View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19927_high_85 (Length: 291)
Name: NF19927_high_85
Description: NF19927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19927_high_85 |
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Alignment Details
Target: chr3 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 17 - 270
Target Start/End: Original strand, 34859512 - 34859765
Alignment:
| Q |
17 |
cacagacagaagaaaggtgtatgtcaacatcaggactcatgtacccgaaaagctacttcaaattaacagtgaaactagaacagtacaggcaactaatgat |
116 |
Q |
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| T |
34859512 |
cacagacagaagaaaggtgtatgtcaacatcaggactcatgtacccgaaaagctagttcaaattaacagtgaaactagaacagtacaggcaactaatgat |
34859611 |
T |
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| Q |
117 |
cataacaagctaaaggtgtatctgtacttctcagctccagttctaaattcatctacagaaatcatgaattctctcaaagttagccagggttcactccttc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34859612 |
cataacaagctaaaggtgtatctgtacttctcagctccagttctaaattcatctacagaaatcatgaattctctcaaagttagccagggttcactccttc |
34859711 |
T |
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| Q |
217 |
caactagtgcagaaaatcttggaaatcgtagatttgggttcatggttagttaat |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34859712 |
caactagtgcagaaaatcttggaaatcgtagatttgggttcatggttagttaat |
34859765 |
T |
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