View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19928_low_3 (Length: 569)

Name: NF19928_low_3
Description: NF19928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19928_low_3
NF19928_low_3
[»] chr3 (25 HSPs)
chr3 (11-447)||(26139477-26139905)
chr3 (10-279)||(26110697-26110966)
chr3 (162-390)||(26201740-26201969)
chr3 (10-279)||(26233043-26233312)
chr3 (10-279)||(26204979-26205249)
chr3 (10-279)||(26127697-26127960)
chr3 (10-279)||(26177747-26178010)
chr3 (128-316)||(26208759-26208947)
chr3 (128-316)||(26235500-26235688)
chr3 (11-227)||(26129045-26129263)
chr3 (11-227)||(26179101-26179319)
chr3 (300-399)||(26232945-26233045)
chr3 (300-390)||(26110608-26110699)
chr3 (300-390)||(26204890-26204981)
chr3 (14-96)||(26235691-26235773)
chr3 (10-95)||(26113370-26113455)
chr3 (14-96)||(26208950-26209032)
chr3 (300-369)||(26127634-26127699)
chr3 (300-369)||(26177684-26177749)
chr3 (500-550)||(26208670-26208721)
chr3 (500-550)||(26235411-26235462)
chr3 (498-557)||(26112942-26113002)
chr3 (498-553)||(26201623-26201681)
chr3 (353-390)||(26113253-26113290)
chr3 (501-557)||(26139413-26139470)


Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 11 - 447
Target Start/End: Complemental strand, 26139905 - 26139477
Alignment:
Q  11 catcatcaactcatttagatgtaatagattcatcatcaggccagttagttacttctgactgtaaaacatcttcacaggtgagtttatagtatgtaatcaa 110  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||||| |||||||| |||    
T  26139905 catcgtcaactcatttagatgtaataggttcatcatcaggccagttagttacttctgagcgtaaaatatcttcactggtgagtttatcgtatgtaaccaa 26139806  T
Q  111 cttttcaaacaagtagtgttgtcatgttttttattcattattttccatgctattggaatcctaagaataaagttttatactagtttttgtgtaatttttg 210  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||| || |||||| |||||||| | |||||||| | ||||||||||||||  ||||    
T  26139805 cttttcaaacaagtagtgttgtca-gtttttttttcattattctccaagcaattggattcctaagagtcaagttttaaattagtttttgtgtaa--tttg 26139709  T
Q  211 tgtttagtctactgcttctcaatcatgtatctaaagttaaggcaaattgttgctctgaaattattttgttttctactttttattaaatctgtagtcaaat 310  Q
    ||||||||||||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  26139708 tgtttagtctactacttttcaatcttatatctaaagttaaggcaaattgttgctctgaaattattttgttttcta--ttttattaaatctgtagtcaaat 26139611  T
Q  311 taagct-ttttatttgtgagttgtgagctcaacgacaagagtttgaccttctaactttaagggacaaggttcaaatccccttaggggcgtgtaacaatgt 409  Q
    |||| | |||| ||||||||||||||||||| || ||||| ||||||||| ||||||||||||||||||||||||| | || |||||||| | | |||||    
T  26139610 taagttcttttgtttgtgagttgtgagctcagcggcaagaatttgaccttgtaactttaagggacaaggttcaaattctctcaggggcgtttgaaaatgt 26139511  T
Q  410 gccattaattagcgtcactttatttgataataataatc 447  Q
    |    | ||||| |||||||||||| ||||||||||||    
T  26139510 g----tcattagtgtcactttatttaataataataatc 26139477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 10 - 279
Target Start/End: Complemental strand, 26110966 - 26110697
Alignment:
Q  10 acatcatcaactcatttagatgtaatagattcatcatcaggccagttagttacttctgactgtaaaacatcttcacaggtgagtttatagtatgtaatca 109  Q
    ||||| |||||||| |||||||||  || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||  |    
T  26110966 acatcgtcaactcagttagatgtagcaggttcatcatcaggccagttagttacttctgagtgtaaaacatcttcacaggtgagtttatcttatgtaacaa 26110867  T
Q  110 acttttcaaacaagtagtgttgtcatgttttttattcattattttccatgctattggaatcctaagaataaagttttatactagtttttgtgtaattttt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |   | | |||||||| ||||||||||||| |||||||    
T  26110866 acttttcaaacaagtagtgttgtcatgttttttattcattattttccatgcaattggattcattttattcaagttttaaactagtttttgtgcaattttt 26110767  T
Q  210 gtgtttagtctactgcttctcaatcatgtatctaaagttaaggcaaattgttgctctgaaattattttgt 279  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||| ||| |||| |||||||||||||    
T  26110766 gtgtttagtctactgcttttcagtcttgtatctaaagttaaggcaaactgtagctcagaaattattttgt 26110697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 162 - 390
Target Start/End: Complemental strand, 26201969 - 26201740
Alignment:
Q  162 attggaatcctaagaataaagttttatactagtttttgtgtaatttttgtgtttagtctactgcttctcaatcatgtatctaaagttaaggcaaattgtt 261  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| | |||| |||||||||||||||||||| |||||    
T  26201969 attggattcctaagaatcaagttttaaactagtttttgtgtaatttttgtgtttagtctactacttttaaatcttgtatctaaagttaaggcaagttgtt 26201870  T
Q  262 gctctgaaattattttgttttctactttttattaaatctgtagtcaaattaagct-ttttatttgtgagttgtgagctcaacgacaagagtttgaccttc 360  Q
    ||| ||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||  | ||||||||||||||||    
T  26201869 gctttgaaattattttgttttcttctttttataaaatatgtagtcaaattaagctcttttatttgtgagttgtgatctcagtggcaagagtttgaccttc 26201770  T
Q  361 taactttaagggacaaggttcaaatcccct 390  Q
    ||||||||||||||||||||||||||||||    
T  26201769 taactttaagggacaaggttcaaatcccct 26201740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 10 - 279
Target Start/End: Complemental strand, 26233312 - 26233043
Alignment:
Q  10 acatcatcaactcatttagatgtaatagattcatcatcaggccagttagttacttctgactgtaaaacatcttcacaggtgagtttatagtatgtaatca 109  Q
    ||||| |||||||| |||||||||  || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||  |    
T  26233312 acatcgtcaactcagttagatgtagcaggttcatcatcgggccagttagttacttctgactgtaaaacatcttcacaggtgagtttatcttatgtaacaa 26233213  T
Q  110 acttttcaaacaagtagtgttgtcatgttttttattcattattttccatgctattggaatcctaagaataaagttttatactagtttttgtgtaattttt 209  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| || |||||| || |   | | |||||||| ||||||||||||| |||||||    
T  26233212 acttttcaaacaagtagtgttatcatgttttttattcattattttccaagcaattggattcattttattcaagttttaaactagtttttgtgcaattttt 26233113  T
Q  210 gtgtttagtctactgcttctcaatcatgtatctaaagttaaggcaaattgttgctctgaaattattttgt 279  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||| ||| |||| |||||||||||||    
T  26233112 gtgtttagtctactgcttttcagtcttgtatctaaagttaaggcaaactgtagctcagaaattattttgt 26233043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 10 - 279
Target Start/End: Complemental strand, 26205249 - 26204979
Alignment:
Q  10 acatcatcaactcatttagatgtaatagattcatcatcaggccagttagttacttctgactgtaaaacatcttcacaggtgagtttatagtatgtaatca 109  Q
    ||||| |||||||| |||||||||  ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||  ||||||| ||    
T  26205249 acatcgtcaactcagttagatgtagcagattcatcatcaggccagttagttacttctgtgtgtaaaacatcttcacaggtgagtttatcttatgtaacca 26205150  T
Q  110 acttttcaaacaagtagtgttgtcatgttttttattcattattttccatgctattggaatcctaagaataaagttttatactagtttttgt-gtaatttt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |   | | |||||||| |||||||||| | | ||||||    
T  26205149 acttttcaaacaagtagtgttgtcatgttttttattcattattttccatgcgattggattcattttattcaagttttaaactagtttttttcgcaatttt 26205050  T
Q  209 tgtgtttagtctactgcttctcaatcatgtatctaaagttaaggcaaattgttgctctgaaattattttgt 279  Q
    ||||||||||||| ||||| ||| || ||||||||||||||||||||| ||| |||| ||||| |||||||    
T  26205049 tgtgtttagtctattgcttttcagtcttgtatctaaagttaaggcaaactgtagctcagaaatgattttgt 26204979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 10 - 279
Target Start/End: Complemental strand, 26127960 - 26127697
Alignment:
Q  10 acatcatcaactcatttagatgtaatagattcatcatcaggccagttagttacttctgactgtaaaacatcttcacaggtgagtttata---gtatgtaa 106  Q
    ||||| ||||||||||||||||||  || ||||||||||||||||||||         |||| |||||||||||||||||||||| |||   |||||||     
T  26127960 acatcgtcaactcatttagatgtagcaggttcatcatcaggccagttag---------actgcaaaacatcttcacaggtgagttcatactagtatgtag 26127870  T
Q  107 tcaacttttcaaacaagtagtgttgtcatgttttttattcattattttccatgctattggaatcctaagaataaagttttatactagtttttgtgtaatt 206  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||| |||| |||||||| |||||||||||||||| |    
T  26127869 ccaacttttcaaacaagtagtgttgtcatgttatttattcattattttccatgcgattggattcctacgaatcaagttttaaactagtttttgtgtaaat 26127770  T
Q  207 tttgtgtttagtctactgcttctcaatcatgtatctaaagttaaggcaaattgttgctctgaaattattttgt 279  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||||| || |||| ||||||||||||||||||    
T  26127769 tttgtgtttagtctactccttttcaatcttgtatctaaagttaagggaagttgtagctctgaaattattttgt 26127697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 10 - 279
Target Start/End: Complemental strand, 26178010 - 26177747
Alignment:
Q  10 acatcatcaactcatttagatgtaatagattcatcatcaggccagttagttacttctgactgtaaaacatcttcacaggtgagtttata---gtatgtaa 106  Q
    ||||| ||||||||||||||||||  || ||||||||||||||||||||         |||| |||||||||||||||||||||| |||   |||||||     
T  26178010 acatcgtcaactcatttagatgtagcaggttcatcatcaggccagttag---------actgcaaaacatcttcacaggtgagttcatactagtatgtag 26177920  T
Q  107 tcaacttttcaaacaagtagtgttgtcatgttttttattcattattttccatgctattggaatcctaagaataaagttttatactagtttttgtgtaatt 206  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||| |||| |||||||| |||||||||||||||| |    
T  26177919 ccaacttttcaaacaagtagtgttgtcatgttatttattcattattttccatgcgattggattcctacgaatcaagttttaaactagtttttgtgtaaat 26177820  T
Q  207 tttgtgtttagtctactgcttctcaatcatgtatctaaagttaaggcaaattgttgctctgaaattattttgt 279  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||||| || |||| ||||||||||||||||||    
T  26177819 tttgtgtttagtctactccttttcaatcttgtatctaaagttaagggaagttgtagctctgaaattattttgt 26177747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 128 - 316
Target Start/End: Complemental strand, 26208947 - 26208759
Alignment:
Q  128 gttgtcatgttttttattcattattttccatgctattggaatcctaagaataaagttttatactagtttttgtgtaatttttgtgtttagtctactgctt 227  Q
    |||||||||||||||||||||||||||||| ||  ||| | |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  26208947 gttgtcatgttttttattcattattttccacgcagttgcattcctaagaatcaagttttaaactagtttttgtgtaatttttgtgtttaatctactgctt 26208848  T
Q  228 ctcaatcatgtatctaaagttaaggcaaattgttgctctgaaattattttgttttctactttttattaaatctgtagtcaaattaagct 316  Q
     |||||| || |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26208847 ttcaatcttggatctaaagttaacgcaaagtgttgttctgaaattattttgttttctactttttattaaatctgttgtcaaattaagct 26208759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 128 - 316
Target Start/End: Complemental strand, 26235688 - 26235500
Alignment:
Q  128 gttgtcatgttttttattcattattttccatgctattggaatcctaagaataaagttttatactagtttttgtgtaatttttgtgtttagtctactgctt 227  Q
    ||||||||||||||||||||||||||||||  |  ||| | |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  26235688 gttgtcatgttttttattcattattttccacacagttgcattcctaagaatcaagttttaaactagtttttgtgtaatttttgtgtttaatctactgctt 26235589  T
Q  228 ctcaatcatgtatctaaagttaaggcaaattgttgctctgaaattattttgttttctactttttattaaatctgtagtcaaattaagct 316  Q
     |||||| || |||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26235588 ttcaatcttggatctaaagttaaggcaaactgttgttttgaaattattttgttttctactttttattaaatctgttgtcaaattaagct 26235500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 26129263 - 26129045
Alignment:
Q  11 catcatcaactcatttagatgtaatagattcatcatcaggccagttagttacttctgactgtaaaacatcttcacaggtgagtttatagtatgtaatcaa 110  Q
    |||| |||||||||   |||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||||| |||||||| |||    
T  26129263 catcgtcaactcatactgatgtaataggttcatcatcaggccagttagttacttctgagcgtaaaatatcttcactggtgagtttatcgtatgtaaccaa 26129164  T
Q  111 cttttcaaacaagtagtgttgtcatgttttttattcattattttccatgctattggaatcctaagaataaagttttatactagtttttgtgtaattttt- 209  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||| |||| |||||| |||||||||| |||||||| |||| |||| || ||||||||     
T  26129163 cttttcaaacaagtagtgttttcatgtgttttattcactattttcaatgcgattggattcctaagaatcaagttttaaactaattttggtataatttttg 26129064  T
Q  210 -gtgtttagtctactgctt 227  Q
     ||||||||||||||||||    
T  26129063 tgtgtttagtctactgctt 26129045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 26179319 - 26179101
Alignment:
Q  11 catcatcaactcatttagatgtaatagattcatcatcaggccagttagttacttctgactgtaaaacatcttcacaggtgagtttatagtatgtaatcaa 110  Q
    |||| |||||||||   |||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||||| |||| ||| |||    
T  26179319 catcgtcaactcatactgatgtaataggttcatcatcaggccagttagttacttctgagcgtaaaatatcttcactggtgagtttatcgtatctaaccaa 26179220  T
Q  111 cttttcaaacaagtagtgttgtcatgttttttattcattattttccatgctattggaatcctaagaataaagttttatactagtttttgtgtaatttt-- 208  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||| |||| |||||| |||||||||| |||||||| |||| |||| || |||||||      
T  26179219 cttttcaaacaagtagtgttttcatgtgttttattcactattttcaatgcgattggattcctaagaatcaagttttaaactaattttggtataattttgg 26179120  T
Q  209 tgtgtttagtctactgctt 227  Q
    |||||||||||||||||||    
T  26179119 tgtgtttagtctactgctt 26179101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 300 - 399
Target Start/End: Complemental strand, 26233045 - 26232945
Alignment:
Q  300 tgtagtcaaattaagct-ttttatttgtgagttgtgagctcaacgacaagagtttgaccttctaactttaagggacaaggttcaaatccccttaggggcg 398  Q
    ||||||| ||||||||| ||||||||||||||||||||||||  | ||||||||||||||| |||||||||||||||||||||||||||||| | |||||    
T  26233045 tgtagtcgaattaagctcttttatttgtgagttgtgagctcagaggcaagagtttgaccttgtaactttaagggacaaggttcaaatcccctcatgggcg 26232946  T
Q  399 t 399  Q
    |    
T  26232945 t 26232945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 26110699 - 26110608
Alignment:
Q  300 tgtagtcaaattaagct-ttttatttgtgagttgtgagctcaacgacaagagtttgaccttctaactttaagggacaaggttcaaatcccct 390  Q
    ||||||| ||||||||| ||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||||||||||||||||||    
T  26110699 tgtagtcgaattaagctcttttatttgtgagttgtgagctcagaggcaagagtttgaccttttaactttaagggacaaggttcaaatcccct 26110608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 300 - 390
Target Start/End: Complemental strand, 26204981 - 26204890
Alignment:
Q  300 tgtagtcaaattaagct-ttttatttgtgagttgtgagctcaacgacaagagtttgaccttctaactttaagggacaaggttcaaatcccct 390  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||  | ||||||||||||||| ||||||||||||||||||||||||||||||    
T  26204981 tgtagtcgaattaagctcttttatttgtgagttgtgatctcagaggcaagagtttgaccttgtaactttaagggacaaggttcaaatcccct 26204890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 26235773 - 26235691
Alignment:
Q  14 catcaactcatttagatgtaatagattcatcatcaggccagttagttacttctgactgtaaaacatcttcacaggtgagttta 96  Q
    ||||||||||||||||||||  || |||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  26235773 catcaactcatttagatgtagcaggttcatcatcaggacagttagttacttctgagtgtaaaacatcttcacatgtgagttta 26235691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 26113455 - 26113370
Alignment:
Q  10 acatcatcaactcatttagatgtaatagattcatcatcaggccagttagttacttctgactgtaaaacatcttcacaggtgagttt 95  Q
    ||||| ||||||||||| |||| | ||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  26113455 acatcgtcaactcatttcgatgcagtaggttcatcatcaagccagttagttacttctgagtgtaaaacatcttcacaggtgagttt 26113370  T

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Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 26209032 - 26208950
Alignment:
Q  14 catcaactcatttagatgtaatagattcatcatcaggccagttagttacttctgactgtaaaacatcttcacaggtgagttta 96  Q
    ||||| ||||||||||||||  || |||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  26209032 catcagctcatttagatgtagcaggttcatcatcaggacagttagttacttctgagtgtaaaacatcttcacatgtgagttta 26208950  T

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Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 369
Target Start/End: Complemental strand, 26127699 - 26127634
Alignment:
Q  300 tgtagtcaaattaagctttttatttgtgagttgtgagctcaacgacaagagtttgaccttctaactttaa 369  Q
    |||||||||||||||||    |||||||||||||||||||| || ||||||||||||||| |||||||||    
T  26127699 tgtagtcaaattaagct----atttgtgagttgtgagctcagcggcaagagtttgaccttataactttaa 26127634  T

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Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 369
Target Start/End: Complemental strand, 26177749 - 26177684
Alignment:
Q  300 tgtagtcaaattaagctttttatttgtgagttgtgagctcaacgacaagagtttgaccttctaactttaa 369  Q
    |||||||||||||||||    |||||||||||||||||||| || ||||||||||||||| |||||||||    
T  26177749 tgtagtcaaattaagct----atttgtgagttgtgagctcagcggcaagagtttgaccttataactttaa 26177684  T

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Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 500 - 550
Target Start/End: Complemental strand, 26208721 - 26208670
Alignment:
Q  500 ctttcccaattttatttttaaaaa-caagactcttcctgacttaagcataca 550  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  26208721 ctttcccaattttatttttaaaaaacaagactcttcctgacttaaacataca 26208670  T

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Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 500 - 550
Target Start/End: Complemental strand, 26235462 - 26235411
Alignment:
Q  500 ctttcccaattttatttttaaaaa-caagactcttcctgacttaagcataca 550  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  26235462 ctttcccaattttatttttaaaaaacaagactcttcctgacttaaacataca 26235411  T

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Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 557
Target Start/End: Complemental strand, 26113002 - 26112942
Alignment:
Q  498 tcctttcccaattttattttta-aaaacaagactcttcctgacttaagcatacacagctaa 557  Q
    |||||||||||||||||||||| |||||||  |||||||||||||| | ||||||||||||    
T  26113002 tcctttcccaattttatttttaaaaaacaaatctcttcctgacttaggtatacacagctaa 26112942  T

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Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 553
Target Start/End: Complemental strand, 26201681 - 26201623
Alignment:
Q  498 tcctttcccaattttattttta---aaaacaagactcttcctgacttaagcatacacag 553  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||  ||||||||    
T  26201681 tcctttcccaattttatttttataaaaaacaagactcttcctgacttaaatatacacag 26201623  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 390
Target Start/End: Complemental strand, 26113290 - 26113253
Alignment:
Q  353 tgaccttctaactttaagggacaaggttcaaatcccct 390  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  26113290 tgaccttgtaaccttaagggacaaggttcaaatcccct 26113253  T

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Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 557
Target Start/End: Complemental strand, 26139470 - 26139413
Alignment:
Q  501 tttcccaattttatttttaaaaa-caagactcttcctgacttaagcatacacagctaa 557  Q
    ||||| || |||||||||||||| ||||||||| ||||||||||  ||||||||||||    
T  26139470 tttcctaactttatttttaaaaaacaagactctacctgacttaaatatacacagctaa 26139413  T

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