View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19930_low_39 (Length: 237)
Name: NF19930_low_39
Description: NF19930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19930_low_39 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 43948102 - 43948323
Alignment:
| Q |
1 |
attacaatgaatgtagctggtattctagcttacaaaaaggcagaatcttggcatcagcaaatgaaaataaaaacatgctctttttaggattgtttatata |
100 |
Q |
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| T |
43948102 |
attacaatgaatgtagctggtattctagcttacaaaaaggcagaatcttggcatcagcaaatgaaaataaaaacatgctctttttaggattgtttatata |
43948201 |
T |
|
| Q |
101 |
agaataggtctatgttagttgagcgaattagagttattagtttgtcaagtgttgattagttgacttgtagttgagacttgagaaggacgcaatgtgataa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
43948202 |
agaataggtctatgttagttgagcgaattagagttattagtttgtcaagtgttgattagttgagacgtagttgagacttgagaaggacgcaatgtgataa |
43948301 |
T |
|
| Q |
201 |
ttagagaaaaaatacatgttac |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
43948302 |
ttagagaaaaaatacatgttac |
43948323 |
T |
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