View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19929_low_71 (Length: 302)
Name: NF19929_low_71
Description: NF19929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19929_low_71 |
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Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 285
Target Start/End: Original strand, 9148277 - 9148546
Alignment:
| Q |
16 |
atactaaatcagcactcctaaagacgaaaaaatactaaatcattgcttatagttatacattaggtttgtaatgagatgcttatagtcacttacttcacag |
115 |
Q |
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| T |
9148277 |
atactaaatcagcactcctaaagacaaaaaaatactaaatcattgcttatagttatacattaggtttgtaatgagatgcttatagtcacttacttcacag |
9148376 |
T |
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| Q |
116 |
gagatataagcaagttgtaagaattctatttttctgcaaaaagaaaattaagacctttgtttgaaggctaattgatggagcaaccaaatcagtgccaaaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9148377 |
gagatataagcaagttgtaagaattctatttttctgcaaaaagaaaattaagacctttgtttgaaggctaattgatggagcaaccaaatcagtgccaaaa |
9148476 |
T |
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| Q |
216 |
tttgatgctttccacaccaaaagattggtccataaatctgaacaataccaatcacatgatggttattcct |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9148477 |
tttgatgctttccacaccaaaagattggtccataaatctgaacaataccaatcacatgatggttattcct |
9148546 |
T |
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