View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19929_high_3 (Length: 829)

Name: NF19929_high_3
Description: NF19929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19929_high_3
NF19929_high_3
[»] chr3 (53 HSPs)
chr3 (55-483)||(19855350-19855781)
chr3 (555-819)||(19855853-19856117)
chr3 (157-343)||(54253778-54253967)
chr3 (156-343)||(3283255-3283445)
chr3 (168-342)||(13700234-13700411)
chr3 (168-343)||(54160387-54160563)
chr3 (178-343)||(8351061-8351224)
chr3 (170-343)||(8674537-8674713)
chr3 (169-343)||(54411775-54411952)
chr3 (170-343)||(52945571-52945746)
chr3 (168-344)||(21395843-21396022)
chr3 (168-344)||(50090812-50090991)
chr3 (188-343)||(34673327-34673485)
chr3 (166-343)||(39328409-39328589)
chr3 (195-343)||(41355439-41355590)
chr3 (168-343)||(42092806-42092985)
chr3 (170-326)||(45408247-45408406)
chr3 (192-343)||(4125996-4126150)
chr3 (194-343)||(35280433-35280585)
chr3 (193-333)||(11238690-11238833)
chr3 (188-301)||(20513059-20513172)
chr3 (168-325)||(35711831-35711989)
chr3 (187-340)||(38101175-38101331)
chr3 (169-301)||(37702598-37702730)
chr3 (180-343)||(9665320-9665486)
chr3 (156-325)||(5232615-5232790)
chr3 (202-301)||(19228596-19228695)
chr3 (227-343)||(21481947-21482055)
chr3 (168-343)||(6125769-6125948)
chr3 (168-301)||(36418712-36418845)
chr3 (226-343)||(27037966-27038086)
chr3 (225-343)||(27026620-27026741)
chr3 (169-301)||(35180573-35180705)
chr3 (250-343)||(46969881-46969977)
chr3 (172-269)||(34673528-34673625)
chr3 (193-339)||(52089066-52089216)
chr3 (224-290)||(53518908-53518974)
chr3 (178-274)||(27432053-27432150)
chr3 (188-269)||(34673466-34673547)
chr3 (189-290)||(36227811-36227911)
chr3 (168-268)||(39867131-39867231)
chr3 (188-290)||(46354034-46354137)
chr3 (170-217)||(27027332-27027379)
chr3 (228-278)||(45408392-45408441)
chr3 (250-343)||(51614592-51614688)
chr3 (246-331)||(27418759-27418845)
chr3 (213-267)||(4043919-4043973)
chr3 (170-216)||(46770495-46770541)
chr3 (251-331)||(46770514-46770597)
chr3 (18-51)||(19855288-19855321)
chr3 (185-235)||(21481727-21481777)
chr3 (241-283)||(53518868-53518910)
chr3 (170-211)||(46969954-46969995)
[»] chr4 (41 HSPs)
chr4 (168-343)||(34728203-34728381)
chr4 (180-343)||(32626045-32626211)
chr4 (156-343)||(51682542-51682732)
chr4 (168-343)||(51702455-51702633)
chr4 (168-343)||(6137258-6137436)
chr4 (168-343)||(42434212-42434390)
chr4 (156-343)||(32089946-32090136)
chr4 (157-343)||(20835694-20835883)
chr4 (168-343)||(43837673-43837851)
chr4 (168-343)||(20503431-20503609)
chr4 (170-343)||(34041175-34041351)
chr4 (172-343)||(32867987-32868161)
chr4 (207-340)||(27907027-27907163)
chr4 (170-343)||(33117514-33117690)
chr4 (193-343)||(13372395-13372548)
chr4 (193-343)||(13382596-13382749)
chr4 (168-326)||(13386982-13387143)
chr4 (170-344)||(19329360-19329537)
chr4 (180-327)||(11020347-11020497)
chr4 (170-301)||(38427097-38427228)
chr4 (191-301)||(6944588-6944698)
chr4 (169-344)||(48860708-48860883)
chr4 (178-343)||(47960278-47960446)
chr4 (156-296)||(5975642-5975782)
chr4 (199-344)||(40875241-40875389)
chr4 (191-340)||(16467139-16467295)
chr4 (180-343)||(40479857-40480023)
chr4 (190-340)||(38962427-38962578)
chr4 (246-343)||(28589220-28589320)
chr4 (169-328)||(13387863-13388024)
chr4 (172-300)||(52719062-52719192)
chr4 (170-336)||(52344494-52344664)
chr4 (188-286)||(28755403-28755504)
chr4 (171-242)||(38963329-38963400)
chr4 (225-330)||(53773681-53773790)
chr4 (250-343)||(7645865-7645961)
chr4 (166-244)||(22254219-22254297)
chr4 (168-216)||(54158115-54158163)
chr4 (249-343)||(38792250-38792347)
chr4 (250-322)||(42560130-42560205)
chr4 (249-290)||(15725363-15725404)
[»] chr2 (40 HSPs)
chr2 (156-343)||(29471611-29471801)
chr2 (156-343)||(9548187-9548377)
chr2 (170-344)||(12725693-12725870)
chr2 (157-343)||(18924516-18924705)
chr2 (171-340)||(10664671-10664843)
chr2 (156-343)||(24314201-24314392)
chr2 (169-340)||(1749896-1750072)
chr2 (187-343)||(21950657-21950816)
chr2 (169-332)||(39089091-39089257)
chr2 (170-343)||(42090415-42090591)
chr2 (213-343)||(12895372-12895504)
chr2 (166-343)||(16719703-16719884)
chr2 (250-343)||(10862595-10862691)
chr2 (156-301)||(33740221-33740366)
chr2 (250-343)||(34450334-34450430)
chr2 (178-301)||(44539865-44539989)
chr2 (157-325)||(4206417-4206591)
chr2 (250-343)||(27097052-27097148)
chr2 (170-333)||(39961525-39961691)
chr2 (169-324)||(25880575-25880737)
chr2 (222-343)||(5534266-5534390)
chr2 (197-329)||(34125539-34125674)
chr2 (250-343)||(36779781-36779879)
chr2 (225-293)||(2969678-2969746)
chr2 (169-249)||(25810479-25810559)
chr2 (251-301)||(6231240-6231290)
chr2 (250-327)||(27175465-27175545)
chr2 (170-269)||(39434985-39435084)
chr2 (302-343)||(39830678-39830719)
chr2 (235-283)||(2969625-2969673)
chr2 (250-337)||(14747341-14747431)
chr2 (168-211)||(10862575-10862618)
chr2 (250-293)||(29511868-29511911)
chr2 (156-211)||(6231207-6231262)
chr2 (156-211)||(14747408-14747463)
chr2 (173-216)||(27175517-27175560)
chr2 (156-211)||(29511888-29511943)
chr2 (156-211)||(36779856-36779911)
chr2 (249-290)||(23387309-23387350)
chr2 (156-201)||(27097020-27097065)
[»] chr8 (48 HSPs)
chr8 (156-343)||(10078291-10078478)
chr8 (178-343)||(16930784-16930952)
chr8 (156-343)||(30774112-30774302)
chr8 (166-340)||(26912306-26912482)
chr8 (168-341)||(23472513-23472688)
chr8 (156-300)||(9479401-9479545)
chr8 (169-343)||(9478711-9478888)
chr8 (178-343)||(44873921-44874090)
chr8 (156-340)||(22812305-22812491)
chr8 (168-343)||(33568048-33568226)
chr8 (169-301)||(38498275-38498407)
chr8 (178-301)||(39077308-39077431)
chr8 (156-333)||(42806196-42806378)
chr8 (168-343)||(28539162-28539340)
chr8 (168-336)||(12176193-12176364)
chr8 (168-336)||(12420621-12420792)
chr8 (171-343)||(12295139-12295321)
chr8 (222-343)||(19922563-19922687)
chr8 (191-331)||(14916654-14916797)
chr8 (193-328)||(28969095-28969233)
chr8 (170-301)||(5224300-5224430)
chr8 (195-336)||(253937-254081)
chr8 (195-336)||(661777-661921)
chr8 (170-343)||(16784331-16784499)
chr8 (168-301)||(14041329-14041462)
chr8 (189-300)||(40067578-40067689)
chr8 (195-336)||(847575-847719)
chr8 (250-343)||(3210847-3210943)
chr8 (179-332)||(31272765-31272921)
chr8 (171-291)||(13326966-13327084)
chr8 (222-301)||(38092154-38092233)
chr8 (190-278)||(41829567-41829655)
chr8 (240-340)||(41624634-41624737)
chr8 (250-332)||(16645471-16645556)
chr8 (156-330)||(1271015-1271196)
chr8 (179-301)||(1983503-1983625)
chr8 (178-255)||(44473756-44473833)
chr8 (250-300)||(39589964-39590014)
chr8 (250-296)||(39077162-39077208)
chr8 (172-217)||(14371613-14371658)
chr8 (156-208)||(16645536-16645588)
chr8 (156-211)||(3210920-3210975)
chr8 (168-211)||(39589991-39590034)
chr8 (278-343)||(40067462-40067530)
chr8 (276-341)||(44508887-44508955)
chr8 (178-238)||(41624976-41625036)
chr8 (250-293)||(40301372-40301414)
chr8 (249-290)||(35550773-35550814)
[»] chr5 (32 HSPs)
chr5 (156-343)||(23204363-23204553)
chr5 (168-343)||(9741724-9741902)
chr5 (169-343)||(38758603-38758779)
chr5 (167-336)||(37172381-37172553)
chr5 (156-343)||(18015630-18015819)
chr5 (168-343)||(17689321-17689498)
chr5 (156-301)||(20269220-20269365)
chr5 (191-343)||(28813040-28813195)
chr5 (170-343)||(27365716-27365892)
chr5 (191-340)||(38293463-38293616)
chr5 (156-291)||(28038241-28038376)
chr5 (156-301)||(19323727-19323872)
chr5 (168-299)||(16994168-16994299)
chr5 (210-343)||(19995319-19995452)
chr5 (200-301)||(19325064-19325166)
chr5 (188-301)||(15978821-15978934)
chr5 (168-330)||(13960372-13960537)
chr5 (731-813)||(27473664-27473746)
chr5 (166-269)||(16273624-16273727)
chr5 (222-332)||(26730298-26730410)
chr5 (168-249)||(33429221-33429302)
chr5 (249-343)||(19863090-19863187)
chr5 (250-320)||(16490924-16490997)
chr5 (168-290)||(31056411-31056532)
chr5 (178-290)||(31042562-31042673)
chr5 (168-238)||(21913836-21913906)
chr5 (250-325)||(16490718-16490795)
chr5 (257-341)||(19323908-19323989)
chr5 (250-325)||(23129597-23129675)
chr5 (231-290)||(5497782-5497840)
chr5 (228-291)||(35425249-35425310)
chr5 (249-290)||(33696220-33696261)
[»] chr7 (44 HSPs)
chr7 (169-343)||(41378350-41378527)
chr7 (156-343)||(35983093-35983283)
chr7 (156-343)||(36004505-36004695)
chr7 (156-343)||(5995031-5995222)
chr7 (171-343)||(21993471-21993646)
chr7 (168-343)||(48227210-48227388)
chr7 (169-343)||(9522445-9522619)
chr7 (168-343)||(31953157-31953335)
chr7 (168-343)||(3203266-3203448)
chr7 (191-343)||(24611437-24611592)
chr7 (178-343)||(41037133-41037301)
chr7 (202-343)||(41585858-41586002)
chr7 (156-343)||(27130983-27131173)
chr7 (156-343)||(45099957-45100148)
chr7 (170-343)||(35221644-35221825)
chr7 (166-344)||(46003710-46003892)
chr7 (171-343)||(3961178-3961353)
chr7 (236-343)||(26927944-26928054)
chr7 (170-290)||(24251831-24251948)
chr7 (166-301)||(43077517-43077652)
chr7 (246-343)||(14656530-14656630)
chr7 (156-293)||(42373491-42373627)
chr7 (189-319)||(20568277-20568411)
chr7 (168-293)||(38368158-38368282)
chr7 (170-288)||(27946861-27946978)
chr7 (193-330)||(48709027-48709167)
chr7 (227-343)||(3349993-3350112)
chr7 (253-343)||(28333742-28333835)
chr7 (250-343)||(32392216-32392313)
chr7 (178-290)||(12362868-12362979)
chr7 (251-331)||(7596870-7596953)
chr7 (240-344)||(3875209-3875315)
chr7 (250-300)||(20009206-20009256)
chr7 (250-300)||(48624971-48625021)
chr7 (188-276)||(36343021-36343110)
chr7 (170-236)||(28059314-28059379)
chr7 (168-214)||(32392287-32392333)
chr7 (227-293)||(44868034-44868099)
chr7 (178-216)||(14313960-14313998)
chr7 (166-239)||(3875105-3875178)
chr7 (206-249)||(26928541-26928584)
chr7 (168-211)||(48624998-48625041)
chr7 (171-216)||(20417981-20418026)
chr7 (188-217)||(48709081-48709110)
[»] chr6 (23 HSPs)
chr6 (187-343)||(15081138-15081297)
chr6 (171-344)||(10074994-10075170)
chr6 (179-336)||(12159435-12159595)
chr6 (165-343)||(6322485-6322666)
chr6 (172-343)||(17347026-17347200)
chr6 (156-343)||(18102439-18102621)
chr6 (156-327)||(18096319-18096485)
chr6 (168-293)||(9891371-9891496)
chr6 (197-296)||(19104310-19104409)
chr6 (185-318)||(9533380-9533519)
chr6 (256-343)||(29427214-29427304)
chr6 (222-343)||(14975386-14975508)
chr6 (250-353)||(19143648-19143754)
chr6 (233-301)||(25090546-25090614)
chr6 (201-343)||(7190635-7190772)
chr6 (237-321)||(32645707-32645794)
chr6 (247-298)||(24553235-24553286)
chr6 (250-325)||(28295569-28295650)
chr6 (250-325)||(28516423-28516504)
chr6 (156-211)||(19143616-19143671)
chr6 (302-332)||(19102075-19102105)
chr6 (249-287)||(29375231-29375269)
chr6 (246-291)||(8062086-8062130)
[»] chr1 (45 HSPs)
chr1 (188-344)||(43939431-43939590)
chr1 (185-343)||(24992845-24993006)
chr1 (156-343)||(1838640-1838831)
chr1 (188-337)||(25670968-25671115)
chr1 (168-343)||(30414082-30414260)
chr1 (169-343)||(25825278-25825455)
chr1 (170-343)||(1627655-1627830)
chr1 (171-344)||(14463321-14463497)
chr1 (169-343)||(2964842-2965019)
chr1 (166-331)||(44720062-44720229)
chr1 (168-301)||(1406708-1406841)
chr1 (209-343)||(10769749-10769886)
chr1 (168-298)||(7336086-7336216)
chr1 (171-337)||(9005430-9005597)
chr1 (170-344)||(26213678-26213855)
chr1 (210-343)||(8549542-8549678)
chr1 (178-300)||(40460990-40461112)
chr1 (171-334)||(5226801-5226967)
chr1 (156-277)||(17452945-17453066)
chr1 (227-343)||(26897311-26897429)
chr1 (188-291)||(42470775-42470878)
chr1 (171-336)||(17168157-17168325)
chr1 (171-293)||(47921562-47921684)
chr1 (241-333)||(42470572-42470667)
chr1 (194-286)||(15661119-15661211)
chr1 (246-332)||(49660364-49660453)
chr1 (250-343)||(1469675-1469771)
chr1 (254-343)||(26284487-26284579)
chr1 (171-268)||(30819571-30819668)
chr1 (250-343)||(26842829-26842925)
chr1 (253-332)||(4105587-4105669)
chr1 (178-251)||(41146551-41146624)
chr1 (198-343)||(6813855-6814005)
chr1 (302-343)||(15660856-15660897)
chr1 (168-237)||(49659890-49659959)
chr1 (156-208)||(1469751-1469803)
chr1 (272-343)||(48875086-48875160)
chr1 (257-330)||(38509637-38509713)
chr1 (167-234)||(38509712-38509779)
chr1 (225-286)||(10835604-10835664)
chr1 (167-239)||(9679714-9679786)
chr1 (188-260)||(30289030-30289102)
chr1 (265-328)||(9338818-9338886)
chr1 (169-211)||(26284560-26284602)
chr1 (249-290)||(20201672-20201713)
[»] scaffold0001 (1 HSPs)
scaffold0001 (168-343)||(392404-392582)
[»] scaffold0168 (1 HSPs)
scaffold0168 (168-319)||(35052-35206)
[»] scaffold0093 (1 HSPs)
scaffold0093 (173-340)||(9155-9324)
[»] scaffold0004 (1 HSPs)
scaffold0004 (188-343)||(121613-121771)
[»] scaffold0002 (2 HSPs)
scaffold0002 (210-343)||(94789-94924)
scaffold0002 (178-298)||(478318-478438)
[»] scaffold0006 (1 HSPs)
scaffold0006 (169-301)||(231154-231286)
[»] scaffold0086 (1 HSPs)
scaffold0086 (250-343)||(8508-8604)
[»] scaffold0246 (1 HSPs)
scaffold0246 (180-343)||(17796-17962)
[»] scaffold0057 (1 HSPs)
scaffold0057 (249-343)||(75002-75099)
[»] scaffold0009 (1 HSPs)
scaffold0009 (170-284)||(49821-49934)
[»] scaffold0091 (1 HSPs)
scaffold0091 (201-301)||(3748-3848)
[»] scaffold0003 (2 HSPs)
scaffold0003 (173-336)||(103232-103399)
scaffold0003 (166-216)||(88218-88268)
[»] scaffold0112 (2 HSPs)
scaffold0112 (250-340)||(35882-35975)
scaffold0112 (170-211)||(35952-35993)
[»] scaffold0007 (1 HSPs)
scaffold0007 (172-244)||(77027-77099)


Alignment Details
Target: chr3 (Bit Score: 374; Significance: 0; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 55 - 483
Target Start/End: Original strand, 19855350 - 19855781
Alignment:
Q  55 aaaccttactgcttatttacataggttacatatctcttgactatcctcgaacccataacgaagagagtcagaaagtcacactccatcgactaacaagtta 154  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  19855350 aaaccttactgcttatttacataggctacatatctcttgactatcctcgaacccataatgaagagagtcagaaagtcacactccattgactaacaagtta 19855449  T
Q  155 catatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataattttta 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19855450 catatataaagatgggttttgcgagaagaaaccttttatgaaggtgtctattagcaagttattctacgagcatttgctaaaagacaccaactaattttta 19855549  T
Q  255 tgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacacgaggtgtggattgctaaaagacaccttcatgggtggcttct---aaaacccta 351  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||   |||||||||    
T  19855550 tgaaggtgtcttttagcaaaattataactaaaaagtggaaatcacacgaggtgtggattgctaaaagacaccttcagaggtggcttctagcaaaacccta 19855649  T
Q  352 taaagatttgcaagaaagataatctgcattaatctattgtgtatttctcttttcatgccctctgatttataagaatcatatgagtaattatttgaaaatt 451  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19855650 taaagatttgcaacaaagataatctgcattaatctattgtgtatttctcttttcatgccctctgatttataagaatcatatgagtaattatttgaaaatt 19855749  T
Q  452 ggataatatatttatgcagcaccaaaattaag 483  Q
    ||||||||||||||||||||||| ||||||||    
T  19855750 ggataatatatttatgcagcacctaaattaag 19855781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 555 - 819
Target Start/End: Original strand, 19855853 - 19856117
Alignment:
Q  555 acttaaggtatgcttacatggttgcagacaagataaatatgtgtatctttttacttttatatgatttctctctgtacattgtttgtgcatgatgtaaagg 654  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19855853 acttaaggtatgcttacatggttgcagacaagataaatatgtgtatctttttacttttatatgatttctctctgtacattgtttgtgcatgatgtaaagg 19855952  T
Q  655 ttactttgttggttgcctttcttgctatgtcctcctctcttagatctcatatttttcttcaactgtgaatcttctctgctattgattttgaaaatgcatt 754  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19855953 ttactttgttgcttgcctttcttgctatgtcctcctctcttagatctcatatttttcttcaactgtgactcttctctgctattgattttgaaaatgcatt 19856052  T
Q  755 tctcattgtaatctcaaatttcattatttatccttctatgcatgatcattcctcttcttctcact 819  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19856053 tctcattgtaatctcaaatttcattatttatccttctatgcatgatcattcctcttcttttcact 19856117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 157 - 343
Target Start/End: Complemental strand, 54253967 - 54253778
Alignment:
Q  157 tatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatg 256  Q
    |||||| | ||||||||||| ||||||  | |||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  54253967 tatatatatatgggttttgctagaagacgcattttatgaaggtgtattttagcaagttattctatgagcatttcctaaaagacaccaactaatttttatg 54253868  T
Q  257 aaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||    
T  54253867 aaggtgtcttttaacaaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttcta 54253778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 156 - 343
Target Start/End: Complemental strand, 3283445 - 3283255
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||||| |||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  3283445 atatatatatatgggttttgctagaagacacattttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaactaatttttat 3283346  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||| ||||| ||||||||||||||  |||||||||   ||||||||| |||||||||||||||||||||| |||||||||    
T  3283345 gaaggtgtcttttagcaaagctataactaaaaagtaaaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttcta 3283255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 168 - 342
Target Start/End: Complemental strand, 13700411 - 13700234
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| || |||||||||||||| |||||  ||||||||||  ||||||||||||||||||||||| |||||||||||||||| |||||    
T  13700411 gggttttgctagaagacacattttatgaaggtgttttttaataagttattctttgagcatttgctaaaagacaccaactaatttttatgaaggtatcttt 13700312  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttct 342  Q
    ||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||    
T  13700311 taacaaagttataactaaaaagtggaaatcacacattgaggtgtgggttgctaaaagacaccttcatgggtggcttct 13700234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 54160387 - 54160563
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||| ||||||||||||||||||||||    
T  54160387 gggttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctataagcatttgttaaaagacaccaactaatttttatgaaggtgtcttt 54160486  T
Q  268 taacaaagttataactaaaaagtggaaatca-cacgaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||| |||||||| |||||| |  |||||||||||| |||||||||| |||||| |||||||||||    
T  54160487 taacaaagttataacaaaaaagtgaaaatcaccttgaggtgtggattactaaaagacatcttcattggtggcttcta 54160563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 178 - 343
Target Start/End: Original strand, 8351061 - 8351224
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtt 277  Q
    |||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  8351061 agaagacactttttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaactaatttttatgaatgtgtcttttaacaaagtt 8351160  T
Q  278 ataactaaaaagtggaaatcacacgaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||| |||||||||||  |||||||| |||||||||||||||||| | ||||| |||||    
T  8351161 ataactaaaaaatggaaatcaca--aggtgtgggttgctaaaagacaccttcttaggtggtttcta 8351224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 170 - 343
Target Start/End: Original strand, 8674537 - 8674713
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||| || ||||||||||||||| | ||||| | ||||||||||||||||||||||    
T  8674537 gttttgctagaagacaccttttatgaaagtgtcttttagcaagttattttatgagcatttgctaaaacagaccaactgatttttatgaaggtgtctttta 8674636  T
Q  270 acaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
     |||||||||||||||||||||||||||||||   ||||| || ||||||||||||||||||||||| |||||||||    
T  8674637 gcaaagttataactaaaaagtggaaatcacaccttgaggtatgaattgctaaaagacaccttcatggatggcttcta 8674713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 169 - 343
Target Start/End: Complemental strand, 54411952 - 54411775
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||| |||||| ||||||||||||||||| |||||||||| ||||||| || |||||||||||||||||||| |||||||||| ||||||| ||||    
T  54411952 ggttttgctagaagacaccttttatgaaggtgttttttagcaagatattctatgatcatttgctaaaagacaccaactaatttttataaaggtgtttttt 54411853  T
Q  269 aacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    | |||||||||||||||||||||||||||||||   ||||||| | |||||||||||||| |||||| ||||||||||    
T  54411852 agcaaagttataactaaaaagtggaaatcacaccttgaggtgtaggttgctaaaagacactttcatgagtggcttcta 54411775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 170 - 343
Target Start/End: Original strand, 52945571 - 52945746
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| ||||||| | ||||||||| ||||||||||||||||||||| | ||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  52945571 gttttgctagaagaa-cattttatgaaagtgtcttttagcaagttattcaatgagcatttggtaaaaggcaccaactaatttttatgaaggtgtctttta 52945669  T
Q  270 acaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
     |||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||| |||||||||    
T  52945670 gcaaagttataactaaaaagtggaaatcacactttgaggtgtgagttgctaaaagacaccttcatggatggcttcta 52945746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 168 - 344
Target Start/End: Complemental strand, 21396022 - 21395843
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| ||| |||||| || ||||||||    
T  21396022 gggttttgctagaagacaccttttatgaaggtgttttttagcaagttattctatgagcatttgttaaaagacaccaactaaattttataaatgtgtcttt 21395923  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttctaa 344  Q
    || ||||||||||||||||||||| |||||||||   |||| |||| |||  ||||||||||||||||||||||||||||    
T  21395922 tagcaaagttataactaaaaagtgaaaatcacaccttgaggcgtgggttgtcaaaagacaccttcatgggtggcttctaa 21395843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 168 - 344
Target Start/End: Complemental strand, 50090991 - 50090812
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||  | |||||| | ||||||||||| ||||||||||||| |||| |||    
T  50090991 gggttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctattaacatttggtgaaagacaccaactaatttttatgaaagtgttttt 50090892  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttctaa 344  Q
    || |||| ||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| || |||||||    
T  50090891 tagcaaaattataactaaaaagtggaaatcacaccttaaggtgtggattgctaaaagacaccttcatggatgacttctaa 50090812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 34673485 - 34673327
Alignment:
Q  188 ttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaa 287  Q
    |||||||||||||||||||||||||||||| ||  || ||||| ||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||    
T  34673485 ttttatgaaggtgtcttttagcaagttattatattagtatttgttaaaagacatcaactaatttttatgaaggtgtcttttagcaaagttataactaaaa 34673386  T
Q  288 agtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||   ||||||||| |||||||||||||||||||||| |||||||||    
T  34673385 agtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttcta 34673327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 166 - 343
Target Start/End: Original strand, 39328409 - 39328589
Alignment:
Q  166 atgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtct 265  Q
    ||||| ||||| |||||| |||||||||||||||||||||||||||||||| |||    |||||  ||||||||||||| ||||||||||||| ||||||    
T  39328409 atggggtttgctagaagacaccttttatgaaggtgtcttttagcaagttatcctattgacatttcttaaaagacaccaactaatttttatgaaagtgtct 39328508  T
Q  266 tttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||| |||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||||| | |||||||||    
T  39328509 tttagcaaagttataactaaaaagtggaaatcacaccttgaggtgtggattgttaaaagacaccttcattgatggcttcta 39328589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 195 - 343
Target Start/End: Original strand, 41355439 - 41355590
Alignment:
Q  195 aaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaa 294  Q
    ||||||||||||| |||||||||| | ||||||||| ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||    
T  41355439 aaggtgtcttttaacaagttattcaatgagcatttgttaaaagacaccaactaatttttatgaaggtgtcttatagcaaagttataactaaaaagtggaa 41355538  T
Q  295 atcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||   ||| ||||| ||||||||||||||||||||||||||||||||    
T  41355539 atcacaccttgagttgtgggttgctaaaagacaccttcatgggtggcttcta 41355590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 42092806 - 42092985
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtg-tctt 266  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||  |||| ||||||||||||| |||||||||| |||||| | ||    
T  42092806 gggttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgagtctttgttaaaagacaccaattaatttttataaaggtgttttt 42092905  T
Q  267 ttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||| |||||||||||||||||| ||||||||| ||   ||||||||||||||||||| |||||||||||| |||||||||    
T  42092906 ttagcaaagttataactaaaaaatggaaatcataccttgaggtgtggattgctaaaaaacaccttcatggatggcttcta 42092985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 170 - 326
Target Start/End: Original strand, 45408247 - 45408406
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||| | |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||    
T  45408247 gttttgctagaaaacaccttttatgaaagtgtcttttagcaagttattctatgagcatttgctaaaagacacaaactaatttttatgaaggtgtctttta 45408346  T
Q  270 acaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacacc 326  Q
     |||| ||||||||||||||||||||||||||   ||||||||  |||||||||||||||    
T  45408347 ccaaaattataactaaaaagtggaaatcacaccttgaggtgtgcgttgctaaaagacacc 45408406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 4125996 - 4126150
Alignment:
Q  192 atgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtg 291  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||| || ||||||| ||||||||||| |||||||||    
T  4125996 atgaaggtgtcttttaacaagttattctatgagcatttgctaaaagacatcaattaatttttatgaatgtatcttttagcaaagttataattaaaaagtg 4126095  T
Q  292 gaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||   |||||||||||| ||||||||||||||||||| |||||||||    
T  4126096 gaaatcacaccttgaggtgtggattactaaaagacaccttcatggatggcttcta 4126150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 194 - 343
Target Start/End: Original strand, 35280433 - 35280585
Alignment:
Q  194 gaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtgga 293  Q
    |||||||||||||||||||||||| || ||||||||| ||||||| || || |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  35280433 gaaggtgtcttttagcaagttattatatgagcatttgttaaaagatacaaactaatttttatgaaggtgttttttagcaaagttataactaaaaagtgga 35280532  T
Q  294 aatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||   ||| ||||| ||||||||| ||||||||||||||||||||||    
T  35280533 aatcacaccttgagttgtgggttgctaaaacacaccttcatgggtggcttcta 35280585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 193 - 333
Target Start/End: Original strand, 11238690 - 11238833
Alignment:
Q  193 tgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtgg 292  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||| ||| |||||||||||||| ||| |||||||||||||||||||||||||| |    
T  11238690 tgaaggtgtcttttagcaagttattctatgagcatttgttaaaagacatcaactaatttttatgaagatgtattttaacaaagttataactaaaaagtag 11238789  T
Q  293 aaatcacac---gaggtgtggattgctaaaagacaccttcatgg 333  Q
    |||||||||   ||||||||| |||||||||||||| |||||||    
T  11238790 aaatcacaccttgaggtgtgggttgctaaaagacacattcatgg 11238833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 188 - 301
Target Start/End: Complemental strand, 20513172 - 20513059
Alignment:
Q  188 ttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaa 287  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20513172 ttttatgaaggtgtcttttagcaatttattctatgagcatttgttaaaagacaccaattaatttttatgaaggtgttttttaacaaagttataactaaaa 20513073  T
Q  288 agtggaaatcacac 301  Q
    ||||||||||||||    
T  20513072 agtggaaatcacac 20513059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 168 - 325
Target Start/End: Complemental strand, 35711989 - 35711831
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| || ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||||||||||||||||||    
T  35711989 gggttttgctagaagacacattttacgagggtgtcttttagcaagttattctatgagcatttgctaaaagacaccagctaacttttatgaaggtgtcttt 35711890  T
Q  268 taacaaagttataactaaaaagtggaaatcaca-cgaggtgtggattgctaaaagacac 325  Q
    || ||||| |||| |||||||||||||||||||  ||||||||| || |||||||||||    
T  35711889 tagcaaagctatagctaaaaagtggaaatcacattgaggtgtgggttactaaaagacac 35711831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 187 - 340
Target Start/End: Complemental strand, 38101331 - 38101175
Alignment:
Q  187 cttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaa 286  Q
    ||||||||||||||| |||||| ||| ||||||| || |||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  38101331 cttttatgaaggtgttttttagtaagatattctatgatcatttgctaaaagacaccaactaatttttataaaggtgtcttttagcaaagttataactaaa 38101232  T
Q  287 aagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggctt 340  Q
    |||||||||||||||   ||||||| | ||||||||| |||| |||||| |||||||    
T  38101231 aagtggaaatcacaccttgaggtgtaggttgctaaaaaacactttcatgagtggctt 38101175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 169 - 301
Target Start/End: Complemental strand, 37702730 - 37702598
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||| |||||| ||||||| |||| ||||||||||||||||||| |||   ||||||||||| ||||||||| |||||||||||||||||| ||||    
T  37702730 ggttttgctagaagacaccttttttgaaagtgtcttttagcaagttatcctattggcatttgctaatagacaccaactaatttttatgaaggtgtttttt 37702631  T
Q  269 aacaaagttataactaaaaagtggaaatcacac 301  Q
    | ||||||||||||||||||||||| |||||||    
T  37702630 agcaaagttataactaaaaagtggatatcacac 37702598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 9665320 - 9665486
Alignment:
Q  180 aagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttat 279  Q
    |||| ||||| ||||||||||||||||| ||||||||||||  | |||||| |||||||||  || ||||||||||||||||||  |||  |||||||||    
T  9665320 aagacaccttctatgaaggtgtcttttaacaagttattctattaacatttgttaaaagacattaactaatttttatgaaggtgttcttttgcaaagttat 9665419  T
Q  280 aactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||| |||||||||   ||||| ||| |||||||||||||| ||||| |||||||||||    
T  9665420 aactaaaaagtgaaaatcacacattgaggtatgggttgctaaaagacacattcataggtggcttcta 9665486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 156 - 325
Target Start/End: Complemental strand, 5232790 - 5232615
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||||| | |||| || ||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||| ||||||||||    
T  5232790 atatatatatatgggttttgctacaagacacattttatgaaggtgtcatttagcaagttattctagaagcatttgttaaaagacaccaactaatttttat 5232691  T
Q  256 gaaggtg---tcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacac 325  Q
     ||||||   ||| ||| |||||||| ||||||||||||| ||||||||    |||||||| ||||||||||||||    
T  5232690 aaaggtgtactctgttagcaaagttacaactaaaaagtgggaatcacaccttaaggtgtgggttgctaaaagacac 5232615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 19228596 - 19228695
Alignment:
Q  202 cttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac 301  Q
    |||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  19228596 cttttagcaaattattctatgagcatttgctaaaagacaccaactaatttttatgaaggtgtcttttaacaaaattataattaaaaagtgaaaatcacac 19228695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 227 - 343
Target Start/End: Original strand, 21481947 - 21482055
Alignment:
Q  227 tttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacacgaggtgtggattgctaaaagacacc 326  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  21481947 tttgctaaaagacaccagctaatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaat--------gtgtggattgctaaaagacacc 21482038  T
Q  327 ttcatgggtggcttcta 343  Q
    |||||| ||||||||||    
T  21482039 ttcatgagtggcttcta 21482055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 6125769 - 6125948
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| || |||||||||||||||||||||||||||||  ||    |||||||||||||||||||| ||||||||||||||||||||||    
T  6125769 gggttttgctagaagacacattttatgaaggtgtcttttagcaagttatcttatagacatttgctaaaagacaccaactaatttttatgaaggtgtcttt 6125868  T
Q  268 taacaaagttataact-aaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    || | ||||||||||| |||||||||| ||||||||   |||||||   ||||||||| |||||||||||| || ||||||    
T  6125869 tagc-aagttataactaaaaaagtggataatcacaccttgaggtgtaagttgctaaaaaacaccttcatggatgacttcta 6125948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 168 - 301
Target Start/End: Original strand, 36418712 - 36418845
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| |||||||||||| ||||||||||||||||||| |||    |||||| ||||||||||||| || ||||||| |||||||||||    
T  36418712 gggttttgctagaagacaccttttatgaaagtgtcttttagcaagttatcctattgacatttgttaaaagacaccaattattttttatcaaggtgtcttt 36418811  T
Q  268 taacaaagttataactaaaaagtggaaatcacac 301  Q
    || ||||||||||| ||||||||||| |||||||    
T  36418812 tagcaaagttataattaaaaagtggatatcacac 36418845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 226 - 343
Target Start/End: Complemental strand, 27038086 - 27037966
Alignment:
Q  226 atttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaaga 322  Q
    ||||| ||||||||||||| | |||||||||||||||||||||| |||| |||||||||||||||||||||||| |   |||||| || || ||||||||    
T  27038086 atttgttaaaagacaccaactcatttttatgaaggtgtcttttagcaaaattataactaaaaagtggaaatcacgccttgaggtgggggtttctaaaaga 27037987  T
Q  323 caccttcatgggtggcttcta 343  Q
    |||||||||||||||||||||    
T  27037986 caccttcatgggtggcttcta 27037966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 225 - 343
Target Start/End: Complemental strand, 27026741 - 27026620
Alignment:
Q  225 catttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaag 321  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||||| ||||   |||||| || || |||||||    
T  27026741 catttgttaaaagacaccaactaatttttaggaaggtgtcttttagcaaaattataactaaaaagtggaaattacaccttgaggtgggggtttctaaaag 27026642  T
Q  322 acaccttcatgggtggcttcta 343  Q
    |||| |||||||||||||||||    
T  27026641 acacattcatgggtggcttcta 27026620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 169 - 301
Target Start/End: Original strand, 35180573 - 35180705
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||| |||||| |  ||||||||||||||||||||  |||||||| ||  |||||||| ||||| ||| ||| |||||||||||||  ||||||||    
T  35180573 ggttttgctagaagatatattttatgaaggtgtcttttaaaaagttattttattagcatttgttaaaatacatcaattaatttttatgaaattgtctttt 35180672  T
Q  269 aacaaagttataactaaaaagtggaaatcacac 301  Q
    ||||||||||||| |||||||| ||||||||||    
T  35180673 aacaaagttataattaaaaagtagaaatcacac 35180705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 46969977 - 46969881
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||| ||   || |||||| ||||||||||||||||||||||||||||||||    
T  46969977 ttttatgaaggtgtcttttagcaaaattataactaaaaagtggaaatcataccttgatgtgtgggttgctaaaagacaccttcatgggtggcttcta 46969881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 34673625 - 34673528
Alignment:
Q  172 tttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||| ||  || ||||| ||||||||| ||| ||||||||||||||||||||||||    
T  34673625 tttgctagaagacaccttttatgaaggtgtcttttagcaagttattatattagtatttgttaaaagacatcaactaatttttatgaaggtgtctttta 34673528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 193 - 339
Target Start/End: Original strand, 52089066 - 52089216
Alignment:
Q  193 tgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtgg 292  Q
    ||||||||||||||||||||||||| ||    |||||  ||||| ||||||| |||| ||||||||||||||||||| |||  |||||||||||||||||    
T  52089066 tgaaggtgtcttttagcaagttattgtatagacatttattaaaaaacaccaactaatatttatgaaggtgtcttttagcaagtttataactaaaaagtgg 52089165  T
Q  293 a-aatcacac---gaggtgtggattgctaaaagacaccttcatgggtggct 339  Q
    | |||  |||   ||| ||||| ||||||||||||||||||||||||||||    
T  52089166 ataatatcaccttgagatgtgggttgctaaaagacaccttcatgggtggct 52089216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 53518974 - 53518908
Alignment:
Q  224 gcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagt 290  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  53518974 gcatttgttaaaagacaccaattaatttttatgaaagtgtcttttaacaaagttataactaaaaagt 53518908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 178 - 274
Target Start/End: Original strand, 27432053 - 27432150
Alignment:
Q  178 agaagaaaccttttatgaaggtgtctttt-agcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaa 274  Q
    |||||| | ||||||||||| |||||||| || ||||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||| ||||    
T  27432053 agaagacatcttttatgaagatgtctttttagtaagttattctatgggcatttactaaaagacaccaaataatttttatgaaggtgttttttagcaaa 27432150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 34673547 - 34673466
Alignment:
Q  188 ttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    |||||||||||||||||||||||||||||| ||  || ||||| ||||||||| ||| ||||||||||||||||||||||||    
T  34673547 ttttatgaaggtgtcttttagcaagttattatattagtatttgttaaaagacatcaactaatttttatgaaggtgtctttta 34673466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 189 - 290
Target Start/End: Original strand, 36227811 - 36227911
Alignment:
Q  189 tttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaa 288  Q
    |||||||| |||| ||||||||||||||  ||   || |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  36227811 tttatgaatgtgttttttagcaagttatcttataggcgtttgctaaaagacaccaattaatttttatgaaggtgtcttttagc-aagttataactaaaaa 36227909  T
Q  289 gt 290  Q
    ||    
T  36227910 gt 36227911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 39867231 - 39867131
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| ||||||||| ||||||||||||||| |||| ||| ||||||||  | |||||  |||| || ||||| ||||||||||||||||||||||    
T  39867231 gggttttgctagaagaaacattttatgaaggtgtcatttatcaaattattctataaacatttcttaaatgataccaactaatttttatgaaggtgtcttt 39867132  T
Q  268 t 268  Q
    |    
T  39867131 t 39867131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 188 - 290
Target Start/End: Original strand, 46354034 - 46354137
Alignment:
Q  188 ttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaaga-caccaaataatttttatgaaggtgtcttttaacaaagttataactaaa 286  Q
    ||||||||| |||||||||| ||||||||| ||  || ||||| ||||| | |||||| ||||||||||||| ||||||||||| ||| |||||||||||    
T  46354034 ttttatgaaagtgtcttttaacaagttattttataagtatttgttaaaaaaacaccaactaatttttatgaaagtgtcttttaataaaattataactaaa 46354133  T
Q  287 aagt 290  Q
    ||||    
T  46354134 aagt 46354137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 27027379 - 27027332
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttatt 217  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  27027379 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttatt 27027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 45408392 - 45408441
Alignment:
Q  228 ttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtta 278  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  45408392 ttgctaaaagacaccaactaatttttatgaa-gtgtcttttaacaaagtta 45408441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 51614688 - 51614592
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||| |||||||||||||  ||| |||||||||||||||  |||||||||   ||||||||||||||||||||| || ||  ||| |||||||||    
T  51614688 ttttataaaggtgtcttttagtaaaattataactaaaaagtccaaatcacacattgaggtgtggattgctaaaagaaacttttttggatggcttcta 51614592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 246 - 331
Target Start/End: Complemental strand, 27418845 - 27418759
Alignment:
Q  246 taatttttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatca-cacgaggtgtggattgctaaaagacaccttcat 331  Q
    |||||||||||||||||||||||| | |||||||||||||||||| || ||| | |  ||||||||  ||||||||||||||||||||    
T  27418845 taatttttatgaaggtgtcttttagc-aagttataactaaaaagtagataattaccttgaggtgtgagttgctaaaagacaccttcat 27418759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 4043919 - 4043973
Alignment:
Q  213 ttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    |||||||| |||||| || ||||||||||||| ||||||||||||||| ||||||    
T  4043919 ttattctatgagcatctgttaaaagacaccaactaatttttatgaaggcgtcttt 4043973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 46770495 - 46770541
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttat 216  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  46770495 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 46770541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 46770514 - 46770597
Alignment:
Q  251 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcat 331  Q
    ||||||||||||||||||| ||| |||||||||||||||| || |||||||    ||||||||||||||||||||| || |||||    
T  46770514 tttatgaaggtgtcttttagcaa-gttataactaaaaagttgataatcacaacttgaggtgtggattgctaaaagagactttcat 46770597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 19855288 - 19855321
Alignment:
Q  18 caaagaaaactaaagagaaaaaggttagacctca 51  Q
    ||||||||||||||||||||||||||||||||||    
T  19855288 caaagaaaactaaagagaaaaaggttagacctca 19855321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 21481727 - 21481777
Alignment:
Q  185 accttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaa 235  Q
    |||||| |||||| ||||||||| ||||||||||||  |||||||||||||    
T  21481727 acctttaatgaagatgtcttttatcaagttattctataagcatttgctaaa 21481777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 241 - 283
Target Start/End: Original strand, 53518868 - 53518910
Alignment:
Q  241 ccaaataatttttatgaaggtgtcttttaacaaagttataact 283  Q
    |||| |||||||||||||||||||| ||| |||||||||||||    
T  53518868 ccaactaatttttatgaaggtgtctcttagcaaagttataact 53518910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 46969995 - 46969954
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaa 211  Q
    ||||||| |||||| || ||||||||||||||||||||||||    
T  46969995 gttttgctagaagacacattttatgaaggtgtcttttagcaa 46969954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 4e-71; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 168 - 343
Target Start/End: Complemental strand, 34728381 - 34728203
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||    
T  34728381 gggttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctataagcatttgctaaaagacaccaactaatttttatgaaggtgtcttt 34728282  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    || |||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||    
T  34728281 tagcaaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttcta 34728203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 32626211 - 32626045
Alignment:
Q  180 aagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttat 279  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||    
T  32626211 aagacaccttttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaactaatttttatgaagttgtcttttagcaaagttat 32626112  T
Q  280 aactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||    
T  32626111 aactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttcta 32626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 156 - 343
Target Start/End: Complemental strand, 51682732 - 51682542
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | || |||||||| |||| | ||||||||||||||||| |||||||||||||||||| || |||||| ||||||||||||| ||||||||||    
T  51682732 atatatatatataggttttgctagaaaacaccttttatgaaggtgttttttagcaagttattctatgaacatttgttaaaagacaccaactaatttttat 51682633  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||| ||||||||||    
T  51682632 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgagtggcttcta 51682542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 51702455 - 51702633
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| |||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  51702455 gggttttgctagaagacacctcttatgaaagtgtcttttagcaagttattctatgagcatttgctaaaagaaaccaactaatttttatgaaggtgtcttt 51702554  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||  ||||||||||    
T  51702555 taacaaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcataagtggcttcta 51702633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 6137258 - 6137436
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| |||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||| ||||||||||||||||||||||    
T  6137258 gggttttgctagaagacaccttttatgaatgtgtcttttagcaagttattctattagcatttgttaaaagacaccaactaatttttatgaaggtgtcttt 6137357  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    || |||||||||||||||||||||||||||||||   ||||||||  ||||||||||||||||||||| ||||||||||    
T  6137358 tagcaaagttataactaaaaagtggaaatcacacattgaggtgtgagttgctaaaagacaccttcatgagtggcttcta 6137436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 168 - 343
Target Start/End: Complemental strand, 42434390 - 42434212
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||  |||||| |||||||| |||||||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  42434390 gggttttgttagaagacaccttttaggaaggtgttttttagcaagttattctatgagcatttgttaaaagacaccaactaatttttatgaaggtgtcttt 42434291  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    || ||||||||||||||||||||| |||||||||   |||||||||| ||||||||||||| |||||||||||||||||    
T  42434290 tagcaaagttataactaaaaagtgaaaatcacaccttgaggtgtggaatgctaaaagacactttcatgggtggcttcta 42434212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 156 - 343
Target Start/End: Complemental strand, 32090136 - 32089946
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | || |||||||| |||||| | ||||||||||||||||||||||||||||||| ||  |||||||| ||||||||||||| ||||||||||    
T  32090136 atatatatatataggttttgctagaagacatcttttatgaaggtgtcttttagcaagttattttattagcatttgttaaaagacaccaactaatttttat 32090037  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcaca---cgaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||   |||||||||| ||||||||||||| |||||||| |||||||||    
T  32090036 gaatgtgtcttttaacaaagttataactaaaaagtgaaaatcacacctcgaggtgtgggttgctaaaagacatcttcatggatggcttcta 32089946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 157 - 343
Target Start/End: Original strand, 20835694 - 20835883
Alignment:
Q  157 tatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatg 256  Q
    |||||| | ||||||||||| | |||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||||| ||||| ||| ||||| |    
T  20835694 tatatatatatgggttttgctataagacaccttttatgaaggtgtcttttagcaagttattctattagcatttgttaaaagataccaactaaattttacg 20835793  T
Q  257 aaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||| |||||||||||||||||| |||||||||| |   ||||||||| ||||||||||||||||||||||||||||||||    
T  20835794 aaggtgtcttttagcaaagttataactaaaaaatggaaatcaccccttgaggtgtgggttgctaaaagacaccttcatgggtggcttcta 20835883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 168 - 343
Target Start/End: Complemental strand, 43837851 - 43837673
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| |||||||||||||||||| ||||||||||||| |||   ||||||||||||||||||||| ||||||||||||||||||| ||    
T  43837851 gggttttgctagaagacaccttttatgaaggtgtcgtttagcaagttatcctataggcatttgctaaaagacaccaactaatttttatgaaggtgtcctt 43837752  T
Q  268 taacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    || | ||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  43837751 tagc-aagttataactaaaaagtggataatcacaccttgaggtgtggattgctaaaagacaccttcatgggtggcttcta 43837673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 20503431 - 20503609
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||  ||||||||||||||||| |||||||||| ||||||| || |||||||||||||||||||| |||||||||| |||||||||||    
T  20503431 gggttttgctagaaggcaccttttatgaaggtgttttttagcaagatattctatgatcatttgctaaaagacaccaactaatttttataaaggtgtcttt 20503530  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    || |||||||||||||||||||||||||||||||   |||| |||| ||||||||| ||||||||||| ||||||||||    
T  20503531 tagcaaagttataactaaaaagtggaaatcacaccttgaggcgtgggttgctaaaaaacaccttcatgagtggcttcta 20503609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 170 - 343
Target Start/End: Complemental strand, 34041351 - 34041175
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||||| || ||||||||| |||||||||||||||||| ||||  |||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  34041351 gttttgctagaagacacattttatgaatgtgtcttttagcaagttactctataagcatttgttaaaagacaccaagtaattttaatgaaggtgtctttta 34041252  T
Q  270 acaaagttataactaaaaagtggaaatcaca---cgaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
     ||||||||||||||||||||| ||||||||    ||||||||| |||||||||||||||||||||| |||||||||    
T  34041251 gcaaagttataactaaaaagtgaaaatcacaacttgaggtgtgggttgctaaaagacaccttcatggatggcttcta 34041175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 172 - 343
Target Start/End: Original strand, 32867987 - 32868161
Alignment:
Q  172 tttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaac 271  Q
    ||||| |||| || |||||| | || |||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||| |    
T  32867987 tttgctagaaaaagccttttgtaaatgtgtcttttaacaagttattctatgagcatttgctaaaagacaccaactaatttttatgaaggtgtgttttagc 32868086  T
Q  272 aaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||| |||||||||   |||||||||||| |||||||| |||||||||| |||||||||    
T  32868087 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggattactaaaagataccttcatggatggcttcta 32868161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 207 - 340
Target Start/End: Original strand, 27907027 - 27907163
Alignment:
Q  207 agcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---ga 303  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||    
T  27907027 agcaagttattctatgagcatttgttaaaagacaccaactaatttttatgaaggtgtcttttagcaaagttataactaaaaagtggaaatcacaccttga 27907126  T
Q  304 ggtgtggattgctaaaagacaccttcatgggtggctt 340  Q
    |||||||  ||||||||||||||||||||||||||||    
T  27907127 ggtgtgggctgctaaaagacaccttcatgggtggctt 27907163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 170 - 343
Target Start/End: Original strand, 33117514 - 33117690
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||||| ||||||||||||||||| |||||||||| ||||||| || ||||||||||||| |||||| |||||||||| |||||||||||||    
T  33117514 gttttgctagaagataccttttatgaaggtgtattttagcaagatattctatgatcatttgctaaaagtcaccaactaatttttataaaggtgtctttta 33117613  T
Q  270 acaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||||| ||  |||||    |||||||| || |||||||||||||||||| ||||||||||    
T  33117614 acaaagttataactaaaaagtgaaatgcacactttaaggtgtgggtttctaaaagacaccttcatgagtggcttcta 33117690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 13372395 - 13372548
Alignment:
Q  193 tgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtgg 292  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||    
T  13372395 tgaaggtgtcttttagcaagttattccatgagcatttgctaaaagacaccaactaatttttatgaaggtgtcttttagcaaagttataacaaaaaagtgg 13372494  T
Q  293 aaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||| ||   ||||||| | ||| ||||||||||||||||| |||| |||||    
T  13372495 aaatcataccttgaggtgtaggttgttaaaagacaccttcatgtgtggtttcta 13372548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 13382596 - 13382749
Alignment:
Q  193 tgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtgg 292  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||    
T  13382596 tgaaggtgtcttttagcaagttattccatgagcatttgctaaaagacaccaactaatttttatgaaggtgtcttttagcaaagttataacaaaaaagtgg 13382695  T
Q  293 aaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||| ||   ||||||| | ||| ||||||||||||||||| |||| |||||    
T  13382696 aaatcataccttgaggtgtaggttgttaaaagacaccttcatgtgtggtttcta 13382749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 168 - 326
Target Start/End: Original strand, 13386982 - 13387143
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| || |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  13386982 gggttttgctagaagacacattttataaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaactaatttttatgaaggtgtcttt 13387081  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacacc 326  Q
    || || |||||||||||||| ||| |||||||||   ||||||||  ||| |||||||||||    
T  13387082 tagcatagttataactaaaatgtgaaaatcacaccttgaggtgtgtgttgttaaaagacacc 13387143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 170 - 344
Target Start/End: Original strand, 19329360 - 19329537
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||| | | ||||||||||||||| ||||| ||| |||||||| || |||||| ||||||||||||| ||||||||||||||||||||||||    
T  19329360 gttttgctagaaaacatcttttatgaaggtgtattttaacaaattattctatgatcatttgttaaaagacaccaactaatttttatgaaggtgtctttta 19329459  T
Q  270 acaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttctaa 344  Q
     |||||||||||||||||||||||||||||||   ||| ||||| ||||||||||| ||||| |||| ||||||||||    
T  19329460 gcaaagttataactaaaaagtggaaatcacaccttgagatgtgggttgctaaaagagacctttatggatggcttctaa 19329537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 11020497 - 11020347
Alignment:
Q  180 aagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttat 279  Q
    |||| ||||||||||||||||| |||||||||||||||||| || |||||| ||||||| ||||| || ||||||||||||||||||||| |||||||||    
T  11020497 aagacaccttttatgaaggtgtgttttagcaagttattctatgaacatttgttaaaagataccaattattttttatgaaggtgtcttttagcaaagttat 11020398  T
Q  280 aactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacacct 327  Q
    ||||||||||||||||||||||   ||| ||||| ||||||||||||||||    
T  11020397 aactaaaaagtggaaatcacaccttgagatgtgggttgctaaaagacacct 11020347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 170 - 301
Target Start/End: Complemental strand, 38427228 - 38427097
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||| ||||||||||||||||||||||||    
T  38427228 gttttgctagaagacaccttttatgaaagtgtcttttagcaagttattctattaacatttgttaaaagacaccaactaatttttatgaaggtgtctttta 38427129  T
Q  270 acaaagttataactaaaaagtggaaatcacac 301  Q
     ||||||||||||||||||||| |||||||||    
T  38427128 gcaaagttataactaaaaagtgaaaatcacac 38427097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 191 - 301
Target Start/End: Complemental strand, 6944698 - 6944588
Alignment:
Q  191 tatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagt 290  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||    
T  6944698 tatgaaggtgtcttttagcaagttattctatgagcatttgctaaacgacaccaactaagttttatgaaggtgtcttttagcaaagttataactaaaaagt 6944599  T
Q  291 ggaaatcacac 301  Q
    |||||||||||    
T  6944598 ggaaatcacac 6944588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 344
Target Start/End: Complemental strand, 48860883 - 48860708
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||| |||||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||| |||   |||||||||||||||||    
T  48860883 ggttttgctagaagacaccttttataaaggtgtcttttagcaagttattctatgagcatttgttaaaagacaccaactaa---ttatgaaggtgtctttt 48860787  T
Q  269 aacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttctaa 344  Q
      |||||||||||||||||| ||||||||| ||   ||| |||| |||||||||| |||||||||||| || |||||||    
T  48860786 cgcaaagttataactaaaaaatggaaatcaaaccttgagatgtgaattgctaaaaaacaccttcatggatgacttctaa 48860708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 178 - 343
Target Start/End: Complemental strand, 47960446 - 47960278
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtt 277  Q
    |||||| |||||||||||||||||||||||||||||||| |||   ||||||||||||||||||||| |||||||||||||||||||||||| | |||||    
T  47960446 agaagacaccttttatgaaggtgtcttttagcaagttatcctataggcatttgctaaaagacaccaactaatttttatgaaggtgtcttttagc-aagtt 47960348  T
Q  278 ataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||| |||| |||| |||   |||||||| ||||||||||||||| ||||||| || ||||||    
T  47960347 ataactaaaaaatggataatctcaccttgaggtgtgaattgctaaaagacactttcatggatgacttcta 47960278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 156 - 296
Target Start/End: Original strand, 5975642 - 5975782
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | |||| |||||| |||||| || |||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||| ||||||||||    
T  5975642 atatatatatatggattttgctagaagacacattttatgaaggtgtcttttagcaagttattatattagcatttgttgaaagacaccaactaatttttat 5975741  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaat 296  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  5975742 gaaggtgtcttttagcaaagttataactaaaaagtgaaaat 5975782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 199 - 344
Target Start/End: Original strand, 40875241 - 40875389
Alignment:
Q  199 tgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatca 298  Q
    ||||||||| |||||  ||||| ||| ||||| | ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  40875241 tgtcttttaacaagtatttctatgagtatttgttcaaagacaccaactaatttttatgaaggtgtcttttagcaaagttataactaaaaagtgaaaatca 40875340  T
Q  299 cac---gaggtgtggattgctaaaagacaccttcatgggtggcttctaa 344  Q
     ||    |||||||| ||||||||||||||||| |||| ||||||||||    
T  40875341 aaccttaaggtgtgggttgctaaaagacacctttatggatggcttctaa 40875389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 191 - 340
Target Start/End: Complemental strand, 16467295 - 16467139
Alignment:
Q  191 tatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagt 290  Q
    ||||||||||||||||| ||||||||| || || |||||| |||||  |||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  16467295 tatgaaggtgtcttttaacaagttattatatgaacatttgttaaaaagcaccaactaatttttatgaaggtatcttttaacaaagttataactaaaaagt 16467196  T
Q  291 ggaaatcacac---gaggtg----tggattgctaaaagacaccttcatgggtggctt 340  Q
    | |||||||||   ||||||    ||||||||||||| || ||||||| ||||||||    
T  16467195 gaaaatcacaccttgaggtgtggatggattgctaaaaaacgccttcataggtggctt 16467139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 40479857 - 40480023
Alignment:
Q  180 aagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttat 279  Q
    |||| ||||||||||||  ||| |||||| || ||| || |  | |||||| ||||||||| ||| |||||||||||||||||| ||||| |||||||||    
T  40479857 aagacaccttttatgaatatgttttttagtaatttactcaattaacatttgttaaaagacatcaactaatttttatgaaggtgttttttagcaaagttat 40479956  T
Q  280 aactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||||||   |||| |||  ||||||||||||||||||||||||| ||||||    
T  40479957 aactaaaaagtggaaatcacaccttgaggcgtgagttgctaaaagacaccttcatgggtgacttcta 40480023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 190 - 340
Target Start/End: Original strand, 38962427 - 38962578
Alignment:
Q  190 ttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaag 289  Q
    |||||||||||||||||||||||| | | ||  |||||||| ||||||||||||| |||||||||| ||| ||  ||||| ||||||||||| |||||||    
T  38962427 ttatgaaggtgtcttttagcaagtcactttataagcatttgttaaaagacaccaactaatttttataaagatg--ttttagcaaagttataaataaaaag 38962524  T
Q  290 tggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggctt 340  Q
    || |||||||||   ||||||||| ||| ||||| ||||||||||||| |||||    
T  38962525 tgaaaatcacaccttgaggtgtgggttgttaaaaaacaccttcatgggaggctt 38962578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 28589320 - 28589220
Alignment:
Q  246 taatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttct 342  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||   ||||| ||||||| |||||||||||||||||||||||||||    
T  28589320 taatttttatgaagatgttttttagcaaagttataactaaaaagtgaaaatcacaccttgaggtatggattgttaaaagacaccttcatgggtggcttct 28589221  T
Q  343 a 343  Q
    |    
T  28589220 a 28589220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 169 - 328
Target Start/End: Original strand, 13387863 - 13388024
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||| ||| || || |||||||| |||||||||||||||||||| |||    |||||| |||||||||||||  ||||||||| |||||| |||||    
T  13387863 ggttttgctagatgacacattttatga-ggtgtcttttagcaagttatcctattgacatttgttaaaagacaccaacaaatttttataaaggtgcctttt 13387961  T
Q  269 aacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacacctt 328  Q
    | |||| |||||||||||||||||| |||||||   ||||| ||  |||||||||||||||||    
T  13387962 agcaaaattataactaaaaagtggatatcacaccttgaggtatgacttgctaaaagacacctt 13388024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 172 - 300
Target Start/End: Original strand, 52719062 - 52719192
Alignment:
Q  172 tttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaag--gtgtctttta 269  Q
    ||||| |||||| || ||||||||||||||  |||| ||| ||||||||  |||||||| ||||||||| ||| ||||||||| ||||  ||||||||||    
T  52719062 tttgctagaagacacattttatgaaggtgttctttaacaaattattctattagcatttgttaaaagacatcaactaatttttacgaaggtgtgtctttta 52719161  T
Q  270 acaaagttataactaaaaagtggaaatcaca 300  Q
    ||||| |||||||||||||||| ||||||||    
T  52719162 acaaaattataactaaaaagtgaaaatcaca 52719192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 170 - 336
Target Start/End: Original strand, 52344494 - 52344664
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||||| || ||||||||| || || ||||  | |||||||||  |||||||| ||||||||||||| |||| |||||||| ||||||||||    
T  52344494 gttttgctagaagacacattttatgaatgtatcatttaatatgttattctataagcatttgttaaaagacaccaactaatatttatgaatgtgtctttta 52344593  T
Q  270 acaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcatgggtg 336  Q
     |||  |||||| |||||||||||  ||| |||   ||||||||| ||||||||||||||| |||||||||    
T  52344594 gcaagtttataattaaaaagtggatgatctcaccttgaggtgtgggttgctaaaagacaccatcatgggtg 52344664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 188 - 286
Target Start/End: Original strand, 28755403 - 28755504
Alignment:
Q  188 ttttatgaaggtgtcttttagcaagttattct---acgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataacta 284  Q
    |||||||||||||||||||| ||||||||| |   | ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||| |||||||||    
T  28755403 ttttatgaaggtgtcttttaacaagttattattttatgagcatttgttaaaagacaccaattaatttttatgaagttgtcttttaataaaattataacta 28755502  T
Q  285 aa 286  Q
    ||    
T  28755503 aa 28755504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 38963400 - 38963329
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacacc 242  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  38963400 ttttgctagaagacaccttttatgaatgtgtcttttagcaagttattctatgagcatttgctaaaagacacc 38963329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 225 - 330
Target Start/End: Complemental strand, 53773790 - 53773681
Alignment:
Q  225 catttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaa 320  Q
    ||||||||| |||||||||| |||||||||||| |||||||||| |  |||||||||||||||||| || ||||||||   || |||| |||||||||||    
T  53773790 catttgctagaagacaccaactaatttttatgatggtgtctttttagcaagttataactaaaaagttgataatcacaccttgaagtgttgattgctaaaa 53773691  T
Q  321 gacaccttca 330  Q
    ||||||||||    
T  53773690 gacaccttca 53773681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 7645961 - 7645865
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||| ||||||| ||||||||||||||||||||| |||||||||   |||  |||| |||||||||||||| ||||| |||||||||||    
T  7645961 ttttatgaaggtatcttttagcaaagttataactaaaaagtgaaaatcacaccttgagccgtgggttgctaaaagacacattcattggtggcttcta 7645865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 22254219 - 22254297
Alignment:
Q  166 atgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaa 244  Q
    ||||||||||| |||||| |  |||||||||||||||||||||||||||||||||   ||||||| |||||||||||||    
T  22254219 atgggttttgctagaagacattttttatgaaggtgtcttttagcaagttattctattggcatttgttaaaagacaccaa 22254297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 54158115 - 54158163
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttat 216  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  54158115 gggttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 54158163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 38792347 - 38792250
Alignment:
Q  249 tttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||| ||||| ||||||| ||||||||||||||||| |||||||| ||||   ||| | ||| ||||||||| ||||||| || | |||||||||    
T  38792347 tttttataaaggtatcttttagcaaagttataactaaaaggtggaaattacaccttgagatatgggttgctaaaaaacacctttattgatggcttcta 38792250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 42560205 - 42560130
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaaga 322  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||| ||||||||    || |||||||||||||||||    
T  42560205 ttttatgaagatgtattttaacaa-gttataactaaaaagtggataatcacactttaagctgtggattgctaaaaga 42560130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 15725404 - 15725363
Alignment:
Q  249 tttttatgaaggtgtcttttaacaaagttataactaaaaagt 290  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||    
T  15725404 tttttattaaggtgtgttttaacaaagatataactaaaaagt 15725363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 1e-68; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 156 - 343
Target Start/End: Complemental strand, 29471801 - 29471611
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | || |||||||| |||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||||||    
T  29471801 atatatatatataggttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgaacatttgctaaaagacacaaactaatttttat 29471702  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||    
T  29471701 gaaggtgtcttttagcaaagttataactaaaaagtggaaatcactccttgaggtgtggattgctaaaagacaccttcatgggtggcttcta 29471611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 156 - 343
Target Start/End: Complemental strand, 9548377 - 9548187
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||||| | |||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  9548377 atatatatatatgggttttgctataagacatcttttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaactaatttttat 9548278  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcaca---cgaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||| | ||||||||||||||||||||||||||||    ||||||||| ||||||||||||||||||||||||||||||||    
T  9548277 gaaggtgtcttttagcgaagttataactaaaaagtggaaatcacatcttgaggtgtgggttgctaaaagacaccttcatgggtggcttcta 9548187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 170 - 344
Target Start/End: Complemental strand, 12725870 - 12725693
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||||| ||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  12725870 gttttgctagaagacaccttttataaagatgtcttttagcaagttattctatgagcatttactaaaagacaccaactaatttttatgaaggtgtctttta 12725771  T
Q  270 acaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttctaa 344  Q
     |||||||||||||||||||||||||||||||   |||||||||  ||||||||||||||||||||||||||||||||    
T  12725770 gcaaagttataactaaaaagtggaaatcacactttgaggtgtggcctgctaaaagacaccttcatgggtggcttctaa 12725693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 157 - 343
Target Start/End: Complemental strand, 18924705 - 18924516
Alignment:
Q  157 tatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatg 256  Q
    |||||| | ||| ||||||| |||||| |||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||| |||||||||||    
T  18924705 tatatatatatgagttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgaacatttgttaaaagacaccaactaatttttatg 18924606  T
Q  257 aaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||| |||| |||||||||||||||||||||||||||||||   ||||| ||| ||||||||||||||||||||||||||||||||    
T  18924605 aaggtgtcctttagcaaagttataactaaaaagtggaaatcacaccttgaggtatgggttgctaaaagacaccttcatgggtggcttcta 18924516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 171 - 340
Target Start/End: Complemental strand, 10664843 - 10664671
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaa 270  Q
    |||||| | |||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||     
T  10664843 ttttgctataagacacattttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaactaatttttatgaaggcgtcttttag 10664744  T
Q  271 caaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggctt 340  Q
    |||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||||||| ||||||||    
T  10664743 caaagttataactaaaaagtggaaatcacaccttgaggtgtgggttactaaaagacaccttcatcggtggctt 10664671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 156 - 343
Target Start/End: Original strand, 24314201 - 24314392
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||||| | || | ||||||||| ||||||||||||||||| ||||| || ||||||||| ||||||||||||| ||||||||||    
T  24314201 atatatatatatgggttttgctaaaatacaccttttataaaggtgtcttttagcaaattattttatgagcatttgttaaaagacaccaactaatttttat 24314300  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatggg-tggcttcta 343  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||   |||||||| |||||||||||||||||||||||| |||||||||    
T  24314301 gaaggtgtcttttagcaaagttataactaaaatgtggaaatcacaccttgaggtgtgaattgctaaaagacaccttcatgggatggcttcta 24314392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 169 - 340
Target Start/End: Complemental strand, 1750072 - 1749896
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||| |||||| || ||||||||||||||||||||||| |||||||||  |||||||| ||||||||||||| |||||||||||||||||||||||    
T  1750072 ggttttgctagaagacacattttatgaaggtgtcttttagcaggttattctattagcatttgttaaaagacaccaactaatttttatgaaggtgtctttt 1749973  T
Q  269 aacaaagttataactaaaaagtggaaatcacac---gaggtgtg--gattgctaaaagacaccttcatgggtggctt 340  Q
    | |||| ||||||||||||||||||||| ||||   ||||||||  | ||||||||| |||||||||||| ||||||    
T  1749972 agcaaaattataactaaaaagtggaaattacaccttgaggtgtgtaggttgctaaaaaacaccttcatggatggctt 1749896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 187 - 343
Target Start/End: Original strand, 21950657 - 21950816
Alignment:
Q  187 cttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaa 286  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| |||||||| |||||||||| ||||||||||||||||    
T  21950657 cttttatgaaggtgtcttttagcaagttattctatgagcatttgttaaaaaacaccaactaatatttatgaatgtgtcttttagcaaagttataactaaa 21950756  T
Q  287 aagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||| |||||| ||   ||||||||| |||||||||||||| ||||||| || ||||||    
T  21950757 aagtgaaaatcataccttgaggtgtgggttgctaaaagacactttcatggatgacttcta 21950816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 169 - 332
Target Start/End: Complemental strand, 39089257 - 39089091
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||  |||||| |||||||||||| |||||||||| ||||||||||||  | |||||| ||||||||||||| |||||||||||||| ||||||||    
T  39089257 ggttttgttagaagacaccttttatgaatgtgtcttttaacaagttattctattaacatttgttaaaagacaccaactaatttttatgaagatgtctttt 39089158  T
Q  269 aacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatg 332  Q
    | |||||||||||||||||| ||||||||| ||   ||||||||||||||||||| |||||||||||    
T  39089157 agcaaagttataactaaaaaatggaaatcataccttgaggtgtggattgctaaaaaacaccttcatg 39089091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 170 - 343
Target Start/End: Original strand, 42090415 - 42090591
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    |||||||  ||||| |||||||||||| |||||||||||||| |||||||| || |||||| ||||||||||||| ||||||||||||||||||||||||    
T  42090415 gttttgctggaagacaccttttatgaaagtgtcttttagcaaattattctatgaacatttgttaaaagacaccaactaatttttatgaaggtgtctttta 42090514  T
Q  270 acaaagttataactaaaaagtggaaatcaca---cgaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
     |||||||||||||||||| || ||||||||     ||||||||||||  ||||||||| |||||| ||||| ||||    
T  42090515 gcaaagttataactaaaaaatgaaaatcacatcttaaggtgtggattgtgaaaagacactttcatgagtggcctcta 42090591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 213 - 343
Target Start/End: Original strand, 12895372 - 12895504
Alignment:
Q  213 ttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcaca---cgaggtgtg 309  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| ||||||||    ||||||||    
T  12895372 ttattctatgagcatttgttaaaagacaccaactaatttttatgaaggtgtcttttaacaatgctataactaaaaagtgaaaatcacatcttgaggtgtg 12895471  T
Q  310 gattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||||| |||||||||||    
T  12895472 gattgctaaaagacaccttcat-ggtggcttcta 12895504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 166 - 343
Target Start/End: Complemental strand, 16719884 - 16719703
Alignment:
Q  166 atgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtct 265  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| |||||||| | ||  ||||| |||||||||| || ||||||||||||||||||||    
T  16719884 atgggttttgctagaagacaccttttatgaaggtgtcttttagctagttattccatgaatatttgttaaaagacacaaactaatttttatgaaggtgtct 16719785  T
Q  266 tttaacaaagttataact-aaaaagtggaaatcaca---cgaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||  |||||||| ||| ||||| |  ||||||||    ||| |||| |||||||||||||| ||||||||||||| ||||    
T  16719784 tttagtaaagttatcactaaaaaaataaaaatcacagcctgagatgtgaattgctaaaagacatcttcatgggtggcctcta 16719703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 250 - 343
Target Start/End: Original strand, 10862595 - 10862691
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||    
T  10862595 ttttatgaaggtgtcttttagcaaaattataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttcta 10862691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 156 - 301
Target Start/End: Original strand, 33740221 - 33740366
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||| | |||||| |||||||||||||||||||||||||||||||| |||    |||||  ||||||||||||| ||||||||||    
T  33740221 atatatatatatgggttttactagaagacaccttttatgaaggtgtcttttagcaagttatcctattgacatttcttaaaagacaccaactaatttttat 33740320  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac 301  Q
     || |||||||||| |||||||||||||| |||||| | |||||||    
T  33740321 aaatgtgtcttttagcaaagttataactagaaagtgaatatcacac 33740366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 250 - 343
Target Start/End: Original strand, 34450334 - 34450430
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||   ||||||||| |||||||||||||||||||||| |||||||||    
T  34450334 ttttatgaaggtgtcttttagcaaagttataaataaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttcta 34450430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 178 - 301
Target Start/End: Complemental strand, 44539989 - 44539865
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattct-acgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagt 276  Q
    |||||| | |||||||||||||||| |||||||||||||||| |   ||||||| ||||||| ||||| |||||||||||||||||| ||||| ||||||    
T  44539989 agaagacatcttttatgaaggtgtcatttagcaagttattcttattggcatttgttaaaagataccaactaatttttatgaaggtgtattttagcaaagt 44539890  T
Q  277 tataactaaaaagtggaaatcacac 301  Q
    |||||||||||| |||| |||||||    
T  44539889 tataactaaaaaatggatatcacac 44539865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 157 - 325
Target Start/End: Original strand, 4206417 - 4206591
Alignment:
Q  157 tatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgag---catttgctaaaagacaccaaataattttt 253  Q
    |||||| | ||| ||||||| |||||| || ||||||||||||||||||||||||||||| || | |    |||||||||| ||| ||||| ||||||||    
T  4206417 tatatatatatgagttttgctagaagacacattttatgaaggtgtcttttagcaagttatcctcctattgacatttgctaacagaaaccaactaattttt 4206516  T
Q  254 atgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacac 325  Q
    ||||| |||||||||| | ||||||||||||||||||||| ||||||||    |||||||| ||||||||||||||    
T  4206517 atgaatgtgtcttttagc-aagttataactaaaaagtggataatcacaccttaaggtgtggcttgctaaaagacac 4206591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 250 - 343
Target Start/End: Original strand, 27097052 - 27097148
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||  ||||  ||||||||||||||||||||||||||||||   ||||||||| |||| |||||||||||||||||||||||||||    
T  27097052 ttttatgaaggtgttatttaggaaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgccaaaagacaccttcatgggtggcttcta 27097148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 170 - 333
Target Start/End: Complemental strand, 39961691 - 39961525
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgag-catttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    ||||||| |||||| || |||||||||||||||||||| |||||||| ||   || |||||| ||||||| || || ||||||| | |||||||||||||    
T  39961691 gttttgctagaagatacattttatgaaggtgtcttttaacaagttat-ctcatagacatttgttaaaagatacaaactaattttcacgaaggtgtctttt 39961593  T
Q  269 aacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcatgg 333  Q
    | |||| ||||||||||||||| || ||||| ||   ||||||||||||||||||||||||||||||||    
T  39961592 atcaaa-ttataactaaaaagttgataatcatactttgaggtgtggattgctaaaagacaccttcatgg 39961525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 169 - 324
Target Start/End: Original strand, 25880575 - 25880737
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcattt----gctaaaagacaccaaataatttttatgaaggtgtc 264  Q
    |||||||| |||||| || |||||||||||||| ||||||||||||||  ||  | |||||    ||||||||  | ||| ||||||||||||||||||     
T  25880575 ggttttgctagaagacactttttatgaaggtgttttttagcaagttatcatataaacatttatttgctaaaagctatcaactaatttttatgaaggtgtt 25880674  T
Q  265 ttttaacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagaca 324  Q
    ||||||| |||||||||||||||||| || ||||||||   ||||||||||||||| |||||||    
T  25880675 ttttaac-aagttataactaaaaagttgataatcacactttgaggtgtggattgctgaaagaca 25880737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 222 - 343
Target Start/End: Complemental strand, 5534390 - 5534266
Alignment:
Q  222 gagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcaca---cgaggtgtggattgctaa 318  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | ||||| ||||||||||| |||||||| |||||||||    |||||||||||| ||||    
T  5534390 gagcatttgttaaaaaataccaattaatttttatgaaggtattttttagcaaagttataattaaaaagttgaaatcacatcttgaggtgtggattactaa 5534291  T
Q  319 aagacaccttcatgggtggcttcta 343  Q
    || | |||||||||| || ||||||    
T  5534290 aaaataccttcatggatgacttcta 5534266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 197 - 329
Target Start/End: Complemental strand, 34125674 - 34125539
Alignment:
Q  197 ggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aa 295  Q
    ||||||||||||||||||||  ||   ||||||| ||||  ||||||| ||||||||||||| |||||||||| |||  | ||||||||||||| || ||    
T  34125674 ggtgtcttttagcaagttatcatataggcatttgttaaattacaccaagtaatttttatgaatgtgtcttttagcaacct-ataactaaaaagttgataa 34125576  T
Q  296 tcacac---gaggtgtggattgctaaaagacaccttc 329  Q
    ||||||   ||||||||||||||||||||||||||||    
T  34125575 tcacaccttgaggtgtggattgctaaaagacaccttc 34125539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 36779879 - 36779781
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataact--aaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||| ||||||| |||||  ||||||||||||||||||   ||||||| ||||||||||||||| |||||||  |||||||||    
T  36779879 ttttatgaaggtgtcttttagcaaagttttaactaaaaaaagtggaaatcacacattgaggtgtagattgctaaaagacaacttcatgtatggcttcta 36779781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 2969746 - 2969678
Alignment:
Q  225 catttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtgga 293  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  2969746 catttgttaaaagataccaactaatttttatgaaggtgtcttttagcaaagttataactaaaaggtgga 2969678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 25810559 - 25810479
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataat 249  Q
    |||||||| |||||| ||||||||||||||||| ||||||||||||||| ||  | |||||| ||||||||||||| ||||    
T  25810559 ggttttgctagaagataccttttatgaaggtgttttttagcaagttattatattatcatttgttaaaagacaccaactaat 25810479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 6231240 - 6231290
Alignment:
Q  251 tttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac 301  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  6231240 tttatgaaggtgtcttttagcaaagttataactaaaaagtgaaaatcacac 6231290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 27175545 - 27175465
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacacct 327  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| ||||||||   ||||||| | ||||||||||||||||    
T  27175545 ttttatgaaggtgtcttttagcaa-gttataactaaaaagtggataatcacaccttgaggtgttgcttgctaaaagacacct 27175465  T

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Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 39435084 - 39434985
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||||| |||||||||||| |||||||||| |||||| | |||    |||||| ||||| |||| || |||||||||||||| |||||||||    
T  39435084 gttttgctagaagacaccttttatgaaagtgtcttttaacaagttttcctatagacatttgttaaaatacactaactaatttttatgaagatgtctttta 39434985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 302 - 343
Target Start/End: Original strand, 39830678 - 39830719
Alignment:
Q  302 gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  39830678 gaggtgtgggttgctaaaagacaccttcatgggtggcttcta 39830719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 2969625 - 2969673
Alignment:
Q  235 aagacaccaaataatttttatgaaggtgtcttttaacaaagttataact 283  Q
    |||||||| | |||||||||||||||||||||||| |||||||||||||    
T  2969625 aagacacccactaatttttatgaaggtgtcttttagcaaagttataact 2969673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 250 - 337
Target Start/End: Complemental strand, 14747431 - 14747341
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtgg 337  Q
    |||||||||||||||||||  |||| |||||| |||||| || |||||||||    |||||||| ||||||||||||||||| || |||||    
T  14747431 ttttatgaaggtgtcttttggcaaaattataattaaaaaatgaaaatcacaccttaaggtgtgggttgctaaaagacacctttataggtgg 14747341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 10862575 - 10862618
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaa 211  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  10862575 gggttttgctagaagacaccttttatgaaggtgtcttttagcaa 10862618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 29511911 - 29511868
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtgga 293  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  29511911 ttttatgaaggtgtcttttagcaaaattataactaaaaagtgga 29511868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 6231207 - 6231262
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaa 211  Q
    ||||||| | ||| ||||||| |||||| ||| |||||||||||||||||||||||    
T  6231207 atatatatatatgagttttgctagaagacaccatttatgaaggtgtcttttagcaa 6231262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 14747463 - 14747408
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaa 211  Q
    ||||||| | ||||||||||| |||||| | |||||||||||||||||||| ||||    
T  14747463 atatatatatatgggttttgctagaagacatcttttatgaaggtgtcttttggcaa 14747408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 27175560 - 27175517
Alignment:
Q  173 ttgcgagaagaaaccttttatgaaggtgtcttttagcaagttat 216  Q
    |||| |||||| || |||||||||||||||||||||||||||||    
T  27175560 ttgctagaagacacattttatgaaggtgtcttttagcaagttat 27175517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 29511943 - 29511888
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaa 211  Q
    ||||||| | ||||||||||| |||| | || ||||||||||||||||||||||||    
T  29511943 atatatatatatgggttttgctagaaaacacattttatgaaggtgtcttttagcaa 29511888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 36779911 - 36779856
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaa 211  Q
    ||||||| | ||| ||||| | |||||| |||||||||||||||||||||||||||    
T  36779911 atatatatatatgagttttcctagaagacaccttttatgaaggtgtcttttagcaa 36779856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 23387350 - 23387309
Alignment:
Q  249 tttttatgaaggtgtcttttaacaaagttataactaaaaagt 290  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||    
T  23387350 tttttattaaggtgtgttttaacaaagatataactaaaaagt 23387309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 27097020 - 27097065
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgt 201  Q
    ||||||| | ||||||||||| |||||| |||||||||||||||||    
T  27097020 atatatatatatgggttttgctagaagacaccttttatgaaggtgt 27097065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 4e-65; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 156 - 343
Target Start/End: Original strand, 10078291 - 10078478
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  10078291 atatatatatatgggttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaactaatttttat 10078390  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||| |||||   |||||||||||||||||||||||   ||||||||| |||||||||||||||||| |||||||||||||    
T  10078391 gaaggtgtcttttagcaaag---taactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcttgggtggcttcta 10078478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 178 - 343
Target Start/End: Complemental strand, 16930952 - 16930784
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtt 277  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||| |||| ||||| |||||||    
T  16930952 agaagataccttttatgaaggtgtcttttagcaagttattctatgagcattttttaaaagacaccaactaatttttatgaaagtgttttttagcaaagtt 16930853  T
Q  278 ataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| ||||||    
T  16930852 ataactaaaaagtggaaatcacaccttgaggtgtggattgctaaaagacaccttcatgggtgacttcta 16930784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 156 - 343
Target Start/End: Original strand, 30774112 - 30774302
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  30774112 atatatatatatgggttttgctagaagacaccttttatgaaggtgttttttagcaagttattctatgagcatttgctaaaagataccaactaatttttat 30774211  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||| || |||||||||| |||||||||||||||||||||||||    |||||||| |||||||||||||||||| || ||||||||||    
T  30774212 gaaggtatcctttaacaaaggtataactaaaaagtggaaatcacaccttaaggtgtgggttgctaaaagacaccttcgtgagtggcttcta 30774302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 166 - 340
Target Start/End: Complemental strand, 26912482 - 26912306
Alignment:
Q  166 atgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtct 265  Q
    ||||||||||| |||||| || ||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  26912482 atgggttttgctagaagacacattttatgaatgtgtcttttaacaagttattctatgagcatttgctaaaagacaccaactaatttttatgaaggtgtct 26912383  T
Q  266 tttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggctt 340  Q
    |||| ||||||||||||| ||||||| |||||||||   ||||||||| ||||||||| |||||||||||||||||||    
T  26912382 tttagcaaagttataactgaaaagtgaaaatcacaccttgaggtgtgggttgctaaaa-acaccttcatgggtggctt 26912306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 168 - 341
Target Start/End: Original strand, 23472513 - 23472688
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  23472513 gggttttgctagaagacaccttttatgaaggtgtcttttagca-gttattctatgaggatttgctaaaagataccaactaatttttatgaaggtgtcttt 23472611  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttc 341  Q
    || |||||||||||||||||||||||||||||||   ||| ||| ||||||||||||||||||| ||| ||||||||    
T  23472612 tagcaaagttataactaaaaagtggaaatcacaccttgagttgtagattgctaaaagacaccttaatgagtggcttc 23472688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 156 - 300
Target Start/End: Original strand, 9479401 - 9479545
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||||  |||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||    
T  9479401 atatatatatatgggttttgttagaagacacattttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacacaaactaatttttat 9479500  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcaca 300  Q
    ||| |||||||||||||||||||||||||||||||||||||||||    
T  9479501 gaaagtgtcttttaacaaagttataactaaaaagtggaaatcaca 9479545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 169 - 343
Target Start/End: Original strand, 9478711 - 9478888
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||  |||||| |||||| |||||  ||| ||||||||||||||||||  | |||||| ||||||||||||| |||||||||||||||||||||||    
T  9478711 ggttttgttagaagacacctttaatgaaaatgttttttagcaagttattctattaacatttgttaaaagacaccaactaatttttatgaaggtgtctttt 9478810  T
Q  269 aacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||||||||||||||||   ||||||||| ||||||||||| | ||||||||||||||||||    
T  9478811 aacaaagttataactaaaaagtggaaatcacactttgaggtgtgggttgctaaaagatatcttcatgggtggcttcta 9478888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 178 - 343
Target Start/End: Original strand, 44873921 - 44874090
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtt 277  Q
    |||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||    
T  44873921 agaagacaccttttatgaaggtgttttttagcaagttattctatgagcatttgctaaaagacaccagctaatttttatgaaggtgtcttttagcaaagtt 44874020  T
Q  278 ataactaa-aaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||| |||  |||||||||||| ||     ||||||||||||||||||||||||||||||||||||||||    
T  44874021 ataattaatgaagtggaaatcaaaccttagggtgtggattgctaaaagacaccttcatgggtggcttcta 44874090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 156 - 340
Target Start/End: Complemental strand, 22812491 - 22812305
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | |||| |||||| |||||| || |||||| | ||| |||||||||| ||||||||| ||||||||| ||||||||||||| ||||||||||    
T  22812491 atatatatatatggattttgctagaagacacattttatta-ggtatcttttagcacgttattctatgagcatttgttaaaagacaccaactaatttttat 22812393  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcaca---cgaggtgtggattgctaaaagacaccttcatgggtggctt 340  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    ||||||||| |||||||||| ||||||||||||||||||    
T  22812392 gaaggtgtcttttaacaaagttataactaaaaagtgaaaatcacatcttgaggtgtgggttgctaaaaggcaccttcatgggtggctt 22812305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 168 - 343
Target Start/End: Complemental strand, 33568226 - 33568048
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||  |||||| || |||||| ||||||||||||| |||||||||||| ||||||||| ||||||||||||| || |||||||||||||||||||    
T  33568226 gggttttgttagaagacacattttataaaggtgtcttttatcaagttattctatgagcatttgttaaaagacaccaactagtttttatgaaggtgtcttt 33568127  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    || |||||||||||||||||| |  |||||||||   ||||||||||||||||||| ||||||||||||||| ||||||    
T  33568126 tagcaaagttataactaaaaaataaaaatcacaccttgaggtgtggattgctaaaaaacaccttcatgggtgacttcta 33568048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 169 - 301
Target Start/End: Complemental strand, 38498407 - 38498275
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| |||||||||||||||||||||||    
T  38498407 ggttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctattaacatttgttaaaagacaccaattaatttttatgaaggtgtctttt 38498308  T
Q  269 aacaaagttataactaaaaagtggaaatcacac 301  Q
    | |||||||||||||||||||||||||||||||    
T  38498307 agcaaagttataactaaaaagtggaaatcacac 38498275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 178 - 301
Target Start/End: Complemental strand, 39077431 - 39077308
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtt 277  Q
    |||||| |||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  39077431 agaagacaccttttatgaaggtgtcttttagcaagttattctatgaacatttgttaaaagacaccaactaatttttatgaaggtgtcttttagcaaagtt 39077332  T
Q  278 ataactaaaaagtggaaatcacac 301  Q
    ||||||||||||||||||||||||    
T  39077331 ataactaaaaagtggaaatcacac 39077308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 156 - 333
Target Start/End: Original strand, 42806196 - 42806378
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctac--gagcatttgctaaaagacaccaaataattttt 253  Q
    ||||||| | ||| ||||||| |||||| ||||||||||||| ||||||||||||| ||||| ||   ||||||||| || ||||||| || ||||||||    
T  42806196 atatatatatatgagttttgctagaagacaccttttatgaagatgtcttttagcaaattattttatatgagcatttgttagaagacacaaactaattttt 42806295  T
Q  254 atgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgg 333  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||    
T  42806296 atgaaggtgtcttttagcaaagttataactaaaaagtggaaatcacaccttgaggtgtggattgctaaaagacactttcatgg 42806378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 28539162 - 28539340
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||  |||||| || |||||||||  ||||||||||||||||||| || ||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  28539162 gggttttgttagaagacacattttatgaatatgtcttttagcaagttattttatgagcatttgttaaaagataccaactaatttttatgaaggtgtcttt 28539261  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    || ||||||||||||||||||||| |||||| ||   ||| ||||| |||||||||||||||||||| |||||||||||    
T  28539262 tagcaaagttataactaaaaagtgaaaatcaaacattgagatgtgggttgctaaaagacaccttcataggtggcttcta 28539340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 12176364 - 12176193
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| ||||||||||||||||| |||||||||||||| |||   ||| |||||||||||||||||||||||||||| |||||||||||    
T  12176364 gggttttgctagaagacaccttttatgaaggtgtgttttagcaagttatcctataggcaattgctaaaagacaccaaataatttttatcaaggtgtcttt 12176265  T
Q  268 taacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcatgggtg 336  Q
    || | | |||||||||||||||| || ||||||||   |||||||||||||||||||||||||||||||||||    
T  12176264 tagc-aggttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaagacaccttcatgggtg 12176193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 12420792 - 12420621
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| ||||||||||||||||| |||||||||||||| |||   ||| |||||||||||||||||||||||||||| |||||||||||    
T  12420792 gggttttgctagaagacaccttttatgaaggtgtgttttagcaagttatcctataggcaattgctaaaagacaccaaataatttttatcaaggtgtcttt 12420693  T
Q  268 taacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcatgggtg 336  Q
    || | | |||||||||||||||| || ||||||||   |||||||||||||||||||||||||||||||||||    
T  12420692 tagc-aggttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaagacaccttcatgggtg 12420621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 171 - 343
Target Start/End: Complemental strand, 12295321 - 12295139
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaa 270  Q
    |||||| | |||| |||||||||||| |||||||||||||||||||||||  |||||||| ||||||| ||||| ||| ||||||||||||||||||||     
T  12295321 ttttgctataagacaccttttatgaatgtgtcttttagcaagttattctattagcatttgttaaaagataccaattaaattttatgaaggtgtcttttag 12295222  T
Q  271 caaagttataactaaaaagtggaaatcacac----------gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||||||||||||||          | ||||||| ||||||||||||||||||||||||| ||||||    
T  12295221 caaagttataactaaaaagtggaaatcacaccttgaggtgtggggtgtgggttgctaaaagacaccttcatgggtgacttcta 12295139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 222 - 343
Target Start/End: Original strand, 19922563 - 19922687
Alignment:
Q  222 gagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaa 318  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||   ||||||||| |||||||    
T  19922563 gagcatttgttaaaagacaccaattaatttttatgaaggtgtcttttagcaaagttataactaaaaggtggaaatcacaccttgaggtgtgggttgctaa 19922662  T
Q  319 aagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||||||||    
T  19922663 aagacaccttcatgggtggcttcta 19922687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 191 - 331
Target Start/End: Complemental strand, 14916797 - 14916654
Alignment:
Q  191 tatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagt 290  Q
    |||||| |||| |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  14916797 tatgaatgtgttttttagcaagttattctatgagcatttgctaaaagataccaactaatttttatgaaggtatcttttaacaaagttataacaaaaaagt 14916698  T
Q  291 ggaaatcacac---gaggtgtggattgctaaaagacaccttcat 331  Q
    | |||||||||    |||||||  ||||||||||||||||||||    
T  14916697 gaaaatcacaccttaaggtgtgagttgctaaaagacaccttcat 14916654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 193 - 328
Target Start/End: Complemental strand, 28969233 - 28969095
Alignment:
Q  193 tgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtgg 292  Q
    ||||||||| ||||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  28969233 tgaaggtgttttttagcaatttattctatgagcatttgttaaaagacaccaattaatttttatgaaagtatcttttaacaaagttataactaaaaagtgg 28969134  T
Q  293 aaatcacac---gaggtgtggattgctaaaagacacctt 328  Q
    |||||||||   || |||||| ||||||||| |||||||    
T  28969133 aaatcacaccttgaagtgtgggttgctaaaatacacctt 28969095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 170 - 301
Target Start/End: Original strand, 5224300 - 5224430
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| | |||| || |||||||||||||||||||| |||||||||||| || |||||| ||||||||||||| |||||||||||||||||| |||||    
T  5224300 gttttgctataagacactttttatgaaggtgtcttttaacaagttattctatgaacatttgttaaaagacaccaactaatttttatgaaggtgt-tttta 5224398  T
Q  270 acaaagttataactaaaaagtggaaatcacac 301  Q
     |||||||||||||||||||||||||||||||    
T  5224399 gcaaagttataactaaaaagtggaaatcacac 5224430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 195 - 336
Target Start/End: Complemental strand, 254081 - 253937
Alignment:
Q  195 aaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaa 294  Q
    ||||||||||||| |||||||||||| || |||||| ||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||| ||    
T  254081 aaggtgtcttttaacaagttattctatgaacatttgttaaaagacaccaactaatttttaggaaagtgtcttttagcaaagttataactaaaaagtgaaa 253982  T
Q  295 atcacac---gaggtgtggattgctaaaagacaccttcatgggtg 336  Q
    |||||||   ||||||| | |||||||||||||||||||| ||||    
T  253981 atcacaccttgaggtgtaggttgctaaaagacaccttcataggtg 253937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 195 - 336
Target Start/End: Original strand, 661777 - 661921
Alignment:
Q  195 aaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaa 294  Q
    ||||||||||||| |||||||||||| || |||||| ||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||| ||    
T  661777 aaggtgtcttttaacaagttattctatgaacatttgttaaaagacaccaactaatttttaggaaagtgtcttttagcaaagttataactaaaaagtgaaa 661876  T
Q  295 atcacac---gaggtgtggattgctaaaagacaccttcatgggtg 336  Q
    |||||||   ||||||| | |||||||||||||||||||| ||||    
T  661877 atcacaccttgaggtgtaggttgctaaaagacaccttcataggtg 661921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 170 - 343
Target Start/End: Original strand, 16784331 - 16784499
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||| ||  | |||||| ||||||||||||| |||||||||||||||       ||    
T  16784331 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattatattaacatttgttaaaagacaccaactaatttttatgaagg-------ta 16784423  T
Q  270 acaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
     |||||||||||||||||| ||||||||||||   ||||||||| ||||||||| |||||||||||| |||||||||    
T  16784424 gcaaagttataactaaaaaatggaaatcacaccttgaggtgtgggttgctaaaa-acaccttcatggatggcttcta 16784499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 168 - 301
Target Start/End: Original strand, 14041329 - 14041462
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||| | | ||||||||||||||| |||||||||||||| |||    |||||| ||||| ||||||| ||||||||||||||||||||||    
T  14041329 gggttttgccagaaaacatcttttatgaaggtgttttttagcaagttatcctattgacatttgttaaaaaacaccaattaatttttatgaaggtgtcttt 14041428  T
Q  268 taacaaagttataactaaaaagtggaaatcacac 301  Q
    |||||||||||||||||||||||||| |||||||    
T  14041429 taacaaagttataactaaaaagtggatatcacac 14041462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 40067689 - 40067578
Alignment:
Q  189 tttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaa 288  Q
    |||||||| |||||||||||||||||||||||  |  ||||| ||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  40067689 tttatgaatgtgtcttttagcaagttattctataaatatttgttaaaagacaccaactaatttttatgaaggtgtattttaacaaaattataactaaaaa 40067590  T
Q  289 gtggaaatcaca 300  Q
    ||||||||||||    
T  40067589 gtggaaatcaca 40067578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 195 - 336
Target Start/End: Original strand, 847575 - 847719
Alignment:
Q  195 aaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaa 294  Q
    ||||||||||||| |||||||||||| || |||||| ||||||||||||| ||||||||| | | |||||||||| |||||||| |||||||||||| ||    
T  847575 aaggtgtcttttaacaagttattctatgaacatttgttaaaagacaccaactaatttttagggaagtgtcttttagcaaagttaaaactaaaaagtgaaa 847674  T
Q  295 atcacac---gaggtgtggattgctaaaagacaccttcatgggtg 336  Q
    |||||||   ||||||| | |||||||||||||||||||| ||||    
T  847675 atcacaccttgaggtgtaggttgctaaaagacaccttcataggtg 847719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 3210943 - 3210847
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||| ||||   ||||||||| ||||||||||||||||||||||||||||||||    
T  3210943 ttttatgaaggtgtcttttagcaaagttataattaaaaagtggaaataacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttcta 3210847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 179 - 332
Target Start/End: Complemental strand, 31272921 - 31272765
Alignment:
Q  179 gaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtta 278  Q
    ||||| || |||||||||||||| ||||| ||| |||||||| ||| ||||| ||||||||| ||| |||||||||| ||| ||||||||| |||| |||    
T  31272921 gaagacacattttatgaaggtgttttttaacaaattattctatgagtatttgttaaaagacaacaactaatttttataaagatgtcttttagcaaaatta 31272822  T
Q  279 taactaaaaagtggaaatcaca---cgaggtgtggattgctaaaagacaccttcatg 332  Q
    ||||||||||||||||||||||    ||| | ||  |||||||||||||||||||||    
T  31272821 taactaaaaagtggaaatcacatcttgagatatgagttgctaaaagacaccttcatg 31272765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 13327084 - 13326966
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaa 270  Q
    |||||| |||||| || |||||||||||| ||||||||||||||||| || || ||||||||||||||| |||| |||||||||||||| |||||||||     
T  13327084 ttttgctagaagacacattttatgaaggtatcttttagcaagttattttatga-catttgctaaaagacgccaactaatttttatgaagttgtcttttat 13326986  T
Q  271 caaagttataactaaaaagtg 291  Q
    | |||||||||||||||||||    
T  13326985 c-aagttataactaaaaagtg 13326966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 38092154 - 38092233
Alignment:
Q  222 gagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac 301  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  38092154 gagcatttgttaaaagacaccaattaatttttatgaacgtgtcatttaacaaagttataactaaaaagtggaaatcacac 38092233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 41829655 - 41829567
Alignment:
Q  190 ttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtta 278  Q
    |||||||| |||||||||||||||||||||| || |||||| |||||||||| || |||||||||||||| ||||||||||||||||||    
T  41829655 ttatgaagatgtcttttagcaagttattctatgaacatttgttaaaagacacaaactaatttttatgaagatgtcttttaacaaagtta 41829567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 41624737 - 41624634
Alignment:
Q  240 accaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtg 336  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||||||||||  |||||||||   ||||||||  |||||||||||||| ||||||||||    
T  41624737 accaactaaattttacgaaggtgtcttttaacaaagttataactaaaaagtaaaaatcacaccttgaggtgtgagttgctaaaagacactttcatgggtg 41624638  T
Q  337 gctt 340  Q
    ||||    
T  41624637 gctt 41624634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 250 - 332
Target Start/End: Complemental strand, 16645556 - 16645471
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatg 332  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||   ||||| ||| |||||||||||||||||||||    
T  16645556 ttttatgaaggtgtcttttagtaaagttataactaaaaagtggaaatcacaccttgaggtatgggttgctaaaagacaccttcatg 16645471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 156 - 330
Target Start/End: Complemental strand, 1271196 - 1271015
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaa----aagacaccaaataattt 251  Q
    ||||||| | ||| ||||||| |||||| ||| ||||| ||||||| ||||| |||||||| |||   | |||||||||    || ||||||| ||||||    
T  1271196 atatatatatatgagttttgctagaagacaccctttataaaggtgttttttaacaagttatcctatatgtatttgctaattaaaatacaccaactaattt 1271097  T
Q  252 ttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttca 330  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||||||   || ||||| |||||||||| |||| ||||    
T  1271096 ttatgaaggtgtcttttaac-aagttataattaaaaagtggataatcacaccttgaagtgtgaattgctaaaatacacattca 1271015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 179 - 301
Target Start/End: Complemental strand, 1983625 - 1983503
Alignment:
Q  179 gaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtta 278  Q
    ||||| || |||||||||||||||||||| ||| ||||||||  |  ||||| ||||| | | ||| ||||||||||||| |||||||||| ||||| ||    
T  1983625 gaagacacattttatgaaggtgtcttttaacaaattattctataaaaatttgttaaaaaatatcaactaatttttatgaaagtgtcttttagcaaagcta 1983526  T
Q  279 taactaaaaagtggaaatcacac 301  Q
    ||||||||| ||| |||||||||    
T  1983525 taactaaaatgtgaaaatcacac 1983503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 44473756 - 44473833
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    |||||| | |||| |||||||||||||||||||||||||| || ||| ||||| ||||||||||||| ||||||||||    
T  44473756 agaagacatctttcatgaaggtgtcttttagcaagttattgtatgagtatttgttaaaagacaccaactaatttttat 44473833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 39590014 - 39589964
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcaca 300  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  39590014 ttttatgaaggtgtcttttagcaaagttataactaaaaagtggaattcaca 39589964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 39077162 - 39077208
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaat 296  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  39077162 ttttatgaatgtgtcttttagcaaagttataactaaaaagtggaaat 39077208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 14371658 - 14371613
Alignment:
Q  172 tttgcgagaagaaaccttttatgaaggtgtcttttagcaagttatt 217  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||    
T  14371658 tttgctagaagacaccttttatgaaggtgtcttttagcaagttatt 14371613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 16645588 - 16645536
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttag 208  Q
    ||||||| | ||||||||||| |||||| ||||||||||||||||||||||||    
T  16645588 atatatatatatgggttttgctagaagacaccttttatgaaggtgtcttttag 16645536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 3210975 - 3210920
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaa 211  Q
    ||||||| | ||| ||||||| |||||| |||||||||||||||||||||||||||    
T  3210975 atatatatatatgagttttgctagaagacaccttttatgaaggtgtcttttagcaa 3210920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 39590034 - 39589991
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaa 211  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  39590034 gggttttgctagaagacaccttttatgaaggtgtcttttagcaa 39589991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 40067530 - 40067462
Alignment:
Q  278 ataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||||||||   ||| ||||| || |||||||||| ||||||||||| ||||||    
T  40067530 ataactaaaaagtggaaatcacaccttgagatgtgggttactaaaagacatcttcatgggtgacttcta 40067462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 44508955 - 44508887
Alignment:
Q  276 ttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttc 341  Q
    |||||||||||| ||| |||||||||   ||||| ||  ||||||||||||||||||||||||||||||    
T  44508955 ttataactaaaaggtgaaaatcacaccttgaggtatgagttgctaaaagacaccttcatgggtggcttc 44508887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 41625036 - 41624976
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaaga 238  Q
    |||||| || ||||| |||| ||| |||||||||||||||| | |||||||||||||||||    
T  41625036 agaagacacattttaagaagatgttttttagcaagttattcaatgagcatttgctaaaaga 41624976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 40301372 - 40301414
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtgga 293  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  40301372 ttttatgaaggtgtcttttagcaa-gttataactaaaaagtgga 40301414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 35550814 - 35550773
Alignment:
Q  249 tttttatgaaggtgtcttttaacaaagttataactaaaaagt 290  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||    
T  35550814 tttttattaaggtgtcttttaacaaagatataagtaaaaagt 35550773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 6e-64; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 156 - 343
Target Start/End: Original strand, 23204363 - 23204553
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||||| |||||| | ||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| ||| ||||||||||    
T  23204363 atatatatatatgggttttgctagaagacatcttttatgaaggtgtcttttaacaagttattctatgagcatttgttaaaagacatcaactaatttttat 23204462  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||| |||||||||||||||||||||||||||||||   ||||||||  ||||||||||||||||||||||||||||||||    
T  23204463 gaaggtgtcttttagcaaagttataactaaaaagtggaaatcacaccttgaggtgtgacttgctaaaagacaccttcatgggtggcttcta 23204553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 9741724 - 9741902
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| || |||||||||||||||||||| ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||| |||    
T  9741724 gggttttgctagaagacacattttatgaaggtgtcttttaacaaattattctatgagcatttgctaaaaaacaccaactaatttttatgaaggtgttttt 9741823  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    || |||||||||||||||||||||||||||||||   ||| ||||| ||||||||||||||||||||| ||||||||||    
T  9741824 tagcaaagttataactaaaaagtggaaatcacaccttgagatgtgggttgctaaaagacaccttcatgagtggcttcta 9741902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 169 - 343
Target Start/End: Complemental strand, 38758779 - 38758603
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||| |||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||| ||||||||||||    
T  38758779 ggttttgctagaagacacattttatgaaggtgtcttttagcaagttattctatgagcatt-gctaaaagacaccaactgatttttataaaggtgtctttt 38758681  T
Q  269 aacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||||||| |||||||||   ||| ||||| ||||||||||||||||||||| ||||||||||    
T  38758680 aacaaagttataactaaaaagtgaaaatcacaccttgagatgtgggttgctaaaagacaccttcatgagtggcttcta 38758603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 167 - 336
Target Start/End: Complemental strand, 37172553 - 37172381
Alignment:
Q  167 tgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctt 266  Q
    ||||||| || |||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37172553 tgggtttggctagaagtcaccttttatgaaggtgtcttttaacaagttattctacgagcatttgctaaaagacaccaactaatttttatgaaggtgtctt 37172454  T
Q  267 ttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtg 336  Q
    |||  ||| |||||||||||||||| |||||||||    |||| |||||||||||||||||||||||||||||    
T  37172453 ttagaaaaattataactaaaaagtgaaaatcacaccttaaggtatggattgctaaaagacaccttcatgggtg 37172381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 156 - 343
Target Start/End: Original strand, 18015630 - 18015819
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||||| ||| || ||||| |||||||||||||||||||||||||||  | || |||||| ||||||||||||| ||||||||||    
T  18015630 atatatatatatgggttttgctaga-gacaccttatatgaaggtgtcttttagcaagttattgcatgaacatttgttaaaagacaccaactaatttttat 18015728  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||   ||||||||| ||||||||||||| ||||||||||||||||||    
T  18015729 gaaggtgttttttagcaaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacatcttcatgggtggcttcta 18015819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 168 - 343
Target Start/End: Complemental strand, 17689498 - 17689321
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||  |||||| || |||||| ||| |||||||||| | ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  17689498 gggttttgttagaagacacattttataaagatgtcttttagtaggttattctatgagcatttgctaaaagacaccac-taatttttatgaaggtgtcttt 17689400  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    || ||||||||||||||||||||| |||||||||    |||||||||||||||||||||||||| ||||||||||||||    
T  17689399 tagcaaagttataactaaaaagtgaaaatcacaccttaaggtgtggattgctaaaagacaccttaatgggtggcttcta 17689321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 156 - 301
Target Start/End: Original strand, 20269220 - 20269365
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | |||| |||||| |||||| | |||||||||||||||||||||||||||||||||| || |||||||||||||||| ||| ||||||||||    
T  20269220 atatatatatatggattttgctagaagacagcttttatgaaggtgtcttttagcaagttattctatgaacatttgctaaaagacaacaattaatttttat 20269319  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac 301  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  20269320 gaaggtgtcttttaataaaattataactaaaaagtggaaatcacac 20269365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 28813195 - 28813040
Alignment:
Q  191 tatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagt 290  Q
    ||||||| ||| |||||||||| ||||||| || |||||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||||    
T  28813195 tatgaagatgttttttagcaagatattctatgatcatttgctaaaagacaccaactaatttttataaaggcgtcttttagcaaagttataactaaaaagt 28813096  T
Q  291 ggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||   ||||||||| ||||||||||||||||||||| ||||||||||    
T  28813095 ggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgagtggcttcta 28813040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 170 - 343
Target Start/End: Original strand, 27365716 - 27365892
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||  |||||| |||||||||||||    
T  27365716 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgagcatttgttaaaagacaccacctaggttttataaaggtgtctttta 27365815  T
Q  270 acaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
     | |||||||||||||||||| || ||||||||   ||||||||||||||||||| ||||||||||||||| ||||||    
T  27365816 gc-aagttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaaaacaccttcatgggtgtcttcta 27365892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 191 - 340
Target Start/End: Complemental strand, 38293616 - 38293463
Alignment:
Q  191 tatgaaggtgtcttttagcaagttattctacgagcatttgct-aaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaag 289  Q
    ||||||||||||||||| |||||||||||| ||||||||  | |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  38293616 tatgaaggtgtcttttaacaagttattctatgagcattttattaaaagacaccaactaatttttatgaacgtgtcttttaacaaagttataactaaaaag 38293517  T
Q  290 tggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggctt 340  Q
    ||||||||||||   ||||||||||||| ||||||||| |||||||| ||||||    
T  38293516 tggaaatcacaccatgaggtgtggattgttaaaagacatcttcatggctggctt 38293463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 28038376 - 28038241
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||||| |||||| || ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  28038376 atatatatatatgggttttgctagaagacacattttatgaaagtgtcttttagcaagttattctatgagcatttgctaaaacacaccaactaatttttat 28038277  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtg 291  Q
    ||||||||||||||  ||||||||||||||||||||    
T  28038276 gaaggtgtcttttagtaaagttataactaaaaagtg 28038241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 156 - 301
Target Start/End: Complemental strand, 19323872 - 19323727
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | || |||||||| |||||| |||||||||||||||||||||||||||||||| ||   |||||||| ||||||||||||| ||||||||||    
T  19323872 atatatatatataggttttgctagaagacaccttttatgaaggtgtcttttagcaagttatccttttagcatttgttaaaagacaccaattaatttttat 19323773  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac 301  Q
    ||| |||||||||| ||||||||||||||||||||||| |||||||    
T  19323772 gaaagtgtcttttagcaaagttataactaaaaagtggatatcacac 19323727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 168 - 299
Target Start/End: Complemental strand, 16994299 - 16994168
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| || ||||||||||||||  ||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||    
T  16994299 gggttttgctagaagacacattttatgaaggtgttgtttagcaagttattctatgagcatttgttaaaagacaccaactaatttttatgaagatgtcttt 16994200  T
Q  268 taacaaagttataactaaaaagtggaaatcac 299  Q
    || ||||||||||||||||||||| |||||||    
T  16994199 tagcaaagttataactaaaaagtgcaaatcac 16994168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 210 - 343
Target Start/End: Original strand, 19995319 - 19995452
Alignment:
Q  210 aagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggt 306  Q
    ||||||||||| ||||||||| ||||| ||||||| |||||   |||||||||||||||| |||||||||||||||||||||||||||||||   |||||    
T  19995319 aagttattctatgagcatttgttaaaaaacaccaactaatt---atgaaggtgtcttttagcaaagttataactaaaaagtggaaatcacaccttgaggt 19995415  T
Q  307 gtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||| |||||||||||||||||||    
T  19995416 gtggattgctaaaagaccccttcatgggtggcttcta 19995452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 19325166 - 19325064
Alignment:
Q  200 gtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaag-ttataactaaaaagtggaaatca 298  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  19325166 gtcttttagcaagttattctatgagcatttgctaaaagaaaccaactaatttttatgaaggtgtcttttagcaaagtttataactaaaaagtggaaatca 19325067  T
Q  299 cac 301  Q
    |||    
T  19325066 cac 19325064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 188 - 301
Target Start/End: Original strand, 15978821 - 15978934
Alignment:
Q  188 ttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaa 287  Q
    |||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||| |||||||||| || ||||||||||||||| ||||||||||||    
T  15978821 ttttatgaaggtgtcttttagcaaattaatctatgagtatttgctaaaagacaccaactaatttttataaaagtgtcttttaacaaaattataactaaaa 15978920  T
Q  288 agtggaaatcacac 301  Q
    |||  |||||||||    
T  15978921 agtaaaaatcacac 15978934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 168 - 330
Target Start/End: Complemental strand, 13960537 - 13960372
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    |||||| || |||||| || ||||||||||||||||||||||||||||| |||   || |||||||||||||| ||  ||||||||||||||||||||||    
T  13960537 gggtttcgctagaagacactttttatgaaggtgtcttttagcaagttatcctataggcctttgctaaaagaca-cagctaatttttatgaaggtgtcttt 13960439  T
Q  268 taacaaagttataactaaaaagtgga-aatcaca---cgaggtgtggattgctaaaagacaccttca 330  Q
    || |||  |||| ||||||||||||| |||||||    ||||||| ||||||||||| |||||||||    
T  13960438 tagcaagtttatgactaaaaagtggataatcacatcttgaggtgttgattgctaaaaaacaccttca 13960372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 731 - 813
Target Start/End: Original strand, 27473664 - 27473746
Alignment:
Q  731 tgctattgattttgaaaatgcatttctcattgtaatctcaaatttcattatttatccttctatgcatgatcattcctcttctt 813  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  27473664 tgctattgattttgaaaatgcatttatcattgcaatctcaaatttctttacttatccttctatacatgatcattcctcttctt 27473746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 16273727 - 16273624
Alignment:
Q  166 atgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtct 265  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||||||||||  ||    ||||||||||||||||| || ||||||||||||||||||||    
T  16273727 atgggttttgctagaagacaccctttatgaaggtgtcttttagcaagttatcttatagacatttgctaaaagacacaaactaatttttatgaaggtgtct 16273628  T
Q  266 ttta 269  Q
    ||||    
T  16273627 ttta 16273624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 222 - 332
Target Start/End: Complemental strand, 26730410 - 26730298
Alignment:
Q  222 gagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaa 318  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| |||||| ||   ||||||| | |||||||    
T  26730410 gagcatttgttaaaagacaccaactaatttttatgaaggtgtcttttagcaaagttataact-aaaagtgaaaatcaaaccttgaggtgtaggttgctaa 26730312  T
Q  319 aagacaccttcatg 332  Q
    || |||||||||||    
T  26730311 aacacaccttcatg 26730298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 33429302 - 33429221
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataat 249  Q
    ||||||||| |||||| || ||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  33429302 gggttttgctagaagacacattttatgaaggtgccttttagcaagttattctatgagcatttgctgaaagacaccaattaat 33429221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 19863187 - 19863090
Alignment:
Q  249 tttttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||| ||||||||||||||||||| |||| |||||||||||||| ||||||||   ||| |||||||||||||||||||||||||||||||| |||||    
T  19863187 tttttgtgaaggtgtcttttaacaa-gttaaaactaaaaagtggataatcacactttgagatgtggattgctaaaagacaccttcatgggtggtttcta 19863090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 250 - 320
Target Start/End: Complemental strand, 16490997 - 16490924
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaa 320  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||   |||||||||||||||||||    
T  16490997 ttttatgaaggtgtcttttagcaaagttataactaaaaagtgaaaatcacaccttgaggtgtggattgctaaaa 16490924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 168 - 290
Target Start/End: Complemental strand, 31056532 - 31056411
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| ||||||||||||||||| |||||||||||||   ||   |||||| | |||||||||||| |||||||||| || ||||||||    
T  31056532 gggttttgctagaagacaccttttatgaaggtgtattttagcaagttaacttataggcatttccgaaaagacaccaactaatttttattaaagtgtcttt 31056433  T
Q  268 taacaaagttataactaaaaagt 290  Q
    || | ||||||||| ||||||||    
T  31056432 tagc-aagttataattaaaaagt 31056411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 178 - 290
Target Start/End: Complemental strand, 31042673 - 31042562
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtt 277  Q
    |||||| ||| ||||||||||||| ||||||||||||||  ||   ||||||| ||||||||||||| |||||||||| || |||||||||| | |||||    
T  31042673 agaagacaccctttatgaaggtgtattttagcaagttatcttataggcatttgttaaaagacaccaactaatttttattaaagtgtcttttagc-aagtt 31042575  T
Q  278 ataactaaaaagt 290  Q
    ||||| |||||||    
T  31042574 ataacaaaaaagt 31042562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 21913906 - 21913836
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaaga 238  Q
    ||||||||| |||||| ||| |||||||||||||||||||||||||||| |||   |||||||||||||||    
T  21913906 gggttttgctagaagacaccctttatgaaggtgtcttttagcaagttatcctataggcatttgctaaaaga 21913836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 16490795 - 16490718
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacac 325  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||||    |||||||| ||||||||||||||    
T  16490795 ttttatgaagatgtcttttaccaaagttata-ctaaaaagtggaaatcacaccttaaggtgtgggttgctaaaagacac 16490718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 257 - 341
Target Start/End: Complemental strand, 19323989 - 19323908
Alignment:
Q  257 aaggtgtcttttaacaaagttataactaaaaagtggaaatcacacgaggtgtggattgctaaaagacaccttcatgggtggcttc 341  Q
    ||||||||||||| || | ||||||||||||| ||||||||||||    |||| |||||||||||||||||| |||| |||||||    
T  19323989 aaggtgtcttttagcataattataactaaaaaatggaaatcacac---atgtgaattgctaaaagacacctttatggatggcttc 19323908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 23129675 - 23129597
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcaca---cgaggtgtggattgctaaaagacac 325  Q
    |||||||||||||||||||||| ||||||||||||||| || || |||||||    ||||||||||||||||||||||||    
T  23129675 ttttatgaaggtgtcttttaac-aagttataactaaaaggttgataatcacatcttgaggtgtggattgctaaaagacac 23129597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 231 - 290
Target Start/End: Complemental strand, 5497840 - 5497782
Alignment:
Q  231 ctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagt 290  Q
    |||||||||||||| ||||||||||||| |||||||| | | ||||||||||||||||||    
T  5497840 ctaaaagacaccaactaatttttatgaaagtgtctttcagc-aagttataactaaaaagt 5497782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 35425310 - 35425249
Alignment:
Q  228 ttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtg 291  Q
    ||||||||||||||||  | |||||||||| |||||||||||||||| ||||||| ||||||||    
T  35425310 ttgctaaaagacaccac-tgatttttatgacggtgtcttttaacaaa-ttataacgaaaaagtg 35425249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 33696261 - 33696220
Alignment:
Q  249 tttttatgaaggtgtcttttaacaaagttataactaaaaagt 290  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||    
T  33696261 tttttattaaggtgtgttttaacaaagatataactaaaaagt 33696220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 2e-63; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 169 - 343
Target Start/End: Complemental strand, 41378527 - 41378350
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||| |||||| || |||||| ||||||| |||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  41378527 ggttttgctagaagacactttttattaaggtgttttttagcaagttattctatgaacatttgctaaaagacaccaattaatttttatgaaggtgtctttt 41378428  T
Q  269 aacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    | |||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||    
T  41378427 agcaaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttcta 41378350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 156 - 343
Target Start/End: Original strand, 35983093 - 35983283
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | || |||||||| |||||| || |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  35983093 atatatatatataggttttgctagaagacacattttatgaagatgtcttttagcaagttattctatgagcatttgctaaaagacaccaattaatttttat 35983192  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||    |||||||| |||||||||||||||||||| |||||||||||    
T  35983193 gaaggtatcttttagcaaagttataactaaaaagtgaaaatcacaccttaaggtgtgggttgctaaaagacaccttcataggtggcttcta 35983283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 156 - 343
Target Start/End: Original strand, 36004505 - 36004695
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | || |||||||| |||||| || |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  36004505 atatatatatataggttttgctagaagacacattttatgaagatgtcttttagcaagttattctatgagcatttgctaaaagacaccaattaatttttat 36004604  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||    |||||||| |||||||||||||||||||| |||||||||||    
T  36004605 gaaggtatcttttagcaaagttataactaaaaagtgaaaatcacaccttaaggtgtgggttgctaaaagacaccttcataggtggcttcta 36004695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 156 - 343
Target Start/End: Complemental strand, 5995222 - 5995031
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  5995222 atatatatatatgggttttgctagaagacaccttttatgaaagtgtcttttagcaagttattatatgagcatttgctaaaagacaccaactaatttttat 5995123  T
Q  256 gaaggtgtcttttaacaaagttataacta-aaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||| |||| ||||||||| ||||||| |||||||||   ||||||| |||||||||||||||||||||||| || ||||||    
T  5995122 gaaggtgtcttttagcaaaattataactaaaaaagtgtaaatcacaccttgaggtgtagattgctaaaagacaccttcatggatgacttcta 5995031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 171 - 343
Target Start/End: Original strand, 21993471 - 21993646
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaa 270  Q
    |||||| |||||| || |||||||||||||||||||||||||||||||||  |||||||  ||||||||||||| ||||||||||||||||||||||||     
T  21993471 ttttgctagaagacacattttatgaaggtgtcttttagcaagttattctattagcattttttaaaagacaccaactaatttttatgaaggtgtcttttag 21993570  T
Q  271 caaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||||| |||||||||   ||||||||| ||||||||||||| ||||||||||||||||||    
T  21993571 caaagttataactaaaaagtgaaaatcacaccttgaggtgtgggttgctaaaagacaacttcatgggtggcttcta 21993646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 168 - 343
Target Start/End: Complemental strand, 48227388 - 48227210
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    |||||||||  ||||| ||||||||||||||||| |||||||||| ||||||| || |||||||||||||||||||| |||||||||| |||||||||||    
T  48227388 gggttttgctggaagacaccttttatgaaggtgtattttagcaagatattctatgatcatttgctaaaagacaccaactaatttttataaaggtgtcttt 48227289  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    || |||||||||||||||||||||||||||||||   || |||||| ||||||||||||||||||||| ||||||||||    
T  48227288 tagcaaagttataactaaaaagtggaaatcacaccttgaagtgtgggttgctaaaagacaccttcatgagtggcttcta 48227210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 169 - 343
Target Start/End: Complemental strand, 9522619 - 9522445
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||| |||||| || |||||||||| ||||||||||||||||| |||||||| |||| |||||||||||||| ||||||||   ||||||||||||    
T  9522619 ggttttgctagaagacacattttatgaagatgtcttttagcaagttaatctacgaggatttcctaaaagacaccaactaattttt---aaggtgtctttt 9522523  T
Q  269 aacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    | |||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||    
T  9522522 atcaaagttataactaaaaagtggaaatcacaccttgaggtgtggattgctaagagacaccttcatgggtggcttcta 9522445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 31953157 - 31953335
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||| | ||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| ||| |||||||||||||||||| |||    
T  31953157 gggttttgctagaacacaccttttatgaaggtgtcttttagcaagttagtctatgagcatttgttaaaagacatcaattaatttttatgaaggtgttttt 31953256  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||| || |||||| |||| |||||    
T  31953257 taacaaagttataactaaaaagtggaaatcacaccttgaggtgtgtgttgctaaaagatacattcatgagtggtttcta 31953335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 168 - 343
Target Start/End: Complemental strand, 3203448 - 3203266
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||    
T  3203448 gggttttgctagaagataccttttatgaaggtgtcttttagcaagttattctatgagcatttgtttaaagacaccaactaatttttatgaaggtgtcttt 3203349  T
Q  268 ----taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
        || |||| |||||||||||||||| |||||||||   ||||||||| |||||||||||||||||||||| ||| |||||    
T  3203348 tagctagcaaatttataactaaaaagtgaaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggtttcta 3203266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 24611437 - 24611592
Alignment:
Q  191 tatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagt 290  Q
    |||||||||||||||||||||||||||||  ||||||||  ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  24611437 tatgaaggtgtcttttagcaagttattctctgagcatttattaaaagataccaactaatttttatgaaagtgtcttttaacaaagttataactaaaaagt 24611536  T
Q  291 ggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    | |||||||||   ||||||||| |||||||||||||||||||| |||||||||||    
T  24611537 gaaaatcacacattgaggtgtgggttgctaaaagacaccttcataggtggcttcta 24611592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 178 - 343
Target Start/End: Original strand, 41037133 - 41037301
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtt 277  Q
    |||||| |||||||||||||||||||||||| || |||||||| ||||||||| |||||||||| || ||| |||||||||||||||||||| |||||||    
T  41037133 agaagacaccttttatgaaggtgtcttttagtaaattattctatgagcatttggtaaaagacacaaactaagttttatgaaggtgtcttttagcaaagtt 41037232  T
Q  278 ataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||||||||   ||| ||||| ||| |||||||||||||||||| || ||||||    
T  41037233 ataactaaaaagtggaaatcacaccttgagatgtgggttgttaaaagacaccttcatggatgacttcta 41037301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 202 - 343
Target Start/End: Complemental strand, 41586002 - 41585858
Alignment:
Q  202 cttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac 301  Q
    ||||||||| |||||||||  |||||||| ||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  41586002 cttttagcaggttattctattagcatttgttaaaagacaccaactaatttttatgaaggtgtcttttagcaaaattataactaaaaagtggaaatcacac 41585903  T
Q  302 ---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
       ||||||||| ||||||||||||||||||||||||||||||||    
T  41585902 cttgaggtgtgggttgctaaaagacaccttcatgggtggcttcta 41585858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 156 - 343
Target Start/End: Original strand, 27130983 - 27131173
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||||| |||||| ||| ||||||||||||| ||||||||||||||  ||   ||||||||||||||||||||| ||||||||||    
T  27130983 atatatatatatgggttttgctagaagacaccctttatgaaggtgttttttagcaagttatcttataggcatttgctaaaagacaccaactaatttttat 27131082  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||| | |||||||||||||||||| || ||||||||   ||||||||||||||||||||||||||||||| ||| ||||||    
T  27131083 gaaggtgtcttttagc-aagttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaagacaccttcatgtgtgtcttcta 27131173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 156 - 343
Target Start/End: Original strand, 45099957 - 45100148
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||||| |||||| || |||||||||||||| ||||| |||||||||| | ||||||||| ||||||||||||| ||||||||||    
T  45099957 atatatatatatgggttttgctagaagacacattttatgaaggtgttttttaacaagttattcaatgagcatttgttaaaagacaccaactaatttttat 45100056  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcaca---cgaggtgtggattgctaaaagacaccttca-tgggtggcttcta 343  Q
    |||||||||||||| |||||||| |||||||||||| ||||||||    |||| |||| ||||||||||||||||||| | |||||||||||    
T  45100057 gaaggtgtcttttagcaaagttacaactaaaaagtgtaaatcacatcttgaggcgtgggttgctaaaagacaccttcatttggtggcttcta 45100148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 170 - 343
Target Start/End: Complemental strand, 35221825 - 35221644
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctac-----gagcatttgctaaaagacaccaaataatttttatgaaggtgtc 264  Q
    ||||||| |||||| || |||||||||||||||||||||||||||||||||      ||||||||| ||||||||||||| |||||||||||||||||||    
T  35221825 gttttgctagaagatactttttatgaaggtgtcttttagcaagttattctattctatgagcatttgttaaaagacaccaactaatttttatgaaggtgtc 35221726  T
Q  265 ttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||| | |||||||||||||||||| |||||  |||   ||||||||| |||||||||||||||||||| |||||||||||    
T  35221725 ttttagctaagttataactaaaaagtagaaatttcaccttgaggtgtgggttgctaaaagacaccttcattggtggcttcta 35221644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 166 - 344
Target Start/End: Complemental strand, 46003892 - 46003710
Alignment:
Q  166 atgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacga-gcatttgctaaaagacaccaaataatttttatgaaggtgtc 264  Q
    ||||||||||| |||||| || ||| |||||||||||||||||||||||| |||| || ||||||||||||||||| ||| |||||||||| ||||||||    
T  46003892 atgggttttgctagaagacacatttcatgaaggtgtcttttagcaagttactctatgaagcatttgctaaaagacatcaactaatttttataaaggtgtc 46003793  T
Q  265 ttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttctaa 344  Q
    ||||| ||||||||||||||||||||| |||| ||||    || ||||  |||||||||||||| ||||||||||||||||||    
T  46003792 ttttagcaaagttataactaaaaagtgaaaattacaccttaagatgtgacttgctaaaagacacattcatgggtggcttctaa 46003710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 171 - 343
Target Start/End: Original strand, 3961178 - 3961353
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaa 270  Q
    |||||| |||||| || ||||||||| ||||||||||||||||||||||| || |||||| ||||||||||||| |||||||||| ||||||| |||||     
T  3961178 ttttgctagaagacacattttatgaaagtgtcttttagcaagttattctatgatcatttgttaaaagacaccaactaatttttattaaggtgttttttag 3961277  T
Q  271 caaagttataactaaaaagtggaaatcaca---cgaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||| ||||||||||||| || |||| |||    ||||||||| ||||||||||||||||||||||||| ||||||    
T  3961278 caaaattataactaaaaattgaaaatgacatcttgaggtgtgggttgctaaaagacaccttcatgggtgacttcta 3961353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 26928054 - 26927944
Alignment:
Q  236 agacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatg 332  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||    
T  26928054 agacaccaactaatttttatgaaggtgtcttttagcaaagttataactaaaaagtggaaatcacaccttgaggtgtgagttgctaaaagacaccttcatg 26927955  T
Q  333 ggtggcttcta 343  Q
    |||||||||||    
T  26927954 ggtggcttcta 26927944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 170 - 290
Target Start/End: Original strand, 24251831 - 24251948
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||||| ||||||||||||||||| ||  |||||||||| |||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  24251831 gttttgctagaagacaccttttatgaaggtgtatt--agcaagttatcctataagcatttgctaaaagacaccaattaatttttatgaaggtgtctttta 24251928  T
Q  270 acaaagttataactaaaaagt 290  Q
    || ||||||||||||||||||    
T  24251929 ac-aagttataactaaaaagt 24251948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 166 - 301
Target Start/End: Complemental strand, 43077652 - 43077517
Alignment:
Q  166 atgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtct 265  Q
    ||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||    |||||| ||||||||||||| |||||||||| ||||| |||    
T  43077652 atgggttttgctagaagacaccttttatgaaggtgttttttagcaagtttttctattgacatttgttaaaagacaccaactaatttttatcaaggtttct 43077553  T
Q  266 tttaacaaagttataactaaaaagtggaaatcacac 301  Q
    |||| |||||||||||||||||| || | |||||||    
T  43077552 tttagcaaagttataactaaaaaatgaatatcacac 43077517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 14656530 - 14656630
Alignment:
Q  246 taatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttct 342  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||   ||||||||| || |||||||||||||||||| |||||||||    
T  14656530 taatttttatgaaggtgtcttttaacaaagttataactaaaaggtgaaaatcacacattgaggtgtgggtttctaaaagacaccttcatgagtggcttct 14656629  T
Q  343 a 343  Q
    |    
T  14656630 a 14656630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 156 - 293
Target Start/End: Complemental strand, 42373627 - 42373491
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||||| | ||||||||| |||||| |||||||||||| |||||||||||||| |||| |||    |||||| ||||||||||||| ||||||||||    
T  42373627 atatataaaaaagggttttgctagaagacaccttttatgaatgtgtcttttagcaaattatcctattgacatttgttaaaagacaccaattaatttttat 42373528  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtgga 293  Q
    |||| ||||||||| | ||||| |||||||||||||||    
T  42373527 gaagatgtcttttagc-aagttctaactaaaaagtgga 42373491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 189 - 319
Target Start/End: Original strand, 20568277 - 20568411
Alignment:
Q  189 tttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataa-tttttatgaaggtgtcttttaacaaagttataactaaaa 287  Q
    |||||||| ||||||||||||||||||| |||  | |||||||||||||||||||| ||| ||||||| |||||||||| || |||| ||||||||||||    
T  20568277 tttatgaatgtgtcttttagcaagttatcctattaacatttgctaaaagacaccaagtaattttttatcaaggtgtcttgtagcaaa-ttataactaaaa 20568375  T
Q  288 agtgga-aatcacac---gaggtgtggattgctaaa 319  Q
    |||||| ||||||||   ||||||||||||||||||    
T  20568376 agtggataatcacaccttgaggtgtggattgctaaa 20568411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 168 - 293
Target Start/End: Original strand, 38368158 - 38368282
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||| ||| |||||| |||||||||||| ||||||||||||||| |||  ||  | |||||||||||||||||||| |||||||||||||||||| |||    
T  38368158 gggttatgctagaagacaccttttatgaatgtgtcttttagcaagatatcatattaacatttgctaaaagacaccaactaatttttatgaaggtgtattt 38368257  T
Q  268 taacaaagttataactaaaaagtgga 293  Q
    || | |||||||||||||||| ||||    
T  38368258 tagc-aagttataactaaaaattgga 38368282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 27946978 - 27946861
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagc-atttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    ||||||| |||||| ||  |||||| |||||||||||||||||||||||||  ||| ||||| ||||| ||||||| |||||||||||||||||||||||    
T  27946978 gttttgctagaagacactctttatggaggtgtcttttagcaagttattctat-agctatttgttaaaacacaccaactaatttttatgaaggtgtctttt 27946880  T
Q  269 aacaaagttataactaaaaa 288  Q
    |||||| |||||||||||||    
T  27946879 aacaaa-ttataactaaaaa 27946861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 193 - 330
Target Start/End: Complemental strand, 48709167 - 48709027
Alignment:
Q  193 tgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtgg 292  Q
    ||||||| || ||||||||||||| |||   |||||||||||||||||| || |||||||||||||||||||||||| | ||||||| ||||||||||||    
T  48709167 tgaaggtttcatttagcaagttatcctataggcatttgctaaaagacactaactaatttttatgaaggtgtcttttagc-aagttattactaaaaagtgg 48709069  T
Q  293 a-aatcacac---gaggtgtggattgctaaaagacaccttca 330  Q
    | | ||||||   ||||||||||||||| |||||||| ||||    
T  48709068 atagtcacaccttgaggtgtggattgctgaaagacacattca 48709027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 227 - 343
Target Start/End: Complemental strand, 3350112 - 3349993
Alignment:
Q  227 tttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagac 323  Q
    ||||||| |||||||||| || |||| |||||||||||||||| |||| ||||||||||||||||||||||||||   ||| ||||| ||||||||| ||    
T  3350112 tttgctagaagacaccaactacttttaatgaaggtgtcttttagcaaaattataactaaaaagtggaaatcacaccttgagatgtgggttgctaaaaaac 3350013  T
Q  324 accttcatgggtggcttcta 343  Q
    || || || |||||||||||    
T  3350012 acttttataggtggcttcta 3349993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 28333835 - 28333742
Alignment:
Q  253 tatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||   || |||| | ||||||||||||||||||||| ||||||||||    
T  28333835 tatgaaggtgtcttttagcaaagttataactaaaaagtgaaaatcacaccttgacgtgttggttgctaaaagacaccttcatgagtggcttcta 28333742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 32392313 - 32392216
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||| |||  |||||||||||||||||| |||| |||   ||||||||| ||||||||||||||||||||||||||||||||    
T  32392313 ttttatgaaggtgtcttttagcaagtttataactaaaaagtggataatctcaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttcta 32392216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 178 - 290
Target Start/End: Complemental strand, 12362979 - 12362868
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtt 277  Q
    |||||| ||| |||||||| |||||||||| ||||||||||||    |||||| ||||||||| |||  ||||||||||||| |||||||||||||| ||    
T  12362979 agaagacaccctttatgaatgtgtcttttaacaagttattctatagacatttgttaaaagacatcaacaaatttttatgaagatgtcttttaacaaa-tt 12362881  T
Q  278 ataactaaaaagt 290  Q
    |||| ||||||||    
T  12362880 ataattaaaaagt 12362868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 7596953 - 7596870
Alignment:
Q  251 tttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcat 331  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||   |||||||| |||| ||||||||||||||||    
T  7596953 tttatgaaggtgtcttttaacaaa-ttataactaaaaagtggataatcacacattgaggtgtgaattgttaaaagacaccttcat 7596870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 240 - 344
Target Start/End: Original strand, 3875209 - 3875315
Alignment:
Q  240 accaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttcatgggt 335  Q
    ||||| |||||||||||||||| ||||||||| ||||||||| |||||||| || ||||||||   ||||| ||||||| |||||||||| |||||||||    
T  3875209 accaactaatttttatgaaggtttcttttaac-aagttataa-taaaaagttgataatcacaccttgaggtatggattgttaaaagacactttcatgggt 3875306  T
Q  336 ggcttctaa 344  Q
    | |||||||    
T  3875307 gtcttctaa 3875315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 20009256 - 20009206
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcaca 300  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  20009256 ttttatgaaggtgtcttttaacaaagttataactaaaaagtaaaaatcaca 20009206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 48625021 - 48624971
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcaca 300  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  48625021 ttttatgaaggtgtcttttagcaaagttataactaaaaaatggaaatcaca 48624971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 36343021 - 36343110
Alignment:
Q  188 ttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaa-ggtgtcttttaacaaagt 276  Q
    |||||||||| ||| ||||| ||||||||| || ||||||||| ||||||||||||| |||||||||| || ||||| |||||| |||||    
T  36343021 ttttatgaagatgttttttaacaagttattttatgagcatttgttaaaagacaccaactaatttttataaatggtgttttttaaaaaagt 36343110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 28059379 - 28059314
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaa 236  Q
    ||||||| |||||| ||||||||||||||  |||||||| ||||||||||| |||||||||||||||    
T  28059379 gttttgctagaagacaccttttatgaagga-tcttttaggaagttattctatgagcatttgctaaaa 28059314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 32392333 - 32392287
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagtt 214  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  32392333 gggttttgctagaagacaccttttatgaaggtgtcttttagcaagtt 32392287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 44868099 - 44868034
Alignment:
Q  227 tttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtgga 293  Q
    ||||||| |||||||| | ||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  44868099 tttgctagaagacacccactaatttttatgaaagtgttttttaac-aagttataactaaaaagtgga 44868034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 14313960 - 14313998
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttat 216  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  14313960 agaagataccttttatgaaggtgtcttttagcaagttat 14313998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 3875105 - 3875178
Alignment:
Q  166 atgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagac 239  Q
    ||||||||||| |||||| || ||||||||| |||| |||||||||||||| |||  | |||||| ||||||||    
T  3875105 atgggttttgctagaagacacattttatgaaagtgtattttagcaagttatcctataaacatttgttaaaagac 3875178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 26928584 - 26928541
Alignment:
Q  206 tagcaagttattctacgagcatttgctaaaagacaccaaataat 249  Q
    |||||||||||| || ||||||||||||||||||||||| ||||    
T  26928584 tagcaagttattttatgagcatttgctaaaagacaccaactaat 26928541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 48625041 - 48624998
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaa 211  Q
    ||||||||| | |||| |||||||||||||||||||||||||||    
T  48625041 gggttttgctataagacaccttttatgaaggtgtcttttagcaa 48624998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 20418026 - 20417981
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttat 216  Q
    |||||| |||||| |||||||||||| |||||||||||||| ||||    
T  20418026 ttttgctagaagacaccttttatgaatgtgtcttttagcaaattat 20417981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 48709110 - 48709081
Alignment:
Q  188 ttttatgaaggtgtcttttagcaagttatt 217  Q
    ||||||||||||||||||||||||||||||    
T  48709110 ttttatgaaggtgtcttttagcaagttatt 48709081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 4e-62; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 187 - 343
Target Start/End: Original strand, 15081138 - 15081297
Alignment:
Q  187 cttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaa 286  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  15081138 cttttatgaaggtgtcttttagcaagttattctatgagcatttgttaaaagacaccaattaattgttatgaaggtgtcttttagcaaagttataactaaa 15081237  T
Q  287 aagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||    
T  15081238 aagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttcta 15081297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 171 - 344
Target Start/End: Original strand, 10074994 - 10075170
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaa 270  Q
    |||||| |||||| |||||||||||| |||||||||| ||||||||| || ||  ||||| ||||||||||||| |||||||||||||||||||||||||    
T  10074994 ttttgctagaagacaccttttatgaaagtgtcttttaacaagttattttatgaatatttgttaaaagacaccaactaatttttatgaaggtgtcttttaa 10075093  T
Q  271 caaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttctaa 344  Q
    ||||||||||| |||||||||||||||||||   ||||||||  ||||||||||||||||| |||||||||||||||    
T  10075094 caaagttataattaaaaagtggaaatcacaccttgaggtgtgagttgctaaaagacacctttatgggtggcttctaa 10075170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 12159595 - 12159435
Alignment:
Q  179 gaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtta 278  Q
    ||||| ||||||||||||||||||||||||||||||||| ||  |||||||| || |||||||||| |||||||||||||||||||||||| ||||||||    
T  12159595 gaagacaccttttatgaaggtgtcttttagcaagttattatattagcatttgttagaagacaccaactaatttttatgaaggtgtcttttagcaaagtta 12159496  T
Q  279 taactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtg 336  Q
    ||||||||||||| |||||||||   ||||||||| |||||||||||||||||||||||||    
T  12159495 taactaaaaagtgaaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtg 12159435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 165 - 343
Target Start/End: Original strand, 6322485 - 6322666
Alignment:
Q  165 gatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtc 264  Q
    |||||||||||| |||||| | ||||||||| ||||| ||||| ||||||||||||  |||||||| ||||| |||| || |||||||||||||||||||    
T  6322485 gatgggttttgctagaagacatcttttatgagggtgttttttaacaagttattctattagcatttgttaaaaaacacaaattaatttttatgaaggtgtc 6322584  T
Q  265 ttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||| ||||||||||||||||||||||||| |||||    ||||||||||||||||||||||||||||||| |||||||||    
T  6322585 ttttagcaaagttataactaaaaagtggaaaccacaccttaaggtgtggattgctaaaagacaccttcatggatggcttcta 6322666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 172 - 343
Target Start/End: Complemental strand, 17347200 - 17347026
Alignment:
Q  172 tttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaac 271  Q
    ||||| |||||| || |||||||||||||||||||||||||||||| ||  |||||||| ||||||||||||| |||||||||||||| ||||||||| |    
T  17347200 tttgctagaagacacattttatgaaggtgtcttttagcaagttattatattagcatttgttaaaagacaccaactaatttttatgaagatgtcttttagc 17347101  T
Q  272 aaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||||||||||||||    | || ||||||||||||| |||||||||||| |||||||||    
T  17347100 aaagttataactaaaaagtggaaatcacaccttaaagtatggattgctaaaaaacaccttcatggatggcttcta 17347026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 156 - 343
Target Start/End: Original strand, 18102439 - 18102621
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    |||||||||||  |||||||| |||||| | |||||  |||||||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  18102439 atatataaaga--ggttttgctagaagatatcttttgcgaaggtgttttttagcaagttattctatgagcatttgttaaaagacaccaactaatttttat 18102536  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||      ||| || ||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||||| ||||||    
T  18102537 gaagg------ttagcagagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtgacttcta 18102621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 156 - 327
Target Start/End: Original strand, 18096319 - 18096485
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    |||||||||||  |||||||| |||||| | ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  18096319 atatataaaga--ggttttgctagaagacatcttttgtgaaggtgtcttttagcaagttattctatgagcatttgttaaaagacaccaactaatttttat 18096416  T
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacacct 327  Q
    |||||      ||| || ||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||    
T  18096417 gaagg------ttagcagagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacacct 18096485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 168 - 293
Target Start/End: Original strand, 9891371 - 9891496
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||| |||| |||    |||||| ||||||||||||| ||||||||||||| ||||||||    
T  9891371 gggttttgctagaagataccttttataaaggtgtcttttagcaaattatcctattgtcatttgttaaaagacaccaactaatttttatgaatgtgtcttt 9891470  T
Q  268 taacaaagttataactaaaaagtgga 293  Q
    || |||| ||||||||||||||||||    
T  9891471 tagcaaatttataactaaaaagtgga 9891496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 197 - 296
Target Start/End: Complemental strand, 19104409 - 19104310
Alignment:
Q  197 ggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaat 296  Q
    ||||||||||||||| ||||| || ||||||||| ||||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  19104409 ggtgtcttttagcaaattattttatgagcatttgttaaaagacaccaactaatttttacgaaggtgtgttttagcaaagttataactaaaaagtggaaat 19104310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 185 - 318
Target Start/End: Original strand, 9533380 - 9533519
Alignment:
Q  185 accttttatgaaggtgtcttttagcaagttattctac----gagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttata 280  Q
    |||||| |||||| |||||||||| |||||||||||     ||||||||| |||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  9533380 acctttaatgaagatgtcttttagtaagttattctatatatgagcatttgttaaaagacactaacaaatttttatgaaggtgtcttttaacaaagttata 9533479  T
Q  281 actaaaaagtggaaatcacac---gaggtgtggattgctaa 318  Q
    | | |||||||||||||||||   |||||||||||||||||    
T  9533480 a-ttaaaagtggaaatcacaccttgaggtgtggattgctaa 9533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 256 - 343
Target Start/End: Complemental strand, 29427304 - 29427214
Alignment:
Q  256 gaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||| |||| || |||| |||||||||    
T  29427304 gaaggtgtcttttagcaaagttataactaaaaagtggaaatcacaccttgaggtgtggattgctaaaaaacacatttatggctggcttcta 29427214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 222 - 343
Target Start/End: Complemental strand, 14975508 - 14975386
Alignment:
Q  222 gagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacacg---aggtgtggattgctaa 318  Q
    ||||||||  ||||||||||||| ||||||| |||||||||| ||||| |||| |||||||||||| ||| |||||| ||    |||||||| |||||||    
T  14975508 gagcattttttaaaagacaccaactaatttt-atgaaggtgttttttagcaaa-ttataactaaaaggtgaaaatcataccttaaggtgtgggttgctaa 14975411  T
Q  319 aagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||||||||||    
T  14975410 aagacaccttcatgggtggcttcta 14975386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 19143648 - 19143754
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttct--aa 344  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||||||   ||||| |||||| |||||||| |||||||||| ||||||||  ||    
T  19143648 ttttatgaaggtgtcttttagcaaa--tataactaaaaagtggaaatcacaccttgaggtatggatttctaaaagaaaccttcatggatggcttctagaa 19143745  T
Q  345 aaccctata 353  Q
    |||||||||    
T  19143746 aaccctata 19143754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 25090614 - 25090546
Alignment:
Q  233 aaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac 301  Q
    |||| ||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  25090614 aaaaaacaccaattaatttttatgaaggtgtctttcagcaaagttataactaaaaagtggaaatcacac 25090546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 201 - 343
Target Start/End: Original strand, 7190635 - 7190772
Alignment:
Q  201 tcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcaca 300  Q
    ||||||| ||||||||||||  || ||||  ||||||||||||| ||||||||||||||||||        |||||||| ||||||| ||| ||||||||    
T  7190635 tcttttatcaagttattctataagtatttattaaaagacaccaactaatttttatgaaggtgt--------aaagttatgactaaaaggtgaaaatcaca 7190726  T
Q  301 cg---aggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |    |||||||| ||||||||||||||||||||| ||||||||||    
T  7190727 ccttaaggtgtggtttgctaaaagacaccttcatgagtggcttcta 7190772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 32645707 - 32645794
Alignment:
Q  237 gacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaag 321  Q
    |||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||| |||| ||   ||||||||| ||||||||||    
T  32645707 gacaccaactaatttttatgaaagtgtcttttaacaaagttcttactaaaaagtggatatcataccttgaggtgtggcttgctaaaag 32645794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 24553286 - 24553235
Alignment:
Q  247 aatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatca 298  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  24553286 aatttttatgaaggtgttttttaataaagttataactaaaaagtggaaatca 24553235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 28295569 - 28295650
Alignment:
Q  250 ttttatgaaggtgtctttt---aacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacac 325  Q
    |||||||||||||||||||   |||||||||||||| |||||||||| |||||||   ||||||||| ||||||||||||||    
T  28295569 ttttatgaaggtgtctttttttaacaaagttataaccaaaaagtggatatcacaccttgaggtgtggcttgctaaaagacac 28295650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 28516504 - 28516423
Alignment:
Q  250 ttttatgaaggtgtctttt---aacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacac 325  Q
    |||||||||||||||||||   |||||||||||||| |||||||||| |||||||   ||||||||| ||||||||||||||    
T  28516504 ttttatgaaggtgtctttttttaacaaagttataaccaaaaagtggatatcacaccttgaggtgtggcttgctaaaagacac 28516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 19143616 - 19143671
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaa 211  Q
    ||||||| | || |||||||| |||||| |||||||||||||||||||||||||||    
T  19143616 atatatatatataggttttgctagaagataccttttatgaaggtgtcttttagcaa 19143671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 302 - 332
Target Start/End: Complemental strand, 19102105 - 19102075
Alignment:
Q  302 gaggtgtggattgctaaaagacaccttcatg 332  Q
    |||||||||||||||||||||||||||||||    
T  19102105 gaggtgtggattgctaaaagacaccttcatg 19102075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 29375231 - 29375269
Alignment:
Q  249 tttttatgaaggtgtcttttaacaaagttataactaaaa 287  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  29375231 tttttatgaagatgtcttttaataaagttataactaaaa 29375269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 8062086 - 8062130
Alignment:
Q  246 taatttttatgaaggtgtcttttaacaaagttataactaaaaagtg 291  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||    
T  8062086 taatttttataaaggtgtcttttaac-aagttataattaaaaagtg 8062130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 4e-62; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 188 - 344
Target Start/End: Complemental strand, 43939590 - 43939431
Alignment:
Q  188 ttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaa 287  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  43939590 ttttatgaaggtgtcttttagcaagttattctatgagcatttgttaaaagacaccaattaatttttatgaaggtgtcttttaacaaaattataactaaaa 43939491  T
Q  288 agtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttctaa 344  Q
    |||| |||||||||   ||||||||||||||||||||||||||||||| |||||||||||    
T  43939490 agtgaaaatcacaccttgaggtgtggattgctaaaagacaccttcatgagtggcttctaa 43939431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 185 - 343
Target Start/End: Complemental strand, 24993006 - 24992845
Alignment:
Q  185 accttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataacta 284  Q
    ||||||||||||||||||||||||||| ||||| ||  |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24993006 accttttatgaaggtgtcttttagcaaattattatattagcatttgttaaaagacaccaactaatttttatgaaggtgtcttttaacaaagttataacta 24992907  T
Q  285 aaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||    
T  24992906 aaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttcta 24992845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 156 - 343
Target Start/End: Complemental strand, 1838831 - 1838640
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||| ||||||  |||||| || ||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  1838831 atatatatatatgagttttgttagaagacacattttatgaaagtgtcttttagtaagttattctatgagcatttgctaaaagacaccaactaatttttat 1838732  T
Q  256 gaaggtgtcttttaac-aaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||| ||||||||||    
T  1838731 gaaggtgtcttttagcaaaagttataactaaaaagtggaaatcacacattgaggtgtgggttgctaaaagacaccttcatgagtggcttcta 1838640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 188 - 337
Target Start/End: Complemental strand, 25671115 - 25670968
Alignment:
Q  188 ttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaa 287  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25671115 ttttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaactaatttttatgaaggtgtcttttaacaaagttataactaaaa 25671016  T
Q  288 agtggaaatcacacgaggtgtggattgctaaaagacaccttcatgggtgg 337  Q
    |||| |||| | |  ||||| || ||||||||||||||||||||||||||    
T  25671015 agtgaaaattata--aggtgcgggttgctaaaagacaccttcatgggtgg 25670968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 168 - 343
Target Start/End: Complemental strand, 30414260 - 30414082
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||| | ||||||||||||||||| ||||||||||||||| ||  |||||||| ||||||||||||| ||||||||||||||||||||||    
T  30414260 gggttttgctagaatacaccttttatgaaggtgttttttagcaagttattatattagcatttgttaaaagacaccaactaatttttatgaaggtgtcttt 30414161  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    || |||||||||||||||||| ||||||| ||||   ||| ||||| ||||||||||||||||||||||||||||||||    
T  30414160 tagcaaagttataactaaaaaatggaaataacaccttgagatgtgggttgctaaaagacaccttcatgggtggcttcta 30414082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 169 - 343
Target Start/End: Complemental strand, 25825455 - 25825278
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||  |||||| ||||||||||||||||||||||||||||||||| || ||||||||| |||||||||| || ||||||||||| ||||| ||||     
T  25825455 ggttttgttagaagacaccttttatgaaggtgtcttttagcaagttattttatgagcatttgttaaaagacacaaactaatttttatggaggtgcctttc 25825356  T
Q  269 aacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    | |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||| |||||||||    
T  25825355 agcaaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttcta 25825278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 170 - 343
Target Start/End: Complemental strand, 1627830 - 1627655
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||||| ||||||||| ||| |||||||||||||||||||||| || ||||||||||||||||| || ||| ||||||||||||||||||||    
T  1627830 gttttgctagaagacaccttttataaagatgtcttttagcaagttattctatgaacatttgctaaaagacac-aactaacttttatgaaggtgtctttta 1627732  T
Q  270 acaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
     |||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||||||||| ||||||    
T  1627731 gcaaagttataactaaaaagtggaaatcacaccttgaggtgtgggttactaaaagacaccttcatgggtgacttcta 1627655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 171 - 344
Target Start/End: Original strand, 14463321 - 14463497
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaa 270  Q
    |||||| |||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||    
T  14463321 ttttgctagaagacaccttttatgaaggtgttttttagcaagttattctatgagcatttgctaaaagacactaactaatttttatgaaggtgtcttttaa 14463420  T
Q  271 caaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttctaa 344  Q
    ||||||||||| |||||| || |||||||||    || ||||||||| |||||||||||||||||| || |||||||    
T  14463421 caaagttataagtaaaaaatgaaaatcacacattaagatgtggattgttaaaagacaccttcatggatgacttctaa 14463497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 169 - 343
Target Start/End: Complemental strand, 2965019 - 2964842
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||| |||||| ||| |||||||||||||||| ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||     
T  2965019 ggttttgctagaagacaccgtttatgaaggtgtcttctagcaagttattctatgaacatttgctaaaagacaccaactaatttttatgaaggtgtcttta 2964920  T
Q  269 aacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    | |||| ||||||||||||||||||||| ||||   ||| |||||||||||||||||||| || || |||||||||||    
T  2964919 agcaaaattataactaaaaagtggaaatgacaccttgagatgtggattgctaaaagacacttttataggtggcttcta 2964842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 166 - 331
Target Start/End: Original strand, 44720062 - 44720229
Alignment:
Q  166 atgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtct 265  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||| ||| ||||||||||| ||||||||    
T  44720062 atgggttttgttagaagacaccttttatgaaggtgtcttttagcaagttattctattagcaattggtaaaagacatcaactaatttttatg-aggtgtct 44720160  T
Q  266 tttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcat 331  Q
    |||||||||||||||||||||||||| |||||||||    |||||||  ||||||||||||||||||||    
T  44720161 tttaacaaagttataactaaaaagtgaaaatcacaccttaaggtgtgagttgctaaaagacaccttcat 44720229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 168 - 301
Target Start/End: Original strand, 1406708 - 1406841
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| || |||||||||||||||||||||||| |||||||| || |||||| ||||||||||| | |||||||| |||||||||||||    
T  1406708 gggttttgctagaagacacattttatgaaggtgtcttttagcaaattattctatgaacatttggtaaaagacaccgactaatttttgtgaaggtgtcttt 1406807  T
Q  268 taacaaagttataactaaaaagtggaaatcacac 301  Q
    || |||||||||||||||||||||||||||||||    
T  1406808 tagcaaagttataactaaaaagtggaaatcacac 1406841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 209 - 343
Target Start/End: Complemental strand, 10769886 - 10769749
Alignment:
Q  209 caagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gagg 305  Q
    ||||||||||||  |||||||||||||||||||||| ||||||||||||||||| |||||| | |||||||||||||||||||||||||||||    |||    
T  10769886 caagttattctataagcatttgctaaaagacaccaactaatttttatgaaggtgccttttatccaagttataactaaaaagtggaaatcacaccttcagg 10769787  T
Q  306 tgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  10769786 tgtggattgctataaggcaccttcatgggtggcttcta 10769749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 168 - 298
Target Start/End: Complemental strand, 7336216 - 7336086
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| || |||||| ||||||||||||||||| ||| ||||  |||||||| ||||||||||||| ||||||||||||||||||||||    
T  7336216 gggttttgctagaagacacattttattaaggtgtcttttagcaaattactctataagcatttgttaaaagacaccaattaatttttatgaaggtgtcttt 7336117  T
Q  268 taacaaagttataactaaaaagtggaaatca 298  Q
    || ||||||||||||||||||||| ||||||    
T  7336116 tagcaaagttataactaaaaagtgaaaatca 7336086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 171 - 337
Target Start/End: Original strand, 9005430 - 9005597
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaag--gtgtctttt 268  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||    |||||| |||||||  |||||||||    
T  9005430 ttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatcagcatttgttaaaagacac----taatttctatgaaggtgtgtctttt 9005525  T
Q  269 aacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtgg 337  Q
    | |||| |||||||||||||||| |||||||||   |||||| ||||||||||||||||  |||||||||||    
T  9005526 agcaaaattataactaaaaagtgaaaatcacaccttgaggtgcggattgctaaaagacatattcatgggtgg 9005597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 170 - 344
Target Start/End: Complemental strand, 26213855 - 26213678
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||||| || ||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||| ||| |||| ||||| || ||||||||||    
T  26213855 gttttgctagaagacacattttacgaaggtgtcttttagcaagttattctatgagcatttgttaaaaaacatcaactaatatttataaatgtgtctttta 26213756  T
Q  270 acaaagttataactaaaaagtggaaatcaca---cgaggtgtggattgctaaaagacaccttcatgggtggcttctaa 344  Q
    |||||||||||| |||||||||  | |||||    ||||||| | ||||||||||||||||| || ||||||||||||    
T  26213755 acaaagttataattaaaaagtgagagtcacagcttgaggtgtcggttgctaaaagacacctttataggtggcttctaa 26213678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 210 - 343
Target Start/End: Complemental strand, 8549678 - 8549542
Alignment:
Q  210 aagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggt 306  Q
    |||||||||||  |||||||| |||||||||| || |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||   |||||    
T  8549678 aagttattctattagcatttgttaaaagacactaactaatttttatgaaggtgttttttagcaaagttataactaaaaagtgaaaatcacaccttgaggt 8549579  T
Q  307 gtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||| |||||||||| |||| ||||||    
T  8549578 gtggattgctaaaatacaccttcataggtgacttcta 8549542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 40460990 - 40461112
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtt 277  Q
    |||||| || |||||||||||||||||||||||||||||| || || |||||| ||||||||||||| ||||||||||||| || |||||||  ||||||    
T  40460990 agaagacactttttatgaaggtgtcttttagcaagttattatatgaacatttgttaaaagacaccaagtaatttttatgaaagtatcttttagtaaagtt 40461089  T
Q  278 ataactaaaaagtggaaatcaca 300  Q
    |||||||||||||||||||||||    
T  40461090 ataactaaaaagtggaaatcaca 40461112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 171 - 334
Target Start/End: Original strand, 5226801 - 5226967
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaa 270  Q
    |||||| | |||| || |||||||||||||||||||| ||||||||| || ||| ||||| ||||| ||||||| |||||||||||||||||| ||||||    
T  5226801 ttttgctaaaagacacattttatgaaggtgtcttttaacaagttattatatgagtatttgttaaaaaacaccaactaatttttatgaaggtgtgttttaa 5226900  T
Q  271 caaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatggg 334  Q
    ||||| |||||| ||||||||||||||||||    | || |||||||||||||||||  ||||||||    
T  5226901 caaagatataaccaaaaagtggaaatcacaccctaatgtttggattgctaaaagacaaattcatggg 5226967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 156 - 277
Target Start/End: Complemental strand, 17453066 - 17452945
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttat 255  Q
    ||||||| | ||||||||| |  ||||| || ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| |    
T  17453066 atatatatatatgggttttactcgaagacactttttatgaaggtgtcttttagcaagctattctatgagcatttgctaaaagacaccaactaatttttgt 17452967  T
Q  256 gaaggtgtcttttaacaaagtt 277  Q
    |||||||||||||| |||||||    
T  17452966 gaaggtgtcttttagcaaagtt 17452945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 227 - 343
Target Start/End: Original strand, 26897311 - 26897429
Alignment:
Q  227 tttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagac 323  Q
    |||||||||||||||||| |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||    |||||||| |||||||||| |    
T  26897311 tttgctaaaagacaccaactaatttttatgaagatgttttttagcaaagttataactaaaaagtggaaatcacaccttaaggtgtgg-ttgctaaaagtc 26897409  T
Q  324 accttcatgggtggcttcta 343  Q
    ||||||||||||||||||||    
T  26897410 accttcatgggtggcttcta 26897429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 188 - 291
Target Start/End: Original strand, 42470775 - 42470878
Alignment:
Q  188 ttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaa 287  Q
    |||||||||| |||  |||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||    
T  42470775 ttttatgaagatgtgctttaacaagttattctatgagcatttgctaaaagacaccaactaatttttatgaaggtgtcttttaacaaaattataattaaaa 42470874  T
Q  288 agtg 291  Q
    ||||    
T  42470875 agtg 42470878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 171 - 336
Target Start/End: Original strand, 17168157 - 17168325
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaa 270  Q
    |||||| |||||| |||  |||||||||||||||||| ||||||||||||   |||||||||||||||||| |  ||||||||||||||||||||||||     
T  17168157 ttttgctagaagacaccaattatgaaggtgtcttttaacaagttattctatatgcatttgctaaaagacactagttaatttttatgaaggtgtcttttag 17168256  T
Q  271 caaagttataactaaaaagtgga-aatcaca---cgaggtgtggattgctaaaagacaccttcatgggtg 336  Q
    | |||||||||||||||| | || |||||||    ||||||||||||| |||||||||| ||||| ||||    
T  17168257 c-aagttataactaaaaaattgataatcacattttgaggtgtggattgttaaaagacacattcataggtg 17168325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 47921562 - 47921684
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaa 270  Q
    |||||| ||||||  |||||||||||||||| ||||| |||||||| |||    |||||| ||||||| ||||| ||||||||||||||||||||||||     
T  47921562 ttttgctagaagacgccttttatgaaggtgttttttaacaagttatcctattgacatttgttaaaagataccaattaatttttatgaaggtgtcttttag 47921661  T
Q  271 caaagttataactaaaaagtgga 293  Q
    |||||||||||||||||||||||    
T  47921662 caaagttataactaaaaagtgga 47921684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 241 - 333
Target Start/End: Original strand, 42470572 - 42470667
Alignment:
Q  241 ccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgg 333  Q
    |||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||||    
T  42470572 ccaactaatttttatgaatgtatcttttaacaaagttataactaaaaagtggaaatcacaccttgaggtgtgaattgctaaaagacaccttcatgg 42470667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 15661211 - 15661119
Alignment:
Q  194 gaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaa 286  Q
    |||||||| ||||||||||||||| ||  |||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  15661211 gaaggtgttttttagcaagttattttataagcatttgttaaaagacaccaactaatttttatgaaggtgtcttttagcaaagttataactaaa 15661119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 246 - 332
Target Start/End: Original strand, 49660364 - 49660453
Alignment:
Q  246 taatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcaca---cgaggtgtggattgctaaaagacaccttcatg 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||  |||||||||||||||||||||    
T  49660364 taatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacaacttgaggtgtgagttgctaaaagacaccttcatg 49660453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 1469771 - 1469675
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||   ||||||||| |||||||||||||| |||||||||||||||||    
T  1469771 ttttatgaaggtgtcttttagaaaagctataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacacattcatgggtggcttcta 1469675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 254 - 343
Target Start/End: Complemental strand, 26284579 - 26284487
Alignment:
Q  254 atgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||   ||||||||||||| ||||||||| ||||||||||||||||||    
T  26284579 atgaaggtgtcttttagcaaagttataactaaaaagtgaaaatcacaccttgaggtgtggattgttaaaagacatcttcatgggtggcttcta 26284487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 171 - 268
Target Start/End: Complemental strand, 30819668 - 30819571
Alignment:
Q  171 ttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||| |||||| ||||||||||||||||| ||||||||| |||| |||   ||||||||||||||||||||| |||||||||||||||||||||||    
T  30819668 ttttgctagaagacaccttttatgaaggtgttttttagcaaattatcctataggcatttgctaaaagacaccaactaatttttatgaaggtgtctttt 30819571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 250 - 343
Target Start/End: Original strand, 26842829 - 26842925
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||||||   ||||||||| |||||||||||| |||| ||||||||||||||    
T  26842829 ttttatgaaagtgtcttttagcaaagttataactaaaaaatggaaatcacacattgaggtgtgggttgctaaaagacgcctttatgggtggcttcta 26842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 4105587 - 4105669
Alignment:
Q  253 tatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatg 332  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||    |||| || ||||||||||||||| ||||||    
T  4105587 tatgaaggtgtcttttagcaaagttataactaaaaagtgaaaatcacacattaaggtatgaattgctaaaagacactttcatg 4105669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 41146551 - 41146624
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataattt 251  Q
    |||||| || ||||||||| |||| ||||| |||||||||||| ||||||||||||||| ||||||| ||||||    
T  41146551 agaagacactttttatgaaagtgttttttaccaagttattctatgagcatttgctaaaaaacaccaactaattt 41146624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 198 - 343
Target Start/End: Original strand, 6813855 - 6814005
Alignment:
Q  198 gtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatc 297  Q
    ||||||||||  ||||||||||| ||| ||||  |||||||||  || ||| ||||| |||||| |||||||  |||||||||| ||||||||| |||||    
T  6813855 gtgtcttttaataagttattctatgagtattttttaaaagacataaactaa-ttttacgaaggtatcttttagtaaagttataagtaaaaagtgaaaatc 6813953  T
Q  298 acac---gaggtgtggattgctaaaagaca---ccttcatgggtggcttcta 343  Q
    | ||   |||| |||||||| |||||||||   ||||||| |||||||||||    
T  6813954 atactttgaggcgtggattgttaaaagacacatccttcataggtggcttcta 6814005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 15660897 - 15660856
Alignment:
Q  302 gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  15660897 gaggtgtgggttgctaaaagacaccttcatgggtggcttcta 15660856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 49659890 - 49659959
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaag 237  Q
    ||||||||  |||||| |||||| |||||||||| |||||||||||||||||| || |||||| ||||||    
T  49659890 gggttttgttagaagacacctttcatgaaggtgttttttagcaagttattctatgaacatttgttaaaag 49659959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 1469803 - 1469751
Alignment:
Q  156 atatataaagatgggttttgcgagaagaaaccttttatgaaggtgtcttttag 208  Q
    ||||||| | ||||||||||| |||||| ||||||||||||||||||||||||    
T  1469803 atatatatatatgggttttgctagaagacaccttttatgaaggtgtcttttag 1469751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 48875160 - 48875086
Alignment:
Q  272 aaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||| |||||||||    ||||||||| ||||||||||| ||||| |||||| |||||||    
T  48875160 aaagttataactaaaaagtagaaatcacaacttgaggtgtgggttgctaaaagaaacctttatgggttgcttcta 48875086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 257 - 330
Target Start/End: Complemental strand, 38509713 - 38509637
Alignment:
Q  257 aaggtgtcttttaacaaagttataactaaaaagtgga-aatcacac---gaggtgtggattgctaaaagacaccttca 330  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||   ||||||| |||||||||||||||||||||    
T  38509713 aaggtgtcttttatcat-gttataactaaaaagtggataatcacacattgaggtgtagattgctaaaagacaccttca 38509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 38509779 - 38509712
Alignment:
Q  167 tgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaa 234  Q
    |||||||||  |||||| || |||||||||||||||||||||||| |||| |||  ||||||||||||    
T  38509779 tgggttttgttagaagacacattttatgaaggtgtcttttagcaaattatcctataagcatttgctaa 38509712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 10835604 - 10835664
Alignment:
Q  225 catttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaa 286  Q
    |||||||||||||||||||| ||||||||||||| |||| || || |||| |||||||||||    
T  10835604 catttgctaaaagacaccaactaatttttatgaaagtgtgttctagcaaa-ttataactaaa 10835664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 9679714 - 9679786
Alignment:
Q  167 tgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagac 239  Q
    |||||||||| |||||| | | ||| ||||||||||||||||||||||||  ||   ||||||||||||||||    
T  9679714 tgggttttgctagaagacatcctttttgaaggtgtcttttagcaagttatcatatatgcatttgctaaaagac 9679786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 30289102 - 30289030
Alignment:
Q  188 ttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaagg 260  Q
    ||||||||||| |||||||| ||||||||| || ||  ||||| |||||| |||||| || ||||||||||||    
T  30289102 ttttatgaaggcgtcttttaacaagttattttatgaatatttgttaaaaggcaccaactattttttatgaagg 30289030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 9338818 - 9338886
Alignment:
Q  265 ttttaacaaagt--tataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacacctt 328  Q
    ||||||||||||  |||||||||||||| ||||||||||   || |||||| |||||||||||||||||    
T  9338818 ttttaacaaagtattataactaaaaagtagaaatcacaccttgaagtgtgggttgctaaaagacacctt 9338886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 26284602 - 26284560
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaa 211  Q
    |||||||| |||||| |||||| ||||||||||||||||||||    
T  26284602 ggttttgcaagaagacacctttcatgaaggtgtcttttagcaa 26284560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 20201672 - 20201713
Alignment:
Q  249 tttttatgaaggtgtcttttaacaaagttataactaaaaagt 290  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||    
T  20201672 tttttattaaggtgtcttttagcaaagatataactaaaaagt 20201713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 113; Significance: 9e-57; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 392404 - 392582
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  392404 gggttttgctagaagacaccttttatgaagatgtcttttagcaagttattctatgagcatttgctaaaagacaccaactaattattatgaaggtgtcttt 392503  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    || ||||  |||||||||||||||||||||||||    |||||||| |||||||||||||||||| | |||||||||||    
T  392504 tagcaaatgtataactaaaaagtggaaatcacaccttaaggtgtgggttgctaaaagacaccttcgtaggtggcttcta 392582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 35052 - 35206
Alignment:
Q  168 gggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttt 267  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||||    
T  35052 gggttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgagcatttgctaagagacaccgactaatttttatgaaggtgtcttt 35151  T
Q  268 taacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaa 319  Q
    || ||||||||||||||||||||| |||||||||   ||||||||||||||||||    
T  35152 tagcaaagttataactaaaaagtgaaaatcacaccttgaggtgtggattgctaaa 35206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 173 - 340
Target Start/End: Original strand, 9155 - 9324
Alignment:
Q  173 ttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaaca 272  Q
    |||| |||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||| ||    
T  9155 ttgctagaagacaccttttatgaaggtgtattttagcaagttattctatgagcatttgctaaaagataccaactaa-ttttatgaaggtgtcttttagca 9253  T
Q  273 aagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggctt 340  Q
    || ||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||| ||||||    
T  9254 aaattataactaaaaagtggaaatcacaccttgaggtgtggattgcgaaaagacaccttcatggatggctt 9324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 97; Significance: 3e-47; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 121771 - 121613
Alignment:
Q  188 ttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaa 287  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||| | |||||||| |||| ||||||||||||    
T  121771 ttttatgaaggtgtcttttaacaagttattctatgagcatttgctaaaagacaccaattaatttttatgaatgagtcttttagcaaaattataactaaaa 121672  T
Q  288 agtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||   ||  | ||||||||||||| ||||||||||| ||||||||||    
T  121671 agtggaaatcacaccttgaaatatggattgctaaaaaacaccttcatgagtggcttcta 121613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 91; Significance: 1e-43; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 210 - 343
Target Start/End: Complemental strand, 94924 - 94789
Alignment:
Q  210 aagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggt 306  Q
    ||||||||||| ||| ||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||    
T  94924 aagttattctatgag-atttgttaaaagacaccaactaatttttatgaaggtgtcttttagcaaagttataactaaaaagtggaaatcacaccttgaggt 94826  T
Q  307 gtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||| |||||||||||||||||||||| |||||||||    
T  94825 gtgggttgctaaaagacaccttcatggatggcttcta 94789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 178 - 298
Target Start/End: Original strand, 478318 - 478438
Alignment:
Q  178 agaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagtt 277  Q
    |||||| || |||||||||||||| |||||||||||||||||| || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  478318 agaagacactttttatgaaggtgttttttagcaagttattctatgaacatttgttaaaagacaccaactaatttttatgaaggtgtcttttaacaaagtt 478417  T
Q  278 ataactaaaaagtggaaatca 298  Q
    |||||||||||||| ||||||    
T  478418 ataactaaaaagtgaaaatca 478438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 169 - 301
Target Start/End: Complemental strand, 231286 - 231154
Alignment:
Q  169 ggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttt 268  Q
    |||||||| |||||| || |||||||||||||||||||| ||| |||||||| || |||||| ||||||| ||||| ||||||||||||||||||||| |    
T  231286 ggttttgctagaagacacattttatgaaggtgtcttttaacaaattattctatgaacatttgttaaaagataccaactaatttttatgaaggtgtcttat 231187  T
Q  269 aacaaagttataactaaaaagtggaaatcacac 301  Q
    ||||||||||||| |||||||||||||||||||    
T  231186 aacaaagttataattaaaaagtggaaatcacac 231154  T

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Target: scaffold0086 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 8604 - 8508
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||    
T  8604 ttttatgaagttgtcttttaacaaagttataactaaaaagtggaaatcacaccttcaggtgtggattgctaaaagacaccttcatgggtggcttcta 8508  T

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Target: scaffold0246 (Bit Score: 73; Significance: 6e-33; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 17796 - 17962
Alignment:
Q  180 aagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttat 279  Q
    |||| ||||||||||||  ||| |||||| || ||| || |  | |||||| ||||||||| ||| |||||||||||||||||| ||||| |||||||||    
T  17796 aagacaccttttatgaatatgttttttagtaatttactcaattaacatttgttaaaagacatcaactaatttttatgaaggtgttttttagcaaagttat 17895  T
Q  280 aactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||||||||||||||||||   |||| |||  ||||||||||||||||||||||||| ||||||    
T  17896 aactaaaaagtggaaatcacaccttgaggcgtgagttgctaaaagacaccttcatgggtgacttcta 17962  T

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Target: scaffold0057 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 75002 - 75099
Alignment:
Q  249 tttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggcttcta 343  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||||||||||   | ||| ||| ||||||||| ||||||||||||||||||||||    
T  75002 tttttattaaggtgtcttttagtaaagttataactaaaaagtggaaatcacaccttggggtatgggttgctaaaatacaccttcatgggtggcttcta 75099  T

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Target: scaffold0009 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 49821 - 49934
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtctttta 269  Q
    ||||||| |||||  |||||||||||| || ||||||||||||||||| || || |||||| ||||| | ||||| |||||||||| || ||||||||||    
T  49821 gttttgctagaagccaccttttatgaatgtatcttttagcaagttattttatgaacatttgttaaaa-ataccaattaatttttataaatgtgtctttta 49919  T
Q  270 acaaagttataacta 284  Q
    |||||||||||||||    
T  49920 acaaagttataacta 49934  T

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Target: scaffold0091 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 3748 - 3848
Alignment:
Q  201 tcttttagcaagttattct-acgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcac 299  Q
    ||||||||||||||||| | |  |||||||| ||| ||||||||| |||||||||||||||||| ||||| ||||||||||||||||||  |||||||||    
T  3748 tcttttagcaagttatttttattagcatttgttaatagacaccaactaatttttatgaaggtgt-ttttagcaaagttataactaaaaaaaggaaatcac 3846  T
Q  300 ac 301  Q
    ||    
T  3847 ac 3848  T

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Target: scaffold0003 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 173 - 336
Target Start/End: Complemental strand, 103399 - 103232
Alignment:
Q  173 ttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaaataatttttatgaaggtgtcttttaaca 272  Q
    |||| |||||| ||| ||||||||||||| |||||| |||||||  ||    |||||||||||||||||||| ||| |||||||||||||| |||| |      
T  103399 ttgctagaagacaccctttatgaaggtgttttttagtaagttatcttatagacatttgctaaaagacaccaactaacttttatgaaggtgt-tttttagg 103301  T
Q  273 aagttataactaaaaagtgga-aatcaca---cgaggtgtggattgct-aaaagacaccttcatgggtg 336  Q
    |||||||||||||||||| || |||||||    ||||||||| || || |||| |||||||||||||||    
T  103300 aagttataactaaaaagttgataatcacaacttgaggtgtggtttactaaaaaaacaccttcatgggtg 103232  T

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Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 88268 - 88218
Alignment:
Q  166 atgggttttgcgagaagaaaccttttatgaaggtgtcttttagcaagttat 216  Q
    ||||||||||| |||||| ||| |||||||||||||||||||| |||||||    
T  88268 atgggttttgctagaagataccctttatgaaggtgtcttttaggaagttat 88218  T

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Target: scaffold0112 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 340
Target Start/End: Complemental strand, 35975 - 35882
Alignment:
Q  250 ttttatgaaggtgtcttttaacaaagttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcatgggtggctt 340  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||| |||||   |||||||  |||||||||| |||||||||| | ||||||    
T  35975 ttttatgaaggtgtcttttagcaaaattataactaaaaagtagaaaacacacctggaggtgttaattgctaaaaaacaccttcatagatggctt 35882  T

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Target: scaffold0112; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 35993 - 35952
Alignment:
Q  170 gttttgcgagaagaaaccttttatgaaggtgtcttttagcaa 211  Q
    ||||||| |||||| | |||||||||||||||||||||||||    
T  35993 gttttgctagaagacaacttttatgaaggtgtcttttagcaa 35952  T

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Target: scaffold0007 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 77027 - 77099
Alignment:
Q  172 tttgcgagaagaaaccttttatgaaggtgtcttttagcaagttattctacgagcatttgctaaaagacaccaa 244  Q
    ||||| |||||| ||  ||||||||||||| |||||||||||||||||   | ||||||||||||||||||||    
T  77027 tttgctagaagacactatttatgaaggtgttttttagcaagttattctgtaaacatttgctaaaagacaccaa 77099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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