View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19927_high_7 (Length: 631)

Name: NF19927_high_7
Description: NF19927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19927_high_7
NF19927_high_7
[»] chr2 (23 HSPs)
chr2 (20-446)||(41636146-41636572)
chr2 (447-623)||(12756837-12757012)
chr2 (471-623)||(45418598-45418750)
chr2 (471-622)||(8147366-8147518)
chr2 (471-623)||(44084603-44084755)
chr2 (471-622)||(771014-771165)
chr2 (471-620)||(42440001-42440150)
chr2 (471-623)||(41251634-41251786)
chr2 (469-620)||(8059336-8059487)
chr2 (471-620)||(16405615-16405764)
chr2 (475-620)||(35962734-35962879)
chr2 (471-623)||(6403804-6403956)
chr2 (471-623)||(31581622-31581774)
chr2 (471-623)||(17445041-17445191)
chr2 (475-620)||(18981635-18981780)
chr2 (471-620)||(32127144-32127293)
chr2 (484-613)||(2285890-2286019)
chr2 (475-623)||(26162702-26162847)
chr2 (475-593)||(2958131-2958248)
chr2 (484-582)||(4555250-4555350)
chr2 (471-570)||(26237972-26238071)
chr2 (471-582)||(7072589-7072704)
chr2 (476-535)||(34905969-34906028)
[»] chr7 (18 HSPs)
chr7 (471-623)||(35090183-35090335)
chr7 (471-623)||(34389056-34389208)
chr7 (484-623)||(37002144-37002283)
chr7 (487-622)||(38638237-38638372)
chr7 (485-623)||(26624775-26624913)
chr7 (471-621)||(8867733-8867883)
chr7 (447-623)||(36658173-36658348)
chr7 (471-620)||(3114099-3114248)
chr7 (471-623)||(36630831-36630983)
chr7 (475-623)||(40920003-40920151)
chr7 (471-620)||(5555502-5555651)
chr7 (471-623)||(33685579-33685731)
chr7 (471-623)||(43184468-43184620)
chr7 (471-621)||(14777109-14777259)
chr7 (471-623)||(8394140-8394292)
chr7 (471-623)||(7002740-7002892)
chr7 (471-623)||(7048611-7048763)
chr7 (527-582)||(10868514-10868571)
[»] chr5 (20 HSPs)
chr5 (471-623)||(17332551-17332703)
chr5 (471-623)||(33430336-33430488)
chr5 (471-623)||(37254656-37254808)
chr5 (471-623)||(12278860-12279012)
chr5 (471-623)||(31680382-31680534)
chr5 (473-611)||(31501728-31501866)
chr5 (469-620)||(10033940-10034091)
chr5 (474-623)||(16155015-16155164)
chr5 (471-623)||(13817992-13818144)
chr5 (475-623)||(43068896-43069044)
chr5 (486-620)||(16333879-16334013)
chr5 (476-620)||(39657509-39657653)
chr5 (471-623)||(26283318-26283470)
chr5 (475-623)||(36293621-36293769)
chr5 (471-623)||(39434711-39434863)
chr5 (471-622)||(1776377-1776528)
chr5 (479-623)||(19985962-19986106)
chr5 (471-607)||(3155647-3155783)
chr5 (475-623)||(36291390-36291538)
chr5 (471-582)||(28801302-28801415)
[»] chr6 (10 HSPs)
chr6 (471-623)||(28996745-28996897)
chr6 (471-623)||(18339121-18339273)
chr6 (473-623)||(29743300-29743450)
chr6 (472-623)||(33229336-33229487)
chr6 (471-620)||(34948761-34948910)
chr6 (469-620)||(13837834-13837985)
chr6 (471-623)||(398632-398784)
chr6 (471-538)||(24697902-24697969)
chr6 (473-552)||(31028435-31028514)
chr6 (470-503)||(3050093-3050126)
[»] chr4 (36 HSPs)
chr4 (471-623)||(3292896-3293048)
chr4 (471-623)||(30216742-30216894)
chr4 (471-623)||(43143584-43143736)
chr4 (473-623)||(44156668-44156818)
chr4 (471-623)||(6690235-6690387)
chr4 (475-611)||(42333788-42333924)
chr4 (471-623)||(10352884-10353036)
chr4 (475-623)||(48989347-48989495)
chr4 (471-621)||(50205079-50205229)
chr4 (471-623)||(25930723-25930875)
chr4 (471-623)||(20129325-20129477)
chr4 (471-623)||(36382346-36382497)
chr4 (484-623)||(35545981-35546120)
chr4 (475-623)||(29995983-29996131)
chr4 (469-623)||(26448066-26448219)
chr4 (471-623)||(30077631-30077783)
chr4 (484-623)||(28877250-28877389)
chr4 (478-620)||(29319708-29319850)
chr4 (491-623)||(1817752-1817884)
chr4 (471-623)||(26439279-26439431)
chr4 (471-623)||(34407284-34407436)
chr4 (471-623)||(43355919-43356071)
chr4 (511-623)||(6235575-6235687)
chr4 (471-623)||(13012203-13012355)
chr4 (471-623)||(47500788-47500940)
chr4 (471-611)||(17511245-17511386)
chr4 (475-620)||(40529034-40529179)
chr4 (534-623)||(13392881-13392970)
chr4 (534-623)||(13396020-13396109)
chr4 (471-582)||(30109971-30110084)
chr4 (475-582)||(48129985-48130087)
chr4 (484-549)||(6254572-6254637)
chr4 (473-556)||(45194193-45194276)
chr4 (471-538)||(27363376-27363443)
chr4 (589-623)||(30110108-30110142)
chr4 (589-623)||(48130111-48130145)
[»] chr3 (18 HSPs)
chr3 (471-623)||(45182996-45183148)
chr3 (471-623)||(11018212-11018364)
chr3 (471-623)||(6930894-6931046)
chr3 (471-623)||(27935193-27935345)
chr3 (471-623)||(19565501-19565653)
chr3 (471-623)||(33040968-33041120)
chr3 (471-623)||(45335890-45336041)
chr3 (475-623)||(19390165-19390313)
chr3 (475-622)||(6269427-6269574)
chr3 (471-623)||(6503569-6503721)
chr3 (471-623)||(34084122-34084274)
chr3 (475-623)||(22968444-22968592)
chr3 (471-623)||(39771805-39771957)
chr3 (471-623)||(40081741-40081891)
chr3 (475-623)||(35514285-35514429)
chr3 (478-582)||(5135291-5135397)
chr3 (575-623)||(22922214-22922262)
chr3 (589-623)||(5135421-5135455)
[»] chr8 (16 HSPs)
chr8 (471-623)||(34136825-34136977)
chr8 (471-623)||(16788025-16788177)
chr8 (471-623)||(4404023-4404175)
chr8 (471-623)||(23402123-23402275)
chr8 (478-623)||(9877242-9877387)
chr8 (471-623)||(3648794-3648946)
chr8 (471-623)||(36408566-36408718)
chr8 (474-620)||(15838304-15838449)
chr8 (471-623)||(29728386-29728538)
chr8 (488-623)||(42230971-42231104)
chr8 (472-623)||(2729196-2729347)
chr8 (471-623)||(39914530-39914681)
chr8 (472-582)||(3435285-3435397)
chr8 (479-549)||(40470567-40470637)
chr8 (589-623)||(40470475-40470509)
chr8 (471-519)||(10397144-10397192)
[»] chr1 (14 HSPs)
chr1 (471-622)||(17445328-17445479)
chr1 (471-623)||(35907567-35907719)
chr1 (471-623)||(3828999-3829150)
chr1 (475-623)||(321377-321525)
chr1 (469-623)||(42310941-42311095)
chr1 (471-623)||(32982056-32982208)
chr1 (471-620)||(7433460-7433609)
chr1 (471-623)||(26144270-26144422)
chr1 (478-582)||(41972314-41972420)
chr1 (485-582)||(33489716-33489815)
chr1 (473-562)||(23313255-23313345)
chr1 (589-623)||(33489839-33489873)
chr1 (589-623)||(41972256-41972290)
chr1 (475-519)||(48901209-48901253)
[»] scaffold0502 (1 HSPs)
scaffold0502 (471-623)||(5245-5397)
[»] scaffold0041 (1 HSPs)
scaffold0041 (475-623)||(52944-53092)
[»] scaffold0154 (1 HSPs)
scaffold0154 (471-623)||(31495-31647)
[»] scaffold0069 (1 HSPs)
scaffold0069 (469-623)||(17855-18009)
[»] scaffold2142 (1 HSPs)
scaffold2142 (471-623)||(537-689)
[»] scaffold0002 (1 HSPs)
scaffold0002 (471-623)||(480457-480609)


Alignment Details
Target: chr2 (Bit Score: 303; Significance: 1e-170; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 20 - 446
Target Start/End: Complemental strand, 41636572 - 41636146
Alignment:
Q  20 ctacaccgtacacattgacatagag---tca--gacctgtgtttttatgaatagactgcgttactttcaaactgaaaaagtgaaactgaaattgttcacg 114  Q
    ||||||||||||| |||||||||||   |||  || | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41636572 ctacaccgtacactttgacatagaggagtcaaagatcagtgtttttatgaatagactgcgttactttcaaactaaaaaagtgaaactgaaattgttcacg 41636473  T
Q  115 tgttgtgttgtttgttcaacacttccactaacgtatagttatattgctttcaatatagagtgaatgaatgattcgatgaacacggctcttgtttcttgca 214  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  41636472 tgttgtgttgtttgttcaacacttcaacaaacgtatagttatattgctttcaatatagagtgaatgaatgattcgatgaacacgtgtcttgtttcttgca 41636373  T
Q  215 tcttagaaaacttttaaaaaacgtaacaacatcacttttgataatgatttagggttgggttttatcggagcttgagaaggaaaacaatgcatcgctaggg 314  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41636372 tcttagaaaacttttaaaaaacgtaacaacatcacttttgataacgatttagggttgggttttatcggagcttgagaaggaaaacaatgcatcgctaggg 41636273  T
Q  315 aatcatttgatagaacctcatccaaggagagaaaaaaagtgtgnnnnnnnnnnnnnnnnacttaagttgcttgaaaacgaggcc-taagttttggagctt 413  Q
    |||||||||||||||||||||||||| ||||||||||||||||                ||||||||||||||||||||||||| ||||||||| |||||    
T  41636272 aatcatttgatagaacctcatccaagaagagaaaaaaagtgtg------tttcttttttacttaagttgcttgaaaacgaggccttaagttttgcagctt 41636179  T
Q  414 ggaatgtcaagtgaattattatgtggataaaca 446  Q
    |||||||||||||||||||||||||||||||||    
T  41636178 ggaatgtcaagtgaattattatgtggataaaca 41636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 447 - 623
Target Start/End: Complemental strand, 12757012 - 12756837
Alignment:
Q  447 caggggcggtttcaccgcccgggatcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaa 546  Q
    ||||||||||||||||||||||   | |||||| || ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||| |||||||    
T  12757012 caggggcggtttcaccgcccggcgac-cccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaa 12756914  T
Q  547 atttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  12756913 atttgagcaatctgaaaattctcacacgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 12756837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 45418598 - 45418750
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||| ||||||| |||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  45418598 tcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 45418697  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  45418698 cacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 45418750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 471 - 622
Target Start/End: Original strand, 8147366 - 8147518
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctg-aaaattctc 569  Q
    |||||||||||| ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  8147366 tcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaaattctc 8147465  T
Q  570 acacgcaaataggtctcggaattttatttagcacactattgacggattcatct 622  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  8147466 acacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 44084755 - 44084603
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||||||||| |||||| ||||||||  ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  44084755 tcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 44084656  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
     ||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  44084655 tacgcaaataggtctcagaattttatttagcacactattgacgggttcatctc 44084603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 471 - 622
Target Start/End: Original strand, 771014 - 771165
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||| ||||||||||||||||||||| ||||| | ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  771014 tcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 771113  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatct 622  Q
    |||||||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  771114 cacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 471 - 620
Target Start/End: Original strand, 42440001 - 42440150
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||| |||    
T  42440001 tcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 42440100  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  42440101 cacgcaaataggtcttgcaattttatttagcacactattgacggattcat 42440150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 41251786 - 41251634
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||| |||    
T  41251786 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 41251687  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| |||||||||||||||||||||||||| | ||||||||    
T  41251686 cacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 41251634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 469 - 620
Target Start/End: Complemental strand, 8059487 - 8059336
Alignment:
Q  469 gatcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattct 568  Q
    |||||||| |||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||| ||||||||||||| |||| ||||||||||    
T  8059487 gatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaaaaagaaaaatttggccaatttgaaaattct 8059388  T
Q  569 cacacgcaaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||| |||||    
T  8059387 cacacacaaatcggtctcggaattttatttagcacacaattgacgggttcat 8059336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 471 - 620
Target Start/End: Original strand, 16405615 - 16405764
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||   ||| ||||| ||| || ||||||||||||| ||||||||||||| |||    
T  16405615 tcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttggacaatctgaaaattgtca 16405714  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    |||||||||| |||| |||||||||||||||||||||||||||| |||||    
T  16405715 cacgcaaataagtcttggaattttatttagcacactattgacgggttcat 16405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 475 - 620
Target Start/End: Original strand, 35962734 - 35962879
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||||||| |||||||||||||||||||||||| |||||||||||   ||| ||||| |||||| ||||||| ||||||||||||||||||| ||||||     
T  35962734 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtcacaca 35962833  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||    
T  35962834 caaataggtcttggaattttatttagcacactattgacgggttcat 35962879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 6403956 - 6403804
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||| ||||||  ||| ||||| ||| || ||||||||||||||||||||||||||| |||    
T  6403956 tcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaatctgaaaattgtca 6403857  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  6403856 cacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 6403804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 31581774 - 31581622
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||| ||||| | ||||| |||||||| ||||||| || |||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||| |||    
T  31581774 tcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 31581675  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  31581674 cacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 31581622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 17445191 - 17445041
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    ||||||| |||| |||||||||||||||||  ||||| ||||||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||| |||    
T  17445191 tcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 17445094  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| |||||||||||||||||||||||||| | ||||||||    
T  17445093 cacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 17445041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 475 - 620
Target Start/End: Original strand, 18981635 - 18981780
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||||||| || ||||||||||||||||||||| ||||||||||||| ||| | ||| |||||| |||||||||||||||||| | |||||| |||||||    
T  18981635 ccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacatttacaaaaagaaaaatttgggcaatttaaaaattgtcacacg 18981734  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||    
T  18981735 caaataggtcttggaattttatttagcacactgttgacgggttcat 18981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 471 - 620
Target Start/End: Complemental strand, 32127293 - 32127144
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||| ||||||||||||||||| || | |||||||||   ||| ||||| |||||| ||||||||||| ||||||||||||||| |||    
T  32127293 tcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacatttacaaaaagaaaaatttaggcaatctgaaaattgtca 32127194  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| |||||    
T  32127193 cacgcaaatagatcttggaattttatttagcacactattgacgggttcat 32127144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 613
Target Start/End: Original strand, 2285890 - 2286019
Alignment:
Q  484 atcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgcaaataggt 583  Q
    ||||||||||||||||||||| | |||||| ||||||| ||| ||||| |||| | | |||||||||| |||||||||||||| ||||||||||||||||    
T  2285890 atcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaataggt 2285989  T
Q  584 ctcggaattttatttagcacactattgacg 613  Q
     | |||||||||||||||||||||||||||    
T  2285990 tttggaattttatttagcacactattgacg 2286019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 475 - 623
Target Start/End: Complemental strand, 26162847 - 26162702
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    ||||||||  |||||||||||| ||||||| |  ||||||||||  | ||| |||||||||||| |||||||||||||||||||| |||||||||| ||     
T  26162847 ccgggctccttcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaaca 26162748  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||   |||||||||||| ||||||||| ||||||||    
T  26162747 caaataggtctcgga---ttatttagcacattattgacgggttcatctc 26162702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 475 - 593
Target Start/End: Complemental strand, 2958248 - 2958131
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||| | ||| ||||| ||||||  ||||||||||||| |||||||||||| |||||||    
T  2958248 ccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacatttacaaagagaaaaatttgggtaatctgaaaattgtcacacg 2958150  T
Q  575 caaataggtctcggaattt 593  Q
    ||||||||||| |||||||    
T  2958149 caaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 484 - 582
Target Start/End: Complemental strand, 4555350 - 4555250
Alignment:
Q  484 atcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggc--aatctgaaaattctcacacgcaaatag 581  Q
    ||||||||||||||||||| | ||||||||||||||    || |||||||||||| ||||||| |||||||  |||||||||||||||||||| ||||||    
T  4555350 atcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaagaaaattttgggcaaaatctgaaaattctcacacgtaaatag 4555251  T
Q  582 g 582  Q
    |    
T  4555250 g 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 471 - 570
Target Start/End: Original strand, 26237972 - 26238071
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggc-aatctgaaaattctc 569  Q
    |||||||||||| ||||||| |||||||| ||||||  ||| ||||||||| ||| |||||||||||| ||||||||||||||| |||||||||| ||||    
T  26237972 tcgcccgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttgggcaaatctgaaaactctc 26238070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 471 - 582
Target Start/End: Complemental strand, 7072704 - 7072589
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatt--tacacacttacaagaagaaaaatttgggcaa--tctgaaaatt 566  Q
    |||||||||||| |||||||||||||  |||||| || ||||||||||| | |||   ||||||||| || |||||||  |||| |||  ||||||||||    
T  7072704 tcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctgaaaatt 7072605  T
Q  567 ctcacacgcaaatagg 582  Q
    ||| |||| |||||||    
T  7072604 ctcgcacgtaaatagg 7072589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 535
Target Start/End: Original strand, 34905969 - 34906028
Alignment:
Q  476 cgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacactta 535  Q
    ||||||| |||||||||||||||||||||  || |||||||||| | ||| |||||||||    
T  34905969 cgggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacacactta 34906028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 2e-66; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 35090183 - 35090335
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  35090183 tcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaattctca 35090282  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35090283 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 35090335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 34389208 - 34389056
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||  |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  34389208 tcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 34389109  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  34389108 cacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctc 34389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 484 - 623
Target Start/End: Complemental strand, 37002283 - 37002144
Alignment:
Q  484 atcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgcaaataggt 583  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37002283 atcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggt 37002184  T
Q  584 ctcggaattttatttagcacactattgacggattcatctc 623  Q
    || |||||||||||||||||||||||||||| ||||||||    
T  37002183 cttggaattttatttagcacactattgacgggttcatctc 37002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 487 - 622
Target Start/End: Complemental strand, 38638372 - 38638237
Alignment:
Q  487 gataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctc 586  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38638372 gataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctc 38638273  T
Q  587 ggaattttatttagcacactattgacggattcatct 622  Q
    |||||||||||||||||||||||||||| |||||||    
T  38638272 ggaattttatttagcacactattgacgggttcatct 38638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 485 - 623
Target Start/End: Original strand, 26624775 - 26624913
Alignment:
Q  485 tcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 584  Q
    ||||||||||||||| ||||||||||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26624775 tcgataatttttgcatattagacccaatccaaaagttaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 26624874  T
Q  585 tcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  26624875 tcggaattttatttagcacactattgacgggttcatctc 26624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 471 - 621
Target Start/End: Complemental strand, 8867883 - 8867733
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||||| ||||| | ||| |||||| ||||||||||||||||||| ||||||| |||    
T  8867883 tcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaaaaagaaaaatttgggcaatcggaaaattttca 8867784  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatc 621  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8867783 cacgcaaataggtctcggaattttatttagcacactattgacggattcatc 8867733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 447 - 623
Target Start/End: Original strand, 36658173 - 36658348
Alignment:
Q  447 caggggcggtttcaccgcccgggatcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaa 546  Q
    |||||||||||||||||||| |   | ||||| ||| |||||||||||||||||||| ||||||||| ||||| ||||| ||| ||| |||| || ||||    
T  36658173 caggggcggtttcaccgcccagcgac-cccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaa 36658271  T
Q  547 atttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36658272 atttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 36658348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 471 - 620
Target Start/End: Complemental strand, 3114248 - 3114099
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||| |||    
T  3114248 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 3114149  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    ||| ||||||||||| |||||||||||||||||||||||||||| |||||    
T  3114148 cacacaaataggtcttggaattttatttagcacactattgacgggttcat 3114099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 36630831 - 36630983
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||||||||| || ||||| ||||||| ||| ||||| |||||| ||||||||||||||||||||||||||| |||    
T  36630831 tcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 36630930  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  36630931 cacgcaaataggtcttggaattttagttagcacactattgacgggttcatctc 36630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 475 - 623
Target Start/End: Complemental strand, 40920151 - 40920003
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||||||| |||||||||||||||||||||||   |||||||||| ||||| ||||| |||||| ||||||||||||| ||||||||||||||||||| |    
T  40920151 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 40920052  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40920051 caaataggtctcggaattttatttagcacactattgacgggttcatctc 40920003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 471 - 620
Target Start/End: Original strand, 5555502 - 5555651
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| | ||| || || |||||| ||||||||||||||||||||||||||| |||    
T  5555502 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcatttacaaaaagaaaaatttgggcaatctgaaaattgtca 5555601  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    ||| ||||||||||| |||||||||||||||||||||||||||| |||||    
T  5555602 cacacaaataggtcttggaattttatttagcacactattgacgggttcat 5555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 33685579 - 33685731
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||| ||||||| ||||||||||||||||||||| |||||||||||||| | ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  33685579 tcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 33685678  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
     ||||||||| |||||  |||||||||||||||||||||||||| || |||||    
T  33685679 tacgcaaatatgtctcataattttatttagcacactattgacgggtttatctc 33685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 43184620 - 43184468
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||| ||||||| ||||||||||||| | ||| ||||  |||||||||| ||||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  43184620 tcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctca 43184521  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  43184520 cacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 43184468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 471 - 621
Target Start/End: Complemental strand, 14777259 - 14777109
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||   ||| ||||| |||||| ||||||||||||||||||||||||||| |||    
T  14777259 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 14777160  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatc 621  Q
    |||| |||||||||| |||||||||||||||||||||||||| | ||||||    
T  14777159 cacgtaaataggtcttggaattttatttagcacactattgacagtttcatc 14777109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 8394140 - 8394292
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||||||||| || ||||| ||||||| ||| ||||| |||||| | ||||||||||||||||||||||||| |||    
T  8394140 tcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggcaatctgaaaattgtca 8394239  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| |||||||||||||||||||||||||||| || |||||    
T  8394240 cacgtaaataggtcttggaattttatttagcacactattgacgggtttatctc 8394292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 7002740 - 7002892
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||  ||||||  |||||| |||||||||||||| ||||| |||||| ||||| || |||||||||| |||||| ||||||||||    
T  7002740 tcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggacaatctaaaaattctca 7002839  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  7002840 cacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 7048611 - 7048763
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||  ||||||  |||||| |||||||||||||| ||||| |||||| ||||| || |||||||||| |||||| ||||||||||    
T  7048611 tcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggacaatctaaaaattctca 7048710  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  7048711 cacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 527 - 582
Target Start/End: Complemental strand, 10868571 - 10868514
Alignment:
Q  527 acacacttacaagaagaaaaatttgggcaa--tctgaaaattctcacacgcaaatagg 582  Q
    ||||| |||||| |||||||||||||||||  ||||||||||||||| ||||||||||    
T  10868571 acacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 2e-66; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 17332703 - 17332551
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||| |||    
T  17332703 tcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattttca 17332604  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17332603 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 17332551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 33430336 - 33430488
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  33430336 tcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 33430435  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33430436 cacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33430488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 37254656 - 37254808
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  37254656 tcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 37254755  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  37254756 cacgcaaataggtctcggaattttatttagcacattattgacgggttcatctc 37254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 12279012 - 12278860
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||| | ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  12279012 tcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 12278913  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  12278912 cacgcaaataggtctcggaattttatttagcacactattgacaggttcatctc 12278860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 31680382 - 31680534
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  31680382 tcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 31680481  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    || ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31680482 catgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 31680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 473 - 611
Target Start/End: Complemental strand, 31501866 - 31501728
Alignment:
Q  473 gcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcaca 572  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| ||    
T  31501866 gcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcgca 31501767  T
Q  573 cgcaaataggtctcggaattttatttagcacactattga 611  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  31501766 cgcaaataggtctcgaaattttatttagcacactattga 31501728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 469 - 620
Target Start/End: Original strand, 10033940 - 10034091
Alignment:
Q  469 gatcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattct 568  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||| |    
T  10033940 gatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgt 10034039  T
Q  569 cacacgcaaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  10034040 cacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 10034091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 474 - 623
Target Start/End: Original strand, 16155015 - 16155164
Alignment:
Q  474 cccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacac 573  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||| | ||| ||||| ||| || ||||||||||| ||||||||||||||| ||||||    
T  16155015 cccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacac 16155114  T
Q  574 gcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  16155115 gcaaataggtcttggaattttatttagcacactattgacagattcatctc 16155164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 13817992 - 13818144
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||| ||||||| |||||||||||||||||||||||| ||||||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||| |||    
T  13817992 tcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 13818091  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||| |||| |||||||||||||||||||||||  |||||||    
T  13818092 cacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctc 13818144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 43068896 - 43069044
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||||||| ||| ||||||||| |||||||||||||||||||||||| ||| ||||| |||||| ||||||||||||||||||||||||||||| ||| |    
T  43068896 ccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatg 43068995  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
     ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  43068996 taaataagtctcggaattttatttagcacactattgccggattcatctc 43069044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 486 - 620
Target Start/End: Complemental strand, 16334013 - 16333879
Alignment:
Q  486 cgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtct 585  Q
    |||||||||||||||||||||  ||||||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  586 cggaattttatttagcacactattgacggattcat 620  Q
     ||||||||||||||||||||||||||||||||||    
T  16333913 tggaattttatttagcacactattgacggattcat 16333879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 39657653 - 39657509
Alignment:
Q  476 cgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgc 575  Q
    ||||||| || ||||||||||||||||||||| |||||||||||   ||| ||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  39657653 cgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgc 39657554  T
Q  576 aaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    |||||||||| |||||||||||||||||||||||||||| |||||    
T  39657553 aaataggtcttggaattttatttagcacactattgacgggttcat 39657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 26283470 - 26283318
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||| ||||||  ||| ||||| ||| || ||||||||||||||||||||||||||| |||    
T  26283470 tcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaatctgaaaattgtca 26283371  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  26283370 cacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26283318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 475 - 623
Target Start/End: Complemental strand, 36293769 - 36293621
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||| ||| |||||||||||||| ||||||||| ||||||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||| |||||||    
T  36293769 ccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacg 36293670  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
     |||||||||| ||||||||||||||||||||||| || | ||||||||    
T  36293669 taaataggtcttggaattttatttagcacactatttacagtttcatctc 36293621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 39434711 - 39434863
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||||||| | ||| ||||| |||||| | ||||||||||||||||||||||||| |||    
T  39434711 tcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaatgaaaaatttgggcaatctgaaaattgtca 39434810  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    || | ||||||||||  ||||||||||||||||||||||||| | ||||||||    
T  39434811 catgtaaataggtctttgaattttatttagcacactattgacagtttcatctc 39434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 471 - 622
Target Start/End: Complemental strand, 1776528 - 1776377
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||| |||||| |  ||||| ||||||| ||| ||||| |||||| |||||||||||||||||| |||||||| |||    
T  1776528 tcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtca 1776429  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatct 622  Q
    ||||||||||||||| |||||||||||||||||||||| ||| | |||||||    
T  1776428 cacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 479 - 623
Target Start/End: Original strand, 19985962 - 19986106
Alignment:
Q  479 gctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgcaaa 578  Q
    |||| |||||||||||||||||||||||  ||||||||||||| |||  |||| |||||| |||||||||||||| ||||| |||||| |||||||||||    
T  19985962 gctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaatctaaaaattatcacacgcaaa 19986061  T
Q  579 taggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||| | ||||||||||| |||||||||||| | ||||||||    
T  19986062 taggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 471 - 607
Target Start/End: Complemental strand, 3155783 - 3155647
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||| ||||||| ||| |||||||||||||||| ||| ||||| ||||||| ||| ||||| ||| || ||||||||||||| ||||||||||||| |||    
T  3155783 tcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacatttataaaaagaaaaatttggacaatctgaaaattgtca 3155684  T
Q  571 cacgcaaataggtctcggaattttatttagcacacta 607  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  3155683 cacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 36291390 - 36291538
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    ||||| || ||| ||||||||||||||||||| | |||| ||||||  ||| ||||| |||||| |||||||||||||||||||| |||||| | ||||     
T  36291390 ccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaaaaagaaaaatttgggcaatctcaaaattattacaca 36291489  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  36291490 caaataggtctcagaattttatttaacacactattgacgggttcatctc 36291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 471 - 582
Target Start/End: Original strand, 28801302 - 28801415
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttggg--caatctgaaaattct 568  Q
    |||||| ||||| ||||||||||||||||||||||| |||| ||||||| | ||| |||||||||||| ||||||||||||||   ||| ||||||||||    
T  28801302 tcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaattct 28801401  T
Q  569 cacacgcaaatagg 582  Q
    ||||||||||||||    
T  28801402 cacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 5e-64; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 28996745 - 28996897
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    ||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  28996745 tcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 28996844  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28996845 cacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 28996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 18339121 - 18339273
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||| |||||||||||||||||||||||| | ||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  18339121 tcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctca 18339220  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    || ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18339221 catgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 18339273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 473 - 623
Target Start/End: Original strand, 29743300 - 29743450
Alignment:
Q  473 gcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcaca 572  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  ||| ||||| |||||  ||||||||||||||||||||||||||||| |||    
T  29743300 gcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacagaaagaaaaatttgggcaatctgaaaattcttaca 29743399  T
Q  573 cgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  29743400 cgcaaataggtctcggaattttatttagcacactagtgccggattcatctc 29743450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 472 - 623
Target Start/End: Complemental strand, 33229487 - 33229336
Alignment:
Q  472 cgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcac 571  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||||| ||| ||||| || ||| ||||||||||||||||||||||||||||| ||    
T  33229487 cgcccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttac 33229388  T
Q  572 acgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  33229387 acgtaaataagtctcgggattttatttagcacactattgccggattcatctc 33229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 471 - 620
Target Start/End: Complemental strand, 34948910 - 34948761
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||| |||    
T  34948910 tcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 34948811  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    ||| ||||||| ||| | |||||||||||||||||||||||||| |||||    
T  34948810 cacacaaatagatcttgaaattttatttagcacactattgacgggttcat 34948761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 469 - 620
Target Start/End: Original strand, 13837834 - 13837985
Alignment:
Q  469 gatcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattct 568  Q
    |||||| |||| || |||||||||||||| ||||||||| |||||||||||   ||  ||||| |||||| ||||||||||||||||||||||||||| |    
T  13837834 gatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacatttacaaaaagaaaaatttgggcaatctgaaaattgt 13837933  T
Q  569 cacacgcaaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  13837934 cacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 13837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 398632 - 398784
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||||   ||| ||||| ||| || |||||||||||||||||| |||||||| |||    
T  398632 tcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaattgtca 398731  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  398732 cacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 471 - 538
Target Start/End: Complemental strand, 24697969 - 24697902
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaa 538  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| | ||| ||||||||||||    
T  24697969 tcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaa 24697902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 552
Target Start/End: Complemental strand, 31028514 - 31028435
Alignment:
Q  473 gcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgg 552  Q
    |||||| ||| ||||||||||||||||||||||| |||||| |||||   ||| ||||| |||||| ||| ||| |||||    
T  31028514 gcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaaggaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 503
Target Start/End: Original strand, 3050093 - 3050126
Alignment:
Q  470 atcgcccgggctcaatcgataatttttgcacatt 503  Q
    ||||||||||||||||| ||||||||||||||||    
T  3050093 atcgcccgggctcaatcaataatttttgcacatt 3050126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 5e-64; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 3293048 - 3292896
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  3293048 tcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 3292949  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  3292948 cacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 3292896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 30216894 - 30216742
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||  |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  30216894 tcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 30216795  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    || |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  30216794 catgcaaatagatctcggaattttatttagcacactattgacgggttcatctc 30216742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 43143736 - 43143584
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  43143736 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 43143637  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||||||||||||||||||||||| ||||| || ||||||||    
T  43143636 cacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 43143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 473 - 623
Target Start/End: Original strand, 44156668 - 44156818
Alignment:
Q  473 gcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcaca 572  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||| ||||| |||||||||||||||| ||    
T  44156668 gcccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctca 44156767  T
Q  573 cgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 44156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 6690387 - 6690235
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  6690387 tcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaaactgaaaattctca 6690288  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  6690287 cacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctc 6690235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 475 - 611
Target Start/End: Complemental strand, 42333924 - 42333788
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  42333924 ccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 42333825  T
Q  575 caaataggtctcggaattttatttagcacactattga 611  Q
    ||||||||||||||||||||||||||||||| |||||    
T  42333824 caaataggtctcggaattttatttagcacacaattga 42333788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 10353036 - 10352884
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||| |||||| | ||||||||||||||||||||||||||| |    
T  10353036 tcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggcaatctgaaaattctta 10352937  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||||||||||||||||||||||| | || ||||||||||||    
T  10352936 cacgcaaataggtctcggaattttatttagcacaccagtgtcggattcatctc 10352884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 48989347 - 48989495
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    ||||| || ||||||||||||||||||||| ||||||| |||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||| |||    
T  48989347 ccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcatacg 48989446  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48989447 caaataggtctcggaattttatttagcacactattgacgggttcatctc 48989495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 471 - 621
Target Start/End: Complemental strand, 50205229 - 50205079
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||||||| ||||| |||||||||||| |||||||| |||| |||||||||||||||||    
T  50205229 tcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaaaaagaaaaaattggacaatctgaaaattctca 50205130  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatc 621  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  50205129 cacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 50205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 25930723 - 25930875
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||| ||||||||||||||||| || ||||||||||| | ||| ||||| |||||| |||||||||||||||||| |||||||| |||    
T  25930723 tcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtca 25930822  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  25930823 cacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 25930875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 20129325 - 20129477
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||| |||    
T  20129325 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 20129424  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| ||||||||||  ||||||||||| ||||||||||||| | ||||||||    
T  20129425 cacgtaaataggtcttagaattttatttggcacactattgacagtttcatctc 20129477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 36382497 - 36382346
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||| ||||||||||||||||| || ||||| ||||||| ||| ||||| |||||| ||||||||||||| ||||||||||||| |||    
T  36382497 tcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaa-aagaaaaatttggacaatctgaaaattgtca 36382399  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  36382398 cacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 36382346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 484 - 623
Target Start/End: Original strand, 35545981 - 35546120
Alignment:
Q  484 atcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgcaaataggt 583  Q
    ||||| ||||||||| ||| |||||||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||    
T  35545981 atcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaatgggt 35546080  T
Q  584 ctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||| |||||||||||||||||||||||| || ||||||||    
T  35546081 ctctgaattttatttagcacactattgatgggttcatctc 35546120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 475 - 623
Target Start/End: Complemental strand, 29996131 - 29995983
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||| ||| |||||||||||||| ||||||||| ||||| ||||||| ||| ||||| |||| | |||||||||||||||||||||||||||||  ||||    
T  29996131 ccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacgaaaagaaaaatttgggcaatctgaaaattcttgcacg 29996032  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  29996031 caaatagttctcggaattttattaagcacactattgacggattcatctc 29995983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 469 - 623
Target Start/End: Original strand, 26448066 - 26448219
Alignment:
Q  469 gatcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattct 568  Q
    ||||| |||| ||| ||||||||||||||||||||| | | |||||||||||| ||| |||||||||||| || ||||||||||||||||||||||||||    
T  26448066 gatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaaaaa-aaaaatttgggcaatctgaaaattct 26448164  T
Q  569 cacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    || || ||||||||| |||||||||||||||||||||||||| |||||| |||||    
T  26448165 catacacaaataggtttcggaattttatttagcacactattggcggatttatctc 26448219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 30077783 - 30077631
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||||  ||| ||||| |||||| ||||||||||||| ||||||||||||| | |    
T  30077783 tcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaaaaagaaaaatttggacaatctgaaaattttta 30077684  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||| ||||||||||| | ||||||||||||||||||| || ||||||||||||    
T  30077683 cacacaaataggtcttgaaattttatttagcacactagtgccggattcatctc 30077631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 484 - 623
Target Start/End: Complemental strand, 28877389 - 28877250
Alignment:
Q  484 atcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgcaaataggt 583  Q
    |||||||||||||||||||||||  ||||| |||||  |||| |||| |||| || |||||||||||||| ||||| |||||||||||||||||||||||    
T  28877389 atcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataaaaagaaaaatttgggaaatctaaaaattctcacacgcaaataggt 28877290  T
Q  584 ctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  28877289 ctcggaattttatttagcacactattgatgggttcatctc 28877250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 478 - 620
Target Start/End: Complemental strand, 29319850 - 29319708
Alignment:
Q  478 ggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgcaa 577  Q
    ||||| |||||||||||||||||||||||| ||||||||||  | ||| ||||| |||||| |||||||||||| |||||||||||||| |||||| |||    
T  29319850 ggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacatttacaaaaagaaaaatttgagcaatctgaaaattgtcacacacaa 29319751  T
Q  578 ataggtctcggaattttatttagcacactattgacggattcat 620  Q
    ||| |||| |||||||||||||||||||||||||||| |||||    
T  29319750 ataagtcttggaattttatttagcacactattgacgggttcat 29319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 491 - 623
Target Start/End: Original strand, 1817752 - 1817884
Alignment:
Q  491 atttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaa 590  Q
    |||||||||||||||| |||| ||||||||| ||| | ||| ||| || |||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  591 ttttatttagcacactattgacggattcatctc 623  Q
    ||||||||| |||||||||| ||||||||||||    
T  1817852 ttttatttaacacactattgtcggattcatctc 1817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 26439431 - 26439279
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||||| | ||| ||||| ||| || ||||||||||||||||||||||||||| |||    
T  26439431 tcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaatctgaaaattgtca 26439332  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| | ||||||||||  |||||||||||| | ||||||||    
T  26439331 cacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 26439279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 34407436 - 34407284
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||||| | ||| ||||| ||| || ||||||||||||||||||||||||||| |||    
T  34407436 tcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaatctgaaaattgtca 34407337  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| | ||||||||||  |||||||||||| | ||||||||    
T  34407336 cacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 34407284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 43355919 - 43356071
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||||| | ||| ||||| ||| || ||||||||||||||||||||||||||| |||    
T  43355919 tcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaatctgaaaattgtca 43356018  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| | ||||||||||  |||||||||||| | ||||||||    
T  43356019 cacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 43356071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 511 - 623
Target Start/End: Original strand, 6235575 - 6235687
Alignment:
Q  511 acccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattg 610  Q
    ||||||||||| ||| ||||| |||||| |||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  6235575 acccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattg 6235674  T
Q  611 acggattcatctc 623  Q
    |||| ||||||||    
T  6235675 acgggttcatctc 6235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 13012203 - 13012355
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||  ||||| |||||   ||| ||||| ||| || |||||||||||||||||| |||||||| |||    
T  13012203 tcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaattgtca 13012302  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  13012303 cacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 13012355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 47500788 - 47500940
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||||   ||| ||||| |||  | |||||||||||||||||| |||||||| |||    
T  47500788 tcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttatgaaaagaaaaatttgggcaatttgaaaattgtca 47500887  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  47500888 cacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 47500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 471 - 611
Target Start/End: Complemental strand, 17511386 - 17511245
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||| | ||| |||||||||||||||||||||||| ||||||||||| | ||| ||||| |||||| |||||||||||||||||| |||||||| | |    
T  17511386 tcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtta 17511287  T
Q  571 cacgcaaataggtctcgg-aattttatttagcacactattga 611  Q
    ||||||||||||||| || |||||||||||||||| ||||||    
T  17511286 cacgcaaataggtcttggaaattttatttagcacattattga 17511245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 475 - 620
Target Start/End: Original strand, 40529034 - 40529179
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||| ||| ||||||||||||||||||||| || ||||| ||||    ||| ||||| |||||| ||||||||||||| |||| |||||||| ||||| |    
T  40529034 ccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttacaaaaagaaaaatttggacaatttgaaaattgtcacatg 40529133  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||    
T  40529134 caaataggtcttggaattttatttagcacactattgacgggttcat 40529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 534 - 623
Target Start/End: Complemental strand, 13392970 - 13392881
Alignment:
Q  534 tacaagaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgaatgattcatctc 13392881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 534 - 623
Target Start/End: Complemental strand, 13396109 - 13396020
Alignment:
Q  534 tacaagaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgaatgattcatctc 13396020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 471 - 582
Target Start/End: Original strand, 30109971 - 30110084
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggc--aatctgaaaattct 568  Q
    |||||||| ||| |||||||||||||||||||||||||||| || |||| | ||| |||||||||||| ||||||||||||| |  ||| |||||| |||    
T  30109971 tcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaaaaatttggacaaaatatgaaaaatct 30110070  T
Q  569 cacacgcaaatagg 582  Q
    ||||||||||||||    
T  30110071 cacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 475 - 582
Target Start/End: Original strand, 48129985 - 48130087
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||||||| |||||||||||||||| |||||||||||||||||||   ||| |||||||||||| ||||||||||||||     |||||| |||||||||    
T  48129985 ccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg-----tgaaaactctcacacg 48130079  T
Q  575 caaatagg 582  Q
    ||||||||    
T  48130080 caaatagg 48130087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 549
Target Start/End: Original strand, 6254572 - 6254637
Alignment:
Q  484 atcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatt 549  Q
    ||||||||||||||||||||| |||||||||||||| ||||| |||||||| ||| || |||||||    
T  6254572 atcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 473 - 556
Target Start/End: Original strand, 45194193 - 45194276
Alignment:
Q  473 gcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaa 556  Q
    |||||| ||| ||| ||||||||||||||||| || ||||||||||||| ||| |||||||||||| || ||||  ||||||||    
T  45194193 gcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaaaaaaaaaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 538
Target Start/End: Original strand, 27363376 - 27363443
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaa 538  Q
    |||||||||||| |||||   |||||||| ||||| ||||||||||||| | ||| ||||||||||||    
T  27363376 tcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaa 27363443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 589 - 623
Target Start/End: Original strand, 30110108 - 30110142
Alignment:
Q  589 aattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||| ||||||||    
T  30110108 aattttatttagcacactattgacgggttcatctc 30110142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 589 - 623
Target Start/End: Original strand, 48130111 - 48130145
Alignment:
Q  589 aattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||| ||||||||    
T  48130111 aattttatttagcacactattgacgggttcatctc 48130145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 5e-64; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 45182996 - 45183148
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  45182996 tcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 45183095  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45183096 cacacaaataggtctcggaattttatttagcacactattgacgggttcatctc 45183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 11018364 - 11018212
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  11018364 tcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 11018265  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||| |||||||||||||||||| |||||||| ||||||||    
T  11018264 cacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctc 11018212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 6931046 - 6930894
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||| ||||||| |||||||||||| ||||| ||||| |||||| ||||||||||| |||||||||||||||||||    
T  6931046 tcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaaaaagaaaaatttaggcaatctgaaaattctca 6930947  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  6930946 cacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 6930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 27935193 - 27935345
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||   ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  27935193 tcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 27935292  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
     ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  27935293 tacgaaaataggtctcggaattttatttagcatactattgacgggttcatctc 27935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 19565653 - 19565501
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| || ||| ||||| |||||| ||||||||||||| ||||||||||||||| |    
T  19565653 tcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaaaaagaaaaatttggacaatctgaaaattctta 19565554  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  19565553 cacgcaaataggtctcggaattttatttagcacactagtaccggattcatctc 19565501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 33040968 - 33041120
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||| ||||||| || ||||||||||||| |||||||||||||||||||  |||| |||||||||||| ||||||||||||  |||| |||||||| |||    
T  33040968 tcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgaacaatttgaaaattttca 33041067  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33041068 cacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33041120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 45335890 - 45336041
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||| ||||||||||||||||| |||||||||||||||| |||||||| || ||||| |||||| ||||||||| ||||||||||||||||||| |    
T  45335890 tcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtca-ttaacacatttacaaaaagaaaaatctgggcaatctgaaaattctta 45335988  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||| ||||||||||||||||||||| || ||||||||||||    
T  45335989 cacgcaaataggtcttggaattttatttagcacactagtgccggattcatctc 45336041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 19390165 - 19390313
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    ||||| || |||||||||||||||||||||||| ||||| ||||||| ||| ||||| |||||| ||||||||||||||||||||||||||| |||||||    
T  19390165 ccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacg 19390264  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
     |||||||||| |||||||||||||||||||||||||| | ||||||||    
T  19390265 taaataggtcttggaattttatttagcacactattgacagtttcatctc 19390313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 475 - 622
Target Start/End: Complemental strand, 6269574 - 6269427
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||| ||| |||||||||||||||||||||||| ||||||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||| |||||||    
T  6269574 ccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacg 6269475  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatct 622  Q
     |||||||||| |||||||||||||||||||||||||| | |||||||    
T  6269474 taaataggtcttggaattttatttagcacactattgacagtttcatct 6269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 6503721 - 6503569
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||| ||||||||| ||||||| ||||||||||| |||||  ||||||||||| |||||||||||  ||||||||||||||||||    
T  6503721 tcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacacttacaaaaagaaaaatttaagcaatctgaaaattctca 6503622  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    || |||||||||||||||| ||||||||||||||| ||||| || ||||||||    
T  6503621 caggcaaataggtctcggatttttatttagcacacaattgatgggttcatctc 6503569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 34084274 - 34084122
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||| ||| ||||||||||||||||||||| |  ||||| ||||||| ||| ||||| |||||| |||||||||||||||||| |||||||| |||    
T  34084274 tcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaatatgaaaattatca 34084175  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  34084174 cacgcaaataggtcttggaattttatttagcacactattgatgggttcatctc 34084122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 475 - 623
Target Start/End: Complemental strand, 22968592 - 22968444
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| | ||| ||||| |||||| |||||||||||||||||||| |||||| |||||||    
T  22968592 ccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctaaaaattgtcacacg 22968493  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
     |||||||||| | |||||||||||||||||||||||| | ||||||||    
T  22968492 taaataggtcttgaaattttatttagcacactattgacagtttcatctc 22968444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 39771805 - 39771957
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||||| | ||| ||||| ||| || ||||||||||||||||||||||||||| |||    
T  39771805 tcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaatctgaaaattgtca 39771904  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| | ||||||||||  |||||||||||| | ||||||||    
T  39771905 cacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 39771957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 40081891 - 40081741
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||| ||||||||| ||||| |||  ||| || ||||| |||||| |||||||||||||||||| |||||||| |||    
T  40081891 tcgcccgggctcgatcgataatttttgaacattagactcaaccaaaagctca-ttaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtca 40081793  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||| ||| || ||||| ||||||||||||||||||| ||||||||    
T  40081792 cacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctc 40081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 35514285 - 35514429
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||||||| |||||||||||| ||| | |||| |||||||||||||| ||| ||||||    || ||||||||||||| |||| ||||||||||||| ||    
T  35514285 ccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacacac----aaaaagaaaaatttggacaatatgaaaattctcactcg 35514380  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  35514381 caaataggtctaggaattttattttgcacactattgacgggttcatctc 35514429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 478 - 582
Target Start/End: Original strand, 5135291 - 5135397
Alignment:
Q  478 ggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggc--aatctgaaaattctcacacgc 575  Q
    ||||| |||||| ||||||| ||||||||||||||| |||||   ||| |||||||||||| ||||||||||||| |  |||| |||||||||||||| |    
T  5135291 ggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacac 5135390  T
Q  576 aaatagg 582  Q
    |||||||    
T  5135391 aaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 623
Target Start/End: Original strand, 22922214 - 22922262
Alignment:
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||| ||| ||||||||||||| |||||||||||||| ||||||||    
T  22922214 caaatagatcttggaattttatttaacacactattgacgggttcatctc 22922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 589 - 623
Target Start/End: Original strand, 5135421 - 5135455
Alignment:
Q  589 aattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||| ||||||||    
T  5135421 aattttatttagcacactattgacgggttcatctc 5135455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 1e-61; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 34136977 - 34136825
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  34136977 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 34136878  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  34136877 cacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctc 34136825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 16788177 - 16788025
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||| |||| |||||    
T  16788177 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatcttaaaactctca 16788078  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  16788077 cacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 16788025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 4404023 - 4404175
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| ||| |||||||| |||||||||||||||||||| ||||||||||    
T  4404023 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctaaaaattctca 4404122  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||||||||||||||||||||||| ||||| || ||||||||    
T  4404123 cacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 4404175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 23402123 - 23402275
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  23402123 tcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 23402222  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||||| ||||||||||| |||||||||||| | ||||||||    
T  23402223 cacgcaaataggtctcgaaattttatttaacacactattgactggttcatctc 23402275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 478 - 623
Target Start/End: Original strand, 9877242 - 9877387
Alignment:
Q  478 ggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgcaa 577  Q
    ||||| || |||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  578 ataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||| |||||||||||||||||||||| |  |||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattgtcaaattcatctc 9877387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 3648946 - 3648794
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||||||| | ||| ||||| |||||| ||||||| ||||||||||||||||||| |||    
T  3648946 tcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtca 3648847  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||| ||||| | |||||||||||||||||||||||||||| ||||||||    
T  3648846 cacgcaagtaggttttggaattttatttagcacactattgacgggttcatctc 3648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 36408566 - 36408718
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||| ||||| |||||| ||||||| ||| |||||| |||||||||| |    
T  36408566 tcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaagaaaatttttggcaatttgaaaattctta 36408665  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||| |||||||||| |||||||||||| |||||||||| ||||||||||||    
T  36408666 cacgctaataggtctcagaattttatttaacacactattgccggattcatctc 36408718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 474 - 620
Target Start/End: Original strand, 15838304 - 15838449
Alignment:
Q  474 cccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacac 573  Q
    ||||||||| || |||||||||||||||||| || ||||| ||||||| ||| ||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  15838304 cccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaa-aagaaaaatttgggcaatctgaaaattttcacac 15838402  T
Q  574 gcaaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||    
T  15838403 gcaaataggtcttggaattttatttagcacactattgacgggttcat 15838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 29728538 - 29728386
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    ||||||| |||| |||||||| ||||||||||||||| |||||||||||   ||| ||||| |||||| ||||||||||||||||||||||||||| | |    
T  29728538 tcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtga 29728439  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  29728438 cacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctc 29728386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 488 - 623
Target Start/End: Original strand, 42230971 - 42231104
Alignment:
Q  488 ataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcg 587  Q
    ||||||||||||||||| | ||||| |||||||| ||| ||||  |||||| |||||||||||||||||| |||||||||||| | |||||||||||||     
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  588 gaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||||||||||||||||||||||||    
T  42231069 gaattttatttagcacactattgacggattcatctc 42231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 472 - 623
Target Start/End: Complemental strand, 2729347 - 2729196
Alignment:
Q  472 cgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcac 571  Q
    ||||||||||| ||||||||||||| ||||||| | |||| ||||||| | ||| ||||||||| || ||||||  ||| |||||| |||||| |||||     
T  2729347 cgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataaaaagaaattttttggcaatttgaaaactctcat 2729248  T
Q  572 acgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  2729247 acgcaaataggtctcaaaattttatttagcacactattgatggattcatctc 2729196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 39914530 - 39914681
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||||   ||| ||||| ||| || || ||||||||||||||| |||||||| |||    
T  39914530 tcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaa-aaaaatttgggcaatttgaaaattgtca 39914628  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    || | |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  39914629 caagtaaataggtcttggaattttatttggcacactattgacagtttcatctc 39914681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 472 - 582
Target Start/End: Original strand, 3435285 - 3435397
Alignment:
Q  472 cgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggc--aatctgaaaattctc 569  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||  | ||| |||||||||||| |||||||||||||||  |||||||||||||||    
T  3435285 cgcccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctc 3435384  T
Q  570 acacgcaaatagg 582  Q
    | |||||||||||    
T  3435385 aaacgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 549
Target Start/End: Complemental strand, 40470637 - 40470567
Alignment:
Q  479 gctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatt 549  Q
    |||| ||||||||||||||||||||||||||||  |||||||| ||| ||||||||| || || |||||||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 589 - 623
Target Start/End: Complemental strand, 40470509 - 40470475
Alignment:
Q  589 aattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||| ||||||||    
T  40470509 aattttatttagcacactattgacgggttcatctc 40470475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 471 - 519
Target Start/End: Complemental strand, 10397192 - 10397144
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaag 519  Q
    |||||||||||||||||||||||| | ||||||||   |||||||||||    
T  10397192 tcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaag 10397144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 1e-58; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 471 - 622
Target Start/End: Original strand, 17445328 - 17445479
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||  ||| |||||||||| |||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  17445328 tcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctca 17445427  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatct 622  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  17445428 cacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 35907567 - 35907719
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| |||||   |||||||||| ||||||| |||||| ||||||||||||||||    
T  35907567 tcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttacaaaaagaaaattttgggtaatctgaaaattctca 35907666  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  35907667 cacgcaaataggtctcggaattttatttagcacattattgacgagttcatctc 35907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 3828999 - 3829150
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||| |||| || ||||||||||||||||||||| |||||||||||||||  ||| |||||||||||| ||||||||||||||||||||||||||| |||    
T  3828999 tcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaaaaagaaaaatttgggcaatctgaaaattttca 3829098  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
     |||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  3829099 tacgcaaataggtct-ggaattttatttagcacactattgacgggttcatctc 3829150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 475 - 623
Target Start/End: Complemental strand, 321525 - 321377
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||||||| ||||||||||||||  ||||||| |||||||||||||| ||| ||||| |||||| ||||||||||||||||||||||||||||||| | |    
T  321525 ccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaaaaagaaaaatttgggcaatctgaaaattctcatatg 321426  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  321425 caaataggtctcggaattttatttaacacattattgacgggttcatctc 321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 469 - 623
Target Start/End: Complemental strand, 42311095 - 42310941
Alignment:
Q  469 gatcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattct 568  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| |  || ||||| |||||| ||||||||||||||||||||||||||| |    
T  42311095 gatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaaaaagaaaaatttgggcaatctgaaaattgt 42310996  T
Q  569 cacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||| |||| | |||||||||||| || |||||||||| ||||||||    
T  42310995 cacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctc 42310941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 32982208 - 32982056
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||| ||||| | |||||||||||||||||||||||||||||| ||||| | ||| ||| | |||||| ||||||||||||| ||||||||||||| |||    
T  32982208 tcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttggacaatctgaaaattgtca 32982109  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    ||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  32982108 cacacaaataggtcttggaattttatttagcactctattgacagattcatctc 32982056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 471 - 620
Target Start/End: Original strand, 7433460 - 7433609
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    ||||||| |||| ||| |||||||||||||||||||| ||||||||||| | ||| ||||| |||||| ||||||| |||||||||||| |||||| |||    
T  7433460 tcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctaaaaattgtca 7433559  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcat 620  Q
    ||| ||||||||||| | |||||||||||||||||||||||||| |||||    
T  7433560 cacacaaataggtcttgaaattttatttagcacactattgacgggttcat 7433609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 26144270 - 26144422
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||||   ||| ||||| ||| || |||||||||||||||||| |||||||| |||    
T  26144270 tcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaattgtca 26144369  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  26144370 cacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26144422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 478 - 582
Target Start/End: Complemental strand, 41972420 - 41972314
Alignment:
Q  478 ggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgg--gcaatctgaaaattctcacacgc 575  Q
    ||||| ||||||||||||||||||||||| |||||| ||||| | ||| |||||||||||| |||||||||||||    |||||||||||||||||||||    
T  41972420 ggctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaaaaagaaaaatttggaaaaaatctgaaaattctcacacgc 41972321  T
Q  576 aaatagg 582  Q
    |||||||    
T  41972320 aaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 485 - 582
Target Start/End: Original strand, 33489716 - 33489815
Alignment:
Q  485 tcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 582  Q
    ||||||||||||| ||||||||| ||| | ||||| | ||| |||||||||| | |||||||||||| ||  ||||||||||||||||||||||||||||    
T  33489716 tcgataatttttgtacattagactcaaactaaaagcccattaacacacttactaaaagaaaaatttgagcaaaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 23313255 - 23313345
Alignment:
Q  473 gcccgggctcaatcgataattt-ttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaa 562  Q
    |||||||||| || ||| |||| ||||||||||||| ||||  ||||||  ||| ||||| |||||| |||||||||||||||||||||||    
T  23313255 gcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatttacaaaaagaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 589 - 623
Target Start/End: Original strand, 33489839 - 33489873
Alignment:
Q  589 aattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||| ||||||||    
T  33489839 aattttatttagcacactattgacgggttcatctc 33489873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 589 - 623
Target Start/End: Complemental strand, 41972290 - 41972256
Alignment:
Q  589 aattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||| ||||||||    
T  41972290 aattttatttagcacactattgacgggttcatctc 41972256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 48901253 - 48901209
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaag 519  Q
    ||||| || ||||||||||| |||||||||| |||||||||||||    
T  48901253 ccggggtcgatcgataatttatgcacattaggcccaacccaaaag 48901209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 113; Significance: 7e-57; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 5245 - 5397
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| ||| |||||||||||||||||||||||| | ||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  5245 tcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctca 5344  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    || ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5345 catgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 5397  T

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Target: scaffold0041 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 475 - 623
Target Start/End: Original strand, 52944 - 53092
Alignment:
Q  475 ccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctcacacg 574  Q
    |||||||| |||||||||||||||||||||||   |||||||||| ||||| ||||| |||||| ||||||||||||| ||||||||||||||||||| |    
T  52944 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 53043  T
Q  575 caaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  53044 caaataggtctcggaattttatttagcacactattgacgggttcatctc 53092  T

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Target: scaffold0154 (Bit Score: 101; Significance: 1e-49; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 31495 - 31647
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||| | ||| |||||||||||| ||||||||||||| |||||||||||||||||    
T  31495 tcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaaaaagaaaaatttggacaatctgaaaattctca 31594  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    | ||||||||||||| | |||||||||| ||||||||||||| | ||||||||    
T  31595 ctcgcaaataggtctagtaattttattttgcacactattgacaggttcatctc 31647  T

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Target: scaffold0069 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 469 - 623
Target Start/End: Original strand, 17855 - 18009
Alignment:
Q  469 gatcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattct 568  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||| |    
T  17855 gatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgt 17954  T
Q  569 cacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| | |||||||||| | |||||||||||||||||||||||| | ||||||||    
T  17955 cacatgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 18009  T

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Target: scaffold2142 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 471 - 623
Target Start/End: Original strand, 537 - 689
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||||   ||| ||||| ||| || |||||||||||||||||| |||||||| |||    
T  537 tcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaattgtca 636  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  637 cacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 471 - 623
Target Start/End: Complemental strand, 480609 - 480457
Alignment:
Q  471 tcgcccgggctcaatcgataatttttgcacattagacccaacccaaaagtcaatttacacacttacaagaagaaaaatttgggcaatctgaaaattctca 570  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||||   ||| ||||| ||| || |||||||||||||||||| |||||||| |||    
T  480609 tcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaattgtca 480510  T
Q  571 cacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 623  Q
    |||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  480509 cacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 480457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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