View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19929_low_49 (Length: 380)
Name: NF19929_low_49
Description: NF19929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19929_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 47 - 366
Target Start/End: Original strand, 4261594 - 4261913
Alignment:
| Q |
47 |
tttcactcataaatcaaattgaccagcaactaatataacggtgaattttataaaataaataaaattgagtatccagagaagnnnnnnnnnnnnnnnnnnn |
146 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4261594 |
tttcactcataaatcaaattgaccagcaactaatataacggtgaattttataaaataaataaaattgagtatccagagaagttttttaaaaaaacaaaaa |
4261693 |
T |
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| Q |
147 |
gaatcttagagtcggtgaatcaatcaaaatatgaaaactaactaaaaataaggtcattatggctaagtcatggatatcctcgttagtttttctttgcgca |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
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| T |
4261694 |
gaatcttagagtcggtgaatcaatcaaaatatgaaaactaactaaaaataaggtcattatggctaagtcatggacatcctcgttagtttgtctttgcgca |
4261793 |
T |
|
| Q |
247 |
aacttcacacttaactttctataatagcgagcataaatagatctacaacatgcaacaatagcaccaaactcagtagcacatcatgttttgtctagaggaa |
346 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
4261794 |
aacttcacacttaactttctataatagcaagcataaatagatctacaacatgcaacaatagcaccaaactcagtagcacatcatgttttgtcgagaggaa |
4261893 |
T |
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| Q |
347 |
gttatccaccatcttctttg |
366 |
Q |
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|||||||||||||||||||| |
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| T |
4261894 |
gttatccaccatcttctttg |
4261913 |
T |
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