttgttcaaatatcattactcttttt 35030657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 43105216 - 43105282
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    ||||||| | |||||||||||| ||||||||| ||||  ||||||||||||  ||||| ||||||||    
T  43105216 gaccaataaaaagagagaacaataaagttgtcccaaaaattgtaccaaaataattgttcaaatatca 43105282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 36930716 - 36930640
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttt 146  Q
    ||||||| | ||||||||| || || ||||||  ||||||||||| |||||||||||| |||||||| | ||||||||    
T  36930716 gaccaataaaaagagagaaaaagaaggttgtcaaaaaggttgtac-aaaatggttgttcaaatatcattgctcttttt 36930640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Original strand, 48028638 - 48028667
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgt 99  Q
    ||||||||||||||||||||||||||||||    
T  48028638 accaatgagaagagagaacaacaaagttgt 48028667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 48962097 - 48962170
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| ||||||||  ||||||| |||||| ||||  |||||||||||  |||||| |||||||| ||||||    
T  48962097 gaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcaatactct 48962170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 19920873 - 19920949
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    ||||||| ||||||||||| |||||||||||| | || ||||| |  |||||| ||| ||||||||| | |||||||    
T  19920873 gaccaataagaagagagaaaaacaaagttgtcaccaaagttgtccttaaatggatgtcaaaatatcattgctctttt 19920949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 45405795 - 45405720
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45405795 gaccaatgagaagagagaacaataaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 45405720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 5742617 - 5742543
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  5742617 gaccaatgagaagagagaacaacaaagttgtctcaaaggatgtaccaaaatggttgtcaaaatatcactactctt 5742543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 28156314 - 28156386
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  28156314 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtactaaaatagttgtcaaaatatcactactc 28156386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 32674191 - 32674117
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    |||||||||||| || |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  32674191 accaatgagaagggataacaacaaagttgtctcaaaggttgtactaaaatggttgtcaaaatatcactactcttt 32674117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 38939151 - 38939082
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactac 139  Q
    |||||||||||||||||||||||||||| |||||||  |||||||||||||||||| |||||||||||||    
T  38939151 accaatgagaagagagaacaacaaagttatctcaaaaattgtaccaaaatggttgtcaaaatatcactac 38939082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 42651032 - 42651106
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||||||| || |||||    
T  42651032 accaatgagaagagagaacaacaaggttgtctcaaaagttgtaccaaaatagttgttcaaatatcattattcttt 42651106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 33635686 - 33635760
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||||||||||||||||| |||||| |||||||| |||||  ||||||||||| |||||||||| ||||||    
T  33635686 gaccaatgagaagagagaacaataaagttatctcaaagattgtattaaaatggttgtcaaaatatcaccactctt 33635760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 34578294 - 34578226
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactact 140  Q
    |||| |||||||||||||||||||||||| ||||  || ||||||||| ||||||||||||||| ||||    
T  34578294 caataagaagagagaacaacaaagttgtcccaaaaattataccaaaatagttgttaaaatatcattact 34578226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 14233603 - 14233532
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||||||||  ||||| | |||||| |||||    
T  14233603 accaatgagaagagagaacaacaaagttgtcacaaaagttataccaaaataattgttcagatatcattactc 14233532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 25430757 - 25430830
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| ||||||||  ||||||| |||||| |||| ||||||||||||  |||||| |||||||||||||||    
T  25430757 gaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactct 25430830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 28713204 - 28713279
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    ||||||| ||||||||  ||||||| |||||| ||||  |||||||||||  |||||| |||||||||||||||||    
T  28713204 gaccaataagaagagaatacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactcttt 28713279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 28720551 - 28720626
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    ||||||| ||||||||  ||||||| |||||| ||||  |||||||||||  |||||| |||||||||||||||||    
T  28720551 gaccaataagaagagaatacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactcttt 28720626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 28728193 - 28728268
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    ||||||| ||||||||  ||||||| |||||| ||||  |||||||||||  |||||| |||||||||||||||||    
T  28728193 gaccaataagaagagaatacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactcttt 28728268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 34883283 - 34883346
Alignment:
Q  77 agaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactact 140  Q
    ||||||||||||||||| ||||| ||||| ||||||| ||||| |||||| |||||||| ||||    
T  34883283 agaagagagaacaacaaggttgtatcaaaagttgtactaaaatagttgtttaaatatcattact 34883346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 18550093 - 18550163
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    |||| ||||||||  ||||||| |||||| |||| ||||||||||||| |||||| |||||||| ||||||    
T  18550093 caataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactct 18550163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 8233456 - 8233383
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||||||||||||||||||| ||| ||  ||| ||||||| ||||| | |||| |||||||| ||||||    
T  8233456 gaccaatgagaagagagaacaacaaggttatccaaaaagttgtacaaaaatagatgttcaaatatcattactct 8233383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 34247885 - 34247957
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||| ||||||||||||||| |||||| |||| |||||  ||||| ||||||  |||||||| |||||    
T  34247885 gaccaatgaaaagagagaacaacaaggttgtcccaaaagttgtctcaaaagggttgtacaaatatcattactc 34247957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 13924121 - 13924184
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatat 133  Q
    |||||||||||||||| |||||||  ||||| |||| ||||||||||||  |||||| ||||||    
T  13924121 accaatgagaagagaggacaacaagattgtcacaaaagttgtaccaaaagagttgttcaaatat 13924184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 3394659 - 3394598
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatat 133  Q
    ||||||||||||||||||| ||||||||| |||| ||| || ||||||  ||||| ||||||    
T  3394659 caatgagaagagagaacaataaagttgtcccaaaagttatatcaaaatacttgttcaaatat 3394598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 33692832 - 33692905
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||| ||||||| |||||||||||||| ||||  || || |||||  |||||| |||||||| ||||||    
T  33692832 gaccaatgaaaagagagcacaacaaagttgtcccaaaaattataacaaaaaagttgttcaaatatcattactct 33692905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 34838230 - 34838157
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| ||||||||  ||||||| ||||||  ||| ||||||||||||  |||||| |||||||||| ||||    
T  34838230 gaccaataagaagagaacacaacaaggttgtcctaaaagttgtaccaaaagagttgttcaaatatcactgctct 34838157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 12045613 - 12045538
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    |||||||||||||||| || || || ||||||  ||||||| |||| ||||||||||| |||||||| | |||||||    
T  12045613 gaccaatgagaagagacaagaagaaggttgtcaaaaaggttatacc-aaatggttgttcaaatatcattgctctttt 12045538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 40459724 - 40459684
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggtt 109  Q
    ||||||||  ||| |||||||||||||||||||||||||||    
T  40459724 gaccaatggaaagggagaacaacaaagttgtctcaaaggtt 40459684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 2600494 - 2600420
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2600494 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactctt 2600420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 37970044 - 37970116
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37970044 gaccaatgagaagagagaacaacaaagttgtctcaaatgttgtaccaaaatggttgttaaaatatcactactc 37970116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 384663 - 384735
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  384663 accaatgagaagagagaataacaaagttgtctcaaaggttgtatcaaaatgatttttaaaatatcactactct 384735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 640503 - 640575
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||| |||| |||||||||||||||    
T  640503 gaccaatgagaagagagaacaacaaagttgtctcaaagattataccaaaatgattgtcaaaatatcactactc 640575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 47379672 - 47379746
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||||||| |||||    
T  47379672 accaatgagaagagagaacaacaaagttgtctcaaaagttgcaccaaaatagttgtcaaaatatcactagtcttt 47379746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 28548194 - 28548127
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcact 137  Q
    |||||| |||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  28548194 accaataagaagagagaacaataaagttgtctcaaagattgtactaaaatggttgttaaaatatcact 28548127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 11070339 - 11070413
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    ||||||||| ||||||||| |||||||||||||||||| || |||||||||| |||| |||||||||||||||||    
T  11070339 gaccaatgaaaagagagaagaacaaagttgtctcaaagattctaccaaaatgattgtcaaaatatcactactctt 11070413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 41458857 - 41458794
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    |||||| || |||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  41458857 caatgaaaaaagagaacaacaaagttgtctcaaaagttgtaccaaaatgattgtcaaaatatca 41458794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 36108286 - 36108354
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    |||||| || ||| ||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  36108286 caatgaaaatagataacaataaagttgtctcaaaggt-gtaccaaaatagttgttaaaatatcactactc 36108354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 27943088 - 27943140
Alignment:
Q  89 aacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  27943088 aacaaaattgtctcaaagattgtaccaaaatgattgttaaaatatcactactc 27943140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 32747370 - 32747419
Alignment:
Q  96 ttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    |||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  32747370 ttgtctcaaaggttataccaaaatggttgtcaaaatatcaatactctttt 32747419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 44185287 - 44185360
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||||||||||||||||  | ||||||||||| |||||| |||||  |||||| |||||||||| ||||    
T  44185287 gaccaatgagaagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatcactcctct 44185360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 23034273 - 23034201
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| |||| |||| ||||||| |||||| |||| ||||||||||||  |||||| ||||||||||||||    
T  23034273 gaccaataagaaaagagcacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 23034201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 47945094 - 47945169
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    ||||||| ||||||||  ||||||| |||||| |||| |||||| |||||  |||||| |||||||||||||||||    
T  47945094 gaccaataagaagagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactcttt 47945169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 47950524 - 47950599
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    ||||||| ||||||||  ||||||| |||||| |||| |||||| |||||  |||||| |||||||||||||||||    
T  47950524 gaccaataagaagagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactcttt 47950599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 12141995 - 12142066
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||| |||| |||| || ||||||||| |||| |||||| |||| |||||||| ||||||||||||||    
T  12141995 gaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgtatcaaa-tggttgttcaaatatcactactc 12142066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 24380681 - 24380609
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| ||||||||  ||||||| |||||  |||| ||||||||||||  |||||| ||||||||||||||    
T  24380681 gaccaataagaagagaacacaacaaggttgttccaaaagttgtaccaaaagagttgttcaaatatcactactc 24380609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 27704546 - 27704614
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcact 137  Q
    ||||||| ||||||||  |||||||||||||| |||| |||||| |||||  |||||| ||||||||||    
T  27704546 gaccaataagaagagaacacaacaaagttgtcccaaaagttgtaacaaaagagttgttcaaatatcact 27704614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 45335974 - 45336046
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| | ||||||||||||||| |||||| ||||  |||||||||||  || ||| ||||||||||||||    
T  45335974 gaccaataaaaagagagaacaacaaggttgtcccaaaatttgtaccaaaagagtagttcaaatatcactactc 45336046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 142
Target Start/End: Complemental strand, 27383848 - 27383813
Alignment:
Q  107 gttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||||||||||||||||||||| ||||||||    
T  27383848 gttgtaccaaaatggttgttaaaatattactactct 27383813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 33341082 - 33341012
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgt-taaaatatcactactc 141  Q
    ||||||||||  | ||||||||||||||||||||  || ||||||||| |||||  |||||||||||||||    
T  33341082 caatgagaaggtaaaacaacaaagttgtctcaaacattataccaaaatagttgtcaaaaatatcactactc 33341012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 35212916 - 35212887
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgt 99  Q
    ||||||||||||||||||||||||||||||    
T  35212916 accaatgagaagagagaacaacaaagttgt 35212887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 48639345 - 48639268
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttt 146  Q
    |||||||  |||||||  ||||||| |||||  |||| ||||||||||||  |||||| |||||||||||||| ||||    
T  48639345 gaccaatacgaagagaacacaacaaggttgttccaaaagttgtaccaaaagagttgttcaaatatcactactcatttt 48639268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 29923782 - 29923853
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| |||| |||  ||||||| |||||| |||| ||||||||||||  |||||| ||||||||||||||    
T  29923782 gaccaataagaaaagaacacaacaaggttgtc-caaaagttgtaccaaaagagttgttcaaatatcactactc 29923853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 41910145 - 41910073
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| ||||||||  ||||||| ||||||  ||| ||||||||||||   ||||| ||||||||||||||    
T  41910145 gaccaataagaagagaacacaacaaggttgtcctaaaagttgtaccaaaagaattgttcaaatatcactactc 41910073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 40721883 - 40721957
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40721883 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactcttt 40721957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 34373119 - 34373193
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  34373119 gaccaatgagaagagagaacaacaaagttgtctcaaaggttataccaaaatggttgtcaaaatatcactactctt 34373193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 304952 - 304876
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  304952 gaccaatgagaagagtgaacaacaaagttgtctcaaaggttgtatcaaaatggttgttaaaatatcacaactctttt 304876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 43026048 - 43026119
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  43026048 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatgattgtcaaaatatcactactc 43026119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 38724277 - 38724203
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38724277 gaccaatgaatagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactctt 38724203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 9377718 - 9377647
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactact 140  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  9377718 gaccaataagaagagagaacaacaaagttgtctcaaaggttataccaaaatggttgttaaaatatcattact 9377647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 4858224 - 4858301
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttt 146  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||| |||||    
T  4858224 gaccaatgaaaagagagaacaacaaaattgtctcaaaggttgtaccaaaatgattgtcaaaatatcactacttttttt 4858301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 1151640 - 1151712
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  1151640 gaccaatgaaaaaagagaacaacaaagttgtctcaaaggttgtaccaaaatagttgtcaaaatatcactactc 1151712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 27329069 - 27328997
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  27329069 gaccaatgagaaaagagaacaacaaagttgtctcaaaagatgtaccaaaattgttgttaaaatatcactactc 27328997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 24727523 - 24727586
Alignment:
Q  79 aagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24727523 aagagagaacaataaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactct 24727586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 11728081 - 11728009
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||| |||||| |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  11728081 gaccaatgaaaagagaaaacaacaaagttgtcttaaagattgtaccaaaatgattgttaaaatatcactactc 11728009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 25094463 - 25094539
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||  |||||||    
T  25094463 gaccaattagaagagagaacaacaaagttgtctcaaagattgtactaaaatggttgtcaaaatatcaccgctctttt 25094539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 23141465 - 23141537
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||||||||||||||||||| |||||| |||| ||||||||||||  |||||| ||||||||||||||    
T  23141465 gaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 23141537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 23553255 - 23553327
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||||||||||||||||||| |||||| |||| ||||||||||||  |||||| ||||||||||||||    
T  23553255 gaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 23553327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 30340105 - 30340177
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||||||||||||||||||| |||||| |||| ||||||||||||  |||||| ||||||||||||||    
T  30340105 gaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 30340177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 37827745 - 37827677
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcact 137  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||||||||||  ||||||||||||||||    
T  37827745 gaccaatgaaaagagagaacaacaaagttgtcttaaagattgtaccaaaataattgttaaaatatcact 37827677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 35518386 - 35518459
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| |||||||||||||||||||||||| |||| |||||| |||||| |||||| |||||||| ||||||    
T  35518386 gaccaataagaagagagaacaacaaagttgtcccaaaagttgtatcaaaatagttgttcaaatatcattactct 35518459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 13850144 - 13850076
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcact 137  Q
    ||||||||| |||||||||||||||| |||||||||| ||| ||||||||| ||||| |||||||||||    
T  13850144 gaccaatgaaaagagagaacaacaaaattgtctcaaaagttataccaaaatagttgtcaaaatatcact 13850076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 8757655 - 8757728
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| ||||||||||||||||| |||||  |||| ||||||||||||| |||||| |||||||| ||||||    
T  8757655 gaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactct 8757728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 34141554 - 34141626
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| ||||||||  |||||||||||||  |||| ||||||||||||  |||||| ||||||||||||||    
T  34141554 gaccaataagaagagaacacaacaaagttgttccaaaagttgtaccaaaagagttgttcaaatatcactactc 34141626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 33569690 - 33569753
Alignment:
Q  80 agagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||| ||||||||||||||||| ||||||||||||  |||||| ||||| |||| |||||    
T  33569690 agagagaataacaaagttgtctcaaaagttgtaccaaaagagttgttcaaataacactgctctt 33569753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 13711173 - 13711246
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    |||||||| ||||||||| ||  |||||||| |||| ||||||| ||||| |||||| |||||||||||||||||    
T  13711173 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtac-aaaatagttgttcaaatatcactactcttt 13711246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 37064169 - 37064243
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||||||||||| |||||||| ||| || |||| ||||||||||||  |||| | |||||||| |||||||    
T  37064169 gaccaatgagaagagaaaacaacaaggttatcccaaaagttgtaccaaaagagttgatcaaatatcagtactctt 37064243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 28679239 - 28679311
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    |||||| ||||||||  ||||||| |||||| |||| ||||||||||||  |||||| |||||||| ||||||    
T  28679239 accaataagaagagaatacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcattactct 28679311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 43205204 - 43205276
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||| ||||||| |||||||||||||| |||| |||||| |||||  |||||| ||||| || |||||    
T  43205204 gaccaatgaaaagagagcacaacaaagttgtcccaaaagttgtagcaaaaaagttgttcaaataacattactc 43205276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 24491636 - 24491561
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    |||||| |||||||||||||| ||  |||||||||| |||||| |||||   ||||| |||||||||| |||||||    
T  24491636 accaataagaagagagaacaataagattgtctcaaaagttgtatcaaaagaattgttcaaatatcactgctctttt 24491561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 21805746 - 21805681
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    |||||||| |||||||||| || || ||||||  |||| |||||||||| |||||||||||||||||    
T  21805746 gaccaatgggaagagagaataagaaggttgtcaaaaagattgtaccaaa-tggttgttaaaatatca 21805681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 28264642 - 28264715
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    ||||||||||||| || ||||| ||||||| ||| ||||||| ||||  |||||| ||||| ||||||| ||||    
T  28264642 caatgagaagagataataacaaggttgtcttaaaagttgtactaaaagagttgttcaaataacactactatttt 28264715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 32755789 - 32755862
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| | ||||||||| || || | ||||||||| |||||  ||||||||||||  |||||||||||||||    
T  32755789 gaccaatcaaaagagagaaaaataaggctgtctcaaaagttgtcacaaaatggttgtagaaatatcactactct 32755862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 38027575 - 38027502
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| ||||||||  ||||||| ||||| ||||| ||| ||| ||||  |||||| |||||||||||||||    
T  38027575 gaccaataagaagagaacacaacaaggttgtttcaaaagttatactaaaagagttgtttaaatatcactactct 38027502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 1096303 - 1096231
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| ||||||||  |||||||| |||||  ||| |||||| |||||  |||||| ||||||||||||||    
T  1096303 gaccaataagaagagaacacaacaaaattgtcctaaaagttgtatcaaaagagttgttcaaatatcactactc 1096231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 5852577 - 5852641
Alignment:
Q  77 agaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||  ||||||| |||||| |||| ||| ||||||||  |||||| ||||||||||||||    
T  5852577 agaagagaacacaacaaggttgtcccaaaagttttaccaaaagagttgttcaaatatcactactc 5852641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 6328782 - 6328845
Alignment:
Q  73 aatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcact 137  Q
    |||||||||||| ||||| ||| || || |||||||| |||||||||| |||| |||||||||||    
T  6328782 aatgagaagagataacaataaa-ttatcccaaaggttataccaaaatgattgtcaaaatatcact 6328845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 12257012 - 12257084
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| |||||| |  ||||||| |||||| ||||  |||||||||||  |||||| ||||||||||||||    
T  12257012 gaccaataagaagaaaacacaacaaggttgtcccaaaaattgtaccaaaaaagttgttcaaatatcactactc 12257084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 19523361 - 19523289
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| | |||||||||||| ||| ||||  ||||  |||||||||||| |||||| |||||||| |||||    
T  19523361 gaccaataaaaagagagaacaataaaattgtaccaaaaattgtaccaaaatagttgtttaaatatcattactc 19523289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 26387791 - 26387719
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| |||| |||  ||||||| |||||| |||| |||||| |||||  |||||| ||||||||||||||    
T  26387791 gaccaataagaaaagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactc 26387719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 38533158 - 38533086
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||| || |||||||||||| |||||| ||||  |||||||||||   || || ||||||||||||||    
T  38533158 gaccaatgacaatagagaacaacaaggttgtcccaaaaattgtaccaaaagaattattcaaatatcactactc 38533086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 3518294 - 3518366
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3518294 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactc 3518366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 35358893 - 35358823
Alignment:
Q  71 ccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35358893 ccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgctaaaatatcactactc 35358823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 8761758 - 8761827
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcacta 138  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8761758 gaccaatgaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaacatatcacta 8761827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 10469907 - 10469835
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  10469907 gaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatgattgtcaaaatatcactactc 10469835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 1108109 - 1108188
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgt----ctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    |||||||||||||||||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||    
T  1108109 gaccaatgagaagagagaacaacaaagttgtttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactcttt 1108188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 12612977 - 12612906
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactact 140  Q
    ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| |||||||| ||||    
T  12612977 gaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaatggttgttcaaatatcattact 12612906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 31626036 - 31625965
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactact 140  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||| ||||||||||||||    
T  31626036 gaccaatgagaagagagaacaataaagttgtcttaaaagttgtactaaaatggttgtcaaaatatcactact 31625965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 29765942 - 29766015
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    |||||||||  | |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  29765942 gaccaatgaataaagagaacaacaaagttatctcaaaggttgtaccaaaatagttgtcaaaatatcactactct 29766015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 17574184 - 17574105
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttttac 148  Q
    ||||| |||||||| |||||||||| |||||| |||| ||||||||||||| |||||| |||||||| ||||||||||||    
T  17574184 gaccagtgagaagaaagaacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactctttttac 17574105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 34698890 - 34698956
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactac 139  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||| ||||||||||||||||||    
T  34698890 caatgagaagagaaaacaacaaagttgtttcaaag-ttgtaccaaaatgattgttaaaatatcactac 34698956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 5005224 - 5005277
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggt 122  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  5005224 gaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 5005277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 37821101 - 37821027
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    ||||||| ||||||||  ||||||| |||||| |||| ||||||||||||| |||||| ||||||||||||||||    
T  37821101 gaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcactactctt 37821027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 43153020 - 43152954
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    ||||||||||||||||||||||||||||||||  ||  ||||||||||||| |||||| ||||||||    
T  43153020 gaccaatgagaagagagaacaacaaagttgtcctaagagttgtaccaaaatagttgttcaaatatca 43152954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 35616761 - 35616689
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| ||||||||||||||||| |||||| ||||  || ||||||||| |||||| ||||||||||||||    
T  35616761 gaccaataagaagagagaacaacaaggttgtcccaaaatttataccaaaatagttgttcaaatatcactactc 35616689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 38919957 - 38920028
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactact 140  Q
    ||||||||||||||||||||||||| ||||||  ||| ||||||||||||  |||||| ||||||| |||||    
T  38919957 gaccaatgagaagagagaacaacaaggttgtcctaaaagttgtaccaaaagagttgttcaaatatctctact 38920028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 8442270 - 8442341
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactact 140  Q
    |||||||||||||||||||||||||| ||||  ||||  || ||||||||| |||||| |||||||| ||||    
T  8442270 gaccaatgagaagagagaacaacaaaattgttccaaaaattataccaaaatagttgttcaaatatcattact 8442341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 4173084 - 4173010
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||||||||| |||| ||||| |||||| |||||||||||| ||||  |||||| ||||| | ||||||||    
T  4173084 gaccaatgagaagaaagaataacaaggttgtcacaaaggttgtactaaaagagttgttcaaataactctactctt 4173010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 9940165 - 9940238
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||| ||||||||||||||||||||||  |||  ||||| |||||| ||| || |||||||| ||||||    
T  9940165 gaccaatgaaaagagagaacaacaaagttgtcctaaaaattgtatcaaaatagttattcaaatatcattactct 9940238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 11306808 - 11306879
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    |||||||| ||||||||| ||  ||||||||||||| |||||| | |||| |||||| |||||||||||||||    
T  11306808 accaatgaaaagagagaaaaaagaagttgtctcaaaagttgtatc-aaatagttgttcaaatatcactactct 11306879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 125203 - 125273
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactact 140  Q
    ||||||||| ||||||||| ||  |||||||| |||| |||||| |||| |||||||| |||||||||||||    
T  125203 gaccaatgaaaagagagaaaaaagaagttgtcgcaaaagttgtatcaaa-tggttgttcaaatatcactact 125273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 12203257 - 12203320
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatat 133  Q
    |||||||||||||||| |||||||  ||||| |||| ||||||||||||  |||||| ||||||    
T  12203257 accaatgagaagagaggacaacaagattgtcacaaaagttgtaccaaaagagttgttcaaatat 12203320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 21771415 - 21771357
Alignment:
Q  87 acaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    ||||||| |||||| |||| ||| ||||||||  |||||| ||||||||||||||||||    
T  21771415 acaacaaggttgtcccaaaagttataccaaaagagttgttcaaatatcactactctttt 21771357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 2117599 - 2117523
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttta 147  Q
    |||||||| || |||||| ||  |||||||| |||| |||||| |||| | |||||| ||||||||||||||||||||    
T  2117599 accaatgaaaaaagagaaaaaagaagttgtcacaaaagttgtatcaaa-tagttgttcaaatatcactactcttttta 2117523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 9403648 - 9403700
Alignment:
Q  93 aagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttt 146  Q
    |||||||| |||| |||||| |||| |||||||| |||||||||||||||||||    
T  9403648 aagttgtcacaaaagttgtatcaaa-tggttgtttaaatatcactactcttttt 9403700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 15639497 - 15639561
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    |||||||||||| ||||| || || ||||||  |||||||||||| ||||||||||| ||||||||    
T  15639497 accaatgagaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatca 15639561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 18729237 - 18729164
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| | ||||||  ||||||| |||||| |||| ||||||||||||  |||||| |||||| ||||||||    
T  18729237 gaccaataaaaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatattactactct 18729164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 3849612 - 3849684
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    |||||| |||| || ||||||| ||||||||||| |||||| |||||  | |||| | |||||||||||||||    
T  3849612 caatgaaaagatagcacaacaaggttgtctcaaaagttgtagcaaaaaagatgttcatatatcactactcttt 3849684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 5043036 - 5043072
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaa 105  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  5043036 gaccaatgagaagagagaacaacaaggttgtcccaaa 5043072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 147
Target Start/End: Original strand, 19127280 - 19127312
Alignment:
Q  115 aaaatggttgttaaaatatcactactcttttta 147  Q
    |||||||||||| ||||||||||||||||||||    
T  19127280 aaaatggttgttcaaatatcactactcttttta 19127312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 39032564 - 39032492
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| ||||||||  ||||||| |||||| ||||  ||||| |||||  |||||| ||||||||||||||    
T  39032564 gaccaataagaagagaacacaacaaggttgtcccaaaaattgtatcaaaagagttgttcaaatatcactactc 39032492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 39595385 - 39595456
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||| ||||||||| ||  |||||||| |||| |||||| |||| |||||||| |||||||| |||||    
T  39595385 gaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa-tggttgttcaaatatcattactc 39595456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 6e-31; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 2280288 - 2280364
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2280288 gaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatggttgtcaaaatatcactactctttt 2280364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 50025645 - 50025572
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  50025645 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtgaaaatatcattactct 50025572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 14847477 - 14847405
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  14847477 accaatgagaagatagaacaacaaagttgtctaaaaggttgtaccaaaatggttgtcaaaatatcactactct 14847405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 29533872 - 29533943
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactact 140  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  29533872 gaccaatgagaagagagaacaacaaagttgtctcaaaagttgtaccaaaatgattgtcaaaatatcactact 29533943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 38471754 - 38471826
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||  |||| ||||||||||||||||    
T  38471754 accaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaataattgtcaaaatatcactactct 38471826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 16295575 - 16295647
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  16295575 gaccaataaaaagagagaacaacaaagttgtctcaaaagttgtaccaaaatagttgtcaaaatatcactactc 16295647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 9557891 - 9557820
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||  |||| |||||||||||||||    
T  9557891 accaatgagaagagagaacaacaaaattgtctcaaaagttgtaccaaaataattgtcaaaatatcactactc 9557820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 33971995 - 33972066
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||||| |||||| |||||||| |||||    
T  33971995 accaatgagaagagagaacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaatatcattactc 33972066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 33074984 - 33075054
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactac 139  Q
    ||||||| | || |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  33074984 gaccaataaaaaaagagaacaacaaagttgtctcaaaggttgtactaaaatagttgtcaaaatatcactac 33075054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 36301167 - 36301096
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||||||||||||||||||||||| ||||||| ||  |||||||||| |||| |||||||||||||||||    
T  36301167 accaatgagaagagagaacaacaaagttatctcaaatgt--taccaaaatgattgtcaaaatatcactactctt 36301096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 10565163 - 10565235
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| | || ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  10565163 gaccaataaaaatagagaacaataaagttgtctcaaaggt-gtaccaaaatggttgttaaaatatcactgctct 10565235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 25559818 - 25559883
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcact 137  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||| || |||||||||||||    
T  25559818 caatgagaagagagaacaataaaattgtctcaaaggttgtatcaaaatgattcttaaaatatcact 25559883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 42643352 - 42643424
Alignment:
Q  73 aatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    |||||||||||||||||||||| ||||||||||  || || |||||||||||| ||||||||||| |||||||    
T  42643352 aatgagaagagagaacaacaaaattgtctcaaaaattatatcaaaatggttgtcaaaatatcactgctctttt 42643424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 1261334 - 1261263
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||||||||| |||||||||||||||| |||  ||||| ||| |||||||| |||||||||||||||    
T  1261334 accaatgagaagagaaaacaacaaagttgtctaaaaaattgtatcaacatggttgtcaaaatatcactactc 1261263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 3210606 - 3210559
Alignment:
Q  99 tctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttt 146  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  3210606 tctcaaaggttgtaccaaaatggtagttaaaatatcactactcttttt 3210559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 9027724 - 9027799
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    ||||||| ||||||||||||||||| |||||  |||| ||||||||||||| |||||| |||||||| ||||||||    
T  9027724 gaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactcttt 9027799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 47140631 - 47140569
Alignment:
Q  73 aatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    ||||| || |||||||||||||||||||||||| ||||||||||||||||| | |||||||||    
T  47140631 aatgaaaatagagaacaacaaagttgtctcaaaagttgtaccaaaatggttctcaaaatatca 47140569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 43220102 - 43220025
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttt 146  Q
    |||||||||||| ||||||||||||| ||||| |||| ||| ||| ||||  |||||| |||||||||||||||||||    
T  43220102 gaccaatgagaatagagaacaacaaaattgtcccaaaagttatactaaaaaagttgttcaaatatcactactcttttt 43220025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 43149303 - 43149231
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| ||||||||||||||||| |||||  |||| ||||||||||||| |||||| |||||||| |||||    
T  43149303 gaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactc 43149231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 25806484 - 25806413
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactact 140  Q
    ||||||| | || ||||||||||||| |||| | |||||||||||||||||| |||||||||||| ||||||    
T  25806484 gaccaataaaaaaagagaacaacaaaattgtttaaaaggttgtaccaaaatgattgttaaaatattactact 25806413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 49361797 - 49361719
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttta 147  Q
    |||||||||||||| |||| |||||||||||| |||| ||||||| ||||  |||||| ||||| |||||||| |||||    
T  49361797 gaccaatgagaagaaagaataacaaagttgtcacaaaagttgtactaaaagagttgttcaaataacactactcctttta 49361719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 34208381 - 34208450
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    |||||||||||||||| |||||||||||||||||  |||||  |||||  |||| |||||||||||||||    
T  34208381 caatgagaagagagaaaaacaaagttgtctcaaaaattgtattaaaataattgtcaaaatatcactactc 34208450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 884651 - 884722
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||| |||||||| ||||||||| || |||||||  || ||||||||| |||||||||||||||||| ||||    
T  884651 caataagaagagaaaacaacaaaattctctcaaaaattataccaaaatagttgttaaaatatcactattctt 884722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 31763928 - 31763991
Alignment:
Q  79 aagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    |||||||||||||||| ||||| ||||  |||||||||||| |||||| |||||||| ||||||    
T  31763928 aagagagaacaacaaaattgtcccaaaaattgtaccaaaatagttgtttaaatatcattactct 31763991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 52383135 - 52383186
Alignment:
Q  94 agttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    |||| |||||||| |||||||||||| ||||| |||||||||||||||||||    
T  52383135 agttatctcaaagattgtaccaaaatagttgtcaaaatatcactactctttt 52383186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 2935471 - 2935397
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||||||||| |||| ||||| |||||| |||| ||||||| ||||  |||||| ||||| ||||||||||    
T  2935471 gaccaatgagaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactactctt 2935397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 145
Target Start/End: Original strand, 52381248 - 52381290
Alignment:
Q  103 aaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    ||||||||||| ||||||||||| |||||||||||||||||||    
T  52381248 aaaggttgtactaaaatggttgtcaaaatatcactactctttt 52381290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 27276862 - 27276919
Alignment:
Q  86 aacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||| |||||||||||  |||||||||||| |||||| |||||||| |||||||    
T  27276862 aacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaatatcattactctt 27276919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 29555793 - 29555729
Alignment:
Q  77 agaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||  ||||||| |||||| |||| ||||||||||||  |||||| ||||||||||||||    
T  29555793 agaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 29555729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 51385400 - 51385336
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatat 133  Q
    ||||||||| ||||||||||||||  |||||| |||| ||||||| ||||| |||||| ||||||    
T  51385400 gaccaatgaaaagagagaacaacatggttgtcccaaaagttgtactaaaatagttgttcaaatat 51385336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 21481875 - 21481949
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    ||||||||||||||||||||||  | ||||||||||| ||||||  |||  ||||||| |||||||||| ||||||    
T  21481875 gaccaatgagaagagagaacaatgaggttgtctcaaaagttgta-taaataggttgttcaaatatcactcctcttt 21481949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 14839005 - 14838931
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    ||||||| | ||||||  ||||||| |||||| ||||  |||||||||||  |||||| ||||||||||||||||    
T  14839005 gaccaataaaaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactctt 14838931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 7231966 - 7231894
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||| ||||||||| ||  || ||||| |||| |||||| |||| |||||||| |||||||||||||||    
T  7231966 gaccaatgaaaagagagaaaaaataaattgtcacaaaagttgtatcaaa-tggttgttcaaatatcactactct 7231894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 47683901 - 47683974
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| |||||||||||  | || ||||||||||| |||||  ||||||||||||  |||||||| ||||||    
T  47683901 gaccaataagaagagagaaagagaaggttgtctcaaaagttgtcacaaaatggttgtacaaatatcattactct 47683974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 11173561 - 11173636
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    ||||||||| ||||||||| ||  |||||||| |||| |||||| |||| |||||||| |||||| | |||||||||    
T  11173561 gaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa-tggttgttcaaatattattactctttt 11173636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 26548715 - 26548675
Alignment:
Q  102 caaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||||||||||||| |||| ||| ||||||||||||    
T  26548715 caaaggttgtaccaaaatgattgtcaaattatcactactct 26548675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 40821810 - 40821742
Alignment:
Q  79 aagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttta 147  Q
    ||||||| ||||||| |||||| |||| ||||||  ||||  |||||| |||||||| |||||||||||    
T  40821810 aagagagcacaacaaggttgtcccaaaagttgtagtaaaaaagttgttcaaatatcattactcttttta 40821742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 34976727 - 34976801
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  34976727 gaccaatgagaagagagaacaacaaagttatctcaaaggttgtaccaaaatggttgacaaaatatcactactctt 34976801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 3335417 - 3335344
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||| |||||||||||||||||||||||||||  ||||| |||||||| ||| ||||||||||| |||||    
T  3335417 accaatgaaaagagagaacaacaaagttgtctcaaatattgtatcaaaatggctgtcaaaatatcactgctctt 3335344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 608621 - 608545
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctttt 145  Q
    ||||||||||||||||||||||||| |||||| |||  ||||||||||||| |||||| |||||||| | |||||||    
T  608621 gaccaatgagaagagagaacaacaaggttgtcccaacagttgtaccaaaatagttgttcaaatatcattgctctttt 608545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 143
Target Start/End: Original strand, 22422265 - 22422335
Alignment:
Q  73 aatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||  ||||| |||||||| |||||||    
T  22422265 aatgagaagagagaacaacaaagttgtaccaaaagttgtaccaaaataattgttcaaatatcattactctt 22422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 7304065 - 7303992
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||||||||||||||||  | ||||||||||| |||||| |||||  |||||| |||||||||| ||||    
T  7304065 gaccaatgagaagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatcactcctct 7303992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 35050283 - 35050354
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| ||||| ||||||||||| || ||||||| ||| ||||||||| ||||| |||||| ||||||||    
T  35050283 accaatgtgaagatagaacaacaaaattatctcaaaagttttaccaaaatagttgtcaaaataccactactc 35050354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 146
Target Start/End: Original strand, 17442936 - 17443010
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttt 146  Q
    |||| ||||||||  |||| || |||||| |||| ||||||||||||  |||||| ||| |||||||||||||||    
T  17442936 caataagaagagaacacaataaggttgtcccaaaagttgtaccaaaagagttgttcaaaaatcactactcttttt 17443010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 46309083 - 46309009
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  46309083 gaccaatgaaaagagagaactacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactctt 46309009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 1987673 - 1987601
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  1987673 gaccaatgaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaatgattgtcaaaatatcactactc 1987601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 30250258 - 30250185
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  30250258 gaccaataaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaatgatttttaaaatatcactactct 30250185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 9827945 - 9827874
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactact 140  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||    
T  9827945 gaccaatgagaagagataacaacaaagttgtctcaaaggttataccaaaatgattgtcaaaatatcactact 9827874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 26442339 - 26442276
Alignment:
Q  78 gaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26442339 gaagggagaacaacaaagttgtctcaaaggttgtaccaaaattgttgttaaaatatcactactc 26442276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 4949193 - 4949121
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| | ||||||||| ||||||    
T  4949193 accaatgagaagaaagaacaacaaagttgtctcaaaagttgtaccaaaatggttatcaaaatatcattactct 4949121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 34538041 - 34538115
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    ||||| ||| |||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  34538041 gaccattgaaaagatagaacaacaaagttgtctcaaaggttgtaccaaaatagttgtcaaaatatcactattctt 34538115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 37732060 - 37732133
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| | |||||||||||| |||||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  37732060 gaccaataaaaagagagaacaataaagttgtttcaaagattgtaccgaaatggttgttaaaatatcactactct 37732133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 55960828 - 55960885
Alignment:
Q  86 aacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  55960828 aacaacaacgttgtctcaaagattgtatcaaaatggttgttaaaatatcactactctt 55960885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 6093555 - 6093495
Alignment:
Q  79 aagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactac 139  Q
    |||||||||||||||| ||||||||||| || ||||||||| |||||||||||||||||||    
T  6093555 aagagagaacaacaaaattgtctcaaagattataccaaaatagttgttaaaatatcactac 6093495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 46686356 - 46686408
Alignment:
Q  89 aacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  46686356 aacaaagttgtatcaaaggttgtaccaaaatggttgtcaaaatatcactactc 46686408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 45418172 - 45418245
Alignment:
Q  69 gaccaatgagaagagagaacaaca--aagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||||| || ||||||||| |  |||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  45418172 gaccaatgaaaatagagaacaatataaagttgtctcaaaggt-gtaccaaaatggtcgttaaaatatcactactc 45418245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 43983008 - 43983074
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    ||||||||||||||||||||||| |  |||||  ||| |||||||||||||||||||| ||||||||    
T  43983008 gaccaatgagaagagagaacaactagattgtcctaaaagttgtaccaaaatggttgttcaaatatca 43983074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 46799866 - 46799932
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    |||||||||||| |||||||||||| |||||| ||||  ||||||||||||| ||||| ||||||||    
T  46799866 gaccaatgagaatagagaacaacaaggttgtcccaaaaattgtaccaaaatgattgttcaaatatca 46799932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 35037718 - 35037767
Alignment:
Q  94 agttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  35037718 agttgtctcaaaggttgtactaaaatgattgtcaaaatatcactactctt 35037767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 45678374 - 45678446
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| | ||||||||||||||| |||||  |||| ||||||||||||| |||||| |||||||| |||||    
T  45678374 gaccaataaaaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactc 45678446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 36947042 - 36946975
Alignment:
Q  79 aagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttt 146  Q
    |||||||||||||||| || |||||||  || || |||||||||||| ||||||||||||||| ||||    
T  36947042 aagagagaacaacaaaattatctcaaaaattatatcaaaatggttgtcaaaatatcactactcatttt 36946975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 50291393 - 50291468
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    ||||||| ||||||||  ||||||| |||||| |||| ||||||||||||  |||||| ||||| |||||||||||    
T  50291393 gaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaataacactactcttt 50291468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 29863663 - 29863737
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    |||||| ||||| |||| |||||| ||||||||||| |||||||||||||  ||||| |||||||| | ||||||    
T  29863663 accaataagaagggagagcaacaatgttgtctcaaaagttgtaccaaaataattgttcaaatatcattgctcttt 29863737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 31318860 - 31318926
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcac 136  Q
    |||||||||||||||||| || ||| |||||| |||||||||||||| ||  |||| ||||||||||    
T  31318860 accaatgagaagagagaagaataaaattgtcttaaaggttgtaccaatataattgtcaaaatatcac 31318926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 18944396 - 18944469
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| ||||||||  |||| || |||||| |||| ||||||||||||  |||||| |||||||||||||||    
T  18944396 gaccaataagaagagaacacaataaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactct 18944469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 42915178 - 42915102
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttta 147  Q
    |||||||| ||||||||| ||  |||||||| |||| |||||| |||| | |||||| ||||||||||||||||||||    
T  42915178 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa-tagttgttcaaatatcactactcttttta 42915102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 54801447 - 54801378
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcacta 138  Q
    ||||||||||||||||||| |||||||||||||||||  || || |||||  |||||| ||||| |||||    
T  54801447 gaccaatgagaagagagaataacaaagttgtctcaaaaattatatcaaaagagttgttcaaataacacta 54801378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 54803290 - 54803250
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggtt 109  Q
    ||||||||| |||||||||||||||||||||||||| ||||    
T  54803290 gaccaatgaaaagagagaacaacaaagttgtctcaatggtt 54803250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 8487746 - 8487821
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    ||||||| | ||||||| ||||||| ||||||||||| |||||| |||||   ||||| |||||||| ||||||||    
T  8487746 gaccaataaaaagagagcacaacaaggttgtctcaaaagttgtagcaaaaaaattgttcaaatatcattactcttt 8487821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 36110245 - 36110320
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 144  Q
    ||||||| ||||||||  ||||||| |||||| ||||  ||||| |||||  |||||| |||||||||||||||||    
T  36110245 gaccaataagaagagaacacaacaaggttgtcccaaaaattgtatcaaaagagttgttcaaatatcactactcttt 36110320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 28676114 - 28676049
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    ||||||||| ||||||||| || || ||||||  |||||||||| ||||||||||||| ||||||||    
T  28676114 gaccaatgaaaagagagaaaaagaaggttgtcaaaaaggttgta-caaaatggttgtttaaatatca 28676049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 33777005 - 33777071
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 135  Q
    ||||||| | ||||||||||||||| ||| || ||||  |||||||||||| |||||| ||||||||    
T  33777005 gaccaataaaaagagagaacaacaaggttatcccaaaaattgtaccaaaatagttgttcaaatatca 33777071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 46355251 - 46355177
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactctt 143  Q
    |||||||||||| |||||| | |||||||||| |||| ||||||| ||||  |||||| ||| | ||||||||||    
T  46355251 gaccaatgagaaaagagaataccaaagttgtcccaaaagttgtacaaaaagagttgttcaaacaacactactctt 46355177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 46791948 - 46791878
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||| |||||||||||  | ||||||||||| |||||| |||||  |||||| |||||||||| ||||    
T  46791948 caatgagtagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatcactcctct 46791878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 31275257 - 31275329
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactct 142  Q
    ||||||||| ||||||||| ||  || ||||| |||| |||||| |||| |||||||| |||||||||||||||    
T  31275257 gaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaa-tggttgttcaaatatcactactct 31275329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 37775387 - 37775318
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcacta 138  Q
    ||||||||| || |||||| ||||| ||||||||||| ||||||| ||||  |||||| ||||| |||||    
T  37775387 gaccaatgataatagagaataacaaggttgtctcaaaagttgtacgaaaagagttgttcaaataacacta 37775318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 145
Target Start/End: Complemental strand, 39241216 - 39241187
Alignment:
Q  116 aaatggttgttaaaatatcactactctttt 145  Q
    ||||||||||||||||||||||||||||||    
T  39241216 aaatggttgttaaaatatcactactctttt 39241187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 5234431 - 5234360
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| | ||||||||| || ||| ||||| |||| |||||| |||| |||||||| ||||||||||||||    
T  5234431 gaccaataaaaagagagaaaaaaaaaattgtcacaaaagttgtatcaaa-tggttgttcaaatatcactactc 5234360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 54622 - 54553
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcacta 138  Q
    ||||||| | |||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  54622 gaccaataaaaagagagaacaacaaagttgtctcaaagattgtaccaaaatagttgtcaaaatatcacta 54553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 1021 - 1085
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatat 133  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||||||| ||||| |||||||    
T  1021 gaccaatgaaaagagagaacaacaaagttatctcaaaagttgtaccaaaatagttgtcaaaatat 1085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 2955 - 3030
Alignment:
Q  72 caatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttta 147  Q
    ||||||||||| ||||||| ||| || |||||||| || ||||||||| ||||| ||||||||||| |||||||||    
T  2955 caatgagaagaaagaacaaaaaaattatctcaaagattataccaaaatagttgtcaaaatatcactcctcttttta 3030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 145158 - 145230
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| ||||||||  ||||||| |||||| |||| ||||||||||||  |||||| ||||||||||||||    
T  145158 gaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 145230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 4810 - 4744
Alignment:
Q  70 accaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcac 136  Q
    |||||||||||||||||| || ||| |||||| |||||||||||||| ||  |||| ||||||||||    
T  4810 accaatgagaagagagaagaataaaattgtcttaaaggttgtaccaatataattgtcaaaatatcac 4744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 1807 - 1735
Alignment:
Q  69 gaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactc 141  Q
    ||||||| ||||||||  | |||||  ||||| |||| ||||||||||||  |||||| ||||||||||||||    
T  1807 gaccaataagaagagaacataacaagattgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 1735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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