View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19927_low_39 (Length: 425)
Name: NF19927_low_39
Description: NF19927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19927_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 1 - 419
Target Start/End: Original strand, 33200416 - 33200835
Alignment:
| Q |
1 |
gaagatcaaaaactaattttggcttcatcttatctcggtaaatcattgcccc-ctctaatttttatctgatataacatcaattagggacagtacaggtta |
99 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33200416 |
gaagatcaaaaactaattttggctttatcttatctcggtaaatcattgcccccctctaatttttatctgatataacatcaattagggacagtacaggtta |
33200515 |
T |
|
| Q |
100 |
cattctagcatgtatccgtatatagctaatatcataaactaattttggcttcatcatttctaagtaaatcatcgcccacccacttaacaccctctcgcac |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
33200516 |
cattctagcatgtatccgtatatagctaatatcataaactaattttggcttcatcatttctaagtaaatcatcgcccacccacttaacaccctctcacac |
33200615 |
T |
|
| Q |
200 |
tcgaaattagacatttgcaacatggtctaatgcnnnnnnnnngttacaggtctaatgcaagttgaacaacaaggatctcaacaaccataacactaagaat |
299 |
Q |
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|| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33200616 |
tcaaaattagacatctgcaacatggtctaatgctttttttttgttacaggtctaatgcaagttgaacaacaaggatctcaacaaccataacactaagaat |
33200715 |
T |
|
| Q |
300 |
cctttaaataaacaaacaaacaagtataaccatagcagattacatcaagacaaaaggtcatattcattttttcaataaaacggtctcacaagcaatcatt |
399 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33200716 |
cctttaaataaacaaacaaacaagtataaccatagcagattacatcaagacaaaaggtcatattcattttttcaataaaacggtctcacaagcaatcatt |
33200815 |
T |
|
| Q |
400 |
aatttaggtaataatagaag |
419 |
Q |
| |
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|||||||||||||||||||| |
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| T |
33200816 |
aatttaggtaataatagaag |
33200835 |
T |
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