View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19930_high_38 (Length: 237)
Name: NF19930_high_38
Description: NF19930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19930_high_38 |
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Alignment Details
Target: chr6 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 6946006 - 6945786
Alignment:
| Q |
1 |
gcaaattgtcaagatgtgaaggtggtggaggtgtgggaaaggaatgcggttggagagagatgggggcttcgttggtgtagagacttgtttgtgtgggaaa |
100 |
Q |
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| T |
6946006 |
gcaaattgtcaagatgtgaaggtggtggaggtgtgggaaaggaatgcggttggagagagatgggggcttcgttggtgtagagacttgtttgtgtgggaaa |
6945907 |
T |
|
| Q |
101 |
gggagcttgtgaatgctcttataacaaggggtggtggtaagggagggagtggattcgaggtcttggaagccggaggagggatgggtttttaccgtcaagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6945906 |
gggagcttgtgaatgctcttataacaaggggtggtggtaagggagggagtggattcgaggtcttggaagccggaggagggatgggtttttaccgtcaagt |
6945807 |
T |
|
| Q |
201 |
cttgttatttattgttacaag |
221 |
Q |
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||||||||||||||||||||| |
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| T |
6945806 |
cttgttatttattgttacaag |
6945786 |
T |
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