View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19927_low_68 (Length: 342)
Name: NF19927_low_68
Description: NF19927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19927_low_68 |
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Alignment Details
Target: chr8 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 56 - 335
Target Start/End: Original strand, 41568110 - 41568389
Alignment:
| Q |
56 |
cacgttagttggatgttttgttgatgaaaattgaaaacatacaagtactcctccattgttagaggtaagaagaaaaccgattattatctaaatttaaatt |
155 |
Q |
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| T |
41568110 |
cacgttagttgtaggttttcttgatgaaaattgaaaacatacaagtactcctccattgttagaggtaagaagaaaaccgattattatctaaatctaaatt |
41568209 |
T |
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| Q |
156 |
aaaagatggaatgaatgaaatctaagaatttgaaaaaggatcgattatggagctgttcgttcaaaaaaggatctgattttggtggattctgctgtacatt |
255 |
Q |
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| T |
41568210 |
aaaagatggaatgaatgaaatctaagaatttgaaaaaggatcgattatggagctgttcgttcaaaaaaggatctgattttggtggattctgatgtacatt |
41568309 |
T |
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| Q |
256 |
tgatgatgaactatgaaacatatcctaaaaaacaaaatatagttaatcacaaagaattttgggaatctccacatcctatg |
335 |
Q |
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| T |
41568310 |
tgatgatgaactatgaaacatatcctaaaaaacaaaatatagttaatcacaaagaattttgggaatctccacatcctatg |
41568389 |
T |
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