View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19927_low_129 (Length: 237)
Name: NF19927_low_129
Description: NF19927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19927_low_129 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 16 - 218
Target Start/End: Complemental strand, 39026679 - 39026477
Alignment:
| Q |
16 |
aatattgatgatcctatgaggcttatagtagatatagactttaagtcccaatttgaacttgcaaggccaacacaatactacaaagaattaatagactcat |
115 |
Q |
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| T |
39026679 |
aatattgatgatcctatgaggcttatagtagatatagactttaagtcccaatttgaacttgcaaggccaacacaatactacaaagaattaatagactcat |
39026580 |
T |
|
| Q |
116 |
taccattaatctttattgggagagagaacaaattatgcaagataatttctttgctatgttcagctgccaaacagtccctaagagaaaagggtttacatgt |
215 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39026579 |
taccattaatctttgttgggagagagaacaaattatgcaagataatttctttgctatgttcagctgccaaacagtccctaagagaaaagggtttacatgt |
39026480 |
T |
|
| Q |
216 |
acc |
218 |
Q |
| |
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||| |
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| T |
39026479 |
acc |
39026477 |
T |
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