View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19927_low_97 (Length: 289)
Name: NF19927_low_97
Description: NF19927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19927_low_97 |
 | |
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| [»] chr6 (14 HSPs) |
| |
|
| [»] scaffold0024 (2 HSPs) |
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|
| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 245; Significance: 1e-136; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 2974612 - 2974324
Alignment:
| Q |
1 |
aggagtattgcaataatcacgccttagagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2974612 |
aggagtattgcaataatcacgccttagagcagccttcaacctatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaa |
2974513 |
T |
|
| Q |
101 |
ctgatattacaatttgtaatattttttccaagaccattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaa |
200 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||| |||||||||||| ||||||||| |||||||||| |
|
|
| T |
2974512 |
ctgatattagaatttgtaatattttctccaagaccattaaataagatagcaacagaatcactgtctccaagccaattttgcagtatattgctccgaacaa |
2974413 |
T |
|
| Q |
201 |
gtatatccacatccgtactagtatttataaggtagtccaaaataaaatgataatcaataatatatgactcataagggtaatgacactgc |
289 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2974412 |
gtatatccacatccgtactagtatttataaggtaatccaaaataaaatgataatcaataatatatgactgataagggtaatgacactgc |
2974324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 2927765 - 2927477
Alignment:
| Q |
1 |
aggagtattgcaataatcacgccttagagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaa |
100 |
Q |
| |
|
|||||| ||||||||||||||||| |||| ||||||||||||||| | |||||| ||||||||||||| || |||||||||||||||||||| |||||| |
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|
| T |
2927765 |
aggagttttgcaataatcacgcctgagagtagccttcaacttatgtcgtggattcttacaataagcatttaagtctttgcaaagaatagagaattgagaa |
2927666 |
T |
|
| Q |
101 |
ctgatattacaatttgtaatattttttccaagaccattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaa |
200 |
Q |
| |
|
||||| || || ||||| |||||| |||||||||||||||||| ||||||||||||||| ||| ||||| ||||| |||||| | ||| |||||| |
|
|
| T |
2927665 |
ctgattgtagaacgtgtaacatttttaccaagaccattaaacaagttagccacagaatcaccgtctccaagcatattttccagtatttccctctgaacaa |
2927566 |
T |
|
| Q |
201 |
gtatatccacatccgtactagtatttataaggtagtccaaaataaaatgataatcaataatatatgactcataagggtaatgacactgc |
289 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||| ||||||| | || |||||||| |||||||||| |||| |||||||||||||||| |
|
|
| T |
2927565 |
gtatatccacatccttaccagtatttataaggtaatccaaaacagaacgataatcagtaatatatgaatcatcagggtaatgacactgc |
2927477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 2 - 289
Target Start/End: Original strand, 3003258 - 3003545
Alignment:
| Q |
2 |
ggagtattgcaataatcacgccttagagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaac |
101 |
Q |
| |
|
||||| ||||||||||||||||| |||| |||||||||||||||||| |||||| ||||||||||||| || ||||||| |||||||||||| ||||||| |
|
|
| T |
3003258 |
ggagttttgcaataatcacgcctgagagtagccttcaacttatgccatggattcttacaataagcatttaagtctttgccaagaatagagaattgagaac |
3003357 |
T |
|
| Q |
102 |
tgatattacaatttgtaatattttttccaagaccattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaag |
201 |
Q |
| |
|
|||| || || | |||||| ||| |||||||||||||||||| |||||||||||||||| ||| ||||| ||||| |||||| | ||| ||||||| |
|
|
| T |
3003358 |
tgattgtagaacgtataatatctttgccaagaccattaaacaagttagccacagaatcactgtctccaagcatattttccagtatttcgctctgaacaag |
3003457 |
T |
|
| Q |
202 |
tatatccacatccgtactagtatttataaggtagtccaaaataaaatgataatcaataatatatgactcataagggtaatgacactgc |
289 |
Q |
| |
|
||||||||||||| || ||||||||||||||| ||||||| | || ||||||| |||||||||| |||| |||||||||||||||| |
|
|
| T |
3003458 |
tatatccacatccttagcagtatttataaggtaatccaaaacagaacgataatcggtaatatatgaatcatcagggtaatgacactgc |
3003545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 2935204 - 2934916
Alignment:
| Q |
1 |
aggagtattgcaataatcacgccttagagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaa |
100 |
Q |
| |
|
|||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||| || |||||||| |||||||||||||||||| |
|
|
| T |
2935204 |
aggagttttgcaataatcacgcctgagagtagccttcaacttatgccaaggattcttacaaaaagcatttaagtctttgcatagaatagagaaatgagaa |
2935105 |
T |
|
| Q |
101 |
ctgatattacaatttgtaatattttttccaagaccattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaa |
200 |
Q |
| |
|
||||||||| | | ||||| |||||| | |||||||||||||||| ||||||||||||||||||| ||||| ||| | |||||| | ||||||||| |
|
|
| T |
2935104 |
ctgatattagattgtgtaacatttttccaaagaccattaaacaagttagccacagaatcactatccgcaagcatattatgcagtatttcgttccgaacaa |
2935005 |
T |
|
| Q |
201 |
gtatatccacatccgtactagtatttataaggtagtccaaaataaaatgataatcaataatatatgactcataagggtaatgacactgc |
289 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||| |||| | | | ||||||| | |||||||| |||| |||||||||||||||| |
|
|
| T |
2935004 |
gtatatcagcatccgtaccagtatttataaggtaatccatgacagcaacataatcagtgatatatgaatcatcagggtaatgacactgc |
2934916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 2938065 - 2937777
Alignment:
| Q |
1 |
aggagtattgcaataatcacgccttagagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaa |
100 |
Q |
| |
|
|||||| |||| |||||||||||| |||| |||||||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
2938065 |
aggagttttgccataatcacgcctcagagtagccttcaacttatgccaaggattactgcagaaagcatttaattctttgcaaagaatagagaattgagaa |
2937966 |
T |
|
| Q |
101 |
ctgatattacaatttgtaatattttttccaagaccattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaa |
200 |
Q |
| |
|
||||||| | ||| | || |||||| | ||||||||||||||| |||||||||||||||| ||| |||||||||||| |||||| || ||| ||||| |
|
|
| T |
2937965 |
ctgatatcagaatatacaacatttttgcaaagaccattaaacaaattagccacagaatcactgtctccaagccaattttccagtattttgttccaaacaa |
2937866 |
T |
|
| Q |
201 |
gtatatccacatccgtactagtatttataaggtagtccaaaataaaatgataatcaataatatatgactcataagggtaatgacactgc |
289 |
Q |
| |
|
||||| || ||||| ||| |||||||||||||| ||||||| || | ||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
2937865 |
gtatacccgcatccttaccggtatttataaggtaatccaaaacaacaacataatcagcaatatatgactcatgagggtaatgacactgc |
2937777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 2996846 - 2997110
Alignment:
| Q |
1 |
aggagtattgcaataatcacgccttagagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaa |
100 |
Q |
| |
|
|||||| |||| |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||| |||||| |
|
|
| T |
2996846 |
aggagtcttgccataatcacgcctgagagtagccttcaacttatgccaaggattcctacaaaaagcatttaagtccttgcaaagaatagagaattgagaa |
2996945 |
T |
|
| Q |
101 |
ctgatattacaatttgtaatattttttccaagaccattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaa |
200 |
Q |
| |
|
|||||||| || | || |||| | | |||||||||||||||| |||||||||||||||| ||| |||||||||||| |||||| | | |||||| |
|
|
| T |
2996946 |
ctgatattggtatgtacaacatttatgcaaagaccattaaacaagttagccacagaatcactgtctccaagccaattttccagtatttctttgtgaacaa |
2997045 |
T |
|
| Q |
201 |
gtatatccacatccgtactagtatttataaggtagtccaaaataaaatgataatcaataatatat |
265 |
Q |
| |
|
||||||| |||||| ||| ||| ||||||||||| ||||||| | || ||||||| |||||||| |
|
|
| T |
2997046 |
gtatatcaacatccttaccagtgtttataaggtaatccaaaacagaaacataatcagtaatatat |
2997110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 38 - 285
Target Start/End: Original strand, 2658495 - 2658742
Alignment:
| Q |
38 |
aacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaactgatattacaatttgtaatattttttccaagaccat |
137 |
Q |
| |
|
|||||| ||||||||||||||||| || | || || |||| |||||||||| |||||||| |||| ||||||||| |||| |||||| | ||||||| |
|
|
| T |
2658495 |
aacttaggccaaggattcctacaaaaatcttttaagtcttcacaaagaatagtgaaatgaggactgctattacaatgagtaacatttttgcaaagaccag |
2658594 |
T |
|
| Q |
138 |
taaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaagtatatccacatccgtactagtatttataaggtagtc |
237 |
Q |
| |
|
|||||||| |||||||||||||||| ||| |||||||||||| |||||| || | |||||||||||||||||||| ||| ||||||||||||||| || |
|
|
| T |
2658595 |
taaacaagttagccacagaatcactgtctccaagccaattttccagtattttgtttggaacaagtatatccacatccttaccagtatttataaggtaatc |
2658694 |
T |
|
| Q |
238 |
caaaataaaatgataatcaataatatatgactcataagggtaatgaca |
285 |
Q |
| |
|
||||| | | ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
2658695 |
caaaacagcaacataatcagtaatatatgactcataagggtaatgaca |
2658742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 45 - 289
Target Start/End: Complemental strand, 2965070 - 2964826
Alignment:
| Q |
45 |
gccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaactgatattacaatttgtaatattttttccaagaccattaaacaa |
144 |
Q |
| |
|
|||||||||||| |||| |||||||||| |||||||||||||||||||| ||| |||||||||| ||| | ||| || ||| ||||||||||||||| |
|
|
| T |
2965070 |
gccaaggattcccacaaaaagcattcaaatctttgcaaagaatagagaattgaagactgatattagaatgtataacatatttggaaagaccattaaacaa |
2964971 |
T |
|
| Q |
145 |
gatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaagtatatccacatccgtactagtatttataaggtagtccaaaata |
244 |
Q |
| |
|
| |||||||||||||||||||| ||||| ||||| |||||| || || |||||||||||||||||||| | | ||||||||||||||| ||||||| | |
|
|
| T |
2964970 |
gttagccacagaatcactatctccaagcatattttccagtattttgttctgaacaagtatatccacatccttgccagtatttataaggtaatccaaaaca |
2964871 |
T |
|
| Q |
245 |
aaatgataatcaataatatatgactcataagggtaatgacactgc |
289 |
Q |
| |
|
| ||| ||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
2964870 |
gcaacatagtcagtaatatatgactcataagggtaacgacactgc |
2964826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 2952541 - 2952250
Alignment:
| Q |
1 |
aggagtattgcaataatcacgccttagagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaa |
100 |
Q |
| |
|
|||||| |||| |||||||||||| |||| || |||||||||| ||||||||| |||||| | ||||| | |||||||| || ||||||||| |||||| |
|
|
| T |
2952541 |
aggagttttgccataatcacgcctcagagtggctttcaacttattccaaggattactacaaaatgcatttatttctttgccaataatagagaattgagaa |
2952442 |
T |
|
| Q |
101 |
ctgatattacaatttgtaatattttttccaagaccattaaacaagatagccacagaatcacta---tcttcaagccaatttttcagtatattactccgaa |
197 |
Q |
| |
|
||||||||| ||| | || |||||| | || |||||||||| | ||||||||||||||||| ||| ||||| ||| | ||||||| ||||||| |
|
|
| T |
2952441 |
ctgatattagaatatacaacatttttgcaaataccattaaacctgttagccacagaatcactactttctccaagcatattatctagtatatccctccgaa |
2952342 |
T |
|
| Q |
198 |
caagtatatccacatccgtactagtatttataaggtagtccaaaataaaatgataatcaataatatatgactcataagggtaatgacactgc |
289 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||| ||| ||||||| || | ||||||| |||||||||||| | |||||||||||||||| |
|
|
| T |
2952341 |
caagtatatccacatcggtaccagtatttataatgtaatccaaaacaacaacataatcagcaatatatgactcctcagggtaatgacactgc |
2952250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 2929914 - 2929626
Alignment:
| Q |
1 |
aggagtattgcaataatcacgccttagagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaa |
100 |
Q |
| |
|
||||||| | |||||||||||||| |||| |||||||||| |||||||||||||| |||| ||||||| || |||||||| |||||||||||||||| | |
|
|
| T |
2929914 |
aggagtacttcaataatcacgcctgagagtagccttcaacctatgccaaggattctaacaaaaagcatttaagtctttgcatagaatagagaaatgagga |
2929815 |
T |
|
| Q |
101 |
ctgatattacaatttgtaatattttttccaagaccattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaa |
200 |
Q |
| |
|
||||||||| ||| | |||||| ||| | || ||||||||||| | |||||||||||| | | ||| ||| |||||||| |||||| | || ||| || |
|
|
| T |
2929814 |
ctgatattagaatgtataatatatttgcaaaaaccattaaacatgttagccacagaatgattgtctccaaaccaattttccagtatttctttctgaataa |
2929715 |
T |
|
| Q |
201 |
gtatatccacatccgtactagtatttataaggtagtccaaaataaaatgataatcaataatatatgactcataagggtaatgacactgc |
289 |
Q |
| |
|
||||||| | ||| ||| |||||||||||| | |||| |||| | |||||||| |||||||||||||| |||||||||| ||||| |
|
|
| T |
2929714 |
gtatatcggcgtccttaccagtatttataagaaaatccataatagtaacataatcaagaatatatgactcatgagggtaatgaaactgc |
2929626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 35 - 289
Target Start/End: Complemental strand, 2979450 - 2979208
Alignment:
| Q |
35 |
ttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaactgatattacaatttgtaatattttttccaagac |
134 |
Q |
| |
|
||||||| |||||||||||| ||| || || |||| || |||||||||||||||||||||||||||||||||||| | ||||| | |||| |
|
|
| T |
2979450 |
ttcaactcatgccaaggattactataaaaatcatttaaatctttgcaaagaatagagaaatgagaactgatatta---------acattttcgcaaagat |
2979360 |
T |
|
| Q |
135 |
cattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaagtatatccacatccgtactagtatttataaggta |
234 |
Q |
| |
|
|||||||||| |||| |||||| ||| ||| ||||| |||||| |||||| || |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2979359 |
cattaaacaatttagcagcagaatgactgtctccaagcaaattttccagtattttgctccgaacaagtatatccacatccgtaccggtatttataaggta |
2979260 |
T |
|
| Q |
235 |
gtccaaaataaaatgataatcaataatatatgactcataagggtaatgacactgc |
289 |
Q |
| |
|
|| || | || ||||||| ||||||||||||||| |||||||| ||||||| |
|
|
| T |
2979259 |
atcgaagacaa---cataatcagtaatatatgactcatgagggtaataacactgc |
2979208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 2983471 - 2983187
Alignment:
| Q |
1 |
aggagtattgcaataatcacgccttagagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaa |
100 |
Q |
| |
|
||||||||||| |||||||||||| |||| ||||||||||||| || |||||| ||||| |||||| |||||| ||| ||||| | ||||||| || |
|
|
| T |
2983471 |
aggagtattgccataatcacgcctgagagtggccttcaacttattcctaggattattacaaaaagcatccaattcattggaaagacttacgaaatgataa |
2983372 |
T |
|
| Q |
101 |
ctgatattacaatttgtaatattttttccaagaccattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaa |
200 |
Q |
| |
|
|||| ||| | ||| || |||||| | ||||||||||||||||||||||| ||| | || ||| ||||| | |||| ||||| | || ||| || |
|
|
| T |
2983371 |
ctgagtttagattttacaacatttttgcaaagaccattaaacaagatagccatagattgaccgtctccaagcaagttttctagtatttgcttctgaataa |
2983272 |
T |
|
| Q |
201 |
gtatatccacatccgtactagtatttataaggtagtccaaaataaaatgataatcaataatatatgactcataagggtaatgaca |
285 |
Q |
| |
|
||| |||||||||| ||| | ||||||||||||| ||||||| || | |||||||| |||||||||||||| |||||||||||| |
|
|
| T |
2983271 |
gtacatccacatccttaccattatttataaggtaatccaaaacaagaacataatcaagaatatatgactcatgagggtaatgaca |
2983187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 2954721 - 2954662
Alignment:
| Q |
26 |
agagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaaga |
85 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
2954721 |
agagtagccttcaacttacgccaaggattcctacaaaaagcatttaattctttgcaaaga |
2954662 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 2985739 - 2985693
Alignment:
| Q |
195 |
gaacaagtatatccacatccgtactagtatttataaggtagtccaaa |
241 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||| |||||| |
|
|
| T |
2985739 |
gaacaagtatatccgcatccttactagtatttataaggtaatccaaa |
2985693 |
T |
|
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Target: scaffold0024 (Bit Score: 129; Significance: 8e-67; HSPs: 2)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 34715 - 35003
Alignment:
| Q |
1 |
aggagtattgcaataatcacgccttagagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaa |
100 |
Q |
| |
|
|||||| |||| |||||||||||| |||| |||||||||| ||| ||||||||| |||||| | ||||| || | ||||||||||||||||||||||||| |
|
|
| T |
34715 |
aggagttttgccataatcacgcctgagagaagccttcaacctattccaaggattactacaaaatgcatttaagtttttgcaaagaatagagaaatgagaa |
34814 |
T |
|
| Q |
101 |
ctgatattacaatttgtaatattttttccaagaccattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaa |
200 |
Q |
| |
|
||||||||| || | ||| |||||| | ||||| |||||||||| |||||||||||||||| ||| ||||| |||| ||||||| | ||||||||| |
|
|
| T |
34815 |
ctgatattatgatgtataacatttttgcaaagacgattaaacaagttagccacagaatcactgtctccaagcaaattagtcagtatttctttccgaacaa |
34914 |
T |
|
| Q |
201 |
gtatatccacatccgtactagtatttataaggtagtccaaaataaaatgataatcaataatatatgactcataagggtaatgacactgc |
289 |
Q |
| |
|
|||||||| ||||| ||| ||||||||||||| | ||||||| || | ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
34915 |
gtatatccgcatccttaccagtatttataaggaaatccaaaacaacaacataatcagtaatatatgactcataagggtaatgacactgc |
35003 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 283
Target Start/End: Original strand, 44533 - 44686
Alignment:
| Q |
130 |
aagaccattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaagtatatccacatccgtactagtatttata |
229 |
Q |
| |
|
|||| |||||||||| |||||||| ||| ||| ||| ||||| |||||| |||||| || ||||||||| ||||||| ||||| ||| |||||||||| |
|
|
| T |
44533 |
aagatcattaaacaaattagccacataatgactgtctccaagcaaattttccagtattttgctccgaacatgtatatctgcatccttaccagtatttata |
44632 |
T |
|
| Q |
230 |
aggtagtccaaaataaaatgataatcaataatatatgactcataagggtaatga |
283 |
Q |
| |
|
||||| ||||||||| | ||||| |||||||||||| |||| |||||||||| |
|
|
| T |
44633 |
aggtaatccaaaatagcaacataattaataatatatgattcattagggtaatga |
44686 |
T |
|
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Target: chr7 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 3339630 - 3339342
Alignment:
| Q |
1 |
aggagtattgcaataatcacgccttagagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaa |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||| |||||||||||||| ||||| || |||| || ||||||| |||| ||| |||||||||| |
|
|
| T |
3339630 |
aggagtattgcaataatcacgcctgagagtggccttcaacctatgccaaggattcttacaaaaatcatttaagtctttgccaagagtagggaaatgagaa |
3339531 |
T |
|
| Q |
101 |
ctgatattacaatttgtaatattttttccaagaccattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaa |
200 |
Q |
| |
|
|| | | || ||| ||| |||||| | ||||||||||||||| |||||||||||||||| ||| |||||||||||| ||||| | ||| ||||| |
|
|
| T |
3339530 |
cttacactagaatgcataacatttttgcaaagaccattaaacaatttagccacagaatcactgtctgcaagccaattttctagtatttcgctcttaacaa |
3339431 |
T |
|
| Q |
201 |
gtatatccacatccgtactagtatttataaggtagtccaaaataaaatgataatcaataatatatgactcataagggtaatgacactgc |
289 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| | ||||||| | | ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
3339430 |
gtatatccacatccatactagtatttataaggaaatccaaaaaagcaacataatcaataatatatgactcatcagggtaatgacactgc |
3339342 |
T |
|
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Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 49614034 - 49613800
Alignment:
| Q |
8 |
ttgcaataatcacgccttagagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaactgatat |
107 |
Q |
| |
|
|||||||||||||| || |||| |||||||| |||||||||||| |||| || ||||||| |||| || ||||||||| | |||||||||| || |
|
|
| T |
49614034 |
ttgcaataatcacgtctgagagtcgccttcaatctatgccaaggatcatgacaaaaaccattcaagtcttcacatagaatagagtactgagaactgaaat |
49613935 |
T |
|
| Q |
108 |
tacaatttgtaatattttttccaagaccattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaagtatatc |
207 |
Q |
| |
|
||| ||||| |||||| | ||||| |||||||||| ||||||||||||||||||| |||||||||| |||||| || || ||||||||||||| |
|
|
| T |
49613934 |
acaaatgtgtaacatttttccaaagactattaaacaagttagccacagaatcactatccccaagccaattcaccagtattttcttctgaacaagtatatc |
49613835 |
T |
|
| Q |
208 |
cacatccgtactagtatttataaggtagtccaaaa |
242 |
Q |
| |
|
||||||| | | |||||| |||||| | ||||||| |
|
|
| T |
49613834 |
cacatccttgccagtattaataaggaaatccaaaa |
49613800 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 49619016 - 49618735
Alignment:
| Q |
1 |
aggagtattgcaataatcacgccttagagcagccttcaacttatgccaaggattcctacaataagcattcaattctttgcaaagaatagagaaatgagaa |
100 |
Q |
| |
|
||||||| ||| |||||||||||| |||| |||||||| |||||||||||||| ||||| || || |||| ||||| ||||| | ||||||||||| |
|
|
| T |
49619016 |
aggagtactgccataatcacgcctgagagtagccttcagtttatgccaaggattattacaaaaacca-tcaagtctttaggaagaagacagaaatgagaa |
49618918 |
T |
|
| Q |
101 |
ctgatattacaatttgtaatattttttccaagaccattaaacaagatagccacagaatcactatcttcaagccaatttttcagtatattactccgaacaa |
200 |
Q |
| |
|
|||| ||| || || || |||||| | |||||||||| ||||| | |||||||||||||| ||| ||||| ||| | | |||| ||| |||||| |
|
|
| T |
49618917 |
ctgaaatttatatgtgaaacatttttccaaagaccattatacaagtttgccacagaatcactgtctgcaagcatattatcctgtattcctctctgaacaa |
49618818 |
T |
|
| Q |
201 |
gtatatccacatccgtactagtatttataaggtagtccaaaataaaatgataatcaataatatatgactcataagggtaatga |
283 |
Q |
| |
|
|||||||| ||||| ||| ||||||||||||| ||||||| | || ||||||| |||||| || |||| |||||||||| |
|
|
| T |
49618817 |
gtatatccgcatccctaccgatatttataaggtaatccaaaacagaaatataatcataaatataggaatcatgagggtaatga |
49618735 |
T |
|
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