View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19928_low_4 (Length: 470)
Name: NF19928_low_4
Description: NF19928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19928_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 426; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 1 - 455
Target Start/End: Complemental strand, 44842626 - 44842172
Alignment:
| Q |
1 |
tccatgccttaaccaacaaaattataaatttgagtaataattcatcgacatcatcatgttcaagcaacattgttcgacctcgtctttatattgcatggat |
100 |
Q |
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| T |
44842626 |
tccatgccttaaccaacaaaattataaatttgagtaataattcattgacatcatcatgttcaagcaacattgttcgacctcgtctttatattgcatggat |
44842527 |
T |
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| Q |
101 |
tctcctttgtgttttccaagtttgtgttggtttaggaattgaaggaagcattttggttggtttatatgactctgaatcgtccagttttggtgttgaaagg |
200 |
Q |
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| T |
44842526 |
tctcctttgtgttttccaagtttgtgttggtttaggaattgaaggaagcattttggttggtttatatgactctgaatcgtccagttttggtgttgaaagg |
44842427 |
T |
|
| Q |
201 |
agtttcttgagcagagttgnnnnnnnattgggattgcatgaaacaacaagagtttggtgtagaatggttgtaaagccagtggtggatgacacggtttttg |
300 |
Q |
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| T |
44842426 |
agtttcttgagcagagttgtttttttattgggattgcatgaaacaacaagagtttggtgtagaatggttgtaaagccagtggtggatgacacggtttttg |
44842327 |
T |
|
| Q |
301 |
ggggtgtaattaggaaagaaagatgggttgagaaattgggtgtggatatgtgtttaggaattttatggtggtggaaattgagggatgatgttgagaattt |
400 |
Q |
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| T |
44842326 |
ggggtgtaattaggaaagaaagatgggttgagaaattgggtgtggatatgtgtttaggaattttatggtggtggaaattgagggatgatgttgagaattt |
44842227 |
T |
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| Q |
401 |
ggtgattatgagtgaggcaaagaaagatcaattgatggatgttggaattaatgat |
455 |
Q |
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| T |
44842226 |
ggtggttatgagtgaggcaaagaaagatcaattgatggatgttggaattaatgat |
44842172 |
T |
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