View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19929_high_11 (Length: 669)
Name: NF19929_high_11
Description: NF19929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19929_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 535; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 535; E-Value: 0
Query Start/End: Original strand, 31 - 577
Target Start/End: Original strand, 45641613 - 45642159
Alignment:
| Q |
31 |
ggcaagaatagcatcagaacatgtagagaaactcatagtgagaatatctgttgtcattttcatttagagcaatgtggtccattaagttgtggttaaaata |
130 |
Q |
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| T |
45641613 |
ggcaagaatagcatcagaacatgtagagaaactcatagtgagaatatctgttgtcattttcatttagagcaatgtggtccattaagttgtggttaaaata |
45641712 |
T |
|
| Q |
131 |
tgaaagggtgagaactgcttgatcagctgttggtttgaaagaggtggatgaaaattggaatccttgacattcaggaacctctacttgtcctacctctttt |
230 |
Q |
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| T |
45641713 |
tgaaagggtgagaactgcttgatcagctgttggtttgaaagaggtggatgaaaattggaatccttgacattcaggaacctctacttgtcctacctctttt |
45641812 |
T |
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| Q |
231 |
gatcgtccgagaagtggtgtattgtgtatataaaaactgaattccctgctatattcataatctctttgttagctgtttgaaatttttgattggtttcctc |
330 |
Q |
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| T |
45641813 |
gatcgtccgagaagtggtgtattgtgtatataaaaactgaattccctgctatattcataatctctttgttagctgtttgaaatttttgattggtttcctc |
45641912 |
T |
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| Q |
331 |
atgtacacatctttttcattcatgttttgagtcattgttatttataaaattagcaactgaaacacaagtctttgttactgttgttcagttggattgagtg |
430 |
Q |
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| T |
45641913 |
atgtactcatctttttcattcatgttttgagtcattgttatttataaaattagcaactgaaacacaagtctttgttactgtcgttcagttggattgagtg |
45642012 |
T |
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| Q |
431 |
gcatgctctgattcttatgtatatgtttttgaggatatatgttaatgcctcacatattttaatcttcatatatttggaaagctgtagagaacttagaaac |
530 |
Q |
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| T |
45642013 |
gcatgctctgattcttatgtatatgtttttgaggatatatgttaatgcctcacatattttaatcttcatatatttggaaagctgtagagaacttagaaac |
45642112 |
T |
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| Q |
531 |
aaaatttgcattctggattgtatacttgggtcatagattggtatggc |
577 |
Q |
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| T |
45642113 |
aaaatttgcattctggattgtatacttggctcatagattggtatggc |
45642159 |
T |
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