View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19927_low_90 (Length: 302)
Name: NF19927_low_90
Description: NF19927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19927_low_90 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 5715736 - 5715976
Alignment:
| Q |
19 |
aataatggactcaatgattgaaaagtcttcaatggtttttgtcaataatgagaataatggttgagaagcttgtaatggtgtttggctgaaataggtgtgg |
118 |
Q |
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| T |
5715736 |
aataatggactcaatgattgaaaagtcttcaatggtttttgtcaataatgagaataatgattgagaagcttgtaattgtgtttggctgaaataggtgtgg |
5715835 |
T |
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| Q |
119 |
gcacagattcatgataaactatttttagaaaataatatctttccacaaaatctcaagagggtttaaatatctctttcaaattcnnnnnnncattaaatta |
218 |
Q |
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| T |
5715836 |
gcacagattcatgataaactatttttagaaaataatatctttccacaaaatctcaagagggtttaaatatctctttcaaattcaaaaaatcgttaaatta |
5715935 |
T |
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| Q |
219 |
ttgaaaatttgaataattgttacacttgttgagaaccactt |
259 |
Q |
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| T |
5715936 |
ttgaaaatttgaataattgttacacttgttgagaaccactt |
5715976 |
T |
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