View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19929_low_62 (Length: 319)
Name: NF19929_low_62
Description: NF19929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19929_low_62 |
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Alignment Details
Target: chr5 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 16 - 295
Target Start/End: Original strand, 39932292 - 39932571
Alignment:
| Q |
16 |
agagacatgaacaagaaatgagaaaacggagaattcatagcttggataatgaggagcgaaaaagacgaagagaaccgcaacggaataacggtgccgcgca |
115 |
Q |
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| T |
39932292 |
agagacatgaacaagaaatgagaaaacggagaattcatagcttggataatgaggagcgaaaaagacgaagagaaccgcaacggaataacggtgccgcgca |
39932391 |
T |
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| Q |
116 |
ctctaaatccttcctatcaaatctacgtgatgtcaaactaatatagtagtaatacttatatgttctgccgcttaataaaccacactgtgccaaaattcgt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39932392 |
ctctaaatccttcctatcaaatctacgtgatgtcaaactaatatagtagtaatactaatatgttctgccgcttaataaaccacactgtgccaaaattcgt |
39932491 |
T |
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| Q |
216 |
ggcaacacgtgaattttaaccaattaaaagaatgtgttaaataaaacatgtgttcgtagcatttctatacttaataataa |
295 |
Q |
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|| | ||||||||||||||||| ||||||| |||| ||||||||||||||||| |||||||| |||| |||||||||| |
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| T |
39932492 |
gggatcacgtgaattttaaccatttaaaaggatgtaataaataaaacatgtgttgttagcatttttatagttaataataa |
39932571 |
T |
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