View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19932_low_12 (Length: 457)
Name: NF19932_low_12
Description: NF19932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19932_low_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 3 - 457
Target Start/End: Complemental strand, 3490367 - 3489913
Alignment:
| Q |
3 |
ttgttttgtatgtagagaaattctgcgatcttggaagtaggggtaatcgcttcacaccgaccaacgatgttttcttcctgtttaccacaccttcgttgcc |
102 |
Q |
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| T |
3490367 |
ttgttttataggtagagcaattctgcgaccttggaaggaggggcaatcgcttcacaccggccagtgatgttttcttcctgtttaccacaacttccttgcc |
3490268 |
T |
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| Q |
103 |
aggtttaactagctcacctggtcctgttttaatgaccttgatagtgtctgagacattagaaatccgaacctcagaatcagttgattttccgtgtttgacc |
202 |
Q |
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| T |
3490267 |
aggtttaactagctcgcaaggttcagttttaacgaccttggtcgtgtctgagacattagaaatccggacctcagaatcagttgatttcctgtgtttgacc |
3490168 |
T |
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| Q |
203 |
aatgacatctttgttggttcggaattcattgatgcacgaagtttgacacccgacgttacgacttcagcaaggttctgtggtgtacttctgtgaagttgtg |
302 |
Q |
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| T |
3490167 |
aacgacatcttggttggtttggaattcattgatgcacgaagtttgacacctgatgttacgatttcagcaaggttctgtagtgtacttctgtgaagttgtg |
3490068 |
T |
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| Q |
303 |
ttctttcagctatcctaggtattaaacttcttttcttttcttcaagtgcaagcttcatcccatatttgcaaaaatcatgacaggagcctattgaatctcg |
402 |
Q |
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||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| |
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| T |
3490067 |
ttctttcggctatccttggtattaaactttttttcttttcttcaagtgcaagcttcatcccatatttgcaaaaatcatgacaggaacctgtcgaatctcg |
3489968 |
T |
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| Q |
403 |
aagataatgaggaacaagttttccttcattatttccaggactagtttttccagaa |
457 |
Q |
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| T |
3489967 |
aagataatgaggaacaagtttttcttcattatttccaggactagtttttccagaa |
3489913 |
T |
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