View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19929_high_94 (Length: 246)
Name: NF19929_high_94
Description: NF19929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19929_high_94 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 45641424 - 45641189
Alignment:
| Q |
1 |
cattcaatcaatgattcaatatgtggattgcattctttggaacaaaaatcattcttctctaataaactcttcaacatagaatgagtaaatttaggatcat |
100 |
Q |
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| T |
45641424 |
cattcaatcaatgattcaatatgtggattgcattctttggaacaaaaatcattcttctctaataaactcttcaacatagaatgagtaaatttaggatcat |
45641325 |
T |
|
| Q |
101 |
tagggtcactaccagttgacccattagggttttccaatacatttggacgcgaaaaacaaaacttgcaaccaaatccatttcgagtagtagtactattatg |
200 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45641324 |
tagggtcactactagttgacccattagggttttccaatacatttggacgcgaaaaacaaaacttgcaaccaaatccatttcgagtagtagtactattatg |
45641225 |
T |
|
| Q |
201 |
accctcaccttgaataatcaccaccttacctatgct |
236 |
Q |
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||||||||||||||||||||||||||||||| |||| |
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| T |
45641224 |
accctcaccttgaataatcaccaccttacctctgct |
45641189 |
T |
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