View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19929_low_19 (Length: 537)

Name: NF19929_low_19
Description: NF19929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19929_low_19
NF19929_low_19
[»] chr8 (35 HSPs)
chr8 (288-537)||(40109572-40109818)
chr8 (50-228)||(40109333-40109498)
chr8 (358-463)||(13335150-13335255)
chr8 (360-463)||(39405697-39405801)
chr8 (362-454)||(42182016-42182107)
chr8 (362-463)||(11977013-11977115)
chr8 (359-439)||(4428452-4428531)
chr8 (362-463)||(10180024-10180126)
chr8 (358-463)||(17719335-17719441)
chr8 (358-439)||(26626213-26626295)
chr8 (358-439)||(39301057-39301139)
chr8 (360-439)||(45425767-45425848)
chr8 (356-463)||(15675367-15675474)
chr8 (362-439)||(50753-50831)
chr8 (358-455)||(5053238-5053335)
chr8 (358-439)||(22771936-22772018)
chr8 (360-439)||(40028446-40028527)
chr8 (393-454)||(7172883-7172944)
chr8 (360-463)||(29226605-29226708)
chr8 (358-439)||(36006988-36007072)
chr8 (364-439)||(1875840-1875916)
chr8 (362-463)||(31231667-31231769)
chr8 (358-439)||(36967307-36967388)
chr8 (358-434)||(2767403-2767480)
chr8 (358-463)||(9300190-9300298)
chr8 (362-437)||(396714-396790)
chr8 (358-463)||(39482545-39482654)
chr8 (358-436)||(41091930-41092007)
chr8 (358-463)||(44761571-44761675)
chr8 (394-463)||(4924144-4924214)
chr8 (358-463)||(34948764-34948868)
chr8 (362-439)||(14855035-14855115)
chr8 (391-439)||(17654530-17654578)
chr8 (423-463)||(21649438-21649478)
chr8 (404-436)||(39890614-39890646)
[»] chr1 (45 HSPs)
chr1 (358-463)||(37506057-37506163)
chr1 (359-463)||(39864045-39864150)
chr1 (360-463)||(7759150-7759254)
chr1 (358-436)||(12039015-12039094)
chr1 (358-439)||(6785189-6785271)
chr1 (358-431)||(17988856-17988930)
chr1 (358-463)||(33733341-33733447)
chr1 (362-439)||(34031630-34031708)
chr1 (358-439)||(35682897-35682978)
chr1 (358-463)||(49224065-49224171)
chr1 (358-440)||(23169095-23169176)
chr1 (358-439)||(24991756-24991839)
chr1 (357-463)||(37177768-37177875)
chr1 (358-439)||(26093327-26093409)
chr1 (360-439)||(40144950-40145030)
chr1 (358-463)||(4659710-4659815)
chr1 (358-463)||(20209919-20210025)
chr1 (362-463)||(27721470-27721571)
chr1 (358-439)||(31042730-31042812)
chr1 (358-437)||(7351572-7351649)
chr1 (358-439)||(26252562-26252646)
chr1 (362-463)||(52429279-52429383)
chr1 (362-429)||(29074817-29074884)
chr1 (358-463)||(35367735-35367841)
chr1 (358-463)||(38787271-38787380)
chr1 (362-431)||(3312056-3312126)
chr1 (358-399)||(6160593-6160635)
chr1 (362-439)||(9379169-9379246)
chr1 (385-439)||(10587946-10588000)
chr1 (390-439)||(22856340-22856389)
chr1 (362-463)||(2572405-2572508)
chr1 (358-439)||(36701856-36701936)
chr1 (358-439)||(36717960-36718040)
chr1 (362-463)||(37539066-37539166)
chr1 (358-428)||(43500854-43500925)
chr1 (363-463)||(9307564-9307666)
chr1 (362-463)||(11449824-11449924)
chr1 (358-409)||(6268376-6268429)
chr1 (358-402)||(37238960-37239005)
chr1 (390-439)||(39395230-39395279)
chr1 (358-426)||(41121939-41122008)
chr1 (358-410)||(44426838-44426891)
chr1 (386-439)||(44707863-44707916)
chr1 (417-446)||(45118642-45118671)
chr1 (390-438)||(11642135-11642183)
[»] chr7 (50 HSPs)
chr7 (354-457)||(23745420-23745525)
chr7 (358-461)||(32346137-32346241)
chr7 (358-463)||(11373511-11373617)
chr7 (358-463)||(34947440-34947546)
chr7 (358-439)||(759198-759280)
chr7 (360-437)||(7457530-7457607)
chr7 (358-439)||(21760091-21760173)
chr7 (358-439)||(28202416-28202498)
chr7 (360-463)||(2459413-2459517)
chr7 (358-463)||(21350708-21350815)
chr7 (358-439)||(8592547-8592629)
chr7 (358-463)||(24516372-24516478)
chr7 (362-435)||(34100658-34100732)
chr7 (358-439)||(37245630-37245712)
chr7 (358-439)||(48608807-48608888)
chr7 (362-463)||(3178287-3178391)
chr7 (359-463)||(41506148-41506253)
chr7 (358-439)||(83324-83407)
chr7 (358-439)||(28103670-28103755)
chr7 (358-439)||(42935598-42935680)
chr7 (358-439)||(25571360-25571441)
chr7 (358-410)||(27920926-27920979)
chr7 (358-439)||(36790678-36790762)
chr7 (386-463)||(37490344-37490421)
chr7 (356-439)||(37850834-37850916)
chr7 (387-439)||(46478400-46478453)
chr7 (358-463)||(21390234-21390341)
chr7 (362-444)||(30107072-30107155)
chr7 (358-437)||(16904317-16904399)
chr7 (358-439)||(31930606-31930691)
chr7 (360-433)||(10042223-10042297)
chr7 (363-452)||(17610632-17610722)
chr7 (358-463)||(19271816-19271921)
chr7 (358-439)||(40076258-40076340)
chr7 (358-463)||(43873863-43873969)
chr7 (385-430)||(33932057-33932102)
chr7 (358-437)||(9785928-9786008)
chr7 (391-463)||(37490437-37490509)
chr7 (362-452)||(39519288-39519380)
chr7 (358-439)||(6495041-6495122)
chr7 (390-432)||(7348266-7348307)
chr7 (405-463)||(13906686-13906743)
chr7 (358-431)||(31327341-31327415)
chr7 (386-463)||(22738671-22738747)
chr7 (385-462)||(29121472-29121548)
chr7 (390-431)||(35016384-35016425)
chr7 (358-429)||(42795931-42796006)
chr7 (390-462)||(14063276-14063347)
chr7 (390-462)||(14373304-14373375)
chr7 (415-455)||(30546446-30546486)
[»] chr3 (34 HSPs)
chr3 (358-461)||(44301494-44301599)
chr3 (362-463)||(37311886-37311989)
chr3 (358-439)||(10366749-10366831)
chr3 (358-439)||(30711007-30711088)
chr3 (358-460)||(51838038-51838142)
chr3 (358-463)||(43253939-43254046)
chr3 (358-463)||(53560149-53560256)
chr3 (358-439)||(36460516-36460598)
chr3 (358-463)||(36476517-36476623)
chr3 (363-463)||(39043833-39043932)
chr3 (358-425)||(43715239-43715307)
chr3 (358-439)||(19822944-19823026)
chr3 (358-463)||(33458982-33459086)
chr3 (402-454)||(25108610-25108662)
chr3 (356-442)||(34302340-34302427)
chr3 (358-441)||(9022578-9022660)
chr3 (358-460)||(27471268-27471371)
chr3 (352-402)||(30710576-30710627)
chr3 (358-463)||(37497424-37497531)
chr3 (358-439)||(3901249-3901331)
chr3 (362-439)||(11905760-11905837)
chr3 (358-439)||(12904797-12904879)
chr3 (358-463)||(30190736-30190842)
chr3 (358-427)||(37804671-37804740)
chr3 (386-439)||(8679154-8679206)
chr3 (370-463)||(37695742-37695837)
chr3 (360-439)||(38137546-38137626)
chr3 (362-463)||(27549361-27549464)
chr3 (358-436)||(42469784-42469861)
chr3 (390-449)||(45811590-45811648)
chr3 (360-439)||(3313187-3313269)
chr3 (358-439)||(17652686-17652767)
chr3 (358-452)||(37773051-37773148)
chr3 (356-463)||(40462252-40462358)
[»] chr2 (36 HSPs)
chr2 (358-439)||(35313820-35313902)
chr2 (362-455)||(43410363-43410457)
chr2 (358-463)||(17695261-17695369)
chr2 (358-442)||(36004887-36004971)
chr2 (358-463)||(28186147-28186253)
chr2 (358-463)||(14523446-14523552)
chr2 (362-463)||(5272213-5272314)
chr2 (358-439)||(5789746-5789827)
chr2 (358-439)||(34120535-34120617)
chr2 (360-439)||(25904722-25904803)
chr2 (358-455)||(7438934-7439033)
chr2 (358-463)||(3323346-3323452)
chr2 (358-439)||(9458364-9458445)
chr2 (358-463)||(36354517-36354622)
chr2 (360-460)||(16028251-16028351)
chr2 (360-439)||(16377758-16377833)
chr2 (358-439)||(7494936-7495019)
chr2 (358-463)||(37322362-37322467)
chr2 (358-439)||(23492804-23492886)
chr2 (360-441)||(38187979-38188060)
chr2 (390-439)||(28170681-28170730)
chr2 (391-463)||(39691457-39691529)
chr2 (411-463)||(43730603-43730654)
chr2 (360-410)||(11366719-11366770)
chr2 (358-439)||(25637413-25637496)
chr2 (358-424)||(34120634-34120701)
chr2 (356-398)||(34451471-34451514)
chr2 (376-431)||(43730352-43730407)
chr2 (356-439)||(45235510-45235596)
chr2 (360-463)||(8947126-8947232)
chr2 (358-463)||(36794217-36794323)
chr2 (358-439)||(39785518-39785600)
chr2 (362-434)||(19444083-19444156)
chr2 (360-463)||(26863432-26863539)
chr2 (386-463)||(35242371-35242448)
chr2 (387-431)||(13435683-13435727)
[»] chr6 (27 HSPs)
chr6 (359-463)||(181491-181595)
chr6 (358-442)||(12307691-12307775)
chr6 (358-439)||(11656045-11656128)
chr6 (362-435)||(34299931-34300006)
chr6 (358-439)||(5302284-5302366)
chr6 (358-439)||(7920174-7920254)
chr6 (386-463)||(8695007-8695084)
chr6 (358-439)||(29363237-29363321)
chr6 (358-437)||(30716832-30716913)
chr6 (360-438)||(23397716-23397796)
chr6 (358-463)||(6801863-6801970)
chr6 (408-463)||(24983524-24983579)
chr6 (359-440)||(27367523-27367607)
chr6 (359-440)||(27457870-27457954)
chr6 (362-439)||(15582222-15582298)
chr6 (358-461)||(21010104-21010210)
chr6 (360-439)||(21425656-21425738)
chr6 (358-439)||(31894309-31894388)
chr6 (358-463)||(34657637-34657746)
chr6 (386-439)||(1517247-1517298)
chr6 (386-439)||(1519334-1519385)
chr6 (362-463)||(6834444-6834545)
chr6 (363-439)||(13909361-13909439)
chr6 (362-439)||(15058055-15058132)
chr6 (358-439)||(23142601-23142682)
chr6 (406-454)||(25418049-25418096)
chr6 (358-461)||(32440722-32440828)
[»] chr5 (28 HSPs)
chr5 (358-463)||(41496013-41496119)
chr5 (358-439)||(6315875-6315957)
chr5 (360-463)||(6753732-6753836)
chr5 (360-463)||(9515668-9515775)
chr5 (361-439)||(19929882-19929961)
chr5 (358-463)||(1248678-1248784)
chr5 (358-463)||(6753962-6754068)
chr5 (358-463)||(8725083-8725189)
chr5 (358-463)||(27542728-27542834)
chr5 (358-463)||(40899851-40899957)
chr5 (358-439)||(3348228-3348310)
chr5 (358-439)||(42803718-42803800)
chr5 (358-434)||(2588166-2588243)
chr5 (390-463)||(4440987-4441060)
chr5 (358-436)||(6615980-6616060)
chr5 (358-439)||(11796265-11796344)
chr5 (410-450)||(26662983-26663023)
chr5 (410-450)||(26934578-26934618)
chr5 (358-439)||(4818483-4818566)
chr5 (358-439)||(8698241-8698324)
chr5 (356-426)||(40616483-40616554)
chr5 (363-463)||(21060569-21060669)
chr5 (358-437)||(7330441-7330521)
chr5 (356-461)||(2232145-2232254)
chr5 (366-442)||(24455056-24455130)
chr5 (404-463)||(29374322-29374381)
chr5 (360-439)||(40530322-40530403)
chr5 (358-434)||(41062263-41062339)
[»] chr4 (48 HSPs)
chr4 (362-439)||(28911262-28911340)
chr4 (358-455)||(42616993-42617091)
chr4 (358-463)||(51624719-51624825)
chr4 (358-439)||(49428448-49428529)
chr4 (360-463)||(49746895-49747000)
chr4 (362-463)||(16821413-16821516)
chr4 (358-439)||(35380439-35380522)
chr4 (362-455)||(2653357-2653451)
chr4 (358-463)||(47773101-47773207)
chr4 (412-461)||(30260992-30261041)
chr4 (358-437)||(49176042-49176123)
chr4 (385-453)||(46385448-46385516)
chr4 (356-449)||(17512435-17512530)
chr4 (358-439)||(22129975-22130058)
chr4 (358-439)||(38405208-38405291)
chr4 (358-439)||(5841534-5841616)
chr4 (358-439)||(7061770-7061852)
chr4 (356-437)||(9301463-9301545)
chr4 (363-463)||(30682278-30682380)
chr4 (358-439)||(36985719-36985801)
chr4 (362-439)||(6609694-6609776)
chr4 (359-439)||(6643766-6643846)
chr4 (358-463)||(21240786-21240888)
chr4 (356-439)||(53412038-53412123)
chr4 (363-463)||(19265744-19265847)
chr4 (358-409)||(25233115-25233167)
chr4 (358-439)||(4972506-4972587)
chr4 (358-439)||(11907705-11907787)
chr4 (362-463)||(34360592-34360694)
chr4 (358-463)||(52859881-52859982)
chr4 (394-463)||(17237378-17237447)
chr4 (358-439)||(28500989-28501073)
chr4 (358-439)||(35311329-35311413)
chr4 (358-434)||(26147727-26147806)
chr4 (362-436)||(4739474-4739549)
chr4 (358-439)||(41711562-41711645)
chr4 (354-462)||(7986905-7987012)
chr4 (362-463)||(17114377-17114479)
chr4 (386-439)||(12728784-12728836)
chr4 (364-436)||(31096235-31096308)
chr4 (385-439)||(43237202-43237258)
chr4 (390-439)||(50442958-50443007)
chr4 (391-432)||(50872329-50872370)
chr4 (362-463)||(52247510-52247611)
chr4 (403-439)||(20612277-20612313)
chr4 (373-460)||(39157959-39158046)
chr4 (360-439)||(52868908-52868988)
chr4 (362-439)||(54202133-54202211)
[»] scaffold0095 (1 HSPs)
scaffold0095 (360-463)||(50139-50243)
[»] scaffold0159 (1 HSPs)
scaffold0159 (358-439)||(34119-34200)
[»] scaffold0003 (1 HSPs)
scaffold0003 (358-455)||(252888-252985)
[»] scaffold0015 (1 HSPs)
scaffold0015 (360-441)||(42813-42894)
[»] scaffold1809 (1 HSPs)
scaffold1809 (359-439)||(784-864)
[»] scaffold0328 (1 HSPs)
scaffold0328 (358-439)||(8081-8164)
[»] scaffold0330 (1 HSPs)
scaffold0330 (358-463)||(5325-5429)
[»] scaffold0016 (1 HSPs)
scaffold0016 (362-439)||(76229-76307)


Alignment Details
Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 288 - 537
Target Start/End: Original strand, 40109572 - 40109818
Alignment:
Q  288 aaagaatttaattaatataatacttagtttgtctcattttaattgtcaatttatnnnnnnnnn----ttatatatctcaaaataattgtcattttagaat 383  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||||||    
T  40109572 aaagaatttaattaatatattacttagtttgtctcattttaattgtcaatttagaaagaaaaaaaaattatatatctcaaaataattgtcattttagaat 40109671  T
Q  384 ataatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaacttnnnnnnnnnnnnnnnnnnn 483  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||                       
T  40109672 ataatgcaacatttattatatttttccactaatatattcttatttattgaatttcactctatttaactactctactaactt-------aaaaccaaaaaa 40109764  T
Q  484 nnnttattctactaactacaaatagttttagtaaattatactaattttactatt 537  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40109765 aaattattctactaactacaaatagttttagtaaattatactaattttactatt 40109818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 50 - 228
Target Start/End: Original strand, 40109333 - 40109498
Alignment:
Q  50 aacctcctcacaacatagaaaatgagtctcgtaatacggaattcaactgcgaggtaagaatgaaattgtttcaccatttaagaattgaattattctcctg 149  Q
    ||||||||| ||||||||||||||| ||| ||||||| || ||||||||||| |||||||||||||| |||||||||||||||||             ||    
T  40109333 aacctcctcgcaacatagaaaatgaatctggtaatacagagttcaactgcgaagtaagaatgaaattatttcaccatttaagaat-------------tg 40109419  T
Q  150 aattattcatcattggtaaatcctgaacgatttgtcattgatgaatctcatttaagttcaattgtttcgttaaccttca 228  Q
    |||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  40109420 aattattcgtaattggtaaatcctgaacgatttgtcattaatgaatctcatttaagttcaattatttcgttaaccttca 40109498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 13335150 - 13335255
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||| |||||||| || ||||| || |||||||||||||||    | |||||||||||    
T  13335150 tctcaaaataattgtcactttagaataccaatgcaacatttattat-tttttccattattataccctgatttattgaatttcatcaaacttaactactct 13335248  T
Q  457 actaact 463  Q
    |||||||    
T  13335249 actaact 13335255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 463
Target Start/End: Original strand, 39405697 - 39405801
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 458  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||  |||| ||||| ||||| |||||||||| ||||||| || | |||| ||||| ||    
T  39405697 tcaaaataattgtcactttagaatatcaatgcagcatttattattatttttcactattatacccttatttatttaatttcattcaacttaattactccac 39405796  T
Q  459 taact 463  Q
    |||||    
T  39405797 taact 39405801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 454
Target Start/End: Complemental strand, 42182107 - 42182016
Alignment:
Q  362 aaaataattgtcattttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactact 454  Q
    |||||||||||| |||||||||| |||||||||||||| || | ||| ||| ||| ||| ||||||||||||||| |||| ||||||||||||    
T  42182107 aaaataattgtcgttttagaatacaatgcaacatttataat-tattttcaccaatgtacccttatttattgaattccactatatttaactact 42182016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 11977115 - 11977013
Alignment:
Q  362 aaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactct-atttaactactctact 459  Q
    |||||||||||||||||| |||| ||||| | |||||||||| ||||||| ||| |||||  ||||||||||||||||| ||| | ||||||||||||||    
T  11977115 aaaataattgtcattttacaatactaatgtagcatttattatttttttccgctattatacctttatttattgaatttca-tctaacttaactactctact 11977017  T
Q  460 aact 463  Q
    ||||    
T  11977016 aact 11977013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 439
Target Start/End: Complemental strand, 4428531 - 4428452
Alignment:
Q  359 ctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||| |||||||||| |||| |||| |||||||  |||||||||| |||||| |||||||||||||||||    
T  4428531 ctcaaaataattgtcactttagaatatcaatgtaacaattattat--ttttccactattatacttttatttattgaatttca 4428452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 10180126 - 10180024
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 460  Q
    ||||||||||||| |||||||||  |||||||||||||||||  ||||| | || ||||| |||||| ||||||||||| || | |||||||||| ||||    
T  10180126 aaaataattgtcactttagaataccaatgcaacatttattattattttctattattatacacttattaattgaatttcattcaacttaactactccacta 10180027  T
Q  461 act 463  Q
    |||    
T  10180026 act 10180024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 17719441 - 17719335
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    |||| |||||||||||| |||||||||  ||||||||||||||||| |||||||| || |||||  ||||||||| |||||||  | | ||||||||||     
T  17719441 tctctaaataattgtcactttagaataccaatgcaacatttattatctttttccattattatacctttatttattaaatttcatccaacttaactactcc 17719342  T
Q  457 actaact 463  Q
    |||||||    
T  17719341 actaact 17719335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 26626295 - 26626213
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| ||||| |||||| |||||||||| |||| ||| || ||||| ||||||||||||||||||    
T  26626295 tctcaaaataattgtcactttaaaatatcaatgcagcatttattattttttcccattattatacccttatttattgaatttca 26626213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 39301139 - 39301057
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||||||||||||||| |||| | | ||||||||  ||||||| || |||||| |||||||||||||||||    
T  39301139 tctcaaaataattgtcattttagaatatcaatgaatcgtttattattattttccattattatacttttatttattgaatttca 39301057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 45425848 - 45425767
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||| |||| ||||| |||| |||||||||||| ||||| |||||| ||||| ||||||||||||||||||    
T  45425848 tcaaaataattgtcactttacaatatcaatgtaacatttattattttttttccactattatacccttatttattgaatttca 45425767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 356 - 463
Target Start/End: Original strand, 15675367 - 15675474
Alignment:
Q  356 tatctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactact 454  Q
    ||||| ||||||| ||||| |||||||||  ||| ||| |||||||| ||||||| || ||||||| |||||||||| ||| | |||| |||||||||||    
T  15675367 tatcttaaaataactgtcactttagaataccaatacaatatttatta-atttttctacgaatatacccttatttattaaatgtaactccatttaactact 15675465  T
Q  455 ctactaact 463  Q
    |||||||||    
T  15675466 ctactaact 15675474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 362 - 439
Target Start/End: Original strand, 50753 - 50831
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||| |||||||||| |||||| |||||||||| |||||||| || |||||  ||||||||| |||||||    
T  50753 aaaataattgtcactttagaatatcaatgcagcatttattatctttttccattattatacctttatttattaaatttca 50831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 455
Target Start/End: Complemental strand, 5053335 - 5053238
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||| | |||  ||| || |||||||||||||||||||| |||  | ||||||||||||    
T  5053335 tctcaaaataattgtcactttaaaatatcaatgcaacatttatttt-tttccccattattatactcttatttattgaatctcatccaatttaactactc 5053238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 22772018 - 22771936
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||   ||| || || ||||| ||||||||||||||||||    
T  22772018 tctcaaaataattgtcactttagaataccaatgcaacatttattattacttttcattattatacccttatttattgaatttca 22771936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 360 - 439
Target Start/End: Original strand, 40028446 - 40028527
Alignment:
Q  360 tcaaaataattgtcattttagaatat--aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||||| | |||||  |||| |||||||||||| |||||||| || |||| |||| ||||||||||||||    
T  40028446 tcaaaataattgtcatttaataatattaaatgtaacatttattatttttttccagtattatattcttgtttattgaatttca 40028527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 454
Target Start/End: Original strand, 7172883 - 7172944
Alignment:
Q  393 catttattatatttttccactaatatactcttatttattgaatttcactctatttaactact 454  Q
    |||||||||| ||||||||||| ||||| |||||||||||||||||| || | |||||||||    
T  7172883 catttattatttttttccactattatacccttatttattgaatttcattcaacttaactact 7172944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 463
Target Start/End: Complemental strand, 29226708 - 29226605
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactct-atttaactactcta 457  Q
    ||||||||||||||| |||| ||||| |||||| |||||||||||||||| || || | ||| |||||||||||||||||| ||| | |||||||||| |    
T  29226708 tcaaaataattgtcactttaaaatatcaatgcagcatttattatattttt-cattattgtacccttatttattgaatttca-tctaacttaactactcca 29226611  T
Q  458 ctaact 463  Q
    ||||||    
T  29226610 ctaact 29226605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 36007072 - 36006988
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattata--tttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||| |   ||||| ||||| ||| ||||||||||||||||||||    
T  36007072 tctcaaaataattgtcactttagaatactaatgcaacaattatttttatttttttcactattatgctcttatttattgaatttca 36006988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 439
Target Start/End: Complemental strand, 1875916 - 1875840
Alignment:
Q  364 aataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||| |||| ||||  ||||||||||||||||  ||||||||||| ||||| |||||||||| |||||||    
T  1875916 aataattgtcactttacaataccaatgcaacatttattacttttttccactagtatacccttatttattaaatttca 1875840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 31231667 - 31231769
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 460  Q
    |||||||||||||||||| ||||  |||||| |||||||||| |||||||| ||  |||| ||||||||||||| || |  | | |||||||||| ||||    
T  31231667 aaaataattgtcattttataataccaatgcatcatttattatttttttccattataatacccttatttattgaactttatccaacttaactactccacta 31231766  T
Q  461 act 463  Q
    |||    
T  31231767 act 31231769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 36967307 - 36967388
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||| | |||||||||| ||||||  ||||||||| ||||| || || ||||| ||||||||||||||||||    
T  36967307 tctcaaaataattgttactttagaatatcaatgcataatttattat-ttttttcattattatacccttatttattgaatttca 36967388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 2767480 - 2767403
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaa 434  Q
    |||| |||||||||||| ||||||||| |||| ||||||||||||  |||||||| ||  |||| |||||||||||||    
T  2767480 tctcgaaataattgtcactttagaatactaatacaacatttattacttttttccaatataatacccttatttattgaa 2767403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 9300298 - 9300190
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttcc--actaatatactcttatttattgaatttcactctatttaactact 454  Q
    ||||||||||||||||| |||| ||||  ||||||  ||||||||| | |||||  |||| ||||  |||||||||||||||||| || | |||||||||    
T  9300298 tctcaaaataattgtcactttacaataccaatgcagtatttattatttctttccccactattatatccttatttattgaatttcattcaacttaactact 9300199  T
Q  455 ctactaact 463  Q
    | |||||||    
T  9300198 ccactaact 9300190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 437
Target Start/End: Complemental strand, 396790 - 396714
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaattt 437  Q
    ||||||||||||| |||||||||  |||||||||||||||||  |||| || || ||||| |||||| |||||||||    
T  396790 aaaataattgtcactttagaataccaatgcaacatttattattatttttcattattatacccttattaattgaattt 396714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 39482545 - 39482654
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatat---actcttatttattgaatttcactctatttaactac 453  Q
    ||||||||||||||||| |||| ||||  ||||||  ||||||||| |||| |||||| |||   || |||||||||||||||||| || | |||||||     
T  39482545 tctcaaaataattgtcactttacaataccaatgcagtatttattattttttcccactattattatacccttatttattgaatttcattccacttaactag 39482644  T
Q  454 tctactaact 463  Q
    || |||||||    
T  39482645 tccactaact 39482654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 436
Target Start/End: Original strand, 41091930 - 41092007
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatt 436  Q
    |||||| ||||||| || |||||||||| |||||| |||||||| |||||||| |||| ||||| |||||||||||||||    
T  41091930 tctcaacataattgccaatttagaatatcaatgcagcatttatt-tatttttc-actattatacccttatttattgaatt 41092007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 44761675 - 44761571
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||| ||||  |||||| |||  ||||  ||||||||||| ||||| || |||||||||||||||  | | ||||||||||     
T  44761675 tctcaaaataattgtcactttacaataccaatgcagcat--attagttttttccactattataccctcatttattgaatttcatccaacttaactactcc 44761578  T
Q  457 actaact 463  Q
    |||||||    
T  44761577 actaact 44761571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 463
Target Start/End: Complemental strand, 4924214 - 4924144
Alignment:
Q  394 atttattat-atttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 463  Q
    ||||||||| |||||| ||||||||||| |||||||||| | ||||| || | |||||||||||| |||||    
T  4924214 atttattattattttttcactaatatacccttatttattaagtttcattcaacttaactactctattaact 4924144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 34948868 - 34948764
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||| | |||||||||  ||||||| ||||||||| |||||| | |  ||||| ||||||||||||||||||  | | ||||||||||     
T  34948868 tctcaaaataattgttactttagaataccaatgcaatatttattatttttttc-attgttatac-cttatttattgaatttcatccaacttaactactcc 34948771  T
Q  457 actaact 463  Q
    |||||||    
T  34948770 actaact 34948764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 439
Target Start/End: Complemental strand, 14855115 - 14855035
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatattttt--ccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||| |||| ||||| ||||||| ||||||||| |||||  |||||| |||||  || ||||||||||||||    
T  14855115 aaaataattgtcactttacaatattaatgcaatatttattatttttttttccactattataccattctttattgaatttca 14855035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 439
Target Start/End: Original strand, 17654530 - 17654578
Alignment:
Q  391 aacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||  ||||||||||| |||| ||||||||||| ||||||    
T  17654530 aacatttattattcttttccactaacatacccttatttattgtatttca 17654578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 463
Target Start/End: Complemental strand, 21649478 - 21649438
Alignment:
Q  423 ttatttattgaatttcactctatttaactactctactaact 463  Q
    ||||||||||||||||| || |||||||||||| |||||||    
T  21649478 ttatttattgaatttcattcaatttaactactcaactaact 21649438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 436
Target Start/End: Original strand, 39890614 - 39890646
Alignment:
Q  404 tttttccactaatatactcttatttattgaatt 436  Q
    |||||||||||||||||| ||||||||||||||    
T  39890614 tttttccactaatatacttttatttattgaatt 39890646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 9e-25; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 37506057 - 37506163
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||  |||| |||||||||||||||||| || | ||||||||||     
T  37506057 tctcaaaataattgtcactttagaatatcaatgcaacatttattatttttttccattataatacccttatttattgaatttcattcaacttaactactcc 37506156  T
Q  457 actaact 463  Q
    |||||||    
T  37506157 actaact 37506163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 463
Target Start/End: Original strand, 39864045 - 39864150
Alignment:
Q  359 ctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactcta 457  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||  | | |||||||||| |    
T  39864045 ctcaaaataattgtcactttacaatatcaatgcaacatttattatttttttccactattatacccttatttattgaatttcatccaacttaactactcca 39864144  T
Q  458 ctaact 463  Q
    ||||||    
T  39864145 ctaact 39864150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 360 - 463
Target Start/End: Original strand, 7759150 - 7759254
Alignment:
Q  360 tcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 458  Q
    ||||||||||||||| |||| |||| ||||||| |||||||||| |||||||| || ||||| |||||||||||||||||| || | ||||||| || ||    
T  7759150 tcaaaataattgtcactttacaataataatgcatcatttattatttttttccattattatacccttatttattgaatttcattcaacttaactattccac 7759249  T
Q  459 taact 463  Q
    |||||    
T  7759250 taact 7759254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 358 - 436
Target Start/End: Original strand, 12039015 - 12039094
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatt 436  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||  |||||||||| ||||| |||||||||||||||    
T  12039015 tctcaaaataattgtcactttacaatactaatgcaacatttattattattttccactattatacccttatttattgaatt 12039094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 6785189 - 6785271
Alignment:
Q  358 tctcaaaataattgtcattttagaatata-atgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| ||||   |||||||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  6785189 tctcaaaataattgtcactttacaatacctatgcaacatttattatttttttccactattatacccttatttattgaatttca 6785271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 431
Target Start/End: Complemental strand, 17988930 - 17988856
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttatt 431  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||| ||||||| ||||||||    
T  17988930 tctcaaaataattgtcattttaaaatattaatgcaacatttattatttctttccactattatactcatatttatt 17988856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 33733447 - 33733341
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||||||||  |||| | ||||||||||  ||||||| || ||||| |||||||||||||||||| ||||  |||| |||||    
T  33733447 tctcaaaataattgtcactttagaataccaatgaagcatttattattcttttccattattatacccttatttattgaatttcattctacctaaccactct 33733348  T
Q  457 actaact 463  Q
    |||||||    
T  33733347 actaact 33733341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 439
Target Start/End: Complemental strand, 34031708 - 34031630
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||| ||||||| ||| |||||| |||||||||| |||||||| || ||||||||||||||||||||||||    
T  34031708 aaaataattgtcgttttagactatcaatgcagcatttattatgtttttccattattatactcttatttattgaatttca 34031630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 35682978 - 35682897
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||| || |||||||||| ||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  35682978 tctcaaaataattgccaatttagaatatcaatgcaatatttattat-tttttccactattatacccttatttattgaatttca 35682897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 49224171 - 49224065
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| ||||| || ||  |||| ||||||||||||| ||||  | | ||||||||||     
T  49224171 tctcaaaataattgtcactttagaatactaatgcaacatttattattttttttcattataatacccttatttattgaacttcatccaacttaactactcc 49224072  T
Q  457 actaact 463  Q
    |||||||    
T  49224071 actaact 49224065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 440
Target Start/End: Complemental strand, 23169176 - 23169095
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcac 440  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||||   |||||||||| |||||||||||||||||||||||||    
T  23169176 tctcaaaataattgtcactttacaataccaatgcaacatttattac--ttttccactattatactcttatttattgaatttcac 23169095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 24991839 - 24991756
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| |||| |||||||||||||||||| ||||| |||||| |||||  |||||||||||||||||    
T  24991839 tctcaaaataattgtcactttacaatactaatgcaacatttattatttttttcccactattatacctttatttattgaatttca 24991756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 357 - 463
Target Start/End: Original strand, 37177768 - 37177875
Alignment:
Q  357 atctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||||||||||||||||| | |||| |||| |||||||  |||| ||||| |||||||||||||||| ||||| |  | | |||||||||     
T  37177768 atctcaaaataattgtcattttagaatgtcaatgtaacacttattattatttttcactattatactcttatttatttaattttatccaacttaactacta 37177867  T
Q  456 tactaact 463  Q
    ||||||||    
T  37177868 tactaact 37177875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 26093327 - 26093409
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||| |||||||| ||||| ||| ||||| ||||||||||||||||||||| || ||||| ||||||||||||| ||||    
T  26093327 tctcaaaacaattgtcactttagtatactaatgtaacatttattatatttttccattattatacccttatttattgaacttca 26093409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 40145030 - 40144950
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| |||| ||| ||  |||| ||||||||||||| ||||    
T  40145030 tcaaaataattgtcactttagaatatcaatgcaacatttattattttttcccattataatacccttatttattgaacttca 40144950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 4659710 - 4659815
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||| ||||  |||||||||||  |||| ||||||||||| ||||  |||||||||||||||||| || | |||| |||||     
T  4659710 tctcaaaataattgtcactttacaataccaatgcaacattatttat-tttttccactattatatccttatttattgaatttcattcaacttaattactcc 4659808  T
Q  457 actaact 463  Q
    |||||||    
T  4659809 actaact 4659815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 20210025 - 20209919
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||| |||| ||| ||  |||| ||||||||||||| ||||  | | ||||||||||     
T  20210025 tctcaaaataattgtcactttagaataccaatgcagcatttattattttttcccattataatacccttatttattgaacttcatccaacttaactactcc 20209926  T
Q  457 actaact 463  Q
    |||||||    
T  20209925 actaact 20209919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 27721470 - 27721571
Alignment:
Q  362 aaaataattgtcattttagaatataa-tgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 460  Q
    |||||||||| || |||| |||| || |||| |||||||||| ||||||||||| |||||| ||||||||||||||| |  | ||||||||| |||||||    
T  27721470 aaaataattgccactttacaatacaaatgcatcatttattat-tttttccactattatacttttatttattgaattttatccaatttaactattctacta 27721568  T
Q  461 act 463  Q
    |||    
T  27721569 act 27721571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 31042730 - 31042812
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||| ||| || |||||||||| |||||||||||  |||   |||||||||||||||||    
T  31042730 tctcaaaataattgtcactttagaatatcaatacatcatttattatttttttccactatgatatctttatttattgaatttca 31042812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 437
Target Start/End: Original strand, 7351572 - 7351649
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaattt 437  Q
    ||||||||||||||||||||||||||| ||||||||| |||||   |||||| || || ||||||||||||||||||||||    
T  7351572 tctcaaaataattgtcattttagaatactaatgcaac-tttat--cattttttcattattatactcttatttattgaattt 7351649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 26252646 - 26252562
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttc--cactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||||||||| ||| | || |||||||||||| |||||||   || |||||||| ||||||||||||||||||    
T  26252646 tctcaaaataattgtcattttacaatttcaaagcaacatttattttattttttttcattaatatacccttatttattgaatttca 26252562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 52429279 - 52429383
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatattttt--ccactaatatactcttatttattgaatttcactctatttaactactctac 458  Q
    ||||||||||||| |||| ||||| ||||||||||||||||| |||||   || || ||||| |||||||| ||||||||| || | |||||||||| ||    
T  52429279 aaaataattgtcactttacaatatcaatgcaacatttattattttttttctcattattatacccttatttaatgaatttcattcaacttaactactccac 52429378  T
Q  459 taact 463  Q
    |||||    
T  52429379 taact 52429383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 429
Target Start/End: Original strand, 29074817 - 29074884
Alignment:
Q  362 aaaataattgtcattttagaatataa-tgcaacatttattatatttttccactaatatactcttattta 429  Q
    ||||||||||||| |||| |||| || | ||||||||||| ||||||||||||||||||||||||||||    
T  29074817 aaaataattgtcactttataatacaaatacaacatttatt-tatttttccactaatatactcttattta 29074884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 35367735 - 35367841
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactct-atttaactactc 455  Q
    ||||||||||||||||| |||| ||||  |||| |||||||||||   |||| ||||| ||||| |||||||||||||||||| ||| | ||||||||||    
T  35367735 tctcaaaataattgtcactttacaataccaatgaaacatttattagtctttttcactattatacccttatttattgaatttca-tctaacttaactactc 35367833  T
Q  456 tactaact 463  Q
     |||||||    
T  35367834 cactaact 35367841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 38787271 - 38787380
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatattttt---ccactaatatactcttatttattgaatttcactctatttaactac 453  Q
    ||||||||||||||||| ||||||| |  ||||||| ||||||| | |||||   ||| || ||||| ||||||||||||||||||  | ||||||||||    
T  38787271 tctcaaaataattgtcactttagaaaagcaatgcaaaatttattttttttttttcccattattatacccttatttattgaatttcatccaatttaactac 38787370  T
Q  454 tctactaact 463  Q
    || |||||||    
T  38787371 tccactaact 38787380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 431
Target Start/End: Original strand, 3312056 - 3312126
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttatt 431  Q
    ||||||||||||| |||| ||||| ||| |||||||||||||  | |||||||| ||||||||||||||||    
T  3312056 aaaataattgtcactttataatatcaatacaacatttattattatattccactattatactcttatttatt 3312126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 399
Target Start/End: Complemental strand, 6160635 - 6160593
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttat 399  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  6160635 tctcaaaataattgtcattttagaatatcaatgcaacatttat 6160593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 439
Target Start/End: Original strand, 9379169 - 9379246
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||||||| || |||||   |||||||| |||||||    
T  9379169 aaaataattgtcattttagaatatcaatgcaatatttatt-tatttttccattattatacctatatttattaaatttca 9379246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 439
Target Start/End: Complemental strand, 10588000 - 10587946
Alignment:
Q  385 taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||| |||||||||||||  |||| ||||||||||||||||||||||| ||||||    
T  10588000 taatacaacatttattattctttttcactaatatactcttatttattgcatttca 10587946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 22856389 - 22856340
Alignment:
Q  390 caacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||| ||||| ||||| |||||| |||||||||||||||||    
T  22856389 caacatttattatttttttgcactattatacttttatttattgaatttca 22856340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 2572405 - 2572508
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttatt-atatttttccactaatatactcttatttattgaatttcactctatttaactactctact 459  Q
    |||| ||||| || |||| ||||| ||||||| ||||||| || |||||||| || |||| | ||||||||||||||||| || | |||||||||| |||    
T  2572405 aaaacaattgccactttaaaatatcaatgcaatatttatttatttttttccattattatatttttatttattgaatttcattcaacttaactactccact 2572504  T
Q  460 aact 463  Q
    ||||    
T  2572505 aact 2572508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 36701856 - 36701936
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||| ||||||||||| | |||||||| |||||| || || ||||  ||||||| || ||||||||||||||||||||||||    
T  36701856 tctcataataattgtcactgtagaatatcaatgcatcacttgttat--ttttccattattatactcttatttattgaatttca 36701936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 36717960 - 36718040
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||| ||||||||||| | |||||||| |||||| || || ||||  ||||||| || ||||||||||||||||||||||||    
T  36717960 tctcataataattgtcactgtagaatatcaatgcatcacttgttat--ttttccattattatactcttatttattgaatttca 36718040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 37539066 - 37539166
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 460  Q
    ||||||||||| |||||||||||  |||| ||  ||||| || |||||||||||  |||| ||||||||||||||||||    | |||||||||||||||    
T  37539066 aaaataattgttattttagaataccaatgtaa--tttataatttttttccactatgatacccttatttattgaatttcatcaaacttaactactctacta 37539163  T
Q  461 act 463  Q
    |||    
T  37539164 act 37539166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 428
Target Start/End: Complemental strand, 43500925 - 43500854
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttattt 428  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||  ||||||| || || || |||||||    
T  43500925 tctcaaaataattgtcactttagaatactaatgcagcatttattattattttccattattacacccttattt 43500854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 463
Target Start/End: Original strand, 9307564 - 9307666
Alignment:
Q  363 aaataattgtcattttagaatat-aatgcaacatttattatatttttcc-actaatatactcttatttattgaatttcactctatttaactactctacta 460  Q
    |||||||||||||||||  |||| |||| |  ||||||||| ||||||| |||| |||||  |||||||||||||||||  | | |||||||||| ||||    
T  9307564 aaataattgtcattttacgatatcaatgtagtatttattatttttttcccactattatacctttatttattgaatttcatccaacttaactactccacta 9307663  T
Q  461 act 463  Q
    |||    
T  9307664 act 9307666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 11449824 - 11449924
Alignment:
Q  362 aaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 460  Q
    |||||| |||||| ||||||||| ||||||||||||| || | | |||||| || ||||| ||||||||||||||||||  | |||| ||||||||| ||    
T  11449824 aaaatagttgtcactttagaatactaatgcaacatttttttt-tctttccattattatac-cttatttattgaatttcatccaattttactactctatta 11449921  T
Q  461 act 463  Q
    |||    
T  11449922 act 11449924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 409
Target Start/End: Complemental strand, 6268429 - 6268376
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttatt-atatttttc 409  Q
    |||| ||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  6268429 tctccaaataattgtcattttagaatatcaatgtaacatttattaatatttttc 6268376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 402
Target Start/End: Original strand, 37238960 - 37239005
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattat 402  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||    
T  37238960 tctcaaaataattgtcattttaaaatattaatgcagcatttattat 37239005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 39395279 - 39395230
Alignment:
Q  390 caacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||  |||| |||||||||||||||| |||||| ||||||    
T  39395279 caacatttattattctttttcactaatatactcttacttattgcatttca 39395230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 426
Target Start/End: Complemental strand, 41122008 - 41121939
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttat 426  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||||| ||||| || || ||||| |||||    
T  41122008 tctcaaaataattgtcactttaaaatatcaatacaacatttattattttttttcattattatacccttat 41121939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 44426891 - 44426838
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttcc 410  Q
    ||||||||| ||||||| |||||||||| ||| ||||||||||||| |||||||    
T  44426891 tctcaaaattattgtcactttagaatataaatacaacatttattatttttttcc 44426838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 44707916 - 44707863
Alignment:
Q  386 aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||| ||||||||| | ||||||||| |||||  |||||||||||||||||    
T  44707916 aatgcaatatttattatttgtttccactattatacctttatttattgaatttca 44707863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 446
Target Start/End: Complemental strand, 45118671 - 45118642
Alignment:
Q  417 atactcttatttattgaatttcactctatt 446  Q
    ||||||||||||||||||||||||||||||    
T  45118671 atactcttatttattgaatttcactctatt 45118642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 11642135 - 11642183
Alignment:
Q  390 caacatttattatatttttccactaatatactcttatttattgaatttc 438  Q
    |||||||||||||  ||||||||||||||||  |||||||||| |||||    
T  11642135 caacatttattattcttttccactaatatacaattatttattgtatttc 11642183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 4e-24; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 354 - 457
Target Start/End: Complemental strand, 23745525 - 23745420
Alignment:
Q  354 tatatctcaaaataattgtcattttagaata-taatgcaacatttattata-tttttccactaatatactcttatttattgaatttcactctatttaact 451  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||||| |||||||||||||||  | || | ||||||    
T  23745525 tatatctcaaaataattgttattttagaatattaatgcaacatttattatatttttttcactaatatacacttatttattgaattatattccacttaact 23745426  T
Q  452 actcta 457  Q
    ||||||    
T  23745425 actcta 23745420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 32346241 - 32346137
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||| |||||||| || ||||| |||||||||||||||||| || | ||||||||||     
T  32346241 tctcaaaataattatcattttagaatactaatgcagcatttattatctttttccattattatacccttatttattgaatttcattcaacttaactactcc 32346142  T
Q  457 actaa 461  Q
    |||||    
T  32346141 actaa 32346137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 11373617 - 11373511
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||| | |||| ||||| |||||| |||||||||| |||| |||||| ||||||||||||||||||||||||  | | ||||||||||     
T  11373617 tctcaaaataattgttactttacaatatcaatgcagcatttattattttttcccactattatactcttatttattgaatttcatccaacttaactactcc 11373518  T
Q  457 actaact 463  Q
    |||||||    
T  11373517 actaact 11373511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 34947440 - 34947546
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||| |||||||| || ||||| || |||||||||||||||  | | ||||||||||     
T  34947440 tctcaaaataattgtcactttagaataccaatgcaacatttattatttttttccattattataccctcatttattgaatttcatccaacttaactactcc 34947539  T
Q  457 actaact 463  Q
    |||||||    
T  34947540 actaact 34947546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 759280 - 759198
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||| |||||||| || ||||| ||||||||||||||||||    
T  759280 tctcaaaataattgtcactttagaataccaatgcagcatttattatttttttccattattatacccttatttattgaatttca 759198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 7457607 - 7457530
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaattt 437  Q
    ||||||||||| ||| |||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  7457607 tcaaaataattatcactttacaatatcaatgcaacatttattat-tttttccactattatactcttatttattgaattt 7457530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 21760173 - 21760091
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||  || ||||| || | |||||||||||||    
T  21760173 tctcaaaataattgtcactttagaatatcaatgcaacatttattatatttttcctttattataccctcaattattgaatttca 21760091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 28202498 - 28202416
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  ||| || |||||||||| |||||||| || ||||||||||||||||||||||||    
T  28202498 tctcaaaataattgtcactttagaataccaatacagcatttattatttttttccattattatactcttatttattgaatttca 28202416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 463
Target Start/End: Original strand, 2459413 - 2459517
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 458  Q
    |||||||||||| || |||| ||||  |||||| |||||||||| ||||| ||||| ||||| ||||||||||||||||||  ||| |||||||||| ||    
T  2459413 tcaaaataattgacactttacaataccaatgcagcatttattattttttttcactattatacccttatttattgaatttcatcctacttaactactccac 2459512  T
Q  459 taact 463  Q
    |||||    
T  2459513 taact 2459517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 21350815 - 21350708
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||||||| |||| ||||  |||||| |||||||||| ||||| |||||| ||||| ||||||||||||||||||  | | ||||||||||    
T  21350815 tctcaaaataattgtcactttacaataccaatgcagcatttattattttttttccactattatacccttatttattgaatttcatccaacttaactactc 21350716  T
Q  456 tactaact 463  Q
     |||||||    
T  21350715 cactaact 21350708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 8592629 - 8592547
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||| |||||||| ||||| |||||| |||||||||| |||| | |||| |||||||||||||||| |||||||    
T  8592629 tctcaaaataattttcattttacaatatcaatgcagcatttattattttttcctactattatactcttatttattaaatttca 8592547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 24516478 - 24516372
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||| |||| |||||| | ||   |||||||||||||||||  | | ||||||||||     
T  24516478 tctcgaaataattgtcattttacaatatcaatgcaacatttattatcttttcccactattttatctttatttattgaatttcatccaacttaactactcc 24516379  T
Q  457 actaact 463  Q
    |||||||    
T  24516378 actaact 24516372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 435
Target Start/End: Complemental strand, 34100732 - 34100658
Alignment:
Q  362 aaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaat 435  Q
    ||||||||||||| |||| |||| |||||||||||||||||| ||||| ||||| ||||| ||||||||||||||    
T  34100732 aaaataattgtcactttacaatactaatgcaacatttattatgttttttcactattatacccttatttattgaat 34100658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 37245630 - 37245712
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||||| ||||  ||||| ||||| ||||||||||||||||||    
T  37245630 tctcaaaataattgtcactttacaataccaatgcaacatttattattttttctcactattatacccttatttattgaatttca 37245712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 48608807 - 48608888
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| ||||| ||||||  ||||||||| |||||||| || ||||||||||||||||||||||||    
T  48608807 tctcaaaataattgtcactttaaaatattaatgcagtatttattat-tttttccattattatactcttatttattgaatttca 48608888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 3178391 - 3178287
Alignment:
Q  362 aaaataattgtcattttagaata-taatgcaacat--ttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 458  Q
    ||||||||||| | ||||||||| |||||||||||  ||||||| |||| ||| |||||||| ||||||||||||||||||  | | |||||||||| ||    
T  3178391 aaaataattgttactttagaatactaatgcaacatatttattatgttttcccattaatatacccttatttattgaatttcatccaacttaactactccac 3178292  T
Q  459 taact 463  Q
    |||||    
T  3178291 taact 3178287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 463
Target Start/End: Complemental strand, 41506253 - 41506148
Alignment:
Q  359 ctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactcta 457  Q
    |||||||||||| ||| |||| ||||| ||||||| ||||||||  ||||| || || ||||||||||||||||||||||||  | | |||||||||| |    
T  41506253 ctcaaaataattatcactttacaatatcaatgcaatatttattaatttttttcaatattatactcttatttattgaatttcatccaacttaactactcca 41506154  T
Q  458 ctaact 463  Q
    ||||||    
T  41506153 ctaact 41506148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 83324 - 83407
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||| ||||| ||| ||  |||||||||||||||||||||||    
T  83324 tctcaaaataattgtcactttagaataccaatgcagcatttattattttttttccattatcatactcttatttattgaatttca 83407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 28103670 - 28103755
Alignment:
Q  358 tctcaaaataattgtcattttagaatataat-gcaacatttattatatttt---tccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| |||| ||| |||||||||||||| ||||   ||||||| ||||| ||||||||||||||||||    
T  28103670 tctcaaaataattgtcactttacaatacaattgcaacatttattattttttttttccactattatacgcttatttattgaatttca 28103755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 42935598 - 42935680
Alignment:
Q  358 tctcaaaataattgtcattttagaatataa-tgcaacatttattatatttttccactaat-atactcttatttattgaatttca 439  Q
    ||||||||||||||||| ||||||||| || ||||||||||||||| |||||||| | || |||||||||||||||||| ||||    
T  42935598 tctcaaaataattgtcactttagaatacaaatgcaacatttattat-tttttccaattataatactcttatttattgaacttca 42935680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 25571360 - 25571441
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||| |||||  | || ||||| ||||||||||||||||||    
T  25571360 tctcaaaataattgtcactttagaataccaatgcaacatttattat-ttttttaattattatacccttatttattgaatttca 25571441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 410
Target Start/End: Original strand, 27920926 - 27920979
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttcc 410  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  27920926 tctcaaaataattgtcactttagaatattaatgcaacatttattatttttttcc 27920979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 36790678 - 36790762
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattata--tttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  |||||| ||||||||||   |||||||| || ||||| ||||||||||||||||||    
T  36790678 tctcaaaataattgtcactttagaatagcaatgcagcatttattattattttttccattattatacccttatttattgaatttca 36790762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 37490344 - 37490421
Alignment:
Q  386 aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 463  Q
    |||||||||||||||||  ||||  |||| ||| |||||||||||||||||||| || |||||| ||||| |||||||    
T  37490344 aatgcaacatttattattattttttactagtatgctcttatttattgaatttcattcaatttaattactccactaact 37490421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 439
Target Start/End: Complemental strand, 37850916 - 37850834
Alignment:
Q  356 tatctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||||||||||||||| |||| || |||||||  |||| || ||||| |||| ||||||||||||| |||||    
T  37850916 tatctcaaaataattgtcattttagaatattaattcatcatttat--tattatttcactattatattcttatttattgattttca 37850834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 46478453 - 46478400
Alignment:
Q  387 atgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||||||||||||    
T  46478453 atgcaacatttattattttttttccactattatactcttatttattgaatttca 46478400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 21390234 - 21390341
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttcactct-atttaactact 454  Q
    ||||||||||||||||| |||| ||||  |||||||| |||||||| ||||| ||| || ||||| |||||||||||||||||| ||| | |||||||||    
T  21390234 tctcaaaataattgtcactttataataccaatgcaacgtttattattttttttccattattatacccttatttattgaatttca-tctaacttaactact 21390332  T
Q  455 ctactaact 463  Q
    | |||||||    
T  21390333 ccactaact 21390341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 444
Target Start/End: Original strand, 30107072 - 30107155
Alignment:
Q  362 aaaataattgtcattttagaata-taatgcaacattt-attatatttttccactaatatactcttatttattgaatttcactcta 444  Q
    |||||||||||||  |||| ||| ||||||||||||| ||||| |||||||||| ||||||  ||||||||||||||||||||||    
T  30107072 aaaataattgtcaccttaggatactaatgcaacattttattat-tttttccactcatataccattatttattgaatttcactcta 30107155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 437
Target Start/End: Original strand, 16904317 - 16904399
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattata--tttttccactaatatactcttatttattgaattt 437  Q
    |||||||||||||||| ||||||||||| |||| |  |||||||||   ||||||||||| ||||| ||||||||||||||||    
T  16904317 tctcaaaataattgtctttttagaatatcaatgtagtatttattattattttttccactattatacccttatttattgaattt 16904399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 31930691 - 31930606
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaat---atactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||| |||||||  | ||   | |||||||||||||||||||||    
T  31930691 tctcaaaataattgtcactttagaatatcaatgaaacatttattatttttttccctttattaaacactcttatttattgaatttca 31930606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 433
Target Start/End: Original strand, 10042223 - 10042297
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattga 433  Q
    ||||||||||  |||||||||||||| |||||| | |||||||| ||||  |||| |||||||||||||||||||    
T  10042223 tcaaaataatcttcattttagaatatcaatgcatcgtttattattttttctcactgatatactcttatttattga 10042297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 17610722 - 17610632
Alignment:
Q  363 aaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaacta 452  Q
    |||||| ||| | |||||||||| |||  ||||||||||   ||||||||||||||||  | ||||||||||||||||||||| |||||||    
T  17610722 aaataactgtgactttagaatatcaatataacatttatttattttttccactaatatatccctatttattgaatttcactctaattaacta 17610632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 19271921 - 19271816
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||| | |||| ||||  ||||||||||||||||| |||||||| || ||||| |||||||||| | |||||  | | ||||||||||     
T  19271921 tctcaaaataattgttactttacaataccaatgcaacatttattat-tttttccaatattatacccttatttattaattttcatccaacttaactactcc 19271823  T
Q  457 actaact 463  Q
    |||||||    
T  19271822 actaact 19271816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 40076258 - 40076340
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| ||||  |||||| |||||||||| |||||||| ||  | || ||||||||||||||||||    
T  40076258 tctcaaaataattgtcactttataataccaatgcagcatttattatttttttccattatcacacccttatttattgaatttca 40076340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 43873863 - 43873969
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||| |||| ||| ||  ||||  ||||||||| || ||||  | | ||||||||||     
T  43873863 tctcaaaataattgtcactttagaatatcaatgcagcatttattattttttcccattataatacatttatttattaaacttcatccaacttaactactcc 43873962  T
Q  457 actaact 463  Q
    |||||||    
T  43873963 actaact 43873969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 33932102 - 33932057
Alignment:
Q  385 taatgcaacatttattatatttttccactaatatactcttatttat 430  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||    
T  33932102 taatgaaagatttataatatttttccactaatatactcttatttat 33932057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 437
Target Start/End: Original strand, 9785928 - 9786008
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaattt 437  Q
    ||||||||||||||||| |||| ||||| |||||| ||||||||||  |||| |  || ||||| ||||||||||||||||    
T  9785928 tctcaaaataattgtcactttaaaatattaatgcagcatttattattatttttctttattatacccttatttattgaattt 9786008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 463
Target Start/End: Original strand, 37490437 - 37490509
Alignment:
Q  391 aacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 463  Q
    ||||||||||||  ||||  |||| ||| |||||||||||||||||||| || |||||| ||||| |||||||    
T  37490437 aacatttattattattttttactagtatgctcttatttattgaatttcattcaatttaattactccactaact 37490509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 452
Target Start/End: Original strand, 39519288 - 39519380
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttcc-actaatatactcttatttattgaatttcactctatttaacta 452  Q
    ||||||||| ||| |||||||||| ||| ||| |||| |||| ||||||| || ||||||   |||||||||||||||||||| |||||||||    
T  39519288 aaaataattatcactttagaatatcaatacaatatttgttatttttttcccacaaatataactttatttattgaatttcactcgatttaacta 39519380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 6495122 - 6495041
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||| |||| | |||||||| | ||||| || || ||||| |||||||||| |||||||    
T  6495122 tctcaaaataattgtcactttagaatatcaatgtagcatttatt-ttttttttcattattatacccttatttattaaatttca 6495041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 432
Target Start/End: Complemental strand, 7348307 - 7348266
Alignment:
Q  390 caacatttattatatttttccactaatatactcttatttattg 432  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  7348307 caacatttattat-tttttccactaaaatactcttatttattg 7348266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 463
Target Start/End: Original strand, 13906686 - 13906743
Alignment:
Q  405 ttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 463  Q
    ||||||||||  ||||| |||||||||  ||||||||| ||||||||||||||||||||    
T  13906686 ttttccactaccatacttttatttattccatttcactc-atttaactactctactaact 13906743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 431
Target Start/End: Original strand, 31327341 - 31327415
Alignment:
Q  358 tctcaaaataattgtcattttagaatataa-tgcaacatttattatatttttccactaatatactcttatttatt 431  Q
    ||||||| || ||||| ||||| |||| || | |||||||||||||  ||||||||||| |||||||||||||||    
T  31327341 tctcaaattatttgtccttttataatacaaatacaacatttattattcttttccactaacatactcttatttatt 31327415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 22738671 - 22738747
Alignment:
Q  386 aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 463  Q
    |||| |||||||||||| ||||||||||| |||||  ||||||||| |||||||  | | ||||||| ||||||||||    
T  22738671 aatggaacatttattat-tttttccactattatacctttatttattaaatttcatccaacttaactaatctactaact 22738747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 462
Target Start/End: Original strand, 29121472 - 29121548
Alignment:
Q  385 taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaac 462  Q
    |||| ||||||||| ||| |||||||||||| |||  ||||||||||| |||||| || || ||||||||| ||||||    
T  29121472 taatacaacatttactatttttttccactaacataaccttatttattgcatttcaatc-atctaactactccactaac 29121548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 431
Target Start/End: Complemental strand, 35016425 - 35016384
Alignment:
Q  390 caacatttattatatttttccactaatatactcttatttatt 431  Q
    ||||||||||||  |||||||||||| |||||||||||||||    
T  35016425 caacatttattacgtttttccactaacatactcttatttatt 35016384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 429
Target Start/End: Original strand, 42795931 - 42796006
Alignment:
Q  358 tctcaaaataattgtcattttagaata--taatgcaacattta--ttatatttttccactaatatactcttattta 429  Q
    ||||||||||||| |||||||| ||||   |||||||||||||  |||| ||||||||||| ||||| ||||||||    
T  42795931 tctcaaaataattttcattttacaataccaaatgcaacatttattttatttttttccactattatacacttattta 42796006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 14063276 - 14063347
Alignment:
Q  390 caacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaac 462  Q
    |||||||||||||  ||||||| ||| |||| ||||||||||| |||||| || || ||||||||| ||||||    
T  14063276 caacatttattattattttccattaacatacccttatttattgcatttcaatc-atctaactactccactaac 14063347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 14373304 - 14373375
Alignment:
Q  390 caacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaac 462  Q
    |||||||||||||  ||||||| ||| |||| ||||||||||| |||||| || || ||||||||| ||||||    
T  14373304 caacatttattattattttccattaacatacccttatttattgcatttcaatc-atctaactactccactaac 14373375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 455
Target Start/End: Complemental strand, 30546486 - 30546446
Alignment:
Q  415 atatactcttatttattgaatttcactctatttaactactc 455  Q
    |||||| ||||||||||||||||||||| | ||||||||||    
T  30546486 atatacccttatttattgaatttcactccacttaactactc 30546446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 4e-24; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 358 - 461
Target Start/End: Original strand, 44301494 - 44301599
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttatta-tatttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  | | ||||||||||    
T  44301494 tctcaaaataattgtcactttataatatcaatgcaacatttattaatatttttccactattatactcttatttattgaatttcatccaacttaactactc 44301593  T
Q  456 tactaa 461  Q
     |||||    
T  44301594 cactaa 44301599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 37311886 - 37311989
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattat-atttttccactaatatactcttatttattgaatttcactctatttaactactctact 459  Q
    ||||||||||||| |||| ||||| |||||| |||||||||| ||||||| | || |||||||||||||||||||||||| |  |||||||||||| |||    
T  37311886 aaaataattgtcactttacaatatcaatgcagcatttattattatttttctattattatactcttatttattgaatttcattaaatttaactactccact 37311985  T
Q  460 aact 463  Q
    ||||    
T  37311986 aact 37311989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 10366831 - 10366749
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||| |||| ||| || ||||| ||||||||||||||||||    
T  10366831 tctcaaaataattgtcactttagaataccaatgcaacatttattattttttcccattattatacccttatttattgaatttca 10366749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 30711007 - 30711088
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||| ||||||||||||||||||||| ||| ||||||||||||| ||||| ||||| |||| |||||||||||||||||||    
T  30711007 tctcaacataattgtcattttagaatatcaatacaacatttattat-ttttttcactattataatcttatttattgaatttca 30711088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 460
Target Start/End: Complemental strand, 51838142 - 51838038
Alignment:
Q  358 tctcaaaataattgtcattttagaat-ataatgcaacatttattatattttt-ccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||| |||||| ||||| |||||||| ||||||||| || |  |||||||||    
T  51838142 tctcaaaataattgtcactttacaattataatgcaacatttattattttttttccactattatacccttatttaatgaatttcattcaacgtaactactc 51838043  T
Q  456 tacta 460  Q
     ||||    
T  51838042 cacta 51838038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 43254046 - 43253939
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttatta-tatttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||||||| |||| ||||  |||||||||||||||| | ||||||||||| ||||| |||||||| |||||||||  | | ||||||||||    
T  43254046 tctcaaaataattgtcactttacaataccaatgcaacatttattagtttttttccactattatacccttatttaatgaatttcatcccacttaactactc 43253947  T
Q  456 tactaact 463  Q
     |||||||    
T  43253946 cactaact 43253939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 53560149 - 53560256
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttatt-atatttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||| || |||||||| ||  | || ||||||||||||| |||| || | ||||||||||    
T  53560149 tctcaaaataattgtcactttagaatactaatgcagcatttatttatttttttccattataacacccttatttattgaacttcattcaacttaactactc 53560248  T
Q  456 tactaact 463  Q
    ||||||||    
T  53560249 tactaact 53560256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 36460598 - 36460516
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| ||||  |||| ||||||| ||||||||| | ||||||||| ||||| ||||||||||||||||||    
T  36460598 tctcaaaataattgtcactttacgatatcaatgcaatatttattatttgtttccactattatacccttatttattgaatttca 36460516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 36476517 - 36476623
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||  |||||| | || ||||| ||||||||||||||||||    | |||||||||||    
T  36476517 tctcaaaataattgtcactttagaataccaatgcagcatttattacttttttctattattatacccttatttattgaatttcatcaaacttaactactct 36476616  T
Q  457 actaact 463  Q
    |||||||    
T  36476617 actaact 36476623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 463
Target Start/End: Complemental strand, 39043932 - 39043833
Alignment:
Q  363 aaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaa 461  Q
    |||||||||||| |||||||||  ||||||||||||||||| ||||  || || ||||| |||||||||||||||||| || | |||||||||| |||||    
T  39043932 aaataattgtcactttagaataccaatgcaacatttattatttttt--cattattatacccttatttattgaatttcattcaacttaactactccactaa 39043835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 425
Target Start/End: Original strand, 43715239 - 43715307
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactctta 425  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||| |||||||| || ||||||||||    
T  43715239 tctcaaaataattgtcactttagaatatcaatgtaacatttattatttttttccattattatactctta 43715307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 19822944 - 19823026
Alignment:
Q  358 tctcaaaataattgtca-ttttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| ||||||||||  |||||| |||||||||| |||||| | |||||||| ||||||||||||||||||    
T  19822944 tctcaaaataattgtcacttttagaataccaatgcagcatttattatttttttc-attaatatacccttatttattgaatttca 19823026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 33458982 - 33459086
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||| ||||||| |||  ||||||||| | ||||||| || |||||| || |||    
T  33458982 tctcaaaataattgtcattttagattatcaatacaacatttattat-tttgtccactattat-gtcttatttaataaatttcattcaatttaagtattct 33459079  T
Q  457 actaact 463  Q
    |||||||    
T  33459080 actaact 33459086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 25108662 - 25108610
Alignment:
Q  402 tatttttccactaatatactcttatttattgaatttcactctatttaactact 454  Q
    ||||||| |||||||||| | ||||||||||||||||| ||||||||||||||    
T  25108662 tattttttcactaatatatttttatttattgaatttcattctatttaactact 25108610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 34302427 - 34302340
Alignment:
Q  356 tatctcaaaataattgtcattttagaatat-aatgcaa-catttattatatttttccactaatatactcttatttattgaatttcactc 442  Q
    |||||||||||| |||| || ||||||||| ||||||| ||||||||||||||| ||||  ||||| | ||||||||||||||||||||    
T  34302427 tatctcaaaatagttgttatattagaatatcaatgcaaacatttattatatttt-ccacacatatattgttatttattgaatttcactc 34302340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 441
Target Start/End: Original strand, 9022578 - 9022660
Alignment:
Q  358 tctcaaaataattgtcattttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttcact 441  Q
    ||||| |||||||||||  ||| |||||||  |||||||||||| |||||| ||  |||||| |||||||||||||||||||||    
T  9022578 tctcataataattgtcaccttataatataacacaacatttatta-attttttcatcaatatattcttatttattgaatttcact 9022660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 460
Target Start/End: Original strand, 27471268 - 27471371
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||| ||||  ||| || |||||||||| ||| |||||||  ||||  ||||||||||||||||| || | ||||||||||     
T  27471268 tctcaaaataattgtcactttataataccaatacagcatttattatttttgtccactaccatacctttatttattgaatttcattcaacttaactactcc 27471367  T
Q  457 acta 460  Q
    ||||    
T  27471368 acta 27471371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 402
Target Start/End: Original strand, 30710576 - 30710627
Alignment:
Q  352 tatatatctcaaaataattgtcattttagaatat-aatgcaacatttattat 402  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||||||    
T  30710576 tatatgtctcaaaataattgtcactttagaatatcaatgcaacatttattat 30710627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 37497424 - 37497531
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattat-atttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||||||| |||| ||||  ||| ||||||||||||| |||||| || || |||||  |||||||||||||||||  | | ||||||||||    
T  37497424 tctcaaaataattgtcactttataataccaatacaacatttattattattttttcattattatacgtttatttattgaatttcatccaacttaactactc 37497523  T
Q  456 tactaact 463  Q
     |||||||    
T  37497524 cactaact 37497531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 3901331 - 3901249
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||| | | | |||||  |||| |||||||||||| |||||||| || ||||| ||||||||||||||||||    
T  3901331 tctcaaaataattgttactcttgaataccaatgtaacatttattatttttttccattattatacccttatttattgaatttca 3901249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 439
Target Start/End: Original strand, 11905760 - 11905837
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||| | |||||||||||| ||||||||||||||||| |||||||| || ||||   |||||||||||||||||    
T  11905760 aaaataatttttattttagaatatcaatgcaacatttattat-tttttccattattatatctttatttattgaatttca 11905837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 12904797 - 12904879
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||| | |||| |||| ||||| | | |||||| | ||||||||||| ||||| ||||||||||||||||||    
T  12904797 tctcaaaataattgttaatttataatactaatggagcttttattttttttttccactattatacccttatttattgaatttca 12904879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 30190842 - 30190736
Alignment:
Q  358 tctcaaaataattgtcattttagaat-ataatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||||||| | |||| ||||||||||||   |||||| || | ||| |||||| |||||||||||  | | ||||||||||     
T  30190842 tctcaaaataattgtcactttagaataaaaatgtaacatttattattaatttccattattttacccttattaattgaatttcatccaacttaactactcc 30190743  T
Q  457 actaact 463  Q
    |||||||    
T  30190742 actaact 30190736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 37804671 - 37804740
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatt 427  Q
    ||||||||||||||||  |||||||||| ||||||||||||||| |||||||| |||| |||| |||||||    
T  37804671 tctcaaaataattgtccctttagaatatcaatgcaacatttatt-tatttttctactattatattcttatt 37804740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 8679206 - 8679154
Alignment:
Q  386 aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||| |||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  8679206 aatgcatcatttattat-tttttccactattatacccttatttattgaatttca 8679154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 463
Target Start/End: Complemental strand, 37695837 - 37695742
Alignment:
Q  370 tgtcattttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttcactct-atttaactactctactaact 463  Q
    ||||| |||||||||  ||||||||||||||||| ||||| ||| || ||||| |||||||||||||||||| ||| | |||||||||| |||||||    
T  37695837 tgtcactttagaataccaatgcaacatttattattttttttccattattatacccttatttattgaatttca-tctaacttaactactccactaact 37695742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 38137626 - 38137546
Alignment:
Q  360 tcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||| |||  |||| |||||||| |||||||||  |||||||||| ||||   |||||||||||||||||    
T  38137626 tcaaaataattgtcactttgcaatactaatgcaatatttattattattttccactattatatctttatttattgaatttca 38137546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 27549464 - 27549361
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttcactctatttaactactctact 459  Q
    ||||||| ||||| |||| ||||| ||||||||||||||||| ||||| |||||| ||||   ||||||||||||||| | |  |||||||||| | |||    
T  27549464 aaaataactgtcactttacaatatcaatgcaacatttattatttttttcccactattataactttatttattgaatttaatttaatttaactacgccact 27549365  T
Q  460 aact 463  Q
    ||||    
T  27549364 aact 27549361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 436
Target Start/End: Complemental strand, 42469861 - 42469784
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatt 436  Q
    ||||||||||||||||| |||| ||||| |||| |||||||| | |||||||  | ||||||||||||||||||||||||    
T  42469861 tctcaaaataattgtcactttaaaatattaatgtaacatttact-tattttta-attaatatactcttatttattgaatt 42469784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 449
Target Start/End: Original strand, 45811590 - 45811648
Alignment:
Q  390 caacatttattatatttttccactaatatactcttatttattgaatttcactctatttaa 449  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||||||| || ||||||    
T  45811590 caacatttattatttttttc-actaatatattattatttattgaatttcattcaatttaa 45811648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 439
Target Start/End: Original strand, 3313187 - 3313269
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttatta-tatt-tttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||| |||| ||||| |||||| ||||||||| |||| ||| || || |||| |||||||||||||||||||    
T  3313187 tcaaaataattgtcactttacaatataaatgcagcatttattattattattttcattattataatcttatttattgaatttca 3313269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 17652686 - 17652767
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| ||||||||| |||||||  |||||| || |||||| | || ||||| |||||||||| |||||||    
T  17652686 tctcaaaataattgtcactttagaatattaatgcagtatttataat-tttttcaattattatacccttatttattaaatttca 17652767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 452
Target Start/End: Complemental strand, 37773148 - 37773051
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacattta--ttatatttttccactaatatactcttatttattgaatttcactctatttaacta 452  Q
    ||||||||||||||||| |||| ||||  |||||| ||||||  |||| |||||||| || ||||| |||||||| ||||||||| || | |||||||    
T  37773148 tctcaaaataattgtcactttacaataccaatgcagcatttattttatttttttccattattatacccttatttaatgaatttcattcaacttaacta 37773051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 463
Target Start/End: Original strand, 40462252 - 40462358
Alignment:
Q  356 tatctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactact 454  Q
    |||||||||||| |||||| |||||||| | ||||||||||||||  | |||| |||||| |||||   |||||||||||||| |  | | |||||||||    
T  40462252 tatctcaaaatagttgtcactttagaatgtcaatgcaacatttat--ttttttcccactattatacaactatttattgaattttatccaacttaactact 40462349  T
Q  455 ctactaact 463  Q
    || ||||||    
T  40462350 cttctaact 40462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 35313820 - 35313902
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| |||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  35313820 tctcaaaataattgtcactttacaataataatgcaacatttattacttttttccactattatactcttatttattgaatttca 35313902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 455
Target Start/End: Original strand, 43410363 - 43410457
Alignment:
Q  362 aaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||| ||||||||| |||||||||||||||||| |||||||| || |||||||| ||||||||||||||| || | ||||||||||    
T  43410363 aaaataattgtcactttagaatactaatgcaacatttattatttttttccattattatactctcatttattgaatttcattcaacttaactactc 43410457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 17695261 - 17695369
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattata--tttttccactaatatactcttatttattgaatttcactctatttaactact 454  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||   ||||||||||| ||||| ||||||||||||||||||  | | |||||||||    
T  17695261 tctcaaaataattgtcactttagaatatcaatgcagcatttattattattttttccactattatacccttatttattgaatttcatccaacttaactact 17695360  T
Q  455 ctactaact 463  Q
    |||||||||    
T  17695361 ctactaact 17695369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 358 - 442
Target Start/End: Original strand, 36004887 - 36004971
Alignment:
Q  358 tctcaaaataattgtcattttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttcactc 442  Q
    ||||||||||||| |||||||| ||   ||||||||||||||||||||| | |||||||||| ||||||||||| ||||||||||    
T  36004887 tctcaaaataattttcattttaaaaagcaatgcaacatttattatatttctgcactaatatattcttatttattaaatttcactc 36004971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 28186147 - 28186253
Alignment:
Q  358 tctcaaaataattgtcattttagaatataa-tgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||| ||||||| ||||  ||| ||||||||||||||||| |||  | ||||||||||||||||| || | |||||||||||    
T  28186147 tctcaaaataattgtcactttataatataaatgcagtattaattatatttttccactattatttttttatttattgaatttcattcaacttaactactct 28186246  T
Q  457 actaact 463  Q
     ||||||    
T  28186247 gctaact 28186253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 14523552 - 14523446
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactct-atttaactactc 455  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||  ||||||| || ||||  |||||| ||||||||||| ||| | ||||||||||    
T  14523552 tctcaaaataattgtcactttagaatatcaatgcaacatttattattattttccattattatatccttattaattgaatttca-tctaacttaactactc 14523454  T
Q  456 tactaact 463  Q
     |||||||    
T  14523453 cactaact 14523446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 5272314 - 5272213
Alignment:
Q  362 aaaataattgtcattttagaatataa-tgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 460  Q
    ||||||||||||| ||||||||| || ||||||||||||||| |||| ||| || ||||| ||||||||||||||||||  | |||||| ||||| ||||    
T  5272314 aaaataattgtcactttagaatacaaatgcaacatttattat-ttttcccattattatacccttatttattgaatttcatccaatttaattactccacta 5272216  T
Q  461 act 463  Q
    |||    
T  5272215 act 5272213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 5789827 - 5789746
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| ||||| |||||| |||||||||| ||||||||||| |||||  |||||||||||||||||    
T  5789827 tctcaaaataattgtcactttacaatatcaatgcatcatttattat-tttttccactattataccattatttattgaatttca 5789746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 34120617 - 34120535
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| ||||  |||||| |||||||||| |||||||| || |||||||||| |||||||||||||    
T  34120617 tctcaaaataattgtcactttaaaataccaatgcagcatttattatttttttccattattatactcttacttattgaatttca 34120535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 439
Target Start/End: Original strand, 25904722 - 25904803
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattat-atttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||| |||| ||||| |||||| |||||||||| |||||||||||| ||||| || |||||||||||||||    
T  25904722 tcaaaataattgtcactttaaaatattaatgcatcatttattattatttttccactattataccctaatttattgaatttca 25904803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 455
Target Start/End: Complemental strand, 7439033 - 7438934
Alignment:
Q  358 tctcaaaataattgtcattttagaatat--aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||||||| ||| ||||||  ||| || |||||||||| || | |||||| ||||| |||||||||||||||||| || | ||||||||||    
T  7439033 tctcaaaataattgtcacttttgaatatcaaatacatcatttattattttgtcccactattatacccttatttattgaatttcattcaacttaactactc 7438934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 3323452 - 3323346
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||| ||| |||| ||||  |||||| |||||||||| |||| |||||| || ||||||| |||||||||||||  | | ||||||||||     
T  3323452 tctcaaaataattctcactttacaataccaatgcagcatttattattttttcccactattacactcttacttattgaatttcatccaacttaactactcc 3323353  T
Q  457 actaact 463  Q
    |||||||    
T  3323352 actaact 3323346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 9458445 - 9458364
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||| |||||||| || ||||| |||||||||| |||||||    
T  9458445 tctcaaaataattgtcactttagaataccaatgcagcatttattat-tttttccattattatacccttatttattaaatttca 9458364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 36354622 - 36354517
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||||||||  ||||||  ||||||||| |||||||| || |||||  |||||||||||||||||  | | ||||||||||     
T  36354622 tctcaaaataattgtcactttagaataccaatgcagaatttattat-tttttccattattataccattatttattgaatttcatccaacttaactactcc 36354524  T
Q  457 actaact 463  Q
    |||||||    
T  36354523 actaact 36354517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 460
Target Start/End: Original strand, 16028251 - 16028351
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 458  Q
    ||||||||||   ||| ||||||||| |||||||||||||| || |||||| |||| |||||  |||||||||||||||||||| | ||||||||| |||    
T  16028251 tcaaaataatgaccatcttagaatattaatgcaacatttataatttttttc-actattatacatttatttattgaatttcactccacttaactactttac 16028349  T
Q  459 ta 460  Q
    ||    
T  16028350 ta 16028351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 16377833 - 16377758
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||||||||||||| |||||||||||     | ||||| ||||| |||||| |||||||||||||||||    
T  16377833 tcaaaataattgtcattttagaatatcaatgcaacatt-----ttttttttcactattatacttttatttattgaatttca 16377758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 7495019 - 7494936
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttatta-tatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  |||||| ||||||||| | ||||| || || ||||| ||||||||||||||||||    
T  7495019 tctcaaaataattgtcactttagaataccaatgcagcatttattatttttttttcattattatacccttatttattgaatttca 7494936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 37322362 - 37322467
Alignment:
Q  358 tctcaaaataattgtcattttagaatata-atgcaacatttattatatttttccactaatatactcttatttattgaatttcactct-atttaactactc 455  Q
    ||||||||||||||||| |||||||||   ||| | |||||||||| |||||||| || ||||| |||||||||||||||||| ||| | ||||||||||    
T  37322362 tctcaaaataattgtcactttagaatacctatgtagcatttattat-tttttccattattatacccttatttattgaatttca-tctaacttaactactc 37322459  T
Q  456 tactaact 463  Q
     |||||||    
T  37322460 cactaact 37322467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 23492804 - 23492886
Alignment:
Q  358 tctcaaaataattgtcattttagaatataa-tgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||| || ||||| ||||| |||| || | |||||||||||||  ||||||||||| |||||||||||||||| ||||||    
T  23492804 tctcaaattatttgtccttttacaatacaaatacaacatttattattcttttccactaacatactcttatttattgcatttca 23492886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 38188060 - 38187979
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcact 441  Q
    ||||| ||| |||||||||||||||  ||  |||||||||||| ||||||||||| ||||||  |||||||||||||||||||    
T  38188060 tcaaactaaatgtcattttagaataccaaatcaacatttatta-atttttccactcatataccattatttattgaatttcact 38187979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 28170730 - 28170681
Alignment:
Q  390 caacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||| ||||| ||||| ||||||||||||||| ||||||||    
T  28170730 caacatttattattttttttcactattatactcttatttatagaatttca 28170681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 463
Target Start/End: Original strand, 39691457 - 39691529
Alignment:
Q  391 aacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 463  Q
    ||||||||||||  ||||||| || ||||| |||||||||||||||||| || | || ||||||| |||||||    
T  39691457 aacatttattattattttccattattatacccttatttattgaatttcattcaactttactactccactaact 39691529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 463
Target Start/End: Original strand, 43730603 - 43730654
Alignment:
Q  411 actaatatactcttatttattgaatttcactctatttaactactctactaact 463  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||| |||||    
T  43730603 actaatatacttttatttattgaatttcac-ctacttaactactctagtaact 43730654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 410
Target Start/End: Original strand, 11366719 - 11366770
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatatttttcc 410  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||    
T  11366719 tcaaaatatttgtcattttacaatatcaatgcaacatttattatttttttcc 11366770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 25637413 - 25637496
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttatta-tatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  |||||| ||||||||| | |||||||| || || || |||||||||| |||||||    
T  25637413 tctcaaaataattgtcactttagaataccaatgcagcatttattattttttttccattattacacccttatttattaaatttca 25637496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 424
Target Start/End: Complemental strand, 34120701 - 34120634
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactctt 424  Q
    ||||||||||||||||| |||| ||||  |||||| |||||||||| |||||||| || |||||||||    
T  34120701 tctcaaaataattgtcactttaaaataccaatgcagcatttattatttttttccattattatactctt 34120634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 34451514 - 34451471
Alignment:
Q  356 tatctcaaaataattgtcattttagaatat-aatgcaacattta 398  Q
    ||||||||||||||||||| |||||||||| |||||||||||||    
T  34451514 tatctcaaaataattgtcactttagaatatcaatgcaacattta 34451471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 431
Target Start/End: Original strand, 43730352 - 43730407
Alignment:
Q  376 tttagaatataatgcaacatttattatatttttccactaatatactcttatttatt 431  Q
    ||||| |||||||| |||||||||||| ||||| |||||||||||| ||| |||||    
T  43730352 tttagcatataatgaaacatttattatgttttttcactaatatacttttacttatt 43730407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 439
Target Start/End: Original strand, 45235510 - 45235596
Alignment:
Q  356 tatctcaaaataattgtcattttagaata-taatgcaacatttattat--atttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||||| |||| ||||  |||||||||||||||||   ||||| || || ||||  ||||||||||||||||||    
T  45235510 tatctcaaaataattgtcactttataataccaatgcaacatttattattatttttttcattactatatccttatttattgaatttca 45235596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 463
Target Start/End: Complemental strand, 8947232 - 8947126
Alignment:
Q  360 tcaaaataattgtcattttagaatat----aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    |||||||||||||||||||| || |     ||||||| ||||||||| |||||| | || ||||| ||||||||||||||||||  | | ||||||||||    
T  8947232 tcaaaataattgtcattttacaacaataccaatgcaatatttattatttttttc-attattatacccttatttattgaatttcatccaacttaactactc 8947134  T
Q  456 tactaact 463  Q
     |||||||    
T  8947133 cactaact 8947126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 36794217 - 36794323
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||| ||| |||| ||||  |||||| |||||||||| ||||| || ||  |||| ||||||||||||| ||||  | | ||||||||||     
T  36794217 tctcaaaataattatcactttaaaataccaatgcagcatttattattttttttcattataatacccttatttattgaacttcatccaacttaactactcc 36794316  T
Q  457 actaact 463  Q
    |||||||    
T  36794317 actaact 36794323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 39785518 - 39785600
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  |||||| |||||| ||| |||| ||| ||  |||| ||||||||||||| ||||    
T  39785518 tctcaaaataattgtcactttagaataccaatgcagcatttactattttttcccattataatacccttatttattgaacttca 39785600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 434
Target Start/End: Original strand, 19444083 - 19444156
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaa 434  Q
    ||||||||||||| || | ||||| ||||||||||||||||| ||||| || || ||||| ||| |||||||||    
T  19444083 aaaataattgtcacttcaaaatatcaatgcaacatttattatttttttacattattatacccttgtttattgaa 19444156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 463
Target Start/End: Complemental strand, 26863539 - 26863432
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatat---ttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||||| |||| |||||  ||| || |||||||||||   |||||||||| |||||  ||||||| |||||||||  | | ||||||||||    
T  26863539 tcaaaataattgtcactttacaatatctatgtaaaatttattatatttcttttccactattatacatttatttaatgaatttcatccgacttaactactc 26863440  T
Q  456 tactaact 463  Q
     |||||||    
T  26863439 cactaact 26863432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 35242448 - 35242371
Alignment:
Q  386 aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 463  Q
    ||||||| |||||||||   ||| ||||| |||||| |||||||||||||||||  | | |||||||||| |||||||    
T  35242448 aatgcaatatttattattagttttcactattatacttttatttattgaatttcatccaacttaactactcaactaact 35242371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 431
Target Start/End: Complemental strand, 13435727 - 13435683
Alignment:
Q  387 atgcaacatttattatatttttccactaatatactcttatttatt 431  Q
    |||||||||||||||| |||| ||| ||||||||| |||||||||    
T  13435727 atgcaacatttattattttttaccattaatatactattatttatt 13435683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 359 - 463
Target Start/End: Original strand, 181491 - 181595
Alignment:
Q  359 ctcaaaataattgtcattttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 458  Q
    |||||||||||||||| |||| |||| |||||||||||||||||  |||| ||||| ||||| ||||||||||||||||||  | | |||||||||| ||    
T  181491 ctcaaaataattgtcactttacaatacaatgcaacatttattattatttttcactattatacccttatttattgaatttcatccaacttaactactccac 181590  T
Q  459 taact 463  Q
    |||||    
T  181591 taact 181595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 442
Target Start/End: Complemental strand, 12307775 - 12307691
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactc 442  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  12307775 tctcaaaataattgtcactttaaaatattaatacaacatttattat-tttttcaactaatatattcttatttattgaatttcactc 12307691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 11656128 - 11656045
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||| ||||| ||| || ||||| ||||||||||||||||||    
T  11656128 tctcaaaataattgtcactttagaatatcaatgcagcatttattatttttttcccattattatacccttatttattgaatttca 11656045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 435
Target Start/End: Original strand, 34299931 - 34300006
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatt-tttccactaatatactcttatttattgaat 435  Q
    ||||||||||||| |||||||||| ||| ||||||||||||| || ||||||||||||||  ||||||||||||||    
T  34299931 aaaataattgtcactttagaatatcaatacaacatttattattttctttccactaatatatccttatttattgaat 34300006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 5302284 - 5302366
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||| |||||||| ||  |||| | ||||||||||| ||||    
T  5302284 tctcaaaataattgtcactttagaatactaatgcagcatttattatttttttccattataatacccgtatttattgaacttca 5302366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 7920174 - 7920254
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||| ||||||| ||||| |||||  |||||||||||||||||    
T  7920174 tctcaaaataattatcactttagaatatcaatgcaacatttatt-tattttt-cactattataccattatttattgaatttca 7920254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 8695007 - 8695084
Alignment:
Q  386 aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 463  Q
    |||||||||||||||||  |||||||||| |||| |||||||||| ||||||||||  ||||||| |||  |||||||    
T  8695007 aatgcaacatttattattattttccactagtatattcttatttatagaatttcacttcatttaaccacttcactaact 8695084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 29363237 - 29363321
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattata--tttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| || ||||||  |||||| ||||||||||   |||||||| || ||||||||||||||||||||||||    
T  29363237 tctcaaaataattgtcacttcagaataccaatgcagcatttattattattttttccattattatactcttatttattgaatttca 29363321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 437
Target Start/End: Original strand, 30716832 - 30716913
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttatta-tatttttccactaatatactcttatttattgaattt 437  Q
    ||||||||||||||||| |||||||||  | |||||||||||||| | |||||||| ||  |||||||||||||||||||||    
T  30716832 tctcaaaataattgtcactttagaataccagtgcaacatttattattttttttccattataatactcttatttattgaattt 30716913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 438
Target Start/End: Complemental strand, 23397796 - 23397716
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatatttttc-cactaatatactcttatttattgaatttc 438  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| |||| |  | |||| |||| ||||||||||||||||    
T  23397796 tcaaaataattgtcactttagaatatcaatgcaacatttattatgttttccttagtaatttacttttatttattgaatttc 23397716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 6801863 - 6801970
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttatta-tatttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||| | |||||||| ||  |||| ||||||||| ||| ||||  | | ||||||||||    
T  6801863 tctcaaaataattgtcactttataatatcaatgcaacatttattattttttttccattataatacccttatttatcgaacttcatccaacttaactactc 6801962  T
Q  456 tactaact 463  Q
     |||||||    
T  6801963 cactaact 6801970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 463
Target Start/End: Complemental strand, 24983579 - 24983524
Alignment:
Q  408 tccactaatatactcttatttattgaatttcactctatttaactactctactaact 463  Q
    ||||||||||||| ||||||||||||||||||| | | |||||||||| |||||||    
T  24983579 tccactaatatacccttatttattgaatttcacccaacttaactactccactaact 24983524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 359 - 440
Target Start/End: Complemental strand, 27367607 - 27367523
Alignment:
Q  359 ctcaaaataattgtcattttagaatat-aatgcaacatttatta--tatttttccactaatatactcttatttattgaatttcac 440  Q
    |||| ||||||||||| |||| ||||  |||| |||||||||||  | ||||||||||| ||||| |||||||||||||||||||    
T  27367607 ctcagaataattgtcactttacaataccaatgtaacatttattagttttttttccactattatacccttatttattgaatttcac 27367523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 359 - 440
Target Start/End: Complemental strand, 27457954 - 27457870
Alignment:
Q  359 ctcaaaataattgtcattttagaatat-aatgcaacatttatta--tatttttccactaatatactcttatttattgaatttcac 440  Q
    |||| ||||||||||| |||| ||||  |||| |||||||||||  | ||||||||||| ||||| |||||||||||||||||||    
T  27457954 ctcagaataattgtcactttacaataccaatgtaacatttattagttttttttccactattatacccttatttattgaatttcac 27457870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 439
Target Start/End: Original strand, 15582222 - 15582298
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||||||||||| ||||||| | ||||  ||||||| |||||  |||  ||||||||||||||||||    
T  15582222 aaaataattgtcattttagaatatcaatgcaataattat--tattttttcactatcatatccttatttattgaatttca 15582298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 461
Target Start/End: Original strand, 21010104 - 21010210
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatattttt--ccactaatatactcttatttattgaatttcactctatttaactact 454  Q
    ||||||||||||||||| |||| ||||  |||||| ||||||| || |||||  ||| || |||||| |||||||||||||||||  | | |||||||||    
T  21010104 tctcaaaataattgtcactttataataccaatgcagcatttataatttttttttccattattatactgttatttattgaatttcatccaacttaactact 21010203  T
Q  455 ctactaa 461  Q
    | |||||    
T  21010204 ccactaa 21010210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 21425738 - 21425656
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattata--tttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||| | |||| ||||| |||||||||||||||||   ||||||||| | ||||  ||||||||||||||||||    
T  21425738 tcaaaataattgttactttacaatatcaatgcaacatttattattattttttccaccattatatccttatttattgaatttca 21425656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 31894388 - 31894309
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||| |||||||| | ||||| ||||||||||||||  ||||||| ||||| ||||| |||||||||| |||||||    
T  31894388 tctcaaaataaatgtcattt-acaatatcaatgcaacatttat--tattttttcactattatacccttatttattaaatttca 31894309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 34657746 - 34657637
Alignment:
Q  358 tctcaaaataattgtcattttagaatata-atgcaacatttattatattttt---ccactaatatactcttatttattgaatttcactctatttaactac 453  Q
    ||||||||||||||||| |||| ||||   |||||  |||||||||||||||   |||||| |||||  |||||||||||||||||  | | ||||||||    
T  34657746 tctcaaaataattgtcactttacaatacctatgcagaatttattatattttttttccactattatacatttatttattgaatttcatccaacttaactac 34657647  T
Q  454 tctactaact 463  Q
    || |||||||    
T  34657646 tccactaact 34657637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 1517247 - 1517298
Alignment:
Q  386 aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| ||||  |||||||||| | |||||||||||||||||    
T  1517247 aatgcaacatttattatttttt--cactaatatatttttatttattgaatttca 1517298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 1519334 - 1519385
Alignment:
Q  386 aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| ||||  |||||||||| | |||||||||||||||||    
T  1519334 aatgcaacatttattatttttt--cactaatatatttttatttattgaatttca 1519385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 6834545 - 6834444
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 460  Q
    ||||||||||| |  ||||||||| |||||| || ||||||| |||||||| || |||| | ||||||||||||| ||| || ||||| ||| |||||||    
T  6834545 aaaataattgttacgttagaatatcaatgcagcacttattatttttttccattattatatt-ttatttattgaatctcattcaatttatctattctacta 6834447  T
Q  461 act 463  Q
    |||    
T  6834446 act 6834444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 439
Target Start/End: Original strand, 13909361 - 13909439
Alignment:
Q  363 aaataattgtcattttagaatat-aatgcaacatttattatatttttc-cactaatatactcttatttattgaatttca 439  Q
    |||||||||| ||||||  |||| ||| ||||||||||||| |||||| || || |||||||||||||||| |||||||    
T  13909361 aaataattgtaattttacgatatcaatacaacatttattatttttttctcattattatactcttatttattcaatttca 13909439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 439
Target Start/End: Original strand, 15058055 - 15058132
Alignment:
Q  362 aaaataattgtcattttagaatata-atgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||| |||| ||||   |||||||||||||||| |||||  |||| ||||| ||||||||||||||||||    
T  15058055 aaaataattgtcactttataataccgatgcaacatttattat-tttttgtactattatacccttatttattgaatttca 15058132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 23142601 - 23142682
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||  | |||| ||| || ||||| ||| ||||||||||||||    
T  23142601 tctcaaaataattgtcactttacaatatcaatgcaacatttatcgttttttcccattattatac-cttctttattgaatttca 23142682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 454
Target Start/End: Complemental strand, 25418096 - 25418049
Alignment:
Q  406 tttccactaatatactcttatttattgaatttcactctatttaactact 454  Q
    |||||||||||||||| || || |||||||||||||| |||||||||||    
T  25418096 tttccactaatatacttttctt-attgaatttcactcgatttaactact 25418049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 32440828 - 32440722
Alignment:
Q  358 tctcaaaataattgtcattttagaatat---aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactact 454  Q
    ||||||||||||||||| ||||||| ||   |||||| ||||||||||  ||||||| || | |||  |||||||||  ||||||  | | |||||||||    
T  32440828 tctcaaaataattgtcactttagaaaatatcaatgcagcatttattattattttccattattgtacctttatttattacatttcatccaacttaactact 32440729  T
Q  455 ctactaa 461  Q
    |||||||    
T  32440728 ctactaa 32440722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 6e-20; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 41496013 - 41496119
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||  |||||||||| |||||  |||||||||| ||||||  | ||||||||||||     
T  41496013 tctcaaaataattgtcactttacaatactaatgcaacatttattattcttttccactattatacctttatttattgcatttcatccaatttaactactcc 41496112  T
Q  457 actaact 463  Q
    |||||||    
T  41496113 actaact 41496119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 6315957 - 6315875
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||  ||||||| || ||||| ||||||||||||||||||    
T  6315957 tctcaaaataattgtcactttagaataccaatgcaacatttattattattttccattattatacccttatttattgaatttca 6315875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 463
Target Start/End: Complemental strand, 6753836 - 6753732
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 458  Q
    ||||||||||| ||| |||||||||  ||||||||||||||||| |||||||| || ||||| |||||||||| |||||||  | | |||||||||| ||    
T  6753836 tcaaaataattatcactttagaataccaatgcaacatttattatctttttccattattatacccttatttattaaatttcatccaacttaactactccac 6753737  T
Q  459 taact 463  Q
    |||||    
T  6753736 taact 6753732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 463
Target Start/End: Original strand, 9515668 - 9515775
Alignment:
Q  360 tcaaaataattgtcattttagaata-taatgcaacatttattat-att--tttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||||| |||| |||| ||||||| |||||||||| |||  ||||||||| |||||||||||||| ||||||||| || | ||||||||||    
T  9515668 tcaaaataattgtcactttacaatactaatgcatcatttattattattattttccactattatactcttatttaatgaatttcattcaacttaactactc 9515767  T
Q  456 tactaact 463  Q
     |||||||    
T  9515768 cactaact 9515775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 361 - 439
Target Start/End: Original strand, 19929882 - 19929961
Alignment:
Q  361 caaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||| |||||||||  |||||||||||||||||  ||||||| || ||||| ||||||||||||||||||    
T  19929882 caaaataattgtcactttagaataccaatgcaacatttattattattttccattattatacccttatttattgaatttca 19929961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 1248784 - 1248678
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||  |||| || || ||||| |||||| ||||||||| | || | |||||||||      
T  1248784 tctcaaaataattgtcactttagaatatcaatgcaacatttattattatttttcattattatacccttattaattgaattttattcaacttaactacttc 1248685  T
Q  457 actaact 463  Q
    |||||||    
T  1248684 actaact 1248678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 6753962 - 6754068
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||| ||||  |||||||||||| || | ||||||||  ||||||| ||||||||||||||||||  | | ||||||||||     
T  6753962 tctcaaaataattgtcactttataataccaatgcaacattttttttttttttccatcaatatacccttatttattgaatttcatccaacttaactactcc 6754061  T
Q  457 actaact 463  Q
    |||||||    
T  6754062 actaact 6754068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 8725189 - 8725083
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    |||||||||||||||||||||||||||  |||||| || || ||||  |||| || || |||||| ||||||||||||||||| || | ||||||||||     
T  8725189 tctcaaaataattgtcattttagaataacaatgcagcagtttttattatttttcattattatactattatttattgaatttcattcaagttaactactcc 8725090  T
Q  457 actaact 463  Q
    |||||||    
T  8725089 actaact 8725083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 27542728 - 27542834
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||| | ||||||||| ||||||| ||| |||||  |||||||| || |||||||||||||||||||||| |  | | ||||||||||     
T  27542728 tctcaaaataattgtgactttagaatactaatgcagcatgtattacttttttccattattatactcttatttattgaattttatccaacttaactactcc 27542827  T
Q  457 actaact 463  Q
    |||||||    
T  27542828 actaact 27542834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 40899851 - 40899957
Alignment:
Q  358 tctcaaaataattgtcattttagaatataat-gcaacatttattatatttttccactaatatactcttatttattgaatttcactct-atttaactactc 455  Q
    ||||||||||||||||| |||||||||  || ||| ||||||||||  ||||||| || ||||| |||||||||||||||||| ||| | ||||||||||    
T  40899851 tctcaaaataattgtcactttagaataacattgcagcatttattattattttccattattatacccttatttattgaatttca-tctaacttaactactc 40899949  T
Q  456 tactaact 463  Q
     |||||||    
T  40899950 cactaact 40899957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 3348310 - 3348228
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||||||||||||||  |||||| |||||||||| |||||||| ||  |||  ||||||||||||| ||||    
T  3348310 tctcaaaataattgtcattttagaataccaatgcagcatttattatttttttccattataatatccttatttattgaacttca 3348228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 42803800 - 42803718
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||||||||| | || ||||||| |||||||||| || ||  | || ||||||||||||||||||||||||    
T  42803800 tctcaaaataattgtcattttacagtactaatgcatcatttattattttcttttaatattatactcttatttattgaatttca 42803718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 2588243 - 2588166
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaa 434  Q
    ||||||||||||||||| |||||||||| |||||| |||||||| ||||||| || ||  |||| |||||||||||||    
T  2588243 tctcaaaataattgtcactttagaatatcaatgcagcatttattttattttttcattataatacccttatttattgaa 2588166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 463
Target Start/End: Original strand, 4440987 - 4441060
Alignment:
Q  390 caacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 463  Q
    ||||||||||||| |||||| |||| |||||  |||||||||||||||||  | |||||||||||| |||||||    
T  4440987 caacatttattatttttttctactattataccgttatttattgaatttcatccaatttaactactccactaact 4441060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 436
Target Start/End: Complemental strand, 6616060 - 6615980
Alignment:
Q  358 tctcaaaataattgtcattttagaatata-atgcaacatttattatattttt-ccactaatatactcttatttattgaatt 436  Q
    ||||||||||||||||| |||| ||||   |||||||||||||||| ||||| |||||| ||||| |||||||||||||||    
T  6616060 tctcaaaataattgtcactttacaatacctatgcaacatttattattttttttccactattatacccttatttattgaatt 6615980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 11796344 - 11796265
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| |||| ||||| | ||||||||   ||||||||||| |||||||||||||||| |||||||    
T  11796344 tctcaaaataattgtcactttaaaataataatgtagcatttatt---tttttccactagtatactcttatttattaaatttca 11796265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 450
Target Start/End: Complemental strand, 26663023 - 26662983
Alignment:
Q  410 cactaatatactcttatttattgaatttcactctatttaac 450  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  26663023 cactaatatacttttatttattgaatttcactctatttaac 26662983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 450
Target Start/End: Complemental strand, 26934618 - 26934578
Alignment:
Q  410 cactaatatactcttatttattgaatttcactctatttaac 450  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  26934618 cactaatatacttttatttattgaatttcactctatttaac 26934578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 4818483 - 4818566
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttcc-actaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| ||||  |||| | |||||||||| ||||||| |||| ||||| ||||||||||||||||||    
T  4818483 tctcaaaataattgtcactttataataccaatgtagcatttattatttttttcccactattatacccttatttattgaatttca 4818566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 8698241 - 8698324
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttt-tccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| ||||| |||| |  ||||||||| |||| ||||||| ||||| ||||||||||||||||||    
T  8698241 tctcaaaataattgtcactttacaatatcaatgtagtatttattattttttttccactattatacccttatttattgaatttca 8698324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 356 - 426
Target Start/End: Complemental strand, 40616554 - 40616483
Alignment:
Q  356 tatctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttat 426  Q
    |||||||||| | |||||| |||||||||| |||  |||||||||||||||||||||| |||||||| ||||    
T  40616554 tatctcaaaaaagttgtcactttagaatattaataaaacatttattatatttttccaccaatatacttttat 40616483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 363 - 463
Target Start/End: Original strand, 21060569 - 21060669
Alignment:
Q  363 aaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaa 461  Q
    |||||||||||| |||||||||| |||||| |||||||| || ||||||| || |||||  ||||||||||||||| |  | | |||||||||| |||||    
T  21060569 aaataattgtcactttagaatatcaatgcatcatttatttta-ttttccattattataccattatttattgaattttatccaacttaactactccactaa 21060667  T
Q  462 ct 463  Q
    ||    
T  21060668 ct 21060669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 437
Target Start/End: Original strand, 7330441 - 7330521
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaattt 437  Q
    ||||||||||||| |||||||| ||||| ||||||||||| ||||| |||||| | ||||||||  |||| |||| |||||    
T  7330441 tctcaaaataattatcattttaaaatatcaatgcaacattaattatttttttctagtaatatacctttatgtattaaattt 7330521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 461
Target Start/End: Complemental strand, 2232254 - 2232145
Alignment:
Q  356 tatctcaaaataattgtcattttagaata-taatgcaacat---ttattatatttttccactaatatactcttatttattgaatttcactctatttaact 451  Q
    |||||| ||||||||||||||||| ||||  |||| | |||   ||||||| |||||| |||| ||||| ||||||||||||||||||  | | ||||||    
T  2232254 tatctctaaataattgtcattttacaataccaatgtagcatttattattatttttttctactattatacccttatttattgaatttcatccaacttaact 2232155  T
Q  452 actctactaa 461  Q
    |||| |||||    
T  2232154 actccactaa 2232145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 442
Target Start/End: Complemental strand, 24455130 - 24455056
Alignment:
Q  366 taattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactc 442  Q
    |||||||||  ||||||||| ||| |||||||||||||   |||| ||||||||| ||||||||||| ||||||||||    
T  24455130 taattgtcacattagaatatcaatacaacatttattat---tttcgactaatatagtcttatttattaaatttcactc 24455056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 463
Target Start/End: Original strand, 29374322 - 29374381
Alignment:
Q  404 tttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 463  Q
    ||||| ||||| ||||| |||||||||||||||| | || |||||||||||| |||||||    
T  29374322 ttttttcactattatacccttatttattgaattttattcaatttaactactccactaact 29374381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 40530403 - 40530322
Alignment:
Q  360 tcaaaataattgtcattttagaata-taatgcaacatttattatat-ttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||| |||| ||||  |||||| |||||||||| | ||| |||||| ||||| |||||||||| |||||||    
T  40530403 tcaaaataattgtcactttacaataccaatgcagcatttattatttatttcccactattatacccttatttatttaatttca 40530322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 41062339 - 41062263
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaa 434  Q
    ||||||||||||| | | |||||||||  ||||||||||||||||| |||||||| ||  |||| |||||||||||||    
T  41062339 tctcaaaataattataactttagaataccaatgcaacatttattat-tttttccattataatacccttatttattgaa 41062263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 6e-20; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 362 - 439
Target Start/End: Complemental strand, 28911340 - 28911262
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||  |||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  28911340 aaaataattgtcgatttagaatatcaatgcaacatttattatttttttccattattatactcttatttattgaatttca 28911262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 358 - 455
Target Start/End: Complemental strand, 42617091 - 42616993
Alignment:
Q  358 tctcaaaataattgtcattttagaatataa-tgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||  ||||||| || ||||| |||||||||||||||||| || | ||||||||||    
T  42617091 tctcaaaataattgtcactttagaatacaaatgcaacatttattattattttccattattatacacttatttattgaatttcattcgacttaactactc 42616993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 51624719 - 51624825
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||| ||||| |||| |||||||||||| |||||||||||  |||| ||||||||||||||||||  | | ||||||||||     
T  51624719 tctcaaaataattgtcactttacaatatcaatgtaacatttattatttttttccactatcatacccttatttattgaatttcatccaacttaactactcc 51624818  T
Q  457 actaact 463  Q
    |||||||    
T  51624819 actaact 51624825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 49428529 - 49428448
Alignment:
Q  358 tctcaaaataattgtcattttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||   ||||||||||||||||  |||||||| || ||||| ||||||||||||||||||    
T  49428529 tctcaaaataattgtcactttagaaatcaatgcaacatttattacttttttccattattatacccttatttattgaatttca 49428448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 360 - 463
Target Start/End: Original strand, 49746895 - 49747000
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattat-atttttccactaatatactcttatttattgaatttcactctatttaactactcta 457  Q
    ||||||||||||||| |||| ||||  ||||||||||||||||| ||||||||| || ||||| ||||||||||||||||||  | | |||||||||| |    
T  49746895 tcaaaataattgtcactttacaataccaatgcaacatttattattatttttccattattatacccttatttattgaatttcatccaacttaactactcaa 49746994  T
Q  458 ctaact 463  Q
    ||||||    
T  49746995 ctaact 49747000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 16821516 - 16821413
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattat-atttttccactaatatactcttatttattgaatttcactctatttaactactctact 459  Q
    ||||||||||||| |||||||||  |||||| |||||||||| |||||| ||||| ||||| |||||||||||||||||| || | |||| ||||| |||    
T  16821516 aaaataattgtcactttagaataccaatgcagcatttattattatttttgcactattatacccttatttattgaatttcattcaacttaaatactccact 16821417  T
Q  460 aact 463  Q
    ||||    
T  16821416 aact 16821413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 35380522 - 35380439
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||||| ||||| ||| || ||||||||||||||||||||||||    
T  35380522 tctcaaaataattgtcactttataataccaatgcaacatttattattttttttccattattatactcttatttattgaatttca 35380439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 455
Target Start/End: Original strand, 2653357 - 2653451
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    |||||| |||||| |||||||||| ||||||||||||||||| |||||||| || |||||  ||||||||| |||||||  | ||||||||||||    
T  2653357 aaaatagttgtcactttagaatatcaatgcaacatttattatctttttccattattatacctttatttattaaatttcatccaatttaactactc 2653451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 47773207 - 47773101
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||| |||||||| ||  |||| ||||||||||||| ||||  | | ||||||||||     
T  47773207 tctcaaaataattgtcactttagaataccaatgcagcatttattatttttttccattataatacccttatttattgaacttcatccaacttaactactcc 47773108  T
Q  457 actaact 463  Q
    |||||||    
T  47773107 actaact 47773101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 412 - 461
Target Start/End: Original strand, 30260992 - 30261041
Alignment:
Q  412 ctaatatactcttatttattgaatttcactctatttaactactctactaa 461  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  30260992 ctaatatagtcttatttattgaatttcactctacttaactactctactaa 30261041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 437
Target Start/End: Complemental strand, 49176123 - 49176042
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatattttt-ccactaatatactcttatttattgaattt 437  Q
    ||||||||||||||||| |||||||||  ||||||||| ||||||| ||||| |||||| ||||| ||||||||||||||||    
T  49176123 tctcaaaataattgtcactttagaataccaatgcaacaattattatttttttcccactattatacccttatttattgaattt 49176042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 385 - 453
Target Start/End: Original strand, 46385448 - 46385516
Alignment:
Q  385 taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactac 453  Q
    |||||||||||||||| ||||||| || |||||||| |||||||||||||||| |||| | ||||||||    
T  46385448 taatgcaacatttattttattttttcattaatatacccttatttattgaattttactcaacttaactac 46385516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 449
Target Start/End: Complemental strand, 17512530 - 17512435
Alignment:
Q  356 tatctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttat-ttattgaatttcactctatttaa 449  Q
    ||||| |||||||||||||||||| ||||| |||| || ||||||||| ||||||||||||||| | ||||| ||||||||||  |||||| ||||    
T  17512530 tatcttaaaataattgtcattttaaaatatgaatgtaatatttattatttttttccactaatatgcacttatattattgaattcaactctacttaa 17512435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 22129975 - 22130058
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttatta-tatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||||||||| ||||  |||||||||||||||| | |||||||| || |||||  |||||||||||||||||    
T  22129975 tctcaaaataattgtcattttacaataccaatgcaacatttattattttttttccattattatacctttatttattgaatttca 22130058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 38405291 - 38405208
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttatta-tatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  |||||||||||||||| | |||||||| || |||||  |||||||||||||||||    
T  38405291 tctcaaaataattgtcactttagaatagcaatgcaacatttattactttttttccattattatacctttatttattgaatttca 38405208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 5841616 - 5841534
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||   |||||| || |||||  |||||||||||||||||    
T  5841616 tctcaaaataattgtcactttagaatatcaatgcatcatttattattaatttccattattatacctttatttattgaatttca 5841534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 7061852 - 7061770
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||| | |||| ||||| ||| ||||||||||||| | ||| ||||| ||||| ||||||||||||||||||    
T  7061852 tctcaaaataattgttactttaaaatatcaatacaacatttattatttattttcactattatacccttatttattgaatttca 7061770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 356 - 437
Target Start/End: Original strand, 9301463 - 9301545
Alignment:
Q  356 tatctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaattt 437  Q
    ||||| |||||||||||||||||||||||| |||| |   ||||||||  |||| |||||||||| |||||||||||||||||    
T  9301463 tatctaaaaataattgtcattttagaatatcaatgtattgtttattattatttttcactaatataatcttatttattgaattt 9301545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 463
Target Start/End: Complemental strand, 30682380 - 30682278
Alignment:
Q  363 aaataattgtcattttagaatat-aatgcaacatttattat-atttttccactaatatactcttatttattgaatttcactctatttaactactctacta 460  Q
    |||||||||||| ||||||| || |||| | |||||||||| |||||| || || ||| || ||||||||||||||||| || | |||||||||||||||    
T  30682380 aaataattgtcactttagaaaatcaatgtagcatttattattattttttcattattatgcttttatttattgaatttcattcaaattaactactctacta 30682281  T
Q  461 act 463  Q
    |||    
T  30682280 act 30682278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 36985719 - 36985801
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||| |||| | |||||| | | ||||||||| | ||||| ||||||||||||||||||    
T  36985719 tctcaaaataattgtcagtttagaatatcaatgaagcatttactgtttttttccaccattatacccttatttattgaatttca 36985801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 439
Target Start/End: Original strand, 6609694 - 6609776
Alignment:
Q  362 aaaataattgtcattttagaata----taatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||| |||||||||    |||||||||||||||||| ||||| ||| || |||||||||||||||||| |||||    
T  6609694 aaaataattgtcactttagaatactactaatgcaacatttattattttttttccattattatactcttatttattgagtttca 6609776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 439
Target Start/End: Complemental strand, 6643846 - 6643766
Alignment:
Q  359 ctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||| |||| ||| | || ||| |||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  6643846 ctcaaaataattgtcactttacaatttcaacgcagcatttatt-tatttttccactattatacccttatttattgaatttca 6643766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 21240888 - 21240786
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||     ||||||| || ||||| ||||||||||||||||||  | | ||||||||||     
T  21240888 tctcaaaataaatgtcactttagaatatcaatgcaacatttata----ttttccattattatacccttatttattgaatttcatccaacttaactactca 21240793  T
Q  457 actaact 463  Q
    |||||||    
T  21240792 actaact 21240786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 439
Target Start/End: Original strand, 53412038 - 53412123
Alignment:
Q  356 tatctcaaaataattgtcattttagaata-taatgcaacatttatta-tatttttccactaatatactcttatttattgaatttca 439  Q
    ||||| |||||||||||||||||||||||  |||| ||||| ||||| | ||||| ||||| |||||| |||||||||||||||||    
T  53412038 tatcttaaaataattgtcattttagaataccaatgtaacatctattatttttttttcactattatacttttatttattgaatttca 53412123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 463
Target Start/End: Original strand, 19265744 - 19265847
Alignment:
Q  363 aaataattgtcattttagaata-taatgcaacatttattatatttttccactaa--tatactcttatttattgaatttcactctatttaactactctact 459  Q
    |||||||||||| ||||||||| |||||||||||||| ||| |||||||| ||   || || |||| ||||||||||||| || | |||||||||| |||    
T  19265744 aaataattgtcactttagaatactaatgcaacatttagtatttttttccattatattacacccttaattattgaatttcattcaacttaactactccact 19265843  T
Q  460 aact 463  Q
    ||||    
T  19265844 aact 19265847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 409
Target Start/End: Original strand, 25233115 - 25233167
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttc 409  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||| ||||||    
T  25233115 tctcaaaataattgtcactttagaatatcaatgcaacatttattatttttttc 25233167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 4972506 - 4972587
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||| ||||| |||| ||||  |||| |||||||||||| |||||| |||| ||||| ||||||||||||||||||    
T  4972506 tctcaaaataactgtcactttacaataccaatgtaacatttattatttttttc-actattatacacttatttattgaatttca 4972587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 11907787 - 11907705
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||| |||||||| ||  ||||  |||||||||||| ||||    
T  11907787 tctcaaaataattgtcactttagaataccaatgcagcatttattatttttttccattataatacatttatttattgaacttca 11907705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 34360592 - 34360694
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 460  Q
    ||||||||||||| |||| ||||  |||  ||||||| || | ||||||||||| ||||| |||||||||||||||| | || | |||||||||| ||||    
T  34360592 aaaataattgtcactttacaataccaatttaacattttttttttttttccactattatacccttatttattgaattttattcaacttaactactccacta 34360691  T
Q  461 act 463  Q
    |||    
T  34360692 act 34360694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 52859982 - 52859881
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||| |||| ||| || ||||| |     |||||||||||| || | ||||||||||     
T  52859982 tctcaaaataattgtcactttagaataccaatgcaacatttattattttttcccattattataccc-----tattgaatttcattcaacttaactactcc 52859888  T
Q  457 actaact 463  Q
    |||||||    
T  52859887 actaact 52859881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 463
Target Start/End: Complemental strand, 17237447 - 17237378
Alignment:
Q  394 atttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaact 463  Q
    ||||||||  ||||||||||| ||||| ||||||||||||||||||  | | |||||||||| |||||||    
T  17237447 atttattagttttttccactattatacccttatttattgaatttcatccaacttaactactccactaact 17237378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 28501073 - 28500989
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatattttt--ccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||  |||||||||  ||| ||||||||||||| |||||  ||| || ||||| ||||||||||||||||||    
T  28501073 tctcaaaataattgtctctttagaataccaatacaacatttattattttttttcccattattatacccttatttattgaatttca 28500989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 35311413 - 35311329
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattata--tttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| ||||  |||||||||||||||||   |||||||| || |||||  |||||||||||||||||    
T  35311413 tctcaaaataattgtcactttacaataccaatgcaacatttattattattttttccaatattatacctttatttattgaatttca 35311329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 26147806 - 26147727
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacattta--ttatatttttccactaatatactcttatttattgaa 434  Q
    ||||||||||||||||| |||||||||  ||| |||||||||  |||| |||||||| || ||||| |||||||||||||    
T  26147806 tctcaaaataattgtcactttagaataccaatacaacatttattttatttttttccattattatacccttatttattgaa 26147727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 436
Target Start/End: Complemental strand, 4739549 - 4739474
Alignment:
Q  362 aaaataattgtcattttagaatata-atgcaacatttattatatttttccactaatatactcttatttattgaatt 436  Q
    |||||||||||| ||| |||||||  ||||||||||||||||  |||| ||||||||||| |||||| ||| ||||    
T  4739549 aaaataattgtcttttcagaatatcgatgcaacatttattattatttttcactaatatacccttattaatttaatt 4739474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 41711645 - 41711562
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttatta-tatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||||| ||||||||| |||  | ||||||||| | ||||||||||| | ||  ||||||||||||||||||    
T  41711645 tctcaaaataattgtcatattagaatataaatagagcatttattattttttttccactattgtatccttatttattgaatttca 41711562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 354 - 462
Target Start/End: Original strand, 7986905 - 7987012
Alignment:
Q  354 tatatctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaacta 452  Q
    |||||||  |||||||| ||| |||| ||||| |||| |||| |||||||||||| ||  || |||||| ||||||||| ||||||| |  | |||||||    
T  7986905 tatatcttcaaataattatcactttaaaatatcaatgtaacacttattatattttccc--tattatacttttatttatttaatttcattaaacttaacta 7987002  T
Q  453 ctctactaac 462  Q
    ||||||||||    
T  7987003 ctctactaac 7987012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 17114377 - 17114479
Alignment:
Q  362 aaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 460  Q
    ||||||||||||||||||||||| | ||||| | |||||||| |||||||| ||  ||||  |||||||||||| |||   | | |||||||||| ||||    
T  17114377 aaaataattgtcattttagaatacttatgcagcgtttattatttttttccattataatacctttatttattgaacttcctccaaattaactactccacta 17114476  T
Q  461 act 463  Q
    |||    
T  17114477 act 17114479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 12728784 - 12728836
Alignment:
Q  386 aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||| ||||| |||||||||||| ||||| |||||||||| ||||||    
T  12728784 aatgcaacattaattat-tttttccactaaaatactattatttattggatttca 12728836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 436
Target Start/End: Complemental strand, 31096308 - 31096235
Alignment:
Q  364 aataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatt 436  Q
    |||||||||||||||| ||||| ||  ||||||||||||| |||||| ||| |||||   ||||||||||||||    
T  31096308 aataattgtcattttataatatcaaaacaacatttattatttttttctactgatatatctttatttattgaatt 31096235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 439
Target Start/End: Original strand, 43237202 - 43237258
Alignment:
Q  385 taatgcaacatttattata--tttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||||   ||||| ||||| ||||| ||||||||||||||||||    
T  43237202 taatgcaacatttattattatttttttcactattatacacttatttattgaatttca 43237258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 439
Target Start/End: Original strand, 50442958 - 50443007
Alignment:
Q  390 caacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||  ||||||||||| |||| ||||||||||| ||||||    
T  50442958 caacatttattattcttttccactaacatacccttatttattgcatttca 50443007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 432
Target Start/End: Complemental strand, 50872370 - 50872329
Alignment:
Q  391 aacatttattatatttttccactaatatactcttatttattg 432  Q
    |||||| ||||| ||||||||||||||||| |||||||||||    
T  50872370 aacattcattatctttttccactaatatacccttatttattg 50872329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 52247611 - 52247510
Alignment:
Q  362 aaaataattgtcattttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctactaa 461  Q
    ||||||||||||| |||| ||   |||  ||||||||||||  |||||||  | ||||| |||||||| ||||||||| || | |||||||||| |||||    
T  52247611 aaaataattgtcactttacaaaccaatagaacatttattattcttttccatcattatacacttatttaatgaatttcattcaacttaactactccactaa 52247512  T
Q  462 ct 463  Q
    ||    
T  52247511 ct 52247510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 439
Target Start/End: Complemental strand, 20612313 - 20612277
Alignment:
Q  403 atttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  20612313 atttttccattaatatactattatttattgaatttca 20612277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 460
Target Start/End: Complemental strand, 39158046 - 39157959
Alignment:
Q  373 cattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctacta 460  Q
    ||||||| ||||| ||| |||||||||||||  |||||||  |||||| | |||||||||  |||||| || |||||||||||||||||    
T  39158046 cattttataatattaatacaacatttattattcttttccatcaatatatttttatttatttcatttcaatc-atttaactactctacta 39157959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 439
Target Start/End: Original strand, 52868908 - 52868988
Alignment:
Q  360 tcaaaataattgtcattttagaata-taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||||||| |||| |||| ||||||||||| | ||||||   |  ||||| ||||||| ||||||||||    
T  52868908 tcaaaataattgtcattttataatactaattcaacatttattgtttttttcatttgttatacccttatttgttgaatttca 52868988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 439
Target Start/End: Original strand, 54202133 - 54202211
Alignment:
Q  362 aaaataattgtcattttagaata--taatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||  |||||||||  |||  ||||||||||||| |||||| |||  |||| |||||||||||||||||||    
T  54202133 aaaataattgtccatttagaatacataacacaacatttattat-tttttctactgttatattcttatttattgaatttca 54202211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 463
Target Start/End: Original strand, 50139 - 50243
Alignment:
Q  360 tcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactctac 458  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||  |||| ||||| ||||| |||||||||| ||||||| || | |||| ||||| ||    
T  50139 tcaaaataattgtcactttagaatatcaatgcagcatttattattatttttcactattatacccttatttatttaatttcattcaacttaattactccac 50238  T
Q  459 taact 463  Q
    |||||    
T  50239 taact 50243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 34200 - 34119
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||| ||||| |||||| |||||||||| ||||||||||| |||||  |||||||||||||||||    
T  34200 tctcaaaataattgtcactttacaatatcaatgcatcatttattat-tttttccactattataccattatttattgaatttca 34119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 455
Target Start/End: Complemental strand, 252985 - 252888
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactc 455  Q
    |||||||| |||||||| |||| ||||  ||||||||||||||||| |||||| | || |||||||||||||||||||||||| || | ||||||||||    
T  252985 tctcaaaaaaattgtcactttataataccaatgcaacatttattatttttttc-attattatactcttatttattgaatttcattcaacttaactactc 252888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 441
Target Start/End: Original strand, 42813 - 42894
Alignment:
Q  360 tcaaaataattgtcattttagaatataatgcaacatttattatatttttccactaatatactcttatttattgaatttcact 441  Q
    ||||||||||||| | |||| ||||| ||||||||||| |||| |||  || |||||||||  |||||||||||||||||||    
T  42813 tcaaaataattgttactttaaaatatcatgcaacatttgttatttttcccctctaatatacatttatttattgaatttcact 42894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 359 - 439
Target Start/End: Complemental strand, 864 - 784
Alignment:
Q  359 ctcaaaataattgtcattttagaatataat-gcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    |||||||||||||||| |||| ||||  || |||||||| | ||| ||||||||||| ||||| ||||||||||||||||||    
T  864 ctcaaaataattgtcactttacaataccattgcaacattgaatat-tttttccactattatacccttatttattgaatttca 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 8164 - 8081
Alignment:
Q  358 tctcaaaataattgtcattttagaata-taatgcaacatttattatattttt-ccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||| ||||| ||| ||  |||| ||||||||||||| ||||    
T  8164 tctcaaaataattgtcactttagaataccaatgcagcatttattatttttttcccattataatacccttatttattgaacttca 8081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 5325 - 5429
Alignment:
Q  358 tctcaaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttcactctatttaactactct 456  Q
    ||||||||||||||| | ||||||||   ||| ||||||||||||| |||||||| || |||||  |||||||||||||||||  | | ||||||||||     
T  5325 tctcaaaataattgttactttagaatgccaatacaacatttattat-tttttccatta-tatacctttatttattgaatttcatccaacttaactactcc 5422  T
Q  457 actaact 463  Q
    |||||||    
T  5423 actaact 5429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 439
Target Start/End: Original strand, 76229 - 76307
Alignment:
Q  362 aaaataattgtcattttagaatat-aatgcaacatttattatatttttccactaatatactcttatttattgaatttca 439  Q
    ||||||||||||| | || ||||| ||||||  ||||||||| |||||  |||| ||||| ||||||||||||||||||    
T  76229 aaaataattgtcactctataatatcaatgcagtatttattattttttttgactattatacccttatttattgaatttca 76307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University