View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19932_high_49 (Length: 242)
Name: NF19932_high_49
Description: NF19932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19932_high_49 |
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Alignment Details
Target: chr4 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 68 - 225
Target Start/End: Complemental strand, 43936612 - 43936455
Alignment:
| Q |
68 |
cttaacctaactgtacttattttccaaccaaattctaagttaacataaatacgaagagttagcaaaaacaatcttaatgaattaaaaggttgtgaatgtg |
167 |
Q |
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| T |
43936612 |
cttaacctaactgtacttattttccaaccaaattctaagttaacataaatacggagagttagcaaaaacaatcttaatgaattaaaaggttgtgaatgtg |
43936513 |
T |
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| Q |
168 |
atggaatgaagagagtaaaataaaaggaagaggattgagtgagtgagagggaccagac |
225 |
Q |
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| T |
43936512 |
atggaatgaagagagtaaaataaaaggaagaggattgagtgagtgagagggaccagac |
43936455 |
T |
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