View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19933_low_1 (Length: 626)

Name: NF19933_low_1
Description: NF19933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19933_low_1
NF19933_low_1
[»] scaffold0551 (1 HSPs)
scaffold0551 (269-526)||(9099-9356)
[»] scaffold0435 (2 HSPs)
scaffold0435 (269-523)||(11523-11782)
scaffold0435 (562-604)||(11818-11860)
[»] scaffold0155 (2 HSPs)
scaffold0155 (269-526)||(19488-19747)
scaffold0155 (564-619)||(19788-19843)
[»] chr8 (21 HSPs)
chr8 (275-523)||(32003194-32003443)
chr8 (269-523)||(21479021-21479278)
chr8 (275-523)||(20737117-20737369)
chr8 (275-523)||(20741986-20742238)
chr8 (275-523)||(20745675-20745927)
chr8 (310-526)||(25856190-25856410)
chr8 (314-526)||(22092337-22092553)
chr8 (383-464)||(24702852-24702933)
chr8 (381-464)||(17679013-17679096)
chr8 (402-526)||(22160098-22160223)
chr8 (562-619)||(21479317-21479375)
chr8 (565-619)||(25856446-25856500)
chr8 (560-607)||(6666868-6666915)
chr8 (562-619)||(32003086-32003143)
chr8 (560-607)||(17679182-17679229)
chr8 (560-606)||(39841833-39841879)
chr8 (562-602)||(20737037-20737077)
chr8 (562-602)||(20741906-20741946)
chr8 (562-602)||(20745595-20745635)
chr8 (381-461)||(39841664-39841744)
chr8 (384-464)||(6667014-6667094)
[»] chr7 (34 HSPs)
chr7 (269-514)||(842743-842993)
chr7 (269-514)||(849919-850169)
chr7 (269-514)||(1207923-1208173)
chr7 (269-523)||(42634101-42634358)
chr7 (269-523)||(8814621-8814878)
chr7 (269-523)||(15769773-15770032)
chr7 (269-523)||(23882424-23882679)
chr7 (327-526)||(12587828-12588033)
chr7 (308-523)||(3427539-3427758)
chr7 (286-523)||(16269143-16269386)
chr7 (310-505)||(34135971-34136170)
chr7 (381-513)||(16486007-16486140)
chr7 (381-464)||(565648-565731)
chr7 (310-507)||(13267621-13267822)
chr7 (381-464)||(4944368-4944451)
chr7 (381-464)||(13835438-13835521)
chr7 (562-609)||(23882719-23882766)
chr7 (562-619)||(42634397-42634455)
chr7 (562-619)||(15770072-15770129)
chr7 (562-619)||(8814524-8814582)
chr7 (564-618)||(34136235-34136288)
chr7 (384-464)||(5205625-5205705)
chr7 (384-464)||(27972758-27972838)
chr7 (384-464)||(29026193-29026273)
chr7 (384-464)||(38413640-38413720)
chr7 (560-607)||(565822-565868)
chr7 (561-612)||(13267875-13267925)
chr7 (560-607)||(13835301-13835348)
chr7 (564-619)||(16486196-16486250)
chr7 (560-619)||(3427816-3427876)
chr7 (560-607)||(4944539-4944586)
chr7 (397-464)||(27438003-27438070)
chr7 (560-619)||(27972934-27972992)
chr7 (562-619)||(16269437-16269493)
[»] chr5 (40 HSPs)
chr5 (269-523)||(22954515-22954773)
chr5 (269-513)||(12391063-12391310)
chr5 (269-523)||(7257796-7258053)
chr5 (269-513)||(1802308-1802555)
chr5 (283-507)||(7791015-7791242)
chr5 (302-523)||(21691978-21692203)
chr5 (308-525)||(37581799-37582020)
chr5 (310-525)||(20096522-20096738)
chr5 (309-526)||(25529607-25529828)
chr5 (310-523)||(29897670-29897887)
chr5 (310-507)||(36451259-36451460)
chr5 (381-464)||(11809903-11809986)
chr5 (381-464)||(12177056-12177139)
chr5 (560-619)||(25529520-25529578)
chr5 (381-464)||(26085819-26085902)
chr5 (562-619)||(1802204-1802261)
chr5 (562-609)||(12391355-12391402)
chr5 (562-619)||(7258092-7258150)
chr5 (562-619)||(21691882-21691939)
chr5 (381-464)||(27230094-27230177)
chr5 (561-619)||(20096779-20096836)
chr5 (578-619)||(29897560-29897601)
chr5 (564-624)||(22954816-22954875)
chr5 (562-617)||(7790902-7790957)
chr5 (560-607)||(11810074-11810120)
chr5 (560-607)||(12177228-12177274)
chr5 (560-619)||(21864078-21864137)
chr5 (381-464)||(23640145-23640228)
chr5 (381-464)||(23832658-23832741)
chr5 (381-464)||(24961261-24961344)
chr5 (560-607)||(24961431-24961478)
chr5 (560-607)||(26085998-26086044)
chr5 (560-607)||(28847697-28847744)
chr5 (561-612)||(36451156-36451206)
chr5 (384-464)||(20381015-20381095)
chr5 (384-464)||(33841403-33841483)
chr5 (394-461)||(28847836-28847903)
chr5 (560-619)||(33841578-33841635)
chr5 (560-597)||(20380881-20380917)
chr5 (560-597)||(27230282-27230318)
[»] chr3 (58 HSPs)
chr3 (269-513)||(15532961-15533208)
chr3 (269-513)||(8620629-8620876)
chr3 (269-513)||(46396333-46396580)
chr3 (283-513)||(6198591-6198824)
chr3 (269-507)||(15623870-15624112)
chr3 (275-523)||(14421746-14421998)
chr3 (275-523)||(12475932-12476182)
chr3 (269-523)||(8808706-8808961)
chr3 (269-523)||(21612135-21612396)
chr3 (308-523)||(3680695-3680914)
chr3 (308-523)||(30017251-30017470)
chr3 (310-523)||(33568846-33569063)
chr3 (323-523)||(3407999-3408203)
chr3 (309-523)||(8609187-8609405)
chr3 (310-526)||(30092732-30092948)
chr3 (310-526)||(11184349-11184569)
chr3 (402-507)||(13108761-13108867)
chr3 (402-526)||(71126-71251)
chr3 (562-619)||(11184259-11184316)
chr3 (560-619)||(8609083-8609143)
chr3 (562-618)||(12476225-12476281)
chr3 (562-612)||(14421654-14421704)
chr3 (562-619)||(46396627-46396684)
chr3 (560-608)||(3241636-3241684)
chr3 (311-442)||(14394916-14395050)
chr3 (562-609)||(8808620-8808667)
chr3 (562-609)||(21612049-21612096)
chr3 (561-619)||(30092981-30093038)
chr3 (562-619)||(15533255-15533312)
chr3 (391-464)||(17929801-17929874)
chr3 (381-464)||(9551290-9551371)
chr3 (381-485)||(14884394-14884498)
chr3 (561-612)||(13108920-13108970)
chr3 (402-526)||(23285100-23285226)
chr3 (561-619)||(23285256-23285313)
chr3 (562-619)||(6198487-6198544)
chr3 (562-619)||(8620525-8620582)
chr3 (562-619)||(15623754-15623811)
chr3 (419-526)||(12558024-12558132)
chr3 (401-464)||(3241491-3241554)
chr3 (560-607)||(8201790-8201837)
chr3 (560-607)||(41002181-41002228)
chr3 (560-607)||(41010963-41011010)
chr3 (579-619)||(71032-71072)
chr3 (560-619)||(3680584-3680644)
chr3 (381-464)||(8201633-8201714)
chr3 (380-464)||(14663341-14663425)
chr3 (384-464)||(15681126-15681206)
chr3 (560-619)||(30017153-30017213)
chr3 (381-464)||(10718750-10718833)
chr3 (560-619)||(15681303-15681360)
chr3 (561-619)||(14395164-14395221)
chr3 (561-607)||(27884347-27884392)
chr3 (394-464)||(41002316-41002386)
chr3 (394-464)||(41011098-41011168)
chr3 (560-597)||(25267380-25267416)
chr3 (391-464)||(25267519-25267592)
chr3 (579-619)||(14884508-14884548)
[»] scaffold0019 (2 HSPs)
scaffold0019 (276-523)||(16457-16708)
scaffold0019 (562-619)||(16746-16803)
[»] scaffold0327 (2 HSPs)
scaffold0327 (269-523)||(15144-15399)
scaffold0327 (560-619)||(15043-15103)
[»] chr4 (31 HSPs)
chr4 (269-514)||(16723678-16723927)
chr4 (269-514)||(14874315-14874563)
chr4 (269-464)||(16365212-16365410)
chr4 (269-523)||(20557365-20557620)
chr4 (269-523)||(22708334-22708590)
chr4 (275-526)||(15570620-15570870)
chr4 (275-526)||(15574748-15574998)
chr4 (310-526)||(3385411-3385631)
chr4 (269-524)||(3831711-3831967)
chr4 (269-464)||(14921798-14921995)
chr4 (286-523)||(3360690-3360934)
chr4 (283-410)||(39531042-39531172)
chr4 (310-505)||(9187864-9188063)
chr4 (269-464)||(12512506-12512702)
chr4 (565-619)||(3385667-3385721)
chr4 (315-513)||(12509042-12509246)
chr4 (562-612)||(16723976-16724026)
chr4 (563-619)||(9187743-9187798)
chr4 (560-619)||(14874210-14874268)
chr4 (562-609)||(16365075-16365122)
chr4 (562-609)||(22708247-22708294)
chr4 (564-612)||(15570906-15570954)
chr4 (564-612)||(15575034-15575082)
chr4 (562-603)||(3832006-3832047)
chr4 (564-612)||(14921667-14921715)
chr4 (560-607)||(8099348-8099395)
chr4 (384-464)||(26216667-26216747)
chr4 (394-461)||(8099189-8099256)
chr4 (381-464)||(33182816-33182899)
chr4 (562-619)||(20557260-20557320)
chr4 (560-597)||(26216845-26216881)
[»] chr6 (45 HSPs)
chr6 (269-526)||(18946249-18946506)
chr6 (269-514)||(618986-619234)
chr6 (269-513)||(24146536-24146783)
chr6 (269-523)||(1546259-1546518)
chr6 (269-523)||(20043730-20043988)
chr6 (269-523)||(16820639-16820895)
chr6 (310-523)||(27071118-27071332)
chr6 (269-512)||(18437858-18438105)
chr6 (310-523)||(20455903-20456117)
chr6 (269-523)||(20053656-20053910)
chr6 (269-523)||(27514342-27514598)
chr6 (310-526)||(19716636-19716856)
chr6 (310-507)||(22776055-22776253)
chr6 (281-462)||(22326956-22327135)
chr6 (310-479)||(15649475-15649649)
chr6 (181-247)||(20898455-20898521)
chr6 (381-464)||(5990430-5990513)
chr6 (562-617)||(27514248-27514303)
chr6 (562-619)||(22326814-22326871)
chr6 (562-619)||(24146830-24146887)
chr6 (562-618)||(18437750-18437806)
chr6 (381-464)||(16583175-16583258)
chr6 (381-464)||(16612122-16612205)
chr6 (562-609)||(16820934-16820981)
chr6 (562-619)||(619282-619340)
chr6 (565-619)||(19716546-19716600)
chr6 (562-619)||(1546162-1546219)
chr6 (562-619)||(20456160-20456217)
chr6 (560-619)||(20053948-20054006)
chr6 (381-464)||(28356165-28356248)
chr6 (561-619)||(18946548-18946605)
chr6 (562-619)||(27071389-27071446)
chr6 (384-464)||(16638211-16638291)
chr6 (381-464)||(28307360-28307443)
chr6 (562-619)||(18912454-18912511)
chr6 (579-619)||(20044032-20044072)
chr6 (192-244)||(21007663-21007714)
chr6 (381-464)||(25502574-25502655)
chr6 (560-607)||(5990297-5990344)
chr6 (560-607)||(16638074-16638121)
chr6 (397-464)||(27054850-27054917)
chr6 (481-523)||(22326912-22326954)
chr6 (560-609)||(15649729-15649777)
chr6 (560-597)||(28307232-28307268)
chr6 (560-597)||(28356037-28356073)
[»] scaffold1197 (2 HSPs)
scaffold1197 (269-523)||(204-462)
scaffold1197 (565-619)||(107-161)
[»] scaffold0114 (2 HSPs)
scaffold0114 (269-514)||(30500-30749)
scaffold0114 (565-619)||(30802-30856)
[»] chr1 (27 HSPs)
chr1 (269-523)||(19372191-19372446)
chr1 (269-514)||(6200606-6200855)
chr1 (269-514)||(14816678-14816928)
chr1 (302-523)||(22430888-22431113)
chr1 (310-526)||(35072560-35072780)
chr1 (181-269)||(41332061-41332149)
chr1 (310-462)||(1958898-1959054)
chr1 (402-526)||(2339098-2339223)
chr1 (381-464)||(31556077-31556160)
chr1 (185-259)||(41342265-41342340)
chr1 (381-455)||(2388625-2388699)
chr1 (381-464)||(13467734-13467817)
chr1 (381-464)||(13472728-13472811)
chr1 (562-619)||(6200895-6200952)
chr1 (562-619)||(14816972-14817029)
chr1 (562-619)||(19372093-19372150)
chr1 (57-127)||(41332203-41332273)
chr1 (562-619)||(1958755-1958813)
chr1 (562-612)||(22430797-22430847)
chr1 (564-600)||(9296430-9296466)
chr1 (269-456)||(9296582-9296774)
chr1 (381-464)||(31543977-31544060)
chr1 (560-607)||(31555942-31555988)
chr1 (561-607)||(31543842-31543888)
chr1 (560-607)||(13467600-13467646)
chr1 (560-607)||(13472594-13472640)
chr1 (481-523)||(1958854-1958896)
[»] chr2 (25 HSPs)
chr2 (269-523)||(24693406-24693664)
chr2 (269-523)||(24702399-24702655)
chr2 (402-507)||(20278045-20278151)
chr2 (560-607)||(25498514-25498561)
chr2 (381-464)||(25498632-25498715)
chr2 (561-619)||(20278206-20278263)
chr2 (562-624)||(24693306-24693368)
chr2 (384-464)||(24289149-24289229)
chr2 (381-464)||(15949118-15949201)
chr2 (560-607)||(20614621-20614668)
chr2 (560-607)||(24289014-24289061)
chr2 (394-464)||(21117049-21117119)
chr2 (564-607)||(15949294-15949337)
chr2 (381-464)||(16277502-16277585)
chr2 (560-607)||(35142504-35142551)
chr2 (381-464)||(35142639-35142722)
chr2 (560-607)||(42570766-42570813)
chr2 (562-624)||(24702290-24702352)
chr2 (384-464)||(3762508-3762588)
chr2 (381-464)||(20614758-20614842)
chr2 (384-464)||(30689385-30689465)
chr2 (381-461)||(42570594-42570674)
chr2 (560-619)||(3762686-3762743)
chr2 (397-464)||(21856067-21856134)
chr2 (560-597)||(30689561-30689597)
[»] scaffold0441 (2 HSPs)
scaffold0441 (269-503)||(7394-7632)
scaffold0441 (564-612)||(7280-7329)
[»] scaffold0357 (2 HSPs)
scaffold0357 (269-512)||(9783-10030)
scaffold0357 (562-619)||(9668-9726)
[»] scaffold0138 (2 HSPs)
scaffold0138 (269-523)||(11559-11816)
scaffold0138 (562-619)||(11463-11520)
[»] scaffold0243 (2 HSPs)
scaffold0243 (269-523)||(17870-18128)
scaffold0243 (562-595)||(17796-17829)
[»] scaffold0068 (2 HSPs)
scaffold0068 (302-523)||(21707-21932)
scaffold0068 (562-619)||(21971-22028)
[»] scaffold0600 (2 HSPs)
scaffold0600 (269-526)||(9402-9656)
scaffold0600 (562-619)||(9313-9370)
[»] scaffold0004 (2 HSPs)
scaffold0004 (269-523)||(191127-191382)
scaffold0004 (562-619)||(191426-191483)
[»] scaffold1661 (1 HSPs)
scaffold1661 (269-472)||(523-730)
[»] scaffold0029 (3 HSPs)
scaffold0029 (269-472)||(89013-89220)
scaffold0029 (564-612)||(75486-75535)
scaffold0029 (481-526)||(75576-75621)
[»] scaffold0362 (2 HSPs)
scaffold0362 (269-514)||(475-721)
scaffold0362 (568-619)||(775-827)
[»] scaffold0582 (2 HSPs)
scaffold0582 (286-526)||(4135-4381)
scaffold0582 (562-619)||(4413-4469)
[»] scaffold0014 (3 HSPs)
scaffold0014 (308-524)||(183079-183300)
scaffold0014 (269-523)||(913-1171)
scaffold0014 (562-619)||(816-873)
[»] scaffold0202 (2 HSPs)
scaffold0202 (364-514)||(24260-24411)
scaffold0202 (560-619)||(24458-24517)
[»] scaffold0306 (2 HSPs)
scaffold0306 (310-505)||(18623-18822)
scaffold0306 (561-619)||(18512-18569)
[»] scaffold0125 (1 HSPs)
scaffold0125 (308-507)||(12665-12853)
[»] scaffold0005 (1 HSPs)
scaffold0005 (380-526)||(302385-302532)
[»] scaffold0389 (1 HSPs)
scaffold0389 (385-464)||(3759-3838)
[»] scaffold0183 (2 HSPs)
scaffold0183 (310-514)||(32723-32923)
scaffold0183 (564-619)||(32618-32674)
[»] scaffold0157 (2 HSPs)
scaffold0157 (269-464)||(8205-8401)
scaffold0157 (315-513)||(11231-11435)
[»] scaffold0320 (2 HSPs)
scaffold0320 (310-464)||(3215-3372)
scaffold0320 (561-619)||(3471-3528)
[»] scaffold0132 (2 HSPs)
scaffold0132 (310-507)||(32267-32468)
scaffold0132 (563-612)||(32166-32214)
[»] scaffold0009 (1 HSPs)
scaffold0009 (327-444)||(154425-154546)
[»] scaffold0015 (1 HSPs)
scaffold0015 (562-619)||(166013-166070)
[»] scaffold0027 (2 HSPs)
scaffold0027 (384-464)||(59538-59618)
scaffold0027 (560-607)||(59705-59752)
[»] scaffold0083 (1 HSPs)
scaffold0083 (381-464)||(19582-19665)
[»] scaffold0044 (1 HSPs)
scaffold0044 (381-464)||(70570-70653)
[»] scaffold0031 (1 HSPs)
scaffold0031 (560-619)||(28515-28573)
[»] scaffold0016 (2 HSPs)
scaffold0016 (560-607)||(19532-19579)
scaffold0016 (394-464)||(19651-19721)
[»] scaffold0001 (2 HSPs)
scaffold0001 (565-612)||(99789-99836)
scaffold0001 (436-514)||(99889-99968)
[»] scaffold0023 (1 HSPs)
scaffold0023 (391-464)||(142380-142453)
[»] scaffold0605 (2 HSPs)
scaffold0605 (381-464)||(4736-4819)
scaffold0605 (560-607)||(4906-4952)
[»] scaffold0002 (2 HSPs)
scaffold0002 (560-607)||(125630-125677)
scaffold0002 (417-464)||(125765-125812)


Alignment Details
Target: scaffold0551 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 269 - 526
Target Start/End: Original strand, 9099 - 9356
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||  |||||||||| |||||||||||||||||||||    
T  9099 tctttgtaagcgattgccatcttctggactatcttcatgatttttgtttgtaactttgacgactatactgccccagtatgtgagagatctcatcaggagt 9198  T
Q  369 ctcttcattcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgatttattg 468  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9199 ctcttcattcttttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgatttattg 9298  T
Q  469 ttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataattatta 526  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  9299 ttgactttgacaagtaaatgaaagttatgattatgcagacatttgacaatgattatta 9356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 174; Significance: 3e-93; HSPs: 2)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 269 - 523
Target Start/End: Original strand, 11523 - 11782
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||    
T  11523 tctttgtaagcgattgccatcttctggactatcttcatgatttttgtttgtagctttgacggcttatgatgccccagtatgtgagagatcttatcgggag 11622  T
Q  368 tctcttcattcat---ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||| |   |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11623 tctcttcattcttgtcttcttcggcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 11722  T
Q  465 -attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
     ||| ||||||||||| |||||||  |||||||||||||||||| |||||||||| ||||    
T  11723 gattattgactttgacaagtaaatacaagttatgattatgcagatatttgacaatgatta 11782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 562 - 604
Target Start/End: Original strand, 11818 - 11860
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacc 604  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  11818 agaaaaagcacaaaatgaagacaaagtcgggatcaaaacgacc 11860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 163; Significance: 1e-86; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 269 - 526
Target Start/End: Original strand, 19488 - 19747
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||||   || |||||    
T  19488 tctttgtaagcgattgccatcttctggactattttcatgatttttgtttgtagctttgactgcta-gatgccccagtatgcgagagatcatgtcgggagt 19586  T
Q  369 ctcttcattcat---ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattta 465  Q
    |||||||||| |    ||||||||||| |||||||||||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  19587 ctcttcattcttgtcctcttcagcttcagatacaaggaactcaaagttgggagagagtacatggttattgtgttcaacgggtttattaatgcatgattta 19686  T
Q  466 ttgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataattatta 526  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||||||    
T  19687 ttgttgattttgacaagtaaatgaaagttatgattatgcagacatttgaaaatgattatta 19747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 564 - 619
Target Start/End: Original strand, 19788 - 19843
Alignment:
Q  564 aaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  19788 aaaaagcacaaaatgaaaacaaagtcgggatcaaaacgacatttttattaatgatg 19843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 162; Significance: 4e-86; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 275 - 523
Target Start/End: Complemental strand, 32003443 - 32003194
Alignment:
Q  275 taagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttc 374  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||    
T  32003443 taagcgattgccatcttctggactatcttcatgatttctgtttgtagctttgacggctatgatgccccagcatgtgagagatctcatcgggagcctcttc 32003344  T
Q  375 attcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgac 473  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  || ||||     
T  32003343 attcttttcttcagcttcgggtacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttatcaatgcatgatttggttattgat 32003244  T
Q  474 tttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  32003243 tttgacaagtaagtacaagttatgattatgcagatatttgagaatgatta 32003194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 269 - 523
Target Start/End: Original strand, 21479021 - 21479278
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttg-tagctttgacggctatgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||  ||| |||    
T  21479021 tctttgtaagtgagtgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgag 21479119  T
Q  368 tctcttcattcatttct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21479120 tctcttcattcatgtctctttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 21479219  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    |||||||| |||||| |||||||  |||||||||||||||||| |||||| ||| ||||    
T  21479220 attgttgattttgacaagtaaatataagttatgattatgcagatatttgagaatgatta 21479278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 275 - 523
Target Start/End: Complemental strand, 20737369 - 20737117
Alignment:
Q  275 taagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttc 374  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |  |  |||||||||||||| |||| ||||||    
T  20737369 taagcgattgccatcttctggactatcttcatgatttttgtttgtagctatgacggctatgatgccctaacatatgagagatctcatcgggagcctcttc 20737270  T
Q  375 a--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgtt 470  Q
    |  ||| | |||||||| ||| |||||||||||||||||||||| ||| |||||||||| ||||||||||| | ||||||||||| ||||||| ||| ||    
T  20737269 actttcctcttcttcagtttcagatacaaggaactcaaagttggtagacagtacatggttaatgtgttcaaggggtttattaatggatgatttgattatt 20737170  T
Q  471 gactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    || |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  20737169 gattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 20737117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 275 - 523
Target Start/End: Complemental strand, 20742238 - 20741986
Alignment:
Q  275 taagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttc 374  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |  |||||||||| ||| | || ||||||    
T  20742238 taagcgattaccatcttctagactatcttcatgatttttgtttgtagctttgacggctatgatgccccagcatatgagagatctaatcggcagcctcttc 20742139  T
Q  375 a--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgtt 470  Q
    |  ||| | |||||||| ||| ||||||||||||||||||| || |||||| ||||||| ||||||||||||| ||||||||||||||||||| ||| ||    
T  20742138 actttcctcttcttcagtttcagatacaaggaactcaaagtcggtagagaggacatggttaatgtgttcaacgggtttattaatgcatgatttgattatt 20742039  T
Q  471 gactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    || |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  20742038 gattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 20741986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 275 - 523
Target Start/End: Complemental strand, 20745927 - 20745675
Alignment:
Q  275 taagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttc 374  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |  |  |||||||||||||| |||| ||||||    
T  20745927 taagcgattgccatcttctggactatcttcatgatttttgtttgtagctatgacggctatgatgccctaacatatgagagatctcatcgggagcctcttc 20745828  T
Q  375 a--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgtt 470  Q
    |  ||| | |||||||| ||| |||||||||||||||||||||| ||| |||||||||| ||||||||||| | ||||||||||| ||||||| ||| ||    
T  20745827 actttcctcttcttcagtttcagatacaaggaactcaaagttggtagacagtacatggttaatgtgttcaaggggtttattaatggatgatttgattatt 20745728  T
Q  471 gactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    || |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  20745727 gattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 20745675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 310 - 526
Target Start/End: Original strand, 25856190 - 25856410
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcat---ttcttcagcttcggatacaaggaact 406  Q
    ||||||| | |||||||||||||| |||||||||||| ||||||||||   || ||||||||||||||| |   ||||||||||||| ||||||||||||    
T  25856190 ttttgttcgcagctttgacggctaagatgccccagtatgtgagagatcatgtcgggagtctcttcattcttgtcttcttcagcttcgaatacaaggaact 25856289  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattta-ttgttgactttgacgagtaaatgaaagttatgattatgca 505  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||| |||| | |||||    |||||||| |||||||    
T  25856290 caaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgatttatttattgattttggcaagtaagaacaagttatggttatgca 25856389  T
Q  506 gacatttgacaataattatta 526  Q
    || |||||| ||| |||||||    
T  25856390 gatatttgaaaatgattatta 25856410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 314 - 526
Target Start/End: Original strand, 22092337 - 22092553
Alignment:
Q  314 gtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcatt---catttcttcagcttcggatacaaggaactcaaa 410  Q
    ||||| ||||||||| |||| ||| |||||||| ||||||||||||||| |||||| |||||||   |   |||||| |||| || | |  |||||||||    
T  22092337 gtttgcagctttgactgctaagattccccagtatgtgagagatctcatcgggagtcccttcattttcctcctcttcatcttcagacatagagaactcaaa 22092436  T
Q  411 gttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgcagaca 509  Q
    |||||||||||||||||||| | ||||||||||| |||||||| ||||||||||  || |||| |||||||||||||||||||||| ||||||||| | |    
T  22092437 gttggaagagagtacatggttattgtgttcaacgggtttattattgcatgatttggttattgattttgacgagtaaatgaaagttaagattatgcacata 22092536  T
Q  510 tttgacaataattatta 526  Q
    ||||| ||| |||||||    
T  22092537 tttgaaaatgattatta 22092553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 24702852 - 24702933
Alignment:
Q  383 cttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| |||| | ||| ||||||||||||||| |||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  24702852 cttcagtttcgaacacagggaactcaaagttgggagagagtacaaggttaatgtgttcaacgagtttatcaatgcatgattt 24702933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 17679013 - 17679096
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| ||||||||||||||||||| || |  |||||||||| ||| || |||||||||| |||||||||||||||||||    
T  17679013 ttcttcagcctcggatacaaggaactcaaggtcgagagagagtacagggttaaagtgttcaacgggtttattaatgcatgattt 17679096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 402 - 526
Target Start/End: Original strand, 22160098 - 22160223
Alignment:
Q  402 gaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgatt 500  Q
    |||||||||||||| ||||||||||| || | | ||||||||| ||||||||||||||||||| ||| || | |||||| ||||| |  ||| |||||||    
T  22160098 gaactcaaagttgggagagagtacatagttattatgttcaacgggtttattaatgcatgatttgattattcattttgacaagtaagtacaagctatgatt 22160197  T
Q  501 atgcagacatttgacaataattatta 526  Q
    ||||||| || ||| ||| |||||||    
T  22160198 atgcagaaatatgagaatgattatta 22160223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 21479317 - 21479375
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatc-aaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  21479317 agaaaaagcacaaaataaaagcaaagtcgggatcaaaaacgacctttttattaatgatg 21479375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 565 - 619
Target Start/End: Original strand, 25856446 - 25856500
Alignment:
Q  565 aaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  25856446 aaaaacacaaaatgaaaacaaagtcgggatcaaaacgacctttttattaatgatg 25856500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 6666915 - 6666868
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||    
T  6666915 ccagaaaaagcacaaaataaaaacaaagtcgggatcgagacgaccttt 6666868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 32003143 - 32003086
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| ||||||||| | |||||||||||| ||||||||||||||||||||| ||||||    
T  32003143 agaagaagcacaaagtgaaaacaaagtcgagatcaaaacgacctttttattaatgatg 32003086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Original strand, 17679182 - 17679229
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||    
T  17679182 ccagaaaaagcacaaaataaaaacaaggtcgggatcaaggcgaccttt 17679229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 560 - 606
Target Start/End: Original strand, 39841833 - 39841879
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctt 606  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||    
T  39841833 ccagaaaaagcacaaaataaaaacaaggtcgggatcaaggcgacctt 39841879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 562 - 602
Target Start/End: Complemental strand, 20737077 - 20737037
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacga 602  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  20737077 agaagaagcacaaaatgaaaacaaagtcgggatcaaaacga 20737037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 562 - 602
Target Start/End: Complemental strand, 20741946 - 20741906
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacga 602  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  20741946 agaagaagcacaaaatgaaaacaaagtcgggatcaaaacga 20741906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 562 - 602
Target Start/End: Complemental strand, 20745635 - 20745595
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacga 602  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  20745635 agaagaagcacaaaatgaaaacaaagtcgggatcaaaacga 20745595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 461
Target Start/End: Original strand, 39841664 - 39841744
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatga 461  Q
    |||||||||  | ||||||||||||||||||| |  | |||||||| |||  | |||||||||| ||||||||||||||||    
T  39841664 ttcttcagccccagatacaaggaactcaaagtcgagaaagagtacaaggtttaagtgttcaacgggtttattaatgcatga 39841744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 464
Target Start/End: Complemental strand, 6667094 - 6667014
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| || ||||||| ||||||||  | |  |||||||||| ||| || |||||||||| ||||||| |||||||||||    
T  6667094 ttcagcctcagatacaaagaactcaagatcgagagagagtacagggttaaagtgttcaacgggtttattgatgcatgattt 6667014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 4e-83; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 269 - 514
Target Start/End: Complemental strand, 842993 - 842743
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| ||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  842993 tctttgtaagcgattgccatcttctagactatctacatgatttttgtttgtagctttgacggcttatgatgccccagtatgtgagagatctcatcgggag 842894  T
Q  368 tctcttcattcat---ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  842893 tctcttcattcttgtcttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 842794  T
Q  465 -attgttgactttgacgagtaaatgaaagttatgattatgcagacatttga 514  Q
     ||| |||| |||||| ||||| |  |||||||||||||| ||| ||||||    
T  842793 gattattgattttgacaagtaagtataagttatgattatgtagatatttga 842743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 269 - 514
Target Start/End: Complemental strand, 850169 - 849919
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| ||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  850169 tctttgtaagcgattgccatcttctagactatctacatgatttttgtttgtagctttgacggcttatgatgccccagtatgtgagagatctcatcgggag 850070  T
Q  368 tctcttcattcat---ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  850069 tctcttcattcttgtcttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 849970  T
Q  465 -attgttgactttgacgagtaaatgaaagttatgattatgcagacatttga 514  Q
     ||| |||| |||||| ||||| |  |||||||||||||| ||| ||||||    
T  849969 gattattgattttgacaagtaagtataagttatgattatgtagatatttga 849919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 269 - 514
Target Start/End: Complemental strand, 1208173 - 1207923
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| ||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  1208173 tctttgtaagcgattgccatcttctagactatctacatgatttttgtttgtagctttgacggcttatgatgccccagtatgtgagagatctcatcgggag 1208074  T
Q  368 tctcttcattcat---ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1208073 tctcttcattcttgtcttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 1207974  T
Q  465 -attgttgactttgacgagtaaatgaaagttatgattatgcagacatttga 514  Q
     ||| |||| |||||| ||||| |  |||||||||||||| ||| ||||||    
T  1207973 gattattgattttgacaagtaagtataagttatgattatgtagatatttga 1207923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 269 - 523
Target Start/End: Original strand, 42634101 - 42634358
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttg-tagctttgacggctatgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||  ||| |||    
T  42634101 tctttgtaagtgagtgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgag 42634199  T
Q  368 tctcttcattcatttct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42634200 tctcttcattcatgtctctttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 42634299  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    |||||||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  42634300 attgttgattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 42634358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 8814878 - 8814621
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttg-tagctttgacggctatgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||  ||| |||    
T  8814878 tctttgtaagtgagtgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgag 8814780  T
Q  368 tctcttcattcatttct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| ||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8814779 tctcttcatccatgtctctttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 8814680  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    |||||||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  8814679 attgttgattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 8814621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 269 - 523
Target Start/End: Original strand, 15769773 - 15770032
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| || ||||    
T  15769773 tctttgtaagcgattgccatcttctggactatcttcatgatttttgtttgtagctttgacggcttatgatgccccagtatgtgagagatctcgtcgggag 15769872  T
Q  368 tctcttcatt---catttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     |||||||||   |  ||||||| |||||| ||||  ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  15769873 cctcttcattttcctcttcttcatcttcggttacagagaactcaaagttggaagagagtacacggtaaatgtgttcaacgggtttattaatgcatgattt 15769972  T
Q  465 a-ttgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    | || |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  15769973 atttattgattttgacaagtaagtacaagttatgattatgcagatatttgagaatgatta 15770032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 269 - 523
Target Start/End: Original strand, 23882424 - 23882679
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||||||||    ||||||||||||| |||||||||||||| | ||||||||||||| ||||    
T  23882424 tctttgtaagcgattgccatcctctgaactatcttcatgatttttgt----agctttgacggcttatgatgccccagtatgcgagagatctcatcgggag 23882519  T
Q  368 tctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     |||||||  ||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| ||||||| |||||||||||||||||||    
T  23882520 cctcttcactttcctcttcttcagcttcggatacaaggaactcaaagttggtagagagtacatggttattgttttcaacgggtttattaatgcatgattt 23882619  T
Q  465 -attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
     ||| |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  23882620 gattattgattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 23882679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 327 - 526
Target Start/End: Complemental strand, 12588033 - 12587828
Alignment:
Q  327 acggctatgatgccccagtaagtgagagatctcatcaggagtctcttcatt--cat-ttcttcagcttcggatacaaggaactcaaagttggaagagag- 422  Q
    ||||||| |||||||||||| | ||||||||||||| ||||||||||||||  | | ||||||| ||||||||||||||||||||||||||||||||||     
T  12588033 acggctaagatgccccagtatgcgagagatctcatcgggagtctcttcattttcttcttcttcatcttcggatacaaggaactcaaagttggaagagaga 12587934  T
Q  423 tacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttga-ctttgacgagtaaatgaaagttatgattatgcagacatttgacaataa 520  Q
    |||||||| | ||||||||||| ||||||||||||||||||| ||| ||||  |||||| ||||||||||||||||||||||||||| |||||| ||| |    
T  12587933 tacatggttattgtgttcaacgggtttattaatgcatgatttgattattgatttttgacaagtaaatgaaagttatgattatgcagatatttgaaaatga 12587834  T
Q  521 ttatta 526  Q
    ||||||    
T  12587833 ttatta 12587828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 308 - 523
Target Start/End: Original strand, 3427539 - 3427758
Alignment:
Q  308 atttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcatt---catttcttcagcttcggatacaaggaa 404  Q
    |||||||||||||| || |||||||| ||||||||||||||  |||||||||||| |||||||| |||||   |  ||||||| ||||||| | |  |||    
T  3427539 atttttgtttgtagattcgacggctaagatgccccagtaagcaagagatctcatcgggagtctcctcattttcctcttcttcatcttcggacatagagaa 3427638  T
Q  405 ctcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgatt-tattgttgactttgacgagtaaatgaaagttatgattatg 503  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||  ||| |||| ||||||  ||||||||||||||||||||||    
T  3427639 ctcaaagttggaagagagtacatggttactgtgttcaacgggtttattaatgcatgattcgattattgattttgacatgtaaatgaaagttatgattatg 3427738  T
Q  504 cagacatttgacaataatta 523  Q
    |||| |||||| ||| ||||    
T  3427739 cagatatttgaaaatgatta 3427758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 286 - 523
Target Start/End: Original strand, 16269143 - 16269386
Alignment:
Q  286 catcttctggactattttcatgat--ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttca--ttcatt 381  Q
    |||||||||||| || ||| ||||  ||||||||| ||||| ||||| || |||||||||| | | ||||||||| |||  |||||||||||  ||| |     
T  16269143 catcttctggacaatattcttgatatttttgtttgcagcttcgacgggtaagatgccccagcatgcgagagatcttatccagagtctcttcactttcctc 16269242  T
Q  382 -tcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgac 479  Q
     |||||| ||||||| | |  ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| ||| |||| ||||||    
T  16269243 atcttcatcttcggacatagagaactcaaagttggaagagagtacatggttattgtgttcaacgggtttattaatgcatgatttgatttttgattttgac 16269342  T
Q  480 gagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
     ||||||||||| ||||||||||||||| |||||| ||| ||||    
T  16269343 aagtaaatgaaaattatgattatgcagatatttgaaaatgatta 16269386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 310 - 505
Target Start/End: Original strand, 34135971 - 34136170
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatttcttc---agcttcggatacaaggaact 406  Q
    ||||||||| |||||||||||||| |||||||||||  | |||||||||  |  ||||||| |||||||   |||||   | ||||||  |||  |||||    
T  34135971 ttttgtttgcagctttgacggctaagatgccccagtgggcgagagatcttgttgggagtcttttcattctcctcttctccatcttcggtcacagagaact 34136070  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgca 505  Q
    ||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||| ||| |||| |||||| ||||| |  ||||||||||||||||    
T  34136071 caaagttgggagagagtacatggttattgtgttcaacgggtttattaatgcatgatttgattattgattttgacaagtaagtacaagttatgattatgca 34136170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 381 - 513
Target Start/End: Original strand, 16486007 - 16486140
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgat-ttattgttgactttgac 479  Q
    ||||||||| || ||||||| |||||||||||| |||||||||| | ||| || |||||||| | ||||||||||||||||| | ||| |||  |||| |    
T  16486007 ttcttcagcctcagatacaaagaactcaaagtttgaagagagtatagggttaacgtgttcaatgggtttattaatgcatgatatgattattggttttgtc 16486106  T
Q  480 gagtaaatgaaagttatgattatgcagacatttg 513  Q
     |||| || |||||||||||||||||||||||||    
T  16486107 aagtatattaaagttatgattatgcagacatttg 16486140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 565648 - 565731
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||| | |||||||||||||||||||||| |  ||||||||||||||  | |||||||||| |||||||||||||||||||    
T  565648 ttcttcaacctcggatacaaggaactcaaagtcgagagagagtacatggtttaagtgttcaacgggtttattaatgcatgattt 565731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 310 - 507
Target Start/End: Original strand, 13267621 - 13267822
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatttcttc---agcttcggatacaaggaact 406  Q
    ||||||||| |||||||||||||| |||||| ||||  | |||||||||     |||| ||||||||||   |||||   | ||||||  |||  |||||    
T  13267621 ttttgtttgcagctttgacggctaagatgcctcagtgggcgagagatcttgctgggagcctcttcattctcctcttccttatcttcggtcacagagaact 13267720  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgca 505  Q
    ||||||||| ||||||||||| || | | ||||||||| ||||||||||||||||||| ||| |||| |||||| ||||| |  ||| ||||||||||||    
T  13267721 caaagttgggagagagtacatagttattatgttcaacgggtttattaatgcatgatttgattattgattttgacaagtaagtacaagctatgattatgca 13267820  T
Q  506 ga 507  Q
    ||    
T  13267821 ga 13267822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 4944368 - 4944451
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||| ||| |||||||||||||||||||||| |  |||||||||| |||  | |||||||||| |||||||||||||||||||    
T  4944368 ttctttagcctcggatacaaggaactcaaagtcgagagagagtacagggtttaagtgttcaacgggtttattaatgcatgattt 4944451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 13835521 - 13835438
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||| ||| || ||||||| |||||||| || |  |||||||||||||| || ||||||||||||||||||||||||||||||    
T  13835521 ttcttaagcctcagatacaaagaactcaaggtcgagagagagtacatggttaaagtgttcaacgagtttattaatgcatgattt 13835438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 609
Target Start/End: Original strand, 23882719 - 23882766
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttttt 609  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  23882719 agaaaaagcacaaaataaaagcaaagtcgggatcaaaacgaccttttt 23882766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 42634397 - 42634455
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatc-aaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  42634397 agaaaaagcacaaaataaaagcaaagtcgggatcaaaaacgacctttttattaatgatg 42634455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 15770072 - 15770129
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  15770072 agaagaagcacaaaataaaaataaagttgggatcaaaacgacctttttattaatgatg 15770129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 8814582 - 8814524
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatc-aaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||    
T  8814582 agaaaaagcacaaaataaaagcaaagtcgggatcaaaaacgacatttttattaatgatg 8814524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 564 - 618
Target Start/End: Original strand, 34136235 - 34136288
Alignment:
Q  564 aaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgat 618  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||    
T  34136235 aaaaagcacaaaataaaat-aaagtcgggatcaaaacgacctttttattaatgat 34136288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 464
Target Start/End: Original strand, 5205625 - 5205705
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| ||||||||||||||||||||||    |||||||||| |||  | |||||||| | |||||||||||||||||||    
T  5205625 ttcagcctcggatacaaggaactcaaagtcaagagagagtacagggtttaagtgttcaatgggtttattaatgcatgattt 5205705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 464
Target Start/End: Original strand, 27972758 - 27972838
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| ||||||||||||||||||| || |  || ||||| ||| | || |||||||||| |||||||||||||||||||    
T  27972758 ttcagcctcggatacaaggaactcaaggtcgagagggagtatatgattaaagtgttcaacgggtttattaatgcatgattt 27972838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 464
Target Start/End: Complemental strand, 29026273 - 29026193
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| ||||||||||||||||||||||    || ||||||| | | || |||||||||| |||||||||||||||||||    
T  29026273 ttcagcctcggatacaaggaactcaaagtcaagagggagtacaggattaaagtgttcaacgggtttattaatgcatgattt 29026193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 464
Target Start/End: Complemental strand, 38413720 - 38413640
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| |||||||||||||||||||||| |  || ||||| | | | || |||||||||| |||||||||||||||||||    
T  38413720 ttcagcctcggatacaaggaactcaaagtcgagagggagtataggattaaagtgttcaacgggtttattaatgcatgattt 38413640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Original strand, 565822 - 565868
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  565822 ccagaaaaagcacaaaataaaa-caaagtcgggatcaagacgaccttt 565868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 612
Target Start/End: Original strand, 13267875 - 13267925
Alignment:
Q  561 cagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttatt 612  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  13267875 cagaaaaagcacaaaataaaat-aaagtcgggataaaaacgacctttttatt 13267925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 13835348 - 13835301
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||    
T  13835348 ccagaaaaagcacaaaataaaaacaaggtcgggatcgagacgaccttt 13835301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 564 - 619
Target Start/End: Original strand, 16486196 - 16486250
Alignment:
Q  564 aaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||| | ||||||||||||||||||||| |||||| ||||||    
T  16486196 aaaaagcacaaaataaaa-cgaagtcgggatcaaaacgacctctttattaatgatg 16486250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 3427816 - 3427876
Alignment:
Q  560 ccagaaaaagcacaaaataaaaa-caaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||| |||||||||| ||||||||||||| || |||| |||||||| ||||||    
T  3427816 ccagaaaaagcaaaaaataaaaagcaaagtcgggatcgaagcgacttttttattaatgatg 3427876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 560 - 607
Target Start/End: Original strand, 4944539 - 4944586
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||| |||||||| |||||||||||||||| | |||||||||    
T  4944539 ccagaaaaagtacaaaatagaaacaaagtcgggatcgagacgaccttt 4944586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 464
Target Start/End: Complemental strand, 27438070 - 27438003
Alignment:
Q  397 acaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||||||||||||| |   ||||||||| |||  | |||||||||| |||||||||||||||||||    
T  27438070 acaaggaactcaaagtcgagcgagagtacaaggtttaagtgttcaacgggtttattaatgcatgattt 27438003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 27972934 - 27972992
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||  ||||||||||||||||| || ||||||||| ||| ||||||    
T  27972934 ccagaaaaagcacaaaaataaaacaaagtcgggatc-aagcgaccttttcattaatgatg 27972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 16269437 - 16269493
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||| |||| ||| |||||||||||||||| |||| |||||||| ||||||    
T  16269437 agaaaaagcacgaaatgaaa-caaagtcgggatcaaagcgacttttttattaatgatg 16269493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 153; Significance: 9e-81; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 269 - 523
Target Start/End: Original strand, 22954515 - 22954773
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||   || |||||    
T  22954515 tctttgtaagcgattgccctcttctggactatcttcatgatttttgtttgtagctttgacggctatgatgccccagtatgcgagagatcatgtcgggagt 22954614  T
Q  369 ctcttcattcat---ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt- 464  Q
    |||||||||  |   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  22954615 ctcttcatttttgtcttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgatttg 22954714  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    ||| |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  22954715 attattgattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 22954773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 269 - 513
Target Start/End: Original strand, 12391063 - 12391310
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttg-tagctttgacggctatgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||  ||| |||    
T  12391063 tctttgtaagtgagtgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgag 12391161  T
Q  368 tctcttcattcatttct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12391162 tctcttcattcatgtctctttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 12391261  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttg 513  Q
    |||||||| |||||| ||||||  ||||||||||||||||||| |||||    
T  12391262 attgttgattttgacaagtaaacaaaagttatgattatgcagatatttg 12391310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 269 - 523
Target Start/End: Original strand, 7257796 - 7258053
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttg-tagctttgacggctatgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||  ||| |||    
T  7257796 tctttgtaagtgagtgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgag 7257894  T
Q  368 tctcttcattcatttct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7257895 tctcttcattcatgtctctttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 7257994  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    |||||||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  7257995 attgttgattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 7258053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 269 - 513
Target Start/End: Complemental strand, 1802555 - 1802308
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttg-tagctttgacggctatgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||| || |||||||||||||| ||| ||| ||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||  ||| |||    
T  1802555 tctttgtaagtgagtgccatcttctggattatcttcctgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgag 1802457  T
Q  368 tctcttcattcatttct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1802456 tctcttcattcatgtctctttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 1802357  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttg 513  Q
    |||||||| |||||| ||||||  ||||||||||||||||||| |||||    
T  1802356 attgttgattttgacaagtaaacaaaagttatgattatgcagatatttg 1802308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 283 - 507
Target Start/End: Complemental strand, 7791242 - 7791015
Alignment:
Q  283 tgccatcttctggactattttcatgatttttgtttg-tagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatt 381  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||  ||| ||||||||||||||||     
T  7791242 tgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgagtctcttcattcatg 7791144  T
Q  382 tct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgatttattgttgactttga 478  Q
    |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  7791143 tctctttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgatttattgttgattttga 7791044  T
Q  479 cgagtaaatgaaagttatgattatgcaga 507  Q
    | ||||| |  ||||||||||||||||||    
T  7791043 caagtaagtataagttatgattatgcaga 7791015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 302 - 523
Target Start/End: Complemental strand, 21692203 - 21691978
Alignment:
Q  302 ttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttca--ttcat-ttcttcagcttcggatac 398  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| |||||||  ||| | ||||||||||||||||||    
T  21692203 ttcatgatttttgtttgtagctttgacggctatgatgccccagcatgtgagagatctcatcgggagcctcttcactttcctcttcttcagcttcggatac 21692104  T
Q  399 aaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatg 497  Q
    ||||||||||||||||| ||||||||||||||   ||||||||| | ||||||||||||||||||| ||| |||| |||||| ||||| |  ||||||||    
T  21692103 aaggaactcaaagttggtagagagtacatggttgttgtgttcaaagggtttattaatgcatgatttgattattgattttgacaagtaagtacaagttatg 21692004  T
Q  498 attatgcagacatttgacaataatta 523  Q
    |||||||||| |||||| ||| ||||    
T  21692003 attatgcagatatttgagaatgatta 21691978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 308 - 525
Target Start/End: Complemental strand, 37582020 - 37581799
Alignment:
Q  308 atttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcatt---catttcttcagcttcggatacaaggaa 404  Q
    |||||||||||||| || |||||||| ||||||||||||||  ||||||||||  ||||||||| |||||   |  ||||||| ||||||| | | ||||    
T  37582020 atttttgtttgtagattcgacggctaagatgccccagtaagcaagagatctcactaggagtctcctcattttcctcttcttcatcttcggacatagggaa 37581921  T
Q  405 ctcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatg 503  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  37581920 ctcaaagttggaagagagtacatggttattgtgttcaacgagtttattaatgcatgatttgattattgattttgacgagtaaatgaaagttatgattatg 37581821  T
Q  504 cagacatttgacaataattatt 525  Q
    |||| |||||| ||| ||||||    
T  37581820 cagatatttgaaaatgattatt 37581799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 310 - 525
Target Start/End: Original strand, 20096522 - 20096738
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatttcttcagcttcggatacaaggaactcaa 409  Q
    ||||||| | |||||||||||||| ||||||| |||   |||||||||||||| |||| ||||||| |  | ||||| ||||||||||||||||||||||    
T  20096522 ttttgttcgcagctttgacggctaagatgccctagtggatgagagatctcatcgggagcctcttcacttttctcttctgcttcggatacaaggaactcaa 20096621  T
Q  410 agttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgcagac 508  Q
    ||||||||||||||||||||| | ||||||||||  |||||| |||||||||||| ||| |||| |||||| ||||| |  ||||||||||||||||||     
T  20096622 agttggaagagagtacatggttattgtgttcaacaggtttatcaatgcatgatttgattattgattttgacaagtaagtacaagttatgattatgcagat 20096721  T
Q  509 atttgacaataattatt 525  Q
    |||||| ||| ||||||    
T  20096722 atttgaaaatgattatt 20096738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 309 - 526
Target Start/End: Complemental strand, 25529828 - 25529607
Alignment:
Q  309 tttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcatt---catttcttcagcttcggatacaaggaac 405  Q
    |||||||| | |||||||||||||| |||||||||| | ||||||||||||||| |||| || ||||||   |  |||||||||||||||||||||| |     
T  25529828 tttttgttcgcagctttgacggctaagatgccccagcatgtgagagatctcatcgggagcctattcattttcctcttcttcagcttcggatacaagggat 25529729  T
Q  406 tcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgc 504  Q
    ||||||||   | |||||||||||| | ||||||||||| ||||||||||||||||||| ||| |||| |||||| ||||| |  ||| | ||||||| |    
T  25529728 tcaaagttcataaagagtacatggttattgtgttcaacgggtttattaatgcatgatttgattattgattttgacaagtaagtacaagctttgattatcc 25529629  T
Q  505 agacatttgacaataattatta 526  Q
    ||| || ||| ||| |||||||    
T  25529628 agatatatgagaatgattatta 25529607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 310 - 523
Target Start/End: Complemental strand, 29897887 - 29897670
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcat---ttcttcagcttcggatacaaggaact 406  Q
    ||||||||| |||||||||||||| |||||||||||  | |||||||||  |  |||||||||||||||     ||||||| ||||||  | |  |||||    
T  29897887 ttttgtttgcagctttgacggctaagatgccccagtgggcgagagatcttgtttggagtctcttcattctcctcttcttcatcttcggtcatagagaact 29897788  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgca 505  Q
    |||| |||| |||||||| ||||| | | ||||||||  ||||||||||||||||||| ||| |||| |||||| ||||| |  ||| ||||||||||||    
T  29897787 caaatttgggagagagtagatggttattatgttcaacaggtttattaatgcatgatttgattattgattttgacaagtaagtacaagctatgattatgca 29897688  T
Q  506 gacatttgacaataatta 523  Q
    || |||||| ||| ||||    
T  29897687 gatatttgagaatgatta 29897670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 310 - 507
Target Start/End: Complemental strand, 36451460 - 36451259
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatttcttc---agcttcggatacaaggaact 406  Q
    ||||||||| |||||||||||||| |||||| ||||  | |||||||||     |||| ||||||||||   |||||   | ||||||  |||  |||||    
T  36451460 ttttgtttgcagctttgacggctaagatgcctcagtgggcgagagatcttgctgggagcctcttcattctcctcttccttatcttcggtcacagagaact 36451361  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgca 505  Q
    ||||||||| |||||||||||||| | | ||||||||| ||||||||||||||||||| ||| |||| |||||| ||||| |  ||| ||||||||||||    
T  36451360 caaagttgggagagagtacatggttattatgttcaacgggtttattaatgcatgatttgattattgattttgacaagtaagtacaagctatgattatgca 36451261  T
Q  506 ga 507  Q
    ||    
T  36451260 ga 36451259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 11809903 - 11809986
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||| | |||||||||||||||||||||| |  ||||||||||||||  | |||||||||| |||||||||||||||||||    
T  11809903 ttcttcaacctcggatacaaggaactcaaagtcgagagagagtacatggtttaagtgttcaacgggtttattaatgcatgattt 11809986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 12177056 - 12177139
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||| | |||||||||||||||||||||| |  ||||||||||||||  | |||||||||| |||||||||||||||||||    
T  12177056 ttcttcaacctcggatacaaggaactcaaagtcgagagagagtacatggtttaagtgttcaacgggtttattaatgcatgattt 12177139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 25529578 - 25529520
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  25529578 ccagaaaaagcacaaaataaaa-caaagtcgggatcaaaacgacctttttattaatgatg 25529520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 26085819 - 26085902
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||| | |||||||||||||||||||||| |  ||||||||||||||  | |||||||||| |||||||||||||||||||    
T  26085819 ttcttcaacctcggatacaaggaactcaaagtcgagagagagtacatggtttaagtgttcaacgggtttattaatgcatgattt 26085902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 1802261 - 1802204
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  1802261 agaaaaagcacaaaatgaaaataaagtcgggatcaaaacgacctttttattaatgatg 1802204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 609
Target Start/End: Original strand, 12391355 - 12391402
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttttt 609  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  12391355 agaaaaagcacaaaataaaagcaaagtcgggatcaaaacgaccttttt 12391402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 7258092 - 7258150
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatc-aaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  7258092 agaaaaagcacaaaataaaagcaaagtcgggatcaaaaacgacctttttattaatgatg 7258150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 21691939 - 21691882
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| ||||||||| | |||||||||||||||||||||||||||||||||| ||||||    
T  21691939 agaagaagcacaaagtgaaaacaaagtcgggatcaaaacgacctttttattaatgatg 21691882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 27230094 - 27230177
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||| | |||||||||||||||||||||| |  |||||||||| |||  | |||| ||||| |||||||||||||||||||    
T  27230094 ttcttcaacctcggatacaaggaactcaaagtcgagagagagtacaaggtttaagtgtccaacgggtttattaatgcatgattt 27230177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 561 - 619
Target Start/End: Original strand, 20096779 - 20096836
Alignment:
Q  561 cagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||| || ||||||    
T  20096779 cagaaaaagcacaaaataaaat-aaagtcgggatcaaaacgacctttttgttaatgatg 20096836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 578 - 619
Target Start/End: Complemental strand, 29897601 - 29897560
Alignment:
Q  578 aaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  29897601 aaaaacaaagtcgggatcaaaacgacctttttattaatgatg 29897560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 564 - 624
Target Start/End: Original strand, 22954816 - 22954875
Alignment:
Q  564 aaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatgtccat 624  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||| |||||| ||||    
T  22954816 aaaaagcacaaaataaaatcaa-gtcaggatcaaaacgacctttttattaatgatgaccat 22954875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 562 - 617
Target Start/End: Complemental strand, 7790957 - 7790902
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatga 617  Q
    |||| ||||||||| | ||||||||| |||||||||||||||||||||| ||||||    
T  7790957 agaagaagcacaaagtgaaaacaaaggcgggatcaaaacgacctttttaatgatga 7790902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Original strand, 11810074 - 11810120
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  11810074 ccagaaaaagcacaaaataaaa-caaagtcgggatcaagacgaccttt 11810120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Original strand, 12177228 - 12177274
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  12177228 ccagaaaaagcacaaaataaaa-caaagtcgggatcaagacgaccttt 12177274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 21864078 - 21864137
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||||||||||||||| | |||| |||| |||| ||| ||||||    
T  21864078 ccagaaaaagcacaaaataaaaacaaagtcggaaacaaagcgactttttaattaatgatg 21864137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 23640228 - 23640145
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| ||  |||||||||||||||||| |   ||||||||| |||  | |||||||||| |||||||||||||||||||    
T  23640228 ttcttcagcctcatatacaaggaactcaaagtcgagcgagagtacagggtttaagtgttcaacgggtttattaatgcatgattt 23640145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 23832658 - 23832741
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| ||  |||||||||||||||||| |   ||||||||| |||  | |||||||||| |||||||||||||||||||    
T  23832658 ttcttcagcctcatatacaaggaactcaaagtcgagcgagagtacagggtttaagtgttcaacgggtttattaatgcatgattt 23832741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 24961261 - 24961344
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| || |||| |||||||||||||| |  |||||||||  |||  | |||||||||| |||||||||||||||||||    
T  24961261 ttcttcagcctcagatataaggaactcaaagtcgagagagagtaccaggtttaagtgttcaacgggtttattaatgcatgattt 24961344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Original strand, 24961431 - 24961478
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  24961431 ccagaaaaagcaaaaaataaaaacaaggtcgggatcaagacgaccttt 24961478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Original strand, 26085998 - 26086044
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  26085998 ccagaaaaagcacaaaataaaa-caaagtcgggatcaagacgaccttt 26086044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 28847744 - 28847697
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||    
T  28847744 ccagaaaaagcacaaaataaaaacgaggtcgggatcaagacgaccttt 28847697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 561 - 612
Target Start/End: Complemental strand, 36451206 - 36451156
Alignment:
Q  561 cagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttatt 612  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  36451206 cagaaaaagcacaaaataaaat-aaagtcgggattaaaacgacctttttatt 36451156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 464
Target Start/End: Complemental strand, 20381095 - 20381015
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| ||||||||||||||||||| || |  || ||| | ||| | || |||||||||| |||||||||||||||||||    
T  20381095 ttcagcctcggatacaaggaactcaaggtcgagagggagcatatgattaaagtgttcaacgggtttattaatgcatgattt 20381015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 464
Target Start/End: Original strand, 33841403 - 33841483
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| ||||||||||||||||||| || |  || || || ||| | || |||||||||| |||||||||||||||||||    
T  33841403 ttcagcctcggatacaaggaactcaaggtcgagagggaatatatgattaaagtgttcaacgcgtttattaatgcatgattt 33841483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 461
Target Start/End: Complemental strand, 28847903 - 28847836
Alignment:
Q  394 gatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatga 461  Q
    ||||||||||||||||||| |  | |||||||| |||  | |||||||||| ||||||||||||||||    
T  28847903 gatacaaggaactcaaagtcgagaaagagtacaaggtttaagtgttcaacgggtttattaatgcatga 28847836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 33841578 - 33841635
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||||| ||| ||||||    
T  33841578 ccagaaaaagcacaaaat-aaaacaaagtcgggatc-aagcgaccttttcattaatgatg 33841635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 597
Target Start/End: Complemental strand, 20380917 - 20380881
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaa 597  Q
    |||||||||||||||||| |||||||||||||||||||    
T  20380917 ccagaaaaagcacaaaat-aaaacaaagtcgggatcaa 20380881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 597
Target Start/End: Original strand, 27230282 - 27230318
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaa 597  Q
    |||||||||||||||||| |||||||||||||||||||    
T  27230282 ccagaaaaagcacaaaat-aaaacaaagtcgggatcaa 27230318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 1e-79; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 269 - 513
Target Start/End: Original strand, 15532961 - 15533208
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttg-tagctttgacggctatgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||  ||| |||    
T  15532961 tctttgtaagtgagtgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggtgagagatcttgtcatgag 15533059  T
Q  368 tctcttcattcatttct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15533060 tctcttcattcatgtctctttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 15533159  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttg 513  Q
    |||||||| |||||| ||||||  ||||||||||||||||||| |||||    
T  15533160 attgttgattttgacaagtaaacaaaagttatgattatgcagatatttg 15533208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 269 - 513
Target Start/End: Complemental strand, 8620876 - 8620629
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttg-tagctttgacggctatgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||  ||| |||    
T  8620876 tctttgtaagtgagtgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgag 8620778  T
Q  368 tctcttcattcatttct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8620777 tctcttcattcatgtctctttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 8620678  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttg 513  Q
    |||||||| |||||| ||||||  ||||||||||||||||||| |||||    
T  8620677 attgttgattttgacaagtaaacaaaagttatgattatgcagatatttg 8620629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 269 - 513
Target Start/End: Original strand, 46396333 - 46396580
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttg-tagctttgacggctatgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||  ||| |||    
T  46396333 tctttgtaagtgagtgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgag 46396431  T
Q  368 tctcttcattcatttct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  46396432 tctcttcattcatgtctctttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 46396531  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttg 513  Q
    |||||||| |||||| ||||||  ||||||||||||||||||| |||||    
T  46396532 attgttgattttgacaagtaaacaaaagttatgattatgcagatatttg 46396580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 283 - 513
Target Start/End: Complemental strand, 6198824 - 6198591
Alignment:
Q  283 tgccatcttctggactattttcatgatttttgttt-gtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcat- 380  Q
    |||||||||||||| ||| |||||||||||||||| |||||||||| ||||| |||||||||||| | |||||||||  ||| ||||||||||||||||     
T  6198824 tgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgagtctcttcattcatg 6198726  T
Q  381 --ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgatttattgttgactttga 478  Q
      |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  6198725 cctctttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgatttattgttgattttga 6198626  T
Q  479 cgagtaaatgaaagttatgattatgcagacatttg 513  Q
    | ||||||  ||||||||||||||||||| |||||    
T  6198625 caagtaaacaaaagttatgattatgcagatatttg 6198591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 269 - 507
Target Start/End: Complemental strand, 15624112 - 15623870
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||     
T  15624112 tctttgtaagcgattgccatcttctggactatcttcatgatttttgtttgtagctttgacggctatgatgccccagcatgtgagagatctcatcgggagc 15624013  T
Q  369 ctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt- 464  Q
    |||||||  ||| | ||||||||||||||||||||||||||||||||||  ||||||||||||||   ||||||||||| |||||||||||||||||||     
T  15624012 ctcttcactttcctcttcttcagcttcggatacaaggaactcaaagttgatagagagtacatggttgttgtgttcaacgggtttattaatgcatgatttg 15623913  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcaga 507  Q
    ||| |||| |||||| ||||| |  ||||||||||||||||||    
T  15623912 attattgattttgacaagtaagtacaagttatgattatgcaga 15623870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 275 - 523
Target Start/End: Complemental strand, 14421998 - 14421746
Alignment:
Q  275 taagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttc 374  Q
    ||||||||| || ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| | || |||||||||| |||| ||||||    
T  14421998 taagcgattaccctcttctggactatcttcatgatttttgtttgtagctttgatggctatgatgccccagtatgcgatagatctcatcgggagcctcttc 14421899  T
Q  375 a--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgatttattgttg 471  Q
    |  ||| | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  14421898 actttcttcttcttcagcttcagatacaaggaactcaaagttggaagagagtgcatggtaaatgtgttcaacgggtttattaatgcatgatttattgttg 14421799  T
Q  472 a-ctttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    |  |||||| ||||  |  |||||||||||||||||| |||||| ||| ||||    
T  14421798 atttttgacaagtatgtacaagttatgattatgcagatatttgagaatgatta 14421746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 275 - 523
Target Start/End: Original strand, 12475932 - 12476182
Alignment:
Q  275 taagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatc-aggagtctctt 373  Q
    ||||||||||||| ||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||| | ||||||||   ||  ||||||||||    
T  12475932 taagcgattgccaccttctagactatcttcatgatttttgtttgtagctttgatggctatgatgccccagtatgcgagagatcatgtcggggagtctctt 12476031  T
Q  374 cattcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgat-ttattgttga 472  Q
    ||||| ||||||||||||| ||||||| | |||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||| | ||| ||||    
T  12476032 cattcttttcttcagcttcagatacaaaggactcaaagttagaagagagtacatggtaaatgtgttcaacgggtttatcaatgcatgatatgattattga 12476131  T
Q  473 ctttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
     |||||| ||||| || |||||||||||||||||| |||||| ||| ||||    
T  12476132 ttttgacaagtaagtgcaagttatgattatgcagatatttgagaatgatta 12476182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 8808961 - 8808706
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||||||||    ||||||||||||| |||||||||||||| | ||||||||||||| ||||    
T  8808961 tctttgtaagcgattgccatcctctgaactatcttcatgatttttgt----agctttgacggcttatgatgccccagtatgcgagagatctcatcgggag 8808866  T
Q  368 tctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     |||||||  ||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| ||||||| |||||||||||||||||||    
T  8808865 cctcttcactttcctcttcttcagcttcggatacaaggaactcaaagttggtagagagtacatggttattgttttcaacgggtttattaatgcatgattt 8808766  T
Q  465 -attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
     ||| |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  8808765 gattattgattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 8808706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 21612396 - 21612135
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||||||   |||||||||||||||| |||||||||||||| | ||||||||||||| ||||    
T  21612396 tctttgtaagcgattgccatcctctgaactatcttcatgattttt---tgtagctttgacggcttatgatgccccagtatgcgagagatctcatcgggag 21612300  T
Q  368 tctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagttt-----attaatgcat 459  Q
     |||||||  ||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| ||||     ||||||||||    
T  21612299 cctcttcactttcctcttcttcagcttcggatacaaggaactcaaagttggtagagagtacatggttattgtgttcaacgggtttattaaattaatgcat 21612200  T
Q  460 gattt-attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    ||||| ||| |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  21612199 gatttgattattgattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 21612135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 308 - 523
Target Start/End: Complemental strand, 3680914 - 3680695
Alignment:
Q  308 atttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcatt---catttcttcagcttcggatacaaggaa 404  Q
    |||||||||||||| || |||||||| ||||||||||||||  |||||||||||| |||||||| |||||   |  ||||||| ||||||| | |  |||    
T  3680914 atttttgtttgtagattcgacggctaagatgccccagtaagcaagagatctcatcgggagtctcctcattttcctcttcttcatcttcggacatagagaa 3680815  T
Q  405 ctcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatg 503  Q
    ||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||||||| ||| |||| ||||||  ||||||||||||||||||||||    
T  3680814 ctcaaagttggaagagagtgcatggttactgtgttcaacgggtttattaatgcatgatttgattattgattttgacatgtaaatgaaagttatgattatg 3680715  T
Q  504 cagacatttgacaataatta 523  Q
    |||| |||||| ||| ||||    
T  3680714 cagatatttgaaaatgatta 3680695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 308 - 523
Target Start/End: Complemental strand, 30017470 - 30017251
Alignment:
Q  308 atttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcatt---catttcttcagcttcggatacaaggaa 404  Q
    |||||||||||||| || |||||||| ||||||||||||||  |||||||||||| |||||||| |||||   |  ||||||| |||| || | |  |||    
T  30017470 atttttgtttgtagattcgacggctaagatgccccagtaagcaagagatctcatcgggagtctcctcattttcctcttcttcatcttcagacatagagaa 30017371  T
Q  405 ctcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatg 503  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| ||| |||| ||||||  ||||||||||||||||||||||    
T  30017370 ctcaaagttggaagagagtacatggttactgtgttcaacgggtttattaatgcatgatttgattattgattttgacatgtaaatgaaagttatgattatg 30017271  T
Q  504 cagacatttgacaataatta 523  Q
    |||| |||||| ||| ||||    
T  30017270 cagatatttgaaaatgatta 30017251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 310 - 523
Target Start/End: Complemental strand, 33569063 - 33568846
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcatt---catttcttcagcttcggatacaaggaact 406  Q
    ||||||||| |||||||||||||| |||||||||||  | |||||||||     ||||||||||||||   |  |||||||||||||| |||||||||||    
T  33569063 ttttgtttgcagctttgacggctaagatgccccagtgggcgagagatcttgctgggagtctcttcattctcctcttcttcagcttcgggtacaaggaact 33568964  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgca 505  Q
    ||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||| ||| |||| |||||| ||||| | |||||||||||||||||    
T  33568963 caaagttggtagagagtacatggttattgtgttcaacgggtttattaatgcatgatttgattattgaatttgacaagtaagtaaaagttatgattatgca 33568864  T
Q  506 gacatttgacaataatta 523  Q
    || |||||| ||| ||||    
T  33568863 gatatttgagaatgatta 33568846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 323 - 523
Target Start/End: Complemental strand, 3408203 - 3407999
Alignment:
Q  323 tttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcatt---catttcttcagcttcggatacaaggaactcaaagttggaaga 419  Q
    |||||||||||||||||||||| | ||||||||||||||| |||| |||||||||   |  |||||||||||||||||||||||| ||||||||   |||    
T  3408203 tttgacggctatgatgccccagcatgtgagagatctcatcgggagcctcttcattttcctcttcttcagcttcggatacaaggaattcaaagttcataga 3408104  T
Q  420 gagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaat 518  Q
    ||||||||||| | ||||||||||| ||||||||||||||||||| ||| |||| |||||| ||||| |  |||||||||||||||||| |||||| |||    
T  3408103 gagtacatggttattgtgttcaacgggtttattaatgcatgatttgattattgattttgacaagtaagtataagttatgattatgcagatatttgagaat 3408004  T
Q  519 aatta 523  Q
     ||||    
T  3408003 gatta 3407999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 309 - 523
Target Start/End: Complemental strand, 8609405 - 8609187
Alignment:
Q  309 tttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcatt---catttcttcagcttcggatacaaggaac 405  Q
    |||||||| | || ||||||||||| |||||||||| | ||||||||||||||| |||| |||||||||   |  ||||||||||||||||||||||||     
T  8609405 tttttgttcgcagttttgacggctaagatgccccagcatgtgagagatctcatcgggagcctcttcattttcctcttcttcagcttcggatacaaggaat 8609306  T
Q  406 tcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgc 504  Q
    ||||||||   |||||||||||||| | ||||||||||| |||||||||| |||||||| ||| |||| |||||| |||||||  |||||||||||||||    
T  8609305 tcaaagttcatagagagtacatggttattgtgttcaacgggtttattaatacatgatttgattattgattttgacaagtaaatataagttatgattatgc 8609206  T
Q  505 agacatttgacaataatta 523  Q
    ||| |||||| ||| ||||    
T  8609205 agatatttgagaatgatta 8609187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 310 - 526
Target Start/End: Original strand, 30092732 - 30092948
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatttcttcagcttcggatacaaggaactcaa 409  Q
    ||||||||| |||||||||| ||| |||||||||||| ||||||  |||  |  ||||||| ||| |||  |||||| ||||||||||||||||||||||    
T  30092732 ttttgtttgcagctttgacgactaagatgccccagtatgtgagat-tcttgttgggagtctattccttctcttcttcggcttcggatacaaggaactcaa 30092830  T
Q  410 agttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattta-ttgttgactttgacgagtaaatgaaagttatgattatgcagac 508  Q
    |||||||||||| | |||||| ||||| ||||||| |||||||||||||||||||| || |||| |||||| ||||| |   ||||||| |||||||||     
T  30092831 agttggaagagatttcatggttaatgtattcaacgggtttattaatgcatgatttatttattgattttgacaagtaagtacgagttatggttatgcagat 30092930  T
Q  509 atttgacaataattatta 526  Q
    |||||| ||| |||||||    
T  30092931 atttgaaaatgattatta 30092948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 310 - 526
Target Start/End: Complemental strand, 11184569 - 11184349
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatttcttc---agcttcggatacaaggaact 406  Q
    ||||||||| |||||||||||||| |||||||||||  | |||||||||    ||||||||||||||||   |||||   | ||||||  |||  |||||    
T  11184569 ttttgtttgcagctttgacggctaagatgccccagtgggcgagagatcttgctaggagtctcttcattctcctcttctccatcttcggtcacagagaact 11184470  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgca 505  Q
    ||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||| ||| |||| |||||| ||||| |  ||| ||||||||||||    
T  11184469 caaagttgggagagagtacatggttattgtgttcaacgggtttattaatgcatgatttgattattgattttgacaagtaagtacaagctatgattatgca 11184370  T
Q  506 gacatttgacaataattatta 526  Q
    || || ||| ||| |||||||    
T  11184369 gatatatgagaatgattatta 11184349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 402 - 507
Target Start/End: Original strand, 13108761 - 13108867
Alignment:
Q  402 gaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgatt 500  Q
    |||||||||||||| |||||||||||||| | | ||||||||| ||||||||||||||||||| ||| |||| |||||| ||||| |  ||| |||||||    
T  13108761 gaactcaaagttgggagagagtacatggttattatgttcaacgggtttattaatgcatgatttgattattgattttgacaagtaagtacaagctatgatt 13108860  T
Q  501 atgcaga 507  Q
    |||||||    
T  13108861 atgcaga 13108867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 402 - 526
Target Start/End: Complemental strand, 71251 - 71126
Alignment:
Q  402 gaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgatt 500  Q
    |||||||||||||| ||||||||||| || | | ||||||||| ||||||||||||||||||| ||| |||| |||||| ||||| |  ||| |||||||    
T  71251 gaactcaaagttgggagagagtacatagttattatgttcaacgggtttattaatgcatgatttgattattgattttgacaagtaagtacaagctatgatt 71152  T
Q  501 atgcagacatttgacaataattatta 526  Q
    ||||||| || ||| ||| |||||||    
T  71151 atgcagatatatgagaatgattatta 71126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 11184316 - 11184259
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  11184316 agaaaaagcacaaactaaaaacaaagtcgggatcaaaacgacctttttattaatgatg 11184259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 8609143 - 8609083
Alignment:
Q  560 ccagaaaaagcacaaaataaaaa-caaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  8609143 ccagaaaaagcacaaaataaaaagcaaagtcgggatcaaaacgacctttttattaatgatg 8609083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 562 - 618
Target Start/End: Original strand, 12476225 - 12476281
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgat 618  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  12476225 agaaaaagcacagaataaaaacaaagtcgggatcaaaacgacctttttattaatgat 12476281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 612
Target Start/End: Complemental strand, 14421704 - 14421654
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttatt 612  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14421704 agaaaaagcacaaaatgaaaacaaagtcgggatcaaaacgacctttttatt 14421654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 46396627 - 46396684
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  46396627 agaaaaagcacaaaatgaaaataaagtcgggatcaaaacgacctttttattaatgatg 46396684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 560 - 608
Target Start/End: Original strand, 3241636 - 3241684
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttt 608  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3241636 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacttttt 3241684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 14394916 - 14395050
Alignment:
Q  311 tttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcat---ttcttcagcttcggatacaaggaactc 407  Q
    |||||||| |||||||| | ||| ||||||| ||||| ||||||||||  || ||| ||||||||||| |   ||||||| ||||||| | | |||||||    
T  14394916 tttgtttgcagctttgatgtctaagatgccctagtaattgagagatcttgtcgggaatctcttcattcttctcttcttcatcttcggacaaagggaactc 14395015  T
Q  408 aaagttggaagagagtacatggtaaatgtgttcaa 442  Q
    ||||| || |||||||| ||||| |||||||||||    
T  14395016 aaagtcgggagagagtatatggttaatgtgttcaa 14395050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 609
Target Start/End: Complemental strand, 8808667 - 8808620
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttttt 609  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  8808667 agaaaaagcacaaaataaaagcaaagtcgggatcaaaacgaccttttt 8808620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 609
Target Start/End: Complemental strand, 21612096 - 21612049
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttttt 609  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  21612096 agaaaaagcacaaaataaaagcaaagtcgggatcaaaacgaccttttt 21612049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 561 - 619
Target Start/End: Original strand, 30092981 - 30093038
Alignment:
Q  561 cagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||    
T  30092981 cagaaaaagcacaaaataaaat-aaagtcgggatcaaaacgacctttttattaatgatg 30093038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 15533255 - 15533312
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||    
T  15533255 agaaaaagcacaaaatgaaagtaaagtcgggatcaaaacgacctttttattaatgatg 15533312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 391 - 464
Target Start/End: Complemental strand, 17929874 - 17929801
Alignment:
Q  391 tcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| ||||||||||||||| |||||||||| ||| || || ||||||| ||||||||| |||||||||    
T  17929874 tcggatacacggaactcaaagttgggagagagtacagggttaaagtattcaacgggtttattaacgcatgattt 17929801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 9551290 - 9551371
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| |||||||||||||||||||||| |  |||||||||| |||  | |||||||||| |||| ||||||||||||||    
T  9551290 ttcttcagcctcggatacaaggaactcaaagtcg--agagagtacaaggtttaagtgttcaacgggtttgttaatgcatgattt 9551371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 381 - 485
Target Start/End: Original strand, 14884394 - 14884498
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgatttattgttgactttgacg 480  Q
    ||||||| ||||||  |||  |||||||||||||| | |||||||||||| | ||||||||| | |||||||||||||||||||  | |||| ||||||     
T  14884394 ttcttcatcttcggtcacagagaactcaaagttgggaaagagtacatggttattgtgttcaatgggtttattaatgcatgatttgatattgattttgaca 14884493  T
Q  481 agtaa 485  Q
    |||||    
T  14884494 agtaa 14884498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 561 - 612
Target Start/End: Original strand, 13108920 - 13108970
Alignment:
Q  561 cagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttatt 612  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  13108920 cagaaaaagcacaaaataaaat-aaagtcgggatcaaaacgacctttttatt 13108970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 402 - 526
Target Start/End: Original strand, 23285100 - 23285226
Alignment:
Q  402 gaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatga-t 499  Q
    |||||||||||||| ||||||||||| || | | ||||||||| ||||||||||| ||||||| ||| |||| |||||| ||||| |  ||| ||||| |    
T  23285100 gaactcaaagttgggagagagtacatagttattatgttcaacgggtttattaatggatgatttgattattgattttgacaagtaagtacaagctatgatt 23285199  T
Q  500 tatgcagacatttgacaataattatta 526  Q
    |||||||| || ||| ||| |||||||    
T  23285200 tatgcagatatatgagaatgattatta 23285226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 561 - 619
Target Start/End: Original strand, 23285256 - 23285313
Alignment:
Q  561 cagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||||| ||||||    
T  23285256 cagaaaaagcacaaaataaaat-aaagtcgggatcaaaacaacctttttattaatgatg 23285313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 6198544 - 6198487
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||| |||  |||| |||||||||||||||||||||||| ||||||    
T  6198544 agaaaaagcacaaaatgaaagtaaaggcgggatcaaaacgacctttttattaatgatg 6198487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 8620582 - 8620525
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||| |||  ||||||||||| ||||||||||||||||| ||||||    
T  8620582 agaaaaagcacaaaatgaaagtaaagtcgggattaaaacgacctttttattaatgatg 8620525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 15623811 - 15623754
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| ||||||||| | ||||||||| |||||||||||||||||||||||| ||||||    
T  15623811 agaagaagcacaaagtgaaaacaaaggcgggatcaaaacgacctttttattaatgatg 15623754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 526
Target Start/End: Complemental strand, 12558132 - 12558024
Alignment:
Q  419 agagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaa 517  Q
    ||||||||| || | | ||||||||| ||||||||||||||||||| ||| |||| |||||| ||||| |  ||| |||||||||||||| || ||| ||    
T  12558132 agagtacatagttattatgttcaacgggtttattaatgcatgatttgattattgattttgacaagtaagtacaagctatgattatgcagatatatgagaa 12558033  T
Q  518 taattatta 526  Q
    | |||||||    
T  12558032 tgattatta 12558024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 401 - 464
Target Start/End: Original strand, 3241491 - 3241554
Alignment:
Q  401 ggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||||||| ||| |||||| ||| || ||| |||||| |||||||||||||||||||    
T  3241491 ggaactcaaagttgggagatagtacagggttaaagtgatcaacgggtttattaatgcatgattt 3241554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Original strand, 8201790 - 8201837
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||    
T  8201790 ccagaaaaagcacaaaataaaaacaaggtcgggatcgagacgaccttt 8201837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 41002228 - 41002181
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  41002228 ccagaaaaagcaaaaaataaaaacaaggtcgggatcaagacgaccttt 41002181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 41011010 - 41010963
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  41011010 ccagaaaaagcaaaaaataaaaacaaggtcgggatcaagacgaccttt 41010963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 619
Target Start/End: Complemental strand, 71072 - 71032
Alignment:
Q  579 aaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  71072 aaaataaagtcgggatcaaaacgacctttttattaatgatg 71032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 3680644 - 3680584
Alignment:
Q  560 ccagaaaaagcacaaaataaaaa-caaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||| |||||||||| ||||||||||||| || |||| |||||||| ||||||    
T  3680644 ccagaaaaagcaaaaaataaaaagcaaagtcgggatcgaagcgacttttttattaatgatg 3680584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 8201633 - 8201714
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| |||||||||||||||||||||| |  |||||||||| |||  | | |||||||  |||||||||||||| ||||    
T  8201633 ttcttcagcctcggatacaaggaactcaaagtcg--agagagtacaaggtttaagcgttcaacaggtttattaatgcattattt 8201714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 464
Target Start/End: Original strand, 14663341 - 14663425
Alignment:
Q  380 tttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||||| | ||||| ||  |||||| ||||| |  |||||||||| ||| || |||||||||| |||||||||||||||||||    
T  14663341 tttcttcaacctcggacacggggaacttaaagtcgagagagagtacagggttaaagtgttcaacgggtttattaatgcatgattt 14663425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 464
Target Start/End: Original strand, 15681126 - 15681206
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| ||||||||||| ||||||| || |  || ||||| ||| | || |||||||||| |||||||||||||||||||    
T  15681126 ttcagcctcggatacaagaaactcaaggtcgagagggagtatatgattaaagtgttcaacgggtttattaatgcatgattt 15681206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 30017213 - 30017153
Alignment:
Q  560 ccagaaaaagcacaaaataaaaa-caaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||| |||||||||| ||||||||||||| || |||| |||||||| ||||||    
T  30017213 ccagaaaaagcaaaaaataaaaagcaaagtcgggatcgaagcgacttttttattaatgatg 30017153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 10718750 - 10718833
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| ||  |||||||||||||||||| |   ||||||||| |||  | |||||||| | |||||||||||||||||||    
T  10718750 ttcttcagcctcatatacaaggaactcaaagtcgagcgagagtacagggtttaagtgttcaatgggtttattaatgcatgattt 10718833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 15681303 - 15681360
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||||| ||| ||||||    
T  15681303 ccagaaaaagcacaaaat-aaaacaaagtcgggatc-aagcgaccttttcattaatgatg 15681360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 561 - 619
Target Start/End: Original strand, 14395164 - 14395221
Alignment:
Q  561 cagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||||||||||  ||||||| ||||||||||||  |||||||| ||||||    
T  14395164 cagaaaaagcacaaaataaag-caaagtcaggatcaaaacgaattttttattaatgatg 14395221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 561 - 607
Target Start/End: Complemental strand, 27884392 - 27884347
Alignment:
Q  561 cagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    ||||||||||||||| ||||||||||||||||||| | |||||||||    
T  27884392 cagaaaaagcacaaa-taaaaacaaagtcgggatcgagacgaccttt 27884347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 41002386 - 41002316
Alignment:
Q  394 gatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||| |||||||||||||| |  |||||||||  |||  | |||||||||| |||||||||||||||||||    
T  41002386 gatataaggaactcaaagtcgagagagagtaccaggtttaagtgttcaacgggtttattaatgcatgattt 41002316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 41011168 - 41011098
Alignment:
Q  394 gatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||| |||||||||||||| |  |||||||||  |||  | |||||||||| |||||||||||||||||||    
T  41011168 gatataaggaactcaaagtcgagagagagtaccaggtttaagtgttcaacgggtttattaatgcatgattt 41011098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 597
Target Start/End: Complemental strand, 25267416 - 25267380
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaa 597  Q
    |||||||||||||||||| |||||||||||||||||||    
T  25267416 ccagaaaaagcacaaaat-aaaacaaagtcgggatcaa 25267380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 464
Target Start/End: Complemental strand, 25267592 - 25267519
Alignment:
Q  391 tcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||| ||||||||||| || |  || ||||| ||| | || |||||||||| |||||||||||||||||||    
T  25267592 tcggatataaggaactcaaggtcgagagggagtatatgattaaagtgttcaacgggtttattaatgcatgattt 25267519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 619
Target Start/End: Original strand, 14884508 - 14884548
Alignment:
Q  579 aaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| |||||||||||||||||||| |||||||| ||||||    
T  14884508 aaaataaagtcgggatcaaaacgacttttttattaatgatg 14884548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 150; Significance: 5e-79; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 276 - 523
Target Start/End: Original strand, 16457 - 16708
Alignment:
Q  276 aagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttca 375  Q
    ||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  16457 aagcgattgtcatcttctggactatcttcatgatttttatttgtagctttgacggctatgatgccccagtatgcgagagatctcatcgggagtctcttca 16556  T
Q  376 ttcat---ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattta-ttgttg 471  Q
    ||| |   ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| || |||    
T  16557 ttcttgtcttctttagcttcggatacaaggaactcaaagttggaagagagtacaaggtaaatgtgttcaacgggtttattaatgcatgatttatttattg 16656  T
Q  472 actttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    | |||||| ||||| |  |||||||||| ||||||| |||||| ||| ||||    
T  16657 attttgacaagtaagtacaagttatgatcatgcagatatttgagaatgatta 16708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 16746 - 16803
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  16746 agaagaagcaaaaaataaaaacaaagtcgggatcaaaacgacctttttattaatgatg 16803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 148; Significance: 9e-78; HSPs: 2)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 15399 - 15144
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||| ||| |    
T  15399 tctttgtaagcgattgccatcttatggattatcttcatgatttttgtttgtagctttgacggctatgatgccccagcatgcgagagatctcatcgggaat 15300  T
Q  369 ctcttcattcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-att 467  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||| | | ||||||||| ||||||||||||||||||| |||    
T  15299 ctcttcattcttttcttcagcttcggatacaaggagctcaaagttggtagagagtacatggttattatgttcaacgggtttattaatgcatgatttgatt 15200  T
Q  468 gttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
     |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  15199 attgattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 15144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 15103 - 15043
Alignment:
Q  560 ccagaaaaagcacaaaataaaaa-caaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||    
T  15103 ccagaaaaagcacaaaataaaaaacaaagttgggatcaaaacaacctttttattaatgatg 15043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 3e-77; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 269 - 514
Target Start/End: Original strand, 16723678 - 16723927
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||     
T  16723678 tctttctaagcgattgccatcttctggactatcttcatgatttttgtttgtagctttgacggctatgatgccccagcatgtgagagatctcatcgggagc 16723777  T
Q  369 ctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgatt-t 464  Q
    |||||||  ||| | |||||||||||||||||| |||||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||      
T  16723778 ctcttcactttcctcttcttcagcttcggataccaggaactcaaagttggtagagagtacatggttattgtgttcaacgggtttattaatgcatgattcg 16723877  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttga 514  Q
    ||| |||| |||||| ||||| |  |||||||||||||||||||||||||    
T  16723878 attattgattttgacaagtaagtacaagttatgattatgcagacatttga 16723927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 269 - 514
Target Start/End: Complemental strand, 14874563 - 14874315
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||| || ||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||| |||| ||||||||| |  || |||||    
T  14874563 tctttgtaagtgactgccatcttatggactatctccttgatttttgtttgtagctttgacggctatgatgccctagtatgtgagagattttgtcgggagt 14874464  T
Q  369 ctcttcattcat---ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattta 465  Q
    |||||||||| |   |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14874463 ctcttcattcttgtcttcttcagcttcagatgcaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattta 14874364  T
Q  466 ttgttgactttgacgagtaaatgaaagttatgattatgcagacatttga 514  Q
    ||||||| ||||| |||||| |  |||||||||||||||||| ||||||    
T  14874363 ttgttgattttgaagagtaagtacaagttatgattatgcagatatttga 14874315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 269 - 464
Target Start/End: Complemental strand, 16365410 - 16365212
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||     
T  16365410 tctttgtaagcgactgccatcttctggactatcttcatgatttttgtttgtagctttgacggcaatgatgccccagcatgtgagagatctcatcaggagc 16365311  T
Q  369 ctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||||  ||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||||||||    
T  16365310 ctcttcactttcctcttcttcagcttcggatacaaggaactcaaagttggtagagagtacatggttattgtgttcaacgggtttattaatgcatgattt 16365212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 20557620 - 20557365
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||||||||| | ||| ||||||||||||||||| ||| ||||||||||||||| || |     
T  20557620 tctttgtaagcgattgtcatcttctggactatcttcatgatttttgtttgcaacttggacggctatgatgccccggtatgtgagagatctcatcgggtgc 20557521  T
Q  369 ctcttcattcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-att 467  Q
    ||||||| |    ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| |||    
T  20557520 ctcttcactttcctcttctgcttcggatacaaggaactcaaagttggaagagagtacatggttattgtgttcaacgggtttattaatgcatgatttgatt 20557421  T
Q  468 gttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
     |||| |||||| ||||| |  | |||||||||||||||| |||||| ||| ||||    
T  20557420 attgattttgacaagtaagtataggttatgattatgcagatatttgagaatgatta 20557365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 22708590 - 22708334
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||||||   |||||||||||||||| |||||||||||||| | ||||||||||||| ||||    
T  22708590 tctttgtaagcgattgccatcctctgaactatcttcatgattttt---tgtagctttgacggcttatgatgccccagtatgcgagagatctcatcgggag 22708494  T
Q  368 tctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     |||||||  ||| | ||||||||||||||||||||||||||||||||||| |||||||||||||  | ||||||||||| |||||||||||||||||||    
T  22708493 cctcttcactttcctcttcttcagcttcggatacaaggaactcaaagttggtagagagtacatggccattgtgttcaacgggtttattaatgcatgattt 22708394  T
Q  465 -attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
     ||| |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  22708393 gattattgattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 22708334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 275 - 526
Target Start/End: Original strand, 15570620 - 15570870
Alignment:
Q  275 taagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttc 374  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||||| ||||||| |||  || |||||||| ||    
T  15570620 taagcaattgccatcttctggactatcttcatgatttttgtttgtacttttgacggctaagatgccccagtatgtgagag-tcttgtcgggagtctcatc 15570718  T
Q  375 attcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgac 473  Q
     ||| | |||||||||||||||||||||||||||||||||| ||||| | |||||| ||||||||||||| |||||||||| |||||||| ||| ||||     
T  15570719 cttc-tctcttcagcttcggatacaaggaactcaaagttggtagagatttcatggttaatgtgttcaacgtgtttattaattcatgatttgattattgat 15570817  T
Q  474 tttgacgagtaaatgaaagttatgattatgcagacatttgacaataattatta 526  Q
    |||||| ||||| |  || ||||||||||||||| |||||| ||| |||||||    
T  15570818 tttgacaagtaagtacaaattatgattatgcagatatttgaaaatgattatta 15570870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 275 - 526
Target Start/End: Original strand, 15574748 - 15574998
Alignment:
Q  275 taagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttc 374  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||||| ||||||| |||  || |||||||| ||    
T  15574748 taagcaattgccatcttctggactatcttcatgatttttgtttgtacttttgacggctaagatgccccagtatgtgagag-tcttgtcgggagtctcatc 15574846  T
Q  375 attcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgac 473  Q
     ||| | |||||||||||||||||||||||||||||||||| ||||| | |||||| ||||||||||||| |||||||||| |||||||| ||| ||||     
T  15574847 cttc-tctcttcagcttcggatacaaggaactcaaagttggtagagatttcatggttaatgtgttcaacgtgtttattaattcatgatttgattattgat 15574945  T
Q  474 tttgacgagtaaatgaaagttatgattatgcagacatttgacaataattatta 526  Q
    |||||| ||||| |  || ||||||||||||||| |||||| ||| |||||||    
T  15574946 tttgacaagtaagtacaaattatgattatgcagatatttgaaaatgattatta 15574998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 310 - 526
Target Start/End: Original strand, 3385411 - 3385631
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcat---ttcttcagcttcggatacaaggaact 406  Q
    ||||||| | |||||||||||||| |||||||||||| ||||||||||   ||  |||||||||||||| |   ||||||||||||||||||||||||||    
T  3385411 ttttgttcgcagctttgacggctaagatgccccagtatgtgagagatcatgtcgagagtctcttcattcttgtcttcttcagcttcggatacaaggaact 3385510  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgatttattgttga-ctttgacgagtaaatgaaagttatgattatgca 505  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||  |||||| ||||| |  |||||||| |||||||    
T  3385511 caaagttggaagatagtacatggttaatgtgttcaacgggtttattaatgcatgatttattgttgatttttgacaagtaagttcaagttatggttatgca 3385610  T
Q  506 gacatttgacaataattatta 526  Q
    || |||||| ||| |||||||    
T  3385611 gatatttgaaaatgattatta 3385631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 269 - 524
Target Start/End: Original strand, 3831711 - 3831967
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||| |||||||||| |||| ||||| ||||||||||||||    ||||||||||||| |||||||||||||| | ||||||||||||| ||||    
T  3831711 tctttgtaagtgattgccatcctctgaactatcttcatgatttttgt----agctttgacggcttatgatgccccagtatgcgagagatctcatcgggag 3831806  T
Q  368 tctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     |||||||  ||| | |||||  |||||||||||| ||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||||||||    
T  3831807 cctcttcactttcctcttctttggcttcggatacatggaactcaaagttggtagagagtacatggttattgtgttcaacgggtttattaatgcatgattt 3831906  T
Q  465 -attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataattat 524  Q
     ||| |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| |||||    
T  3831907 gattattgattttgacaagtaagtataagttatgattatgcagatatttgagaatgattat 3831967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 269 - 464
Target Start/End: Complemental strand, 14921995 - 14921798
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||   || |||||    
T  14921995 tctttgtaagcgattgccgtctcctgaactatcttcatgatttttgtttgtagctttgacggctatgatgccccagtatgcgagagatcatgtcgggagt 14921896  T
Q  369 ctcttcattc---atttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     |||||||||    ||||| ||||||||||||||| |||||||||| ||| |||||||||||||| | ||||||||||| |||||||||||||||||||    
T  14921895 atcttcattcttgttttctccagcttcggatacaa-gaactcaaaggtggtagagagtacatggttattgtgttcaacgggtttattaatgcatgattt 14921798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 286 - 523
Target Start/End: Complemental strand, 3360934 - 3360690
Alignment:
Q  286 catcttctggactattttcatgat--ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttca--ttcatt 381  Q
    |||||||||||| || ||| ||||  ||||||||| ||||| ||||| || |||||||||| | | ||||||||| |||  |||||||||||  ||| |     
T  3360934 catcttctggacaatattcttgatatttttgtttgcagcttcgacgggtaagatgccccagcatgcgagagatcttatcgagagtctcttcactttcctc 3360835  T
Q  382 -tcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt--attgttgactttga 478  Q
     |||||| ||||||| | |  ||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||  ||| |||| |||||    
T  3360834 atcttcatcttcggacatagagaactcaaagttggaagagagtacatggttattgtgttcaacgggtttattaatgcatgattttgatttttgattttga 3360735  T
Q  479 cgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    | ||||||||||| ||||||||||||||| |||||| ||| ||||    
T  3360734 caagtaaatgaaaattatgattatgcagatatttgaaaatgatta 3360690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 283 - 410
Target Start/End: Complemental strand, 39531172 - 39531042
Alignment:
Q  283 tgccatcttctggactattttcatgatttttgttt-gtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatt 381  Q
    |||||||||||||| ||| |||||||||||||||| |||||||||| ||||| |||||||||||| | |||||||||  ||| ||||||||||||||||     
T  39531172 tgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgagtctcttcattcatg 39531074  T
Q  382 tc---ttcagcttcggatacaaggaactcaaa 410  Q
    ||   |||||||||||||||||||||||||||    
T  39531073 tctctttcagcttcggatacaaggaactcaaa 39531042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 310 - 505
Target Start/End: Complemental strand, 9188063 - 9187864
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcat---ttcttcagcttcggatacaaggaact 406  Q
    ||||||||| |||||||||||||| |||||||||||  | |||||||||     |||||||||||||||     ||||||| ||||||  |||| |||||    
T  9188063 ttttgtttgcagctttgacggctaagatgccccagtgggcgagagatcttgctgggagtctcttcattctcctcttcttcatcttcggtcacaaagaact 9187964  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgca 505  Q
    |||| |||| |||||||||||||| | | ||||||||| ||||||||||||||| ||| ||| |||| |||||| |||||    ||||||||||||||||    
T  9187963 caaaattgggagagagtacatggttattatgttcaacgggtttattaatgcatgctttgattattgattttgacaagtaaggacaagttatgattatgca 9187864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 269 - 464
Target Start/End: Complemental strand, 12512702 - 12512506
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgt--ttgtagctttgacggctatgatgccccagtaagtgagagatctcatcagga 366  Q
    |||||||||| || ||||||||||||| | || ||  |||| |||||  |||||||||| ||  ||| |||||||||||| | ||  | ||||||  |||    
T  12512702 tctttataagtgaatgccatcttctggccaatcttt-tgatatttgtaattgtagctttaacaactaagatgccccagtaggcgaatggtctcattggga 12512604  T
Q  367 gtctcttcattcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     ||||||||| |  |||||||| |||||| ||| ||||||||||||||  |||||||||| ||| || |||||||||| ||||||| |||||||||||    
T  12512603 atctcttcatcctcttcttcagtttcggacacagggaactcaaagttgagagagagtacagggttaaagtgttcaacgggtttatttatgcatgattt 12512506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 565 - 619
Target Start/End: Original strand, 3385667 - 3385721
Alignment:
Q  565 aaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  3385667 aaaagcacaaaatgaaaacaaagtcgggatcaaaacgacctttttattaatgatg 3385721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 315 - 513
Target Start/End: Original strand, 12509042 - 12509246
Alignment:
Q  315 tttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcat--tcat-ttcttcagcttcggatacaaggaactcaaag 411  Q
    |||| |||||||||||||| ||||||||| || | ||  ||||||||  ||| |||||||||  || | ||||| |  |||||| ||| |||||||||||    
T  12509042 tttgcagctttgacggctaagatgccccaataggcgaatgatctcattgggaatctcttcatcctcctcttcttaaatttcggacacagggaactcaaag 12509141  T
Q  412 ttggaagagagtacatggtaaatgtgttcaac--gagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgcagac 508  Q
    |||  |||||||||| |||  | |||||||||  | ||||||||||||||||||| ||| |||| | |||| ||||||| ||||||||||| ||||| ||    
T  12509142 ttgagagagagtacagggttgaagtgttcaacgggggtttattaatgcatgatttgattattgattctgacaagtaaataaaagttatgatcatgcaaac 12509241  T
Q  509 atttg 513  Q
    |||||    
T  12509242 atttg 12509246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 612
Target Start/End: Original strand, 16723976 - 16724026
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttatt 612  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16723976 agaaaaagcacaaaatgaaaacaaagtcgggatcaaaacgacctttttatt 16724026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 563 - 619
Target Start/End: Complemental strand, 9187798 - 9187743
Alignment:
Q  563 gaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  9187798 gaaaaagcacaaaataaaa-caaagtcgggatcaaaacgacctttttattaatgatg 9187743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 14874268 - 14874210
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||    
T  14874268 ccagaaaaagcacaaaataaaat-aaagtcgggatcaaaacgacctttttattaatgatg 14874210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 609
Target Start/End: Complemental strand, 16365122 - 16365075
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttttt 609  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16365122 agaaaaagcacaaaataaaagcaaagtcgggatcaaaacgaccttttt 16365075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 609
Target Start/End: Complemental strand, 22708294 - 22708247
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttttt 609  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  22708294 agaaaaagcacaaaataaaagcaaagtcgggatcaaaacgaccttttt 22708247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 15570906 - 15570954
Alignment:
Q  564 aaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttatt 612  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  15570906 aaaaagcacaaaatgaaaacaaagtcgggatcaaaacgacctctttatt 15570954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 15575034 - 15575082
Alignment:
Q  564 aaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttatt 612  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  15575034 aaaaagcacaaaatgaaaacaaagtcgggatcaaaacgacctctttatt 15575082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 603
Target Start/End: Original strand, 3832006 - 3832047
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgac 603  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  3832006 agaaaaagcacaaaataaaagcaaagtcgggatcaaaacgac 3832047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 14921715 - 14921667
Alignment:
Q  564 aaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttatt 612  Q
    |||||||||||||| |||||||||||||||||||| |||||| ||||||    
T  14921715 aaaaagcacaaaatgaaaacaaagtcgggatcaaagcgacctctttatt 14921667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Original strand, 8099348 - 8099395
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||    
T  8099348 ccagaaaaagcacaaaataaaaacgaggtcgggatcaagacgaccttt 8099395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 464
Target Start/End: Original strand, 26216667 - 26216747
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| ||||||||||| ||||||| || |  || ||||| ||| | || |||||||||| |||||||||||||||||||    
T  26216667 ttcagcctcggatacaagaaactcaaggtcgagagggagtatatgattaaagtgttcaacgggtttattaatgcatgattt 26216747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 461
Target Start/End: Original strand, 8099189 - 8099256
Alignment:
Q  394 gatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatga 461  Q
    ||||||||||||||||||| |  | |||||||| |||  | |||||||||| ||||||||||||||||    
T  8099189 gatacaaggaactcaaagtcgagaaagagtacaaggtttaagtgttcaacgggtttattaatgcatga 8099256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 33182899 - 33182816
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||| ||| || |||||||||| |||||||| |  ||||| |||| |||  | |||||||||||||||||| |||||||||||    
T  33182899 ttctttagcctcagatacaaggacctcaaagtcgagagagattacaaggtttaagtgttcaacgagtttatttatgcatgattt 33182816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 20557320 - 20557260
Alignment:
Q  562 agaaaaagcacaaaat---aaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||| |   ||||||||||||| |||||| |||||||||||||| ||||||    
T  20557320 agaaaaagcacaaatttaaaaaaacaaagtcgagatcaagacgacctttttattaatgatg 20557260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 597
Target Start/End: Original strand, 26216845 - 26216881
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaa 597  Q
    |||||||||||||||||| |||||||||||||||||||    
T  26216845 ccagaaaaagcacaaaat-aaaacaaagtcgggatcaa 26216881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 8e-75; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 269 - 526
Target Start/End: Original strand, 18946249 - 18946506
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||  |||  || |||||    
T  18946249 tctttgtaagcgattaccatcttctggactatcttcatgatttttgtttgtagctttgacggctatgatgccccagcatgtgagat-tcttgtcgggagt 18946347  T
Q  369 ctcttcattcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattta-tt 467  Q
    |||||| |||  |||||| |||||||||||||||||||||||||||||||||| | |||||| ||||||||||||| |||||||||||||||||||| ||    
T  18946348 ctcttccttctcttcttcggcttcggatacaaggaactcaaagttggaagagatttcatggttaatgtgttcaacgggtttattaatgcatgatttattt 18946447  T
Q  468 gttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataattatta 526  Q
     |||| |||||| ||||| |  |||||||||||||||||| |||||| |||||||||||    
T  18946448 attgattttgacaagtaagtacaagttatgattatgcagatatttgaaaataattatta 18946506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 269 - 514
Target Start/End: Original strand, 618986 - 619234
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttg-tagctttgacggctatgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||  ||| |||    
T  618986 tctttgtaagtgagtgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgag 619084  T
Q  368 tctcttcattcatttct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| ||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  619085 tctcttcatccatgtctctttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 619184  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttga 514  Q
    |||||||| |||||| ||||| |  |||||||||||||||||| ||||||    
T  619185 attgttgattttgacaagtaagtataagttatgattatgcagatatttga 619234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 269 - 513
Target Start/End: Original strand, 24146536 - 24146783
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttg-tagctttgacggctatgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||  ||| |||    
T  24146536 tctttgtaagtgagtgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgag 24146634  T
Q  368 tctcttcattcatttct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| ||| |||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  24146635 tctcttcatccatgtctctttcagcttcggatacaaggaactcaaagttggaagagagtacctggtaaatgtgttcaacgggtttattaatgcatgattt 24146734  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttg 513  Q
    |||||||| |||||| ||||||  ||||||||||||||||||| |||||    
T  24146735 attgttgattttgacaagtaaacaaaagttatgattatgcagatatttg 24146783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 1546518 - 1546259
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||| || ||||    
T  1546518 tctttgtaagcgattgccatcttctggactatcttcatgatttttgtttgtagctttgacggcttatgatgcccctgtatgtgagagatctcgtcgggag 1546419  T
Q  368 tctcttcatt---catttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     |||||||||   |  ||||||| |||||| ||||  ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  1546418 cctcttcattttcctcttcttcatcttcggttacagagaactcaaagttggaagagagtacacggtaaatgtgttcaacgggtttattaatgcatgattt 1546319  T
Q  465 a-ttgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    | || |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  1546318 atttattgattttgacaagtaagtacaagttatgattatgcagatatttgagaatgatta 1546259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 269 - 523
Target Start/End: Original strand, 20043730 - 20043988
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttg-tagctttgacggctatgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| |||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||  ||| |||    
T  20043730 tctttgtaagtgagtgccatcttctggattatcttcatgatttttgtttggtagctttgatggcta-gatgccccagtaggcgagagatcttgtcatgag 20043828  T
Q  368 tctcttcattcatttct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20043829 tctcttcattcatgtctctttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgggtttattaatgcatgattt 20043928  T
Q  465 -attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
     ||| |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  20043929 gattattgattttgacaagtaagtacaagttatgattatgcagatatttgagaatgatta 20043988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 269 - 523
Target Start/End: Original strand, 16820639 - 16820895
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||||||   |||||||||||||||| |||||||||||||| | ||||||||||||| ||||    
T  16820639 tctttgtaagcgattgccatcctctgaactatcttcatgattttt---tgtagctttgacggcttatgatgccccagtatgcgagagatctcatcgggag 16820735  T
Q  368 tctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     |||||||  ||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||||||||    
T  16820736 cctcttcactttcctcttcttcagcttcggatacaaggaactcaaagttggtagagagtacatggttattgtgttcaacgggtttattaatgcatgattt 16820835  T
Q  465 -attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
     ||| |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  16820836 gattattgattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 16820895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 310 - 523
Target Start/End: Original strand, 27071118 - 27071332
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatttcttcagcttcggatacaaggaactcaa 409  Q
    ||||||||| |||||||||||||| ||||||| |||   ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||    
T  27071118 ttttgtttgcagctttgacggctaagatgcccgagtggatgagagatctcatcaggagcctcttcattcttttcttcagcttcgggtacaaggaactcaa 27071217  T
Q  410 agttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgcagac 508  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||| |||||| ||||| |  ||||||||||||||||||     
T  27071218 agttggtagagagtacatggtaaatgtgttcaacgggtttatcaatgcatgatttgattattgattttgacaagtaagtacaagttatgattatgcagat 27071317  T
Q  509 atttgacaataatta 523  Q
    |||||| ||| ||||    
T  27071318 atttgagaatgatta 27071332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 269 - 512
Target Start/End: Complemental strand, 18438105 - 18437858
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||  | ||||||||||   || |||||    
T  18438105 tctttgtaagcgattgccatcttctggactatctttatgatttttgtttgtagctttgacggctatgatgccccaacatgtgagagatcatgtcgggagt 18438006  T
Q  369 ctcttcattcat---ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatg-attt 464  Q
    |||||||||| |   ||||||||||||||||| | ||||||||||||||| ||||||| |||||| | ||||||||||| ||||||||||||||| |||     
T  18438005 ctcttcattcttatcttcttcagcttcggatatagggaactcaaagttggtagagagtccatggttattgtgttcaacgggtttattaatgcatgaattg 18437906  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacattt 512  Q
    ||| |||| |||||| ||||| |  |||||||||||||||||| ||||    
T  18437905 attattgattttgacaagtaagtacaagttatgattatgcagatattt 18437858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 310 - 523
Target Start/End: Original strand, 20455903 - 20456117
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatttcttcagcttcggatacaaggaactcaa 409  Q
    ||||||| | |||||||||||||| |||||||| ||| ||||||||||||||| || | ||||||| |    ||||| ||||||||||||||||||||||    
T  20455903 ttttgttcgcagctttgacggctaagatgccccggtatgtgagagatctcatcgggtgcctcttcactttcctcttctgcttcggatacaaggaactcaa 20456002  T
Q  410 agttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgcagac 508  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |||| |||||| ||||| |  ||||||||||||||||||     
T  20456003 agttggaagagagtacatggttaatgtgttcaacgggtttattaatgcatgatttgattattgattttgacaagtaagtataagttatgattatgcagat 20456102  T
Q  509 atttgacaataatta 523  Q
    |||||||||| ||||    
T  20456103 atttgacaatgatta 20456117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 269 - 523
Target Start/End: Original strand, 20053656 - 20053910
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| ||||| |||||||| ||||||||||| || |||||||||||    ||||||||||||||||||||||||| | ||||||||||   || |||||    
T  20053656 tctttgtaagcaattgccattttctggactatctttatgatttttgt----agctttgacggctatgatgccccagcatgtgagagatcatgtcgggagt 20053751  T
Q  369 ctcttcattcat---ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattta 465  Q
    |||||||||| |   ||||||||||||||||||| ||||||||||||| ||||||| | |||||| ||||||||||||| ||||||||||||||||||||    
T  20053752 ctcttcattcttatcttcttcagcttcggatacagggaactcaaagtttgaagagatttcatggttaatgtgttcaacgggtttattaatgcatgattta 20053851  T
Q  466 ttgttga-ctttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    |||||||  |||||| || || |  |||||||||||||||| | |||||| ||| ||||    
T  20053852 ttgttgatttttgacaagcaagtacaagttatgattatgcaaatatttgagaatgatta 20053910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 27514598 - 27514342
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| ||||||||| ||||| |||| ||||| ||||||||||||   |||||||||| ||||| |||||||||||||| | |||||||||  ||| |||    
T  27514598 tctttgtaagcgattaccatcctctgaactatcttcatgattttt---tgtagctttggcggcttatgatgccccagtatgcgagagatcttgtcatgag 27514502  T
Q  368 tctcttcattcatttct---tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||||| |||   ||| ||||||||||||||||||||||||||| |||| ||||||||| | ||||||||||| |||||||||||||||||||    
T  27514501 tctcttcattcatgtctctttcaacttcggatacaaggaactcaaagttggtagagggtacatggttattgtgttcaacgggtttattaatgcatgattt 27514402  T
Q  465 -attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
     ||| |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  27514401 gattattgattttgacaagtaagtataagttatgattatgcagatatttgagaatgatta 27514342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 310 - 526
Target Start/End: Complemental strand, 19716856 - 19716636
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcat---ttcttcagcttcggatacaaggaact 406  Q
    ||||||| | |||||||||||||| |||||||||||| ||||||||||   || ||||||||||||||| |   ||||||||||||| ||||||||||||    
T  19716856 ttttgttcgcagctttgacggctaagatgccccagtatgtgagagatcatgtcgggagtctcttcattcttgtcttcttcagcttcgaatacaaggaact 19716757  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattta-ttgttgactttgacgagtaaatgaaagttatgattatgca 505  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| |||| | |||||    |||||||| |||||||    
T  19716756 caaagttggaagagagtacatggtaaatgtgttcaacgaatttattaatgcatgatttatttattgattttggcaagtaagaacaagttatggttatgca 19716657  T
Q  506 gacatttgacaataattatta 526  Q
    || |||||| ||| |||||||    
T  19716656 gatatttgaaaatgattatta 19716636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 310 - 507
Target Start/End: Original strand, 22776055 - 22776253
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatttcttcagcttcggatacaaggaactcaa 409  Q
    ||||||||| ||||||||| |||| |||||||||||| | ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |    
T  22776055 ttttgtttgcagctttgacagctaagatgccccagtatgcgagagatctcatcgggagtctcttcattcttttcttcagcttcggatacaaggaactcga 22776154  T
Q  410 agttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcat-gatttattgttgactttgacgagtaaatgaaagttatgattatgcaga 507  Q
    ||||||||||||||||||| | | || |||||||| ||||||||||||||  ||| ||| |||| |||||| ||||| |  |||||||||||| |||||    
T  22776155 agttggaagagagtacatgtttattgcgttcaacgggtttattaatgcataaattgattattgattttgacaagtaagtacaagttatgattaagcaga 22776253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 281 - 462
Target Start/End: Complemental strand, 22327135 - 22326956
Alignment:
Q  281 attgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttca---tt 377  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| |||||||   |     
T  22327135 attgccatcttctggactatcttcatgatttttgtttgtagctttgacggctatgatgccccagcatgtgagagatctcatcgggagcctcttcactttc 22327036  T
Q  378 catttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgat 462  Q
    | |||||||| ||||||||| | | ||||||||||||| |||||||||||     |||||||||||| |||||||||||||||||    
T  22327035 cttttcttcatcttcggataaaggaaactcaaagttgggagagagtacat-----atgtgttcaacgggtttattaatgcatgat 22326956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 310 - 479
Target Start/End: Original strand, 15649475 - 15649649
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattca---tttcttcagcttcggatacaaggaact 406  Q
    ||||||||| ||||| |||||||| ||||||| |||| | |||| |||||||  |||  || ||||| |    |||||||||| ||||||||||||||||    
T  15649475 ttttgtttgcagcttcgacggctaagatgccctagtaggcgagatatctcattgggaaacttttcatcctccttttcttcagcctcggatacaaggaact 15649574  T
Q  407 caaagttgga--agagagtacatggtaaatgtgttcaacgagtttattaatgcatgatttattgttgactttgac 479  Q
    |||||||||   |||||||||| ||| ||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  15649575 caaagttgggggagagagtacaaggttaatgtgttcaacgggtttatcaatgcatgatttattgttgattttgac 15649649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 20898521 - 20898455
Alignment:
Q  181 tttaagtttatacaatataaaacttcagataataattttaatatttgtgtaacttaaatatacataa 247  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20898521 tttaagtttatacaatataaaacttcagagaataattttaatatttgtgtaacttaaatatacataa 20898455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 5990513 - 5990430
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| ||||||||||||||||||| || |  |||||||||| ||| || |||||||||| |||||||||||||||||||    
T  5990513 ttcttcagcctcggatacaaggaactcaaggtcgagagagagtacaaggttaaagtgttcaacgggtttattaatgcatgattt 5990430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 562 - 617
Target Start/End: Complemental strand, 27514303 - 27514248
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatga 617  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  27514303 agaaaaagcacaaaataaaagcaaagtcgggatcaaaacgacctttttattaatga 27514248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 22326871 - 22326814
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  22326871 agaaaaagcacaaaatgaaaacaaagtcgggatcaaaacgacttttttattaatgatg 22326814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 24146830 - 24146887
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  24146830 agaaaaagcacaaaatgaaaataaagtcgggatcaaaacgacctttttattaatgatg 24146887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 562 - 618
Target Start/End: Complemental strand, 18437806 - 18437750
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgat 618  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  18437806 agaagaagcacaaaatgaaaacaaagtcgggatcaaaacgacctttttattaatgat 18437750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 16583258 - 16583175
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| |||||||||||||||||||||| |  || ||||| ||| | || |||||||||| |||||||||||||||||||    
T  16583258 ttcttcagcctcggatacaaggaactcaaagtcgagagggagtatatgattaaagtgttcaacgggtttattaatgcatgattt 16583175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 16612122 - 16612205
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| |||||||||||||||||||||| |  || ||||| ||| | || |||||||||| |||||||||||||||||||    
T  16612122 ttcttcagcctcggatacaaggaactcaaagtcgagagggagtatatgattaaagtgttcaacgggtttattaatgcatgattt 16612205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 609
Target Start/End: Original strand, 16820934 - 16820981
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttttt 609  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16820934 agaaaaagcacaaaataaaagcaaagtcgggatcaaaacgaccttttt 16820981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 619282 - 619340
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatc-aaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  619282 agaaaaagcacaaaataaaagcaaagtcgggatcaaaaacgacctttttattaatgatg 619340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 565 - 619
Target Start/End: Complemental strand, 19716600 - 19716546
Alignment:
Q  565 aaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  19716600 aaaagcacaaaatgaaaaccaagtcgggatcaaaacgacctttttattaatgatg 19716546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 1546219 - 1546162
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  1546219 agaagaagcacaaaataaaaataaagttgggatcaaaacgacctttttattaatgatg 1546162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 20456160 - 20456217
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||||| ||||||    
T  20456160 agaagaagcacaaaatgaaaacaaagtcgggatcaaaatgacctttttattaatgatg 20456217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 20053948 - 20054006
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||    
T  20053948 ccagaaaaagcacaaaataaaa-caaagttgggatcaaaacgacatttttattaatgatg 20054006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 28356248 - 28356165
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| || ||||||||||||||||||| |   ||||||||| |||  | |||||||||| |||||||||||||||||||    
T  28356248 ttcttcagcctcagatacaaggaactcaaagtcgagcgagagtacagggtttaagtgttcaacgggtttattaatgcatgattt 28356165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 561 - 619
Target Start/End: Original strand, 18946548 - 18946605
Alignment:
Q  561 cagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||| ||||||    
T  18946548 cagaaaaagcacaaaataaaat-aaagtcgggctcaaaacgacctttttattaatgatg 18946605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 27071389 - 27071446
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| ||||||||| | ||||||||||||||||||||||||| |||||||| ||||||    
T  27071389 agaagaagcacaaagtgaaaacaaagtcgggatcaaaacgacttttttattaatgatg 27071446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 464
Target Start/End: Complemental strand, 16638291 - 16638211
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| ||||||||||||||||||| || |  || ||||| ||| | || |||||||||| |||||||||||||||||||    
T  16638291 ttcagcctcggatacaaggaactcaaggtcgagagggagtatatgattaaagtgttcaacgggtttattaatgcatgattt 16638211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 28307443 - 28307360
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| || |||||||||||||||||||     ||||||||| |||  | |||||||||| |||||||||||||||||||    
T  28307443 ttcttcagcctcagatacaaggaactcaaagtcaagcgagagtacagggtttaagtgttcaacgggtttattaatgcatgattt 28307360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 18912511 - 18912454
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||| ||||||||| ||||||||||||||||||||  | |||||| ||||||    
T  18912511 agaaaaagcataaaataaaatcaaagtcgggatcaaaacgatatatttattaatgatg 18912454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 619
Target Start/End: Original strand, 20044032 - 20044072
Alignment:
Q  579 aaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  20044032 aaaataaagtcgggatcaaaacgacctttttattaatgatg 20044072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 21007714 - 21007663
Alignment:
Q  192 acaatataaaacttcagataataattttaatatttgtgtaacttaaatataca 244  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| |||||||||    
T  21007714 acaatataaaacttcagagaatgatttt-atatttgtgtaactaaaatataca 21007663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 25502574 - 25502655
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| || ||||||||||||||||||| |  ||||||||||  ||  | |||||||||| |||| ||||||||||||||    
T  25502574 ttcttcagcctcagatacaaggaactcaaagtcg--agagagtacaacgtttaagtgttcaacgggtttgttaatgcatgattt 25502655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 5990344 - 5990297
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||||| |||| ||||||  ||||||||    
T  5990344 ccagaaaaagcacaaaataaaaacaaggtcgagatcaaggcgaccttt 5990297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 16638121 - 16638074
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||| |||||||||||||||| || ||||||||||| |||||||||    
T  16638121 ccagaataagcacaaaataaaaataaggtcgggatcaagacgaccttt 16638074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 27054850 - 27054917
Alignment:
Q  397 acaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||||||||||||| |   ||||||||| |||  | |||||||||| |||||||||||||||||||    
T  27054850 acaaggaactcaaagtcgagcgagagtacagggtttaagtgttcaacgggtttattaatgcatgattt 27054917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 523
Target Start/End: Complemental strand, 22326954 - 22326912
Alignment:
Q  481 agtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||    
T  22326954 agtaaatgaaagttatgattatgcagatatttgagaatgatta 22326912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 15649729 - 15649777
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttttt 609  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||| |||||    
T  15649729 ccagaaaaagtacaaagtaaaa-caaagtcgggatcaaaacgactttttt 15649777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 597
Target Start/End: Complemental strand, 28307268 - 28307232
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaa 597  Q
    |||||||||||||||||| |||||||||||||||||||    
T  28307268 ccagaaaaagcacaaaat-aaaacaaagtcgggatcaa 28307232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 597
Target Start/End: Complemental strand, 28356073 - 28356037
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaa 597  Q
    |||||||||||||||||| |||||||||||||||||||    
T  28356073 ccagaaaaagcacaaaat-aaaacaaagtcgggatcaa 28356037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1197 (Bit Score: 137; Significance: 3e-71; HSPs: 2)
Name: scaffold1197
Description:

Target: scaffold1197; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 462 - 204
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctca-tcaggag 367  Q
    ||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| | |||| |||||||||||   || ||||    
T  462 tctttgtaagcaattgccatcttctggactatcttcatgatttttgtttgcagctttgacggctacgatgctctagtatgtgagagatctttgtcgggag 363  T
Q  368 tctcttcattcat---ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||||| |   ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||    
T  362 tctcttcattcttgtcttcttcagcttcgaatacaaggaactcaaagttggaagatagtacatggtaaatgtggtcaacgggtttattaatgcatgattt 263  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    |||||||| |||||  ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  262 attgttgattttgaaaagtaagtacaagttatgattatgcagatatttgagaatgatta 204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1197; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 565 - 619
Target Start/End: Complemental strand, 161 - 107
Alignment:
Q  565 aaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  161 aaaagcacaaaatgaaaacaaagtcgggatcaaaacgacctttttattaatgatg 107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 269 - 514
Target Start/End: Original strand, 30500 - 30749
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||     
T  30500 tctttgtaagcgatttccatcttctggaccatgttcatgatttttgtttgtagctttgacggctatgatgccccagcatgtgagagatctcatcgggagc 30599  T
Q  369 ctcttcatt---catttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt- 464  Q
    |||||||||   |  |||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||| |||||||||||||||||||     
T  30600 ctcttcattttcctcttcttcagcttcggatacaaggaaatcaaagttgatagagagtacatggttaatgtgttcaacgggtttattaatgcatgatttg 30699  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttga 514  Q
    ||| |||| |||||| ||||| |  ||||||| |||||||||| ||||||    
T  30700 attattgattttgacaagtaagtacaagttataattatgcagatatttga 30749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 565 - 619
Target Start/End: Original strand, 30802 - 30856
Alignment:
Q  565 aaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  30802 aaaagcacaaaatgaaaacaaagtcgggatcaaaacgacttttttattaatgatg 30856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 1e-70; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 19372446 - 19372191
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| || ||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||| | ||||||||||||||| || |     
T  19372446 tctttgtatgcgattgccatcttctggactatcttcatgatttttgtttgtacctttaacggctatgatgccccagcatgtgagagatctcatcgggtgc 19372347  T
Q  369 ctcttcattcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-att 467  Q
    || |||| |    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| |||    
T  19372346 ctattcactttcctcttctgcttcggatacaaggaactcaaagttggaagagagtacatggttaatgtgttcaacaggtttattaatgcatgatttgatt 19372247  T
Q  468 gttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
     |||| |||||| ||||| |  |||||||||||||||||| |||||||||| ||||    
T  19372246 attgattttgacaagtaagtataagttatgattatgcagatatttgacaatgatta 19372191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 269 - 514
Target Start/End: Original strand, 6200606 - 6200855
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||     
T  6200606 tctttgtaagcgactgccatcttctggactatcttcatgatttttgtttgtagctttgacggcaatgatgccccagcatgtgagagatctcatcgggagc 6200705  T
Q  369 ctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt- 464  Q
    |||||||  ||| | || |||||||||||||||||||||||||||||||| |||||||||||||| |  |||||||||| |||||||||||||||||||     
T  6200706 ctcttcactttcctctttttcagcttcggatacaaggaactcaaagttggtagagagtacatggttatggtgttcaacgggtttattaatgcatgatttg 6200805  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttga 514  Q
    ||| |||| |||||| ||||| |  | |||||||||||||||| ||||||    
T  6200806 attattgattttgacaagtaagtataggttatgattatgcagatatttga 6200855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 269 - 514
Target Start/End: Original strand, 14816678 - 14816928
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgcccc-agtaagtgagagatctcatcaggag 367  Q
    ||||| ||||||||| |||| |||| || ||| ||||||||||||||||||||||||||||||||||||||||| |  | ||||||||| ||||| ||||    
T  14816678 tctttgtaagcgattaccatattctagattatcttcatgatttttgtttgtagctttgacggctatgatgcccccaacatgtgagagatttcatcgggag 14816777  T
Q  368 tctcttca---ttcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     |||||||   |||  ||||||| ||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||    
T  14816778 cctcttcacttttctcttcttcatcttcggacacagggaactcaaagttgggagagagtacatggttaatgtgttcaacgggtttattaatgcatgagtt 14816877  T
Q  465 attgttga-ctttgacgagtaaatgaaagttatgattatgcagacatttga 514  Q
    ||| ||||  |||||| | ||||||||||||||||||||||||||||||||    
T  14816878 attattgatttttgacaactaaatgaaagttatgattatgcagacatttga 14816928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 302 - 523
Target Start/End: Complemental strand, 22431113 - 22430888
Alignment:
Q  302 ttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatttc---ttcagcttcggatac 398  Q
    |||||||||||||||||||||||||||||||||||||||||| || | | ||||||   || ||| ||||| ||||| | ||   |||||||||||||||    
T  22431113 ttcatgatttttgtttgtagctttgacggctatgatgccccaatatgcgtgagatcatgtcgggattctctccattcttgtcatcttcagcttcggatac 22431014  T
Q  399 aaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatg 497  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||| ||| |||| ||||||  |||| |  ||||||||    
T  22431013 aaggaactcaaagttggaagagaatacatggttaatgtgttcaacgggtttatcaatgcatgatttgattattgattttgacaggtaagtacaagttatg 22430914  T
Q  498 attatgcagacatttgacaataatta 523  Q
    |||||||||| |||||| ||| ||||    
T  22430913 attatgcagatatttgagaatgatta 22430888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 310 - 526
Target Start/End: Complemental strand, 35072780 - 35072560
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttca--ttcat-ttcttcagcttcggatacaaggaact 406  Q
    ||||||||| |||||||| ||||| |||||||||||| ||||||||||||||  |||| || ||||  ||| | ||||||| ||||||||| | | ||||    
T  35072780 ttttgtttgcagctttgatggctaagatgccccagtatgtgagagatctcattgggagccttttcactttcctcttcttcatcttcggataaaggaaact 35072681  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattta-ttgttgactttgacgagtaaatgaaagttatgattatgca 505  Q
    ||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||| || |||| |||||| ||||| |  ||||||||||||||||    
T  35072680 caaagttgggagagtgtacatggttaatgtgttcaacgggtttattaatgcatgatttatttattgattttgacaagtaagtacaagttatgattatgca 35072581  T
Q  506 gacatttgacaataattatta 526  Q
    || |||||| ||| |||||||    
T  35072580 gatatttgaaaatgattatta 35072560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 181 - 269
Target Start/End: Complemental strand, 41332149 - 41332061
Alignment:
Q  181 tttaagtttatacaatataaaacttcagataataattttaatatttgtgtaacttaaatatacataagataaaataaaaaggaatcatt 269  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41332149 tttaagtttatacaatataaaacttcaaataataattttaatatttgtgtaacttaaatatacataagataaaataaaaaggaatcatt 41332061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 310 - 462
Target Start/End: Complemental strand, 1959054 - 1958898
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatttcttc---agcttcggatacaaggaa-c 405  Q
    ||||||| | |||||||||||||| |||||||||||    ||||||||   || ||||||||||||||| | |||||   |||||| ||||||||||| |    
T  1959054 ttttgttggcagctttgacggctaagatgccccagtggacgagagatcatgtcgggagtctcttcattcttgtcttctttagcttcagatacaaggaaac 1958955  T
Q  406 tcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgat 462  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  1958954 tcaaagttgggagagagtacatggttaatgtgttcaacgggtttattaatgcatgat 1958898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 402 - 526
Target Start/End: Original strand, 2339098 - 2339223
Alignment:
Q  402 gaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgatt 500  Q
    |||||||||||||| ||||||||||| || | | ||||||||| ||||||||||||||||||| ||| |||| |||||| ||||| |  ||| |||||||    
T  2339098 gaactcaaagttgggagagagtacatagttattatgttcaacgggtttattaatgcatgatttgattattgattttgacaagtaagtacaagctatgatt 2339197  T
Q  501 atgcagacatttgacaataattatta 526  Q
    ||||||| || ||| ||| |||||||    
T  2339198 atgcagatatatgagaatgattatta 2339223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 31556160 - 31556077
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||| | |||||||||||||||||||||| |  ||||||||||||||  | |||||||||| |||||||||||||||||||    
T  31556160 ttcttcaacctcggatacaaggaactcaaagtcgagagagagtacatggtttaagtgttcaacgggtttattaatgcatgattt 31556077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 41342340 - 41342265
Alignment:
Q  185 agtttatacaat-ataaaacttcagataataattttaatatttgtgtaacttaaatatacataagataaaataaaa 259  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||| || || |||||||||||    
T  41342340 agtttatacaattataaaacttcagagaataattttaatatttgtgtaactaaaatatgcagaaaataaaataaaa 41342265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 455
Target Start/End: Complemental strand, 2388699 - 2388625
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaat 455  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||  | |||||||||| ||||||||||    
T  2388699 ttcttcagcctcggatacaaggaactcaaagttgggagagagtacaaggtttaagtgttcaacgggtttattaat 2388625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 13467817 - 13467734
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||| | |||||||||||||||||||||| |  ||| ||||||||||  | |||||||||| |||||||||||||||||||    
T  13467817 ttcttcaacctcggatacaaggaactcaaagtcgagagaaagtacatggtttaagtgttcaacgtgtttattaatgcatgattt 13467734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 13472811 - 13472728
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||| | |||||||||||||||||||||| |  ||| ||||||||||  | |||||||||| |||||||||||||||||||    
T  13472811 ttcttcaacctcggatacaaggaactcaaagtcgagagaaagtacatggtttaagtgttcaacgtgtttattaatgcatgattt 13472728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 6200895 - 6200952
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||||| ||||||    
T  6200895 agaaaaagcacaaaacaaaagcaaagtcgggatcaaagcgacctttttattaatgatg 6200952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 14816972 - 14817029
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||| |||||| |||||||||||| ||||||||||||||||||||| ||||||    
T  14816972 agaaaaagcgcaaaatgaaaacaaagtcgagatcaaaacgacctttttattaatgatg 14817029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 19372150 - 19372093
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||    
T  19372150 agaagaagcacaaaatgaaaacaaagtagggatcaaaacgacctttttattaatgatg 19372093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 41332273 - 41332203
Alignment:
Q  57 ttatgtaagcatagctcaattgatcaaaatttatgatatnnnnnnnttatgcgagcatagctctgttgact 127  Q
    ||||||||||||||||||||||||||||| |||||||||       ||||| |||||||||||||||||||    
T  41332273 ttatgtaagcatagctcaattgatcaaaaattatgatataaaaaaattatgggagcatagctctgttgact 41332203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 1958813 - 1958755
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgac-ctttttattgatgatg 619  Q
    |||||||||||||||| |||||||||||||||||||||||||  |||||||| ||||||    
T  1958813 agaaaaagcacaaaatgaaaacaaagtcgggatcaaaacgactatttttattaatgatg 1958755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 562 - 612
Target Start/End: Complemental strand, 22430847 - 22430797
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttatt 612  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  22430847 agaagaagcacaaaataaaaacaaaaacgggatcaaaacgacctttttatt 22430797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 564 - 600
Target Start/End: Complemental strand, 9296466 - 9296430
Alignment:
Q  564 aaaaagcacaaaataaaaacaaagtcgggatcaaaac 600  Q
    |||||||||||||||||||||||||||||||||||||    
T  9296466 aaaaagcacaaaataaaaacaaagtcgggatcaaaac 9296430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 269 - 456
Target Start/End: Complemental strand, 9296774 - 9296582
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgat--ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcagga 366  Q
    ||||||||||  ||| ||||||| ||||| || ||| ||||  ||||||||| ||||| ||| |||| ||| ||| |||| | ||||||||||||| |||    
T  9296774 tctttataagtaatttccatcttttggacaatcttcttgatatttttgtttgcagcttcgacagctaagataccctagtaggcgagagatctcatcggga 9296675  T
Q  367 gtctcttca---ttcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatg 456  Q
     ||||||||   | |  |||||||||||| || | | ||||||||| ||| | ||| |||||||||| || ||||| |||| |||||| ||||    
T  9296674 atctcttcatcttccccttcttcagcttcagacatagggaactcaatgtttggagaaagtacatggttaaggtgttaaacgggtttatcaatg 9296582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 31544060 - 31543977
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| || |||| |||||||||||||| |  |||||||||  |||  | |||||||||| |||||||||||||||||||    
T  31544060 ttcttcagcctcagatataaggaactcaaagtcgagagagagtaccaggtttaagtgttcaacgggtttattaatgcatgattt 31543977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 31555988 - 31555942
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  31555988 ccagaaaaagcacaaaataaaa-caaagtcgggatcaagacgaccttt 31555942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 561 - 607
Target Start/End: Complemental strand, 31543888 - 31543842
Alignment:
Q  561 cagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  31543888 cagaaaaagcaaaaaataaaaacaaggtcgggatcaagacgaccttt 31543842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 13467646 - 13467600
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  13467646 ccagaaaaagcacaaaat-aaaacaaggtcgggatcaagacgaccttt 13467600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 13472640 - 13472594
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  13472640 ccagaaaaagcacaaaat-aaaacaaggtcgggatcaagacgaccttt 13472594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 523
Target Start/End: Complemental strand, 1958896 - 1958854
Alignment:
Q  481 agtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||    
T  1958896 agtaaatgaaagttatgattatgcagatatttgagaatgatta 1958854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 2e-66; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 24693664 - 24693406
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||| ||||     
T  24693664 tctttgtaagcgattgccatcttctgaactatcttcatgatttttgtttgtagctttgatggctatgatgccccaacatgtgagagatctcatcgggagc 24693565  T
Q  369 ctcttcatt---catttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt- 464  Q
    |||||||||   |  ||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||||||| |||||||||||||||||||     
T  24693564 ctcttcattttcctcttcttcagcttcggatacaaggaactcaaagttggtagatagtacatggttattgtgttcaacgggtttattaatgcatgatttg 24693465  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    ||  |||| |||||| ||||| |  |||||||||| ||||||| |||||| ||| ||||    
T  24693464 atcattgattttgacaagtaagtacaagttatgatcatgcagatatttgagaatgatta 24693406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 24702655 - 24702399
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||| ||| |  | ||||||||||||||| ||||     
T  24702655 tctttgtaagcgattgccatcttctggactatcttcatgatttttatttgtagctttaatggctatgataccctaacatgtgagagatctcatcgggagc 24702556  T
Q  369 ctcttca--ttcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-a 465  Q
    |||||||  |||  |||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||| |||| ||||||||||||||||||| |    
T  24702555 ctcttcattttctcttcttcagcttcggatacaaggaactcaaatttggtagatagtacatggttattgtgtttaacgggtttattaatgcatgatttga 24702456  T
Q  466 ttgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    || |||| |||||| ||||| |  |||||||||| ||||||| |||||| ||| ||||    
T  24702455 ttattga-tttgacaagtaagtacaagttatgatcatgcagatatttgagaatgatta 24702399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 402 - 507
Target Start/End: Original strand, 20278045 - 20278151
Alignment:
Q  402 gaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgatt 500  Q
    |||||||||||||| || ||||||||||| | ||||||||||| ||||||||||||||||||| ||| || | |||||| ||||| |  |||||||||||    
T  20278045 gaactcaaagttgggagcgagtacatggttattgtgttcaacgggtttattaatgcatgatttgattattaattttgacaagtaagtacaagttatgatt 20278144  T
Q  501 atgcaga 507  Q
    |||||||    
T  20278145 atgcaga 20278151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 25498561 - 25498514
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  25498561 ccagaaaaagcacaaaataaaaacaaggtcgggatcaaaacgaccttt 25498514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 25498715 - 25498632
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| || ||||||||||||||||||| |  |||||||||| |||  | |||||||||| |||||||||||||||||||    
T  25498715 ttcttcagcctcagatacaaggaactcaaagtcgagagagagtacaaggtttaagtgttcaacgggtttattaatgcatgattt 25498632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 561 - 619
Target Start/End: Original strand, 20278206 - 20278263
Alignment:
Q  561 cagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||    
T  20278206 cagaaaaagcacaaaataaaat-aaagtcgggatcaaaacgacctttttattaatgatg 20278263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 562 - 624
Target Start/End: Complemental strand, 24693368 - 24693306
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatgtccat 624  Q
    |||| ||||||||||| ||||||||||||||||| |||||||||||||||| |||||| ||||    
T  24693368 agaagaagcacaaaatgaaaacaaagtcgggatcgaaacgacctttttattaatgatgaccat 24693306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 384 - 464
Target Start/End: Complemental strand, 24289229 - 24289149
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| ||||| ||||||||||||||||||  |||||||||| ||| |   ||||||||| |||||||||||||||||||    
T  24289229 ttcagcctcggacacaaggaactcaaagttgagagagagtacagggttacattgttcaacgggtttattaatgcatgattt 24289149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 15949118 - 15949201
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||| ||| || ||||||| |||||||| || |  |||||||||||||| || |||||||||| |||||||||||||||||||    
T  15949118 ttcttaagcctcagatacaaagaactcaaggtcgagagagagtacatggttaaagtgttcaacgggtttattaatgcatgattt 15949201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 20614668 - 20614621
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  20614668 ccagaaaaagcacaaaataaaaacaaggtcgggatcaagacgaccttt 20614621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 24289061 - 24289014
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||    
T  24289061 ccagaaaaagcacaaaataaaaacaaagtcgggatcgagacgaccttt 24289014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 21117119 - 21117049
Alignment:
Q  394 gatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| ||||||| ||||||| |||||| ||| ||| || ||||||||||| ||||||||||||||||||    
T  21117119 gatacacggaactctaagttgggagagagaacaaggttaaagtgttcaacgaatttattaatgcatgattt 21117049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 564 - 607
Target Start/End: Original strand, 15949294 - 15949337
Alignment:
Q  564 aaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  15949294 aaaaagcacaaaataaaaacaaggtcgggatcaagacgaccttt 15949337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 16277585 - 16277502
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| ||  |||||||||||||||||| |   ||||||||| |||  | |||||||||| |||||||||||||||||||    
T  16277585 ttcttcagcctcatatacaaggaactcaaagtcgagcgagagtacagggtttaagtgttcaacgggtttattaatgcatgattt 16277502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 35142551 - 35142504
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  35142551 ccagaaaaagcaaaaaataaaaacaaggtcgggatcaagacgaccttt 35142504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 35142722 - 35142639
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| || |||| |||||||||||||| |  |||||||||  |||  | |||||||||| |||||||||||||||||||    
T  35142722 ttcttcagcctcagatataaggaactcaaagtcgagagagagtaccaggtttaagtgttcaacgggtttattaatgcatgattt 35142639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Original strand, 42570766 - 42570813
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||    
T  42570766 ccagaaaaagcacaaaataaaaacgaggtcgggatcaagacgaccttt 42570813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 562 - 624
Target Start/End: Complemental strand, 24702352 - 24702290
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatgtccat 624  Q
    |||| ||||||||||| |||||||||| || ||| |||||||||||||||| |||||| ||||    
T  24702352 agaagaagcacaaaatgaaaacaaagttggaatcgaaacgacctttttattaatgatgaccat 24702290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 464
Target Start/End: Original strand, 3762508 - 3762588
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| ||||||||||||||||||| || |  || ||||| ||| | || ||||||||||  ||||||||||||||||||    
T  3762508 ttcagcctcggatacaaggaactcaaggtcgagagggagtatatgattaaagtgttcaacggatttattaatgcatgattt 3762588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 20614842 - 20614758
Alignment:
Q  381 ttcttcagcttcggatacaaggaa-ctcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| || ||||||| ||| |||||||| |  |||||||||| ||| || |||||||| | |||||||||||||||||||    
T  20614842 ttcttcagcctcagatacaaagaaactcaaagtcgagagagagtacagggttaaagtgttcaatgggtttattaatgcatgattt 20614758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 464
Target Start/End: Original strand, 30689385 - 30689465
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| ||||||||||||||||||| || |  || ||| | ||| | || |||||||||| |||||||||||||||||||    
T  30689385 ttcagcctcggatacaaggaactcaaggtcgagagggagcatatgattaaagtgttcaacgggtttattaatgcatgattt 30689465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 461
Target Start/End: Original strand, 42570594 - 42570674
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatga 461  Q
    |||||||||  | ||||||||||||||||||| |  | |||||||| |||  | |||||||||| ||||||||||||||||    
T  42570594 ttcttcagccccagatacaaggaactcaaagtcgagaaagagtacaaggtttaagtgttcaacgggtttattaatgcatga 42570674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 3762686 - 3762743
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||||| ||| ||||||    
T  3762686 ccagaaaaagcacaaaat-aaaacaaagtcgggatc-aagcgaccttttcattaatgatg 3762743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 21856067 - 21856134
Alignment:
Q  397 acaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||||||||||||| |   ||||||||| |||  | |||||||||| |||||||||||||||||||    
T  21856067 acaaggaactcaaagtcgagcgagagtacagggtttaagtgttcaacgggtttattaatgcatgattt 21856134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 597
Target Start/End: Original strand, 30689561 - 30689597
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaa 597  Q
    |||||||||||||||||| |||||||||||||||||||    
T  30689561 ccagaaaaagcacaaaat-aaaacaaagtcgggatcaa 30689597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 125; Significance: 5e-64; HSPs: 2)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 269 - 503
Target Start/End: Complemental strand, 7632 - 7394
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||  ||||     
T  7632 tctttgtaagcgattgccatcttctggactatcttcatgatttttgtttgtagctttgatggctatgatgccccagcatgtgagagatctcattgggagc 7533  T
Q  369 ctcttca---ttcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattta 465  Q
    |||||||   | |  ||||||| ||||||| | | ||||||||||||||| |||||||||||||| | ||||||||||| | ||||||||||||||||||    
T  7532 ctcttcactgtcctcttcttcatcttcggacatagggaactcaaagttgggagagagtacatggttattgtgttcaacgggcttattaatgcatgattta 7433  T
Q  466 ttgttga-ctttgacgagtaaatgaaagttatgattatg 503  Q
    || ||||  |||||| |||||||||||||||||||||||    
T  7432 ttattgatttttgacaagtaaatgaaagttatgattatg 7394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 7329 - 7280
Alignment:
Q  564 aaaaagcacaaaat-aaaaacaaagtcgggatcaaaacgacctttttatt 612  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  7329 aaaaaacacaaaatgaaaaacaaagtcgggatcaaaacgacctttttatt 7280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 125; Significance: 5e-64; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 269 - 512
Target Start/End: Complemental strand, 10030 - 9783
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| |||| | ||||||| ||||| ||||     
T  10030 tctttgtaagcgattgccatcttctggactatcttcatgatttttgtttgtagctttgacgactaagatgccctagtatgcgagagatttcatcgggagc 9931  T
Q  369 ctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt- 464  Q
    |||||||  ||| | ||||||| ||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||||||||     
T  9930 ctcttcactttcctcttcttcatcttcggatacaaggaactcaaagttggtagagagtacatggttattgtgttcaacgggtttattaatgcatgatttg 9831  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacattt 512  Q
    ||| |||| |||||| ||||| |  | |||||||||||||||| ||||    
T  9830 attattgattttgacaagtaagtataggttatgattatgcagatattt 9783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 9726 - 9668
Alignment:
Q  562 agaaaaagcacaaaataaaaa-caaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||    
T  9726 agaaaaagcacaaaataaaaaacaaagtcgggatcaagacgacctttttattaatgatg 9668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 124; Significance: 2e-63; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 11816 - 11559
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||| ||||     
T  11816 tctttgtaagcaattgccatcttctggactatcttcatgattttt-tttgtagctttgacggctaagatgccccagtatgtgagagatctcatcgggagc 11718  T
Q  369 ctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt- 464  Q
     ||||||  ||| | ||||| ||||||||||||||||||||||||||||| |||||||||||||| | ||||||||| | ||||||||||||||| |||     
T  11717 ttcttcactttcctcttctttagcttcggatacaaggaactcaaagttggtagagagtacatggttattgtgttcaatgggtttattaatgcatgctttg 11618  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    ||| |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  11617 attattgattttgacaagtaagtacaagttatgattatgcagatatttgagaatgatta 11559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 11520 - 11463
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11520 agaagaagaacaaaataaaaacaaagtcgggatcaaaacgacctttttattaatgatg 11463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 120; Significance: 4e-61; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 18128 - 17870
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| ||||||||| ||||||| |  ||||| || ||||||||||||||||||||||| |||||||||||||||| | || |||||||||||| ||||     
T  18128 tctttgtaagcgatttccatcttataaactatctttatgatttttgtttgtagctttgatggctatgatgccccagcatgttagagatctcatcgggagc 18029  T
Q  369 ctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt- 464  Q
    || ||||  ||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||     
T  18028 cttttcactttcctcttcttcagcttcggatacaaggaactcaaagttggtagagagtacatggtaaatgtgttcaacgggtttatcaatgcatgatttg 17929  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    ||| |||| |||||| ||||| |  |||||||||||||| ||| |||||| ||| ||||    
T  17928 attattgattttgacaagtaagtacaagttatgattatgtagatatttgagaatgatta 17870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 562 - 595
Target Start/End: Complemental strand, 17829 - 17796
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatc 595  Q
    ||||||||||||||||||||||||||||||||||    
T  17829 agaaaaagcacaaaataaaaacaaagtcgggatc 17796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 119; Significance: 2e-60; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 302 - 523
Target Start/End: Original strand, 21707 - 21932
Alignment:
Q  302 ttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttca--ttcat-ttcttcagcttcggatac 398  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| |||||||  ||| | ||||||||||||||||||    
T  21707 ttcatgatttttgtttgtagctttgacggctatgatgccccagcatgtgagagatctcatcgggagcctcttcactttcctcttcttcagcttcggatac 21806  T
Q  399 aaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatg 497  Q
    ||||||||||||||||| ||||||||||||||   ||||||||| | ||||||||||||||||||| ||| |||| |||||| ||||| |  ||||||||    
T  21807 aaggaactcaaagttggtagagagtacatggttgttgtgttcaaagggtttattaatgcatgatttgattattgattttgacaagtaagtacaagttatg 21906  T
Q  498 attatgcagacatttgacaataatta 523  Q
    |||||||||| |||||| ||| ||||    
T  21907 attatgcagatatttgagaatgatta 21932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 21971 - 22028
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| ||||||||| | |||||||||||||||||||||||||||||||||| ||||||    
T  21971 agaagaagcacaaagtgaaaacaaagtcgggatcaaaacgacctttttattaatgatg 22028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 118; Significance: 7e-60; HSPs: 2)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 269 - 526
Target Start/End: Complemental strand, 9656 - 9402
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||| ||||||||| ||||| ||||||||||||||||| | ||| |||| |||||||||||| ||| ||||||||| ||||| |  |     
T  9656 tctttgtaagcgattgtcatcttctgaactatcttcatgatttttgtttgcaacttggacgactatgatgccccggtatgtgagagatatcatcggttgc 9557  T
Q  369 ctcttcattcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattta-tt 467  Q
    ||||||| |   |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  9556 ctcttcactttcttcttctgcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgtgtttattaatgcatgatttattt 9457  T
Q  468 gttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataattatta 526  Q
     |||| |||||| ||||     || ||||||||||||||| |||||| ||| |||||||    
T  9456 attgattttgacaagta----caatttatgattatgcagatatttgaaaatgattatta 9402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 9370 - 9313
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| ||||||||| | |||||||||||||||||||||||||||||||||| ||||||    
T  9370 agaagaagcacaaagtgaaaacaaagtcgggatcaaaacgacctttttattaatgatg 9313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 116; Significance: 1e-58; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 269 - 523
Target Start/End: Original strand, 191127 - 191382
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||||||| ||||||||||||| ||||||||||||||||| | ||| ||||||||||||||||| ||| ||||||||||||||| || |     
T  191127 tctttgtaagcgattgccgtcttctggactatcttcatgatttttgtttgaaacttggacggctatgatgccccggtatgtgagagatctcatcgggtgc 191226  T
Q  369 ctcttcattcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-att 467  Q
    ||||||| |    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||||||||||| |||    
T  191227 ctcttcactttcctcttctgcttcggatacaaggaactcaaagttggaagagagtacatggttaatgtgttcaacgggtttatcgatgcatgatttgatt 191326  T
Q  468 gttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
     |||| |||||| ||||| |  |  ||||||||||||| | |||||| ||| ||||    
T  191327 attgattttgacaagtaagtatagattatgattatgcatatatttgagaatgatta 191382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 191426 - 191483
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  191426 agaaaaagcacaaaataaaaacaaagtcggggtcaaaacgacctttttattaatgatg 191483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1661 (Bit Score: 113; Significance: 7e-57; HSPs: 1)
Name: scaffold1661
Description:

Target: scaffold1661; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 269 - 472
Target Start/End: Complemental strand, 730 - 523
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||| | ||||||||||||| | ||||    
T  730 tctttgtaagcgattgcaatcttctggactattttcatgatttttgtttgtagctttgacggcttatgatacctcagcatgtgagagatctcaccgggag 631  T
Q  368 tctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     |||||||  ||| | ||| ||||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||| |||||||||||||||||||    
T  630 cctcttcactttcctcttcctcagcttcggatacaaggaactcaaagttggtagagagtacatggttgttgtgttcaacgggtttattaatgcatgattt 531  T
Q  465 attgttga 472  Q
    ||| ||||    
T  530 attattga 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 113; Significance: 7e-57; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 269 - 472
Target Start/End: Complemental strand, 89220 - 89013
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||| | ||||||||||||| | ||||    
T  89220 tctttgtaagcgattgcaatcttctggactattttcatgatttttgtttgtagctttgacggcttatgatacctcagcatgtgagagatctcaccgggag 89121  T
Q  368 tctcttca--ttcat-ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     |||||||  ||| | ||| ||||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||| |||||||||||||||||||    
T  89120 cctcttcactttcctcttcctcagcttcggatacaaggaactcaaagttggtagagagtacatggttgttgtgttcaacgggtttattaatgcatgattt 89021  T
Q  465 attgttga 472  Q
    ||| ||||    
T  89020 attattga 89013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 75535 - 75486
Alignment:
Q  564 aaaaagcacaaaat-aaaaacaaagtcgggatcaaaacgacctttttatt 612  Q
    ||||| |||||||| ||||||||||| |||||||||||||||||||||||    
T  75535 aaaaaacacaaaatgaaaaacaaagttgggatcaaaacgacctttttatt 75486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 526
Target Start/End: Complemental strand, 75621 - 75576
Alignment:
Q  481 agtaaatgaaagttatgattatgcagacatttgacaataattatta 526  Q
    |||||| ||||||||||||||||||||||||| | ||| |||||||    
T  75621 agtaaacgaaagttatgattatgcagacatttaagaatgattatta 75576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 108; Significance: 6e-54; HSPs: 2)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 269 - 514
Target Start/End: Original strand, 475 - 721
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggct-atgatgccccagtaagtgagagatctcatcaggag 367  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| || ||||    
T  475 tctttgtaagcgattaccatcttctggactatcttcatgatttttgtttgtagctttgacggcttatgatgccccagtatgtgagagatctcgtcgggag 574  T
Q  368 tctcttcatt---catttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     |||||||||   |  ||||||| ||||||| |||  ||||||||||||||||||||||||||||| | |||||| || | ||||||||||||||| |||    
T  575 cctcttcattttcctcttcttcatcttcggacacagagaactcaaagttggaagagagtacatggttattgtgtttaatgggtttattaatgcatgcttt 674  T
Q  465 -attgttgactttgacgagtaaatgaaagttatgattatgcagacatttga 514  Q
     ||| |||| |||||| ||||     |||||||||||||||||| ||||||    
T  675 gattattgattttgacaagta----caagttatgattatgcagatatttga 721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 568 - 619
Target Start/End: Original strand, 775 - 827
Alignment:
Q  568 agcacaaaataaaa-acaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  775 agcacaaaataaaaaacaaagtcgggatcaaaacgacctttttattaatgatg 827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 286 - 526
Target Start/End: Original strand, 4135 - 4381
Alignment:
Q  286 catcttctggactattttcatgat--ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttca--ttcatt 381  Q
    |||||||||||| || ||| ||||  ||||||| | ||| | ||||| || |||||||||| | | ||||||||| |||  |||||||||||  ||| |     
T  4135 catcttctggacaatattcttgatatttttgttcgcagcctcgacgggtaagatgccccagcatgcgagagatcttatcgagagtctcttcactttcctc 4234  T
Q  382 -tcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgac 479  Q
     |||||| ||||||| | |  ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| ||| |||| ||||||    
T  4235 atcttcatcttcggacatagagaactcaaagttggaagagagtacatggttattgtgttcaacgggtttattaatgcatgatttgattattgattttgac 4334  T
Q  480 gagtaaatgaaagttatgattatgcagacatttgacaataattatta 526  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||    
T  4335 gagtaaatgaaagttatgattatgcagatatttgaaaatgattatta 4381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 4413 - 4469
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||| ||||||    
T  4413 agaaaaagcacaaaataaaaacaaagtcgggatcgaatcga-ctttttattaatgatg 4469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 84; Significance: 1e-39; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 524
Target Start/End: Original strand, 183079 - 183300
Alignment:
Q  308 atttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattca---tttctt-cagcttcggatacaagga 403  Q
    ||||||||||| ||||| ||| |||  |||||||||||| | ||||||||||||| ||||||||||||||     |||||| || |||| || | | |||    
T  183079 atttttgtttgcagcttcgacagctgagatgccccagtatgcgagagatctcatcgggagtctcttcatttcctttttctttcatcttcagacataggga 183178  T
Q  404 actcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattat 502  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| |||| |||||| ||||  |  |||||||||||||    
T  183179 actcaaagttggaagagagtacatggttactgtgttcaacgagtttattaatgcatgatttgattattgattttgacaagtatgtataagttatgattat 183278  T
Q  503 gcagacatttgacaataattat 524  Q
    ||||| |||||| ||| |||||    
T  183279 gcagatatttgaaaatgattat 183300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 269 - 523
Target Start/End: Complemental strand, 1171 - 913
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagt 368  Q
    ||||| |||||||| |||||||||||||||||  |||||||| ||||||| | |||||||||| | |||||||||| | ||||||||||||||  | ||     
T  1171 tctttgtaagcgatcgccatcttctggactatcctcatgattcttgtttgcaactttgacggcgaagatgccccagcatgtgagagatctcattggaagc 1072  T
Q  369 ctcttca---ttcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt- 464  Q
    |||||||   | | |||| ||| ||||||| ||| ||| ||||| ||||| ||||| | |||||| | ||||||||| | | |||||||||||||||||     
T  1071 ctcttcaatttccttttcctcatcttcggacacagggatctcaacgttgggagagaatgcatggttattgtgttcaatgggcttattaatgcatgatttg 972  T
Q  465 attgttgactttgacgagtaaatgaaagttatgattatgcagacatttgacaataatta 523  Q
    ||| |||| |||||| ||||| |  |||||||||||||||||| |||||| ||| ||||    
T  971 attattgattttgacaagtaagtacaagttatgattatgcagatatttgagaatgatta 913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 873 - 816
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||||||| ||||||    
T  873 agaaaaagcacaaaatgaaaacaaaattgggatcaaaacgacctttttattaatgatg 816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 364 - 514
Target Start/End: Original strand, 24260 - 24411
Alignment:
Q  364 ggagtctcttcattcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgatt 463  Q
    ||||||||||| |||  |||||| |||||||||||||||||||||||||||||||||| | |||||| ||||||||||||| ||||||||||||||||||    
T  24260 ggagtctcttccttctcttcttcggcttcggatacaaggaactcaaagttggaagagatttcatggttaatgtgttcaacgggtttattaatgcatgatt 24359  T
Q  464 t-attgttgactttgacgagtaaatgaaagttatgattatgcagacatttga 514  Q
    | ||| |||| ||||||  |||| |  |||||||||||||||||| ||||||    
T  24360 tgattattgattttgacatgtaagtacaagttatgattatgcagatatttga 24411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 24458 - 24517
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  24458 ccagaaaaagcacaaaatgaaaacaaagtcgggatcaaaacgacctttttattaatgatg 24517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 66; Significance: 7e-29; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 310 - 505
Target Start/End: Complemental strand, 18822 - 18623
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcat---ttcttcagcttcggatacaaggaact 406  Q
    ||||||||| |||||||||||||| |||||||||||  | |||||||||     |||||||||||||||     ||||||| ||||||  |||  |||||    
T  18822 ttttgtttgcagctttgacggctaagatgccccagtgggcgagagatcttgctgggagtctcttcattctcctcttcttcatcttcggtcacagagaact 18723  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgca 505  Q
    ||||||||| ||||||||||| || | | ||||||||||||||||||||||||||||| ||| |||| |||||| ||||| |  ||||||||||||||||    
T  18722 caaagttgggagagagtacatagttattatgttcaacgagtttattaatgcatgatttgattattgattttgacaagtaagtacaagttatgattatgca 18623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 561 - 619
Target Start/End: Complemental strand, 18569 - 18512
Alignment:
Q  561 cagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||||| ||||||    
T  18569 cagaaaaagcacaaaataaaat-aaagtcggaatcaaaacgacctttttattaatgatg 18512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 308 - 507
Target Start/End: Complemental strand, 12853 - 12665
Alignment:
Q  308 atttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatttcttcagcttcggatacaaggaactc 407  Q
    |||||||||||||| || |||||||| |||||||||||| ||| ||||| ||||| |||||| ||||||            ||||  | | | |||||||    
T  12853 atttttgtttgtagattcgacggctaagatgccccagtatgtgggagatttcatcgggagtcccttcat------------cttcatacatagggaactc 12766  T
Q  408 aaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgcag 506  Q
    |||||||||||||||| |||||| | ||||||||| | ||||||||||||||||||| ||| |||| |||||||||||| |  |||||||||||||||||    
T  12765 aaagttggaagagagtccatggttattgtgttcaaagggtttattaatgcatgatttgattattgattttgacgagtaagtataagttatgattatgcag 12666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 380 - 526
Target Start/End: Complemental strand, 302532 - 302385
Alignment:
Q  380 tttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttga 478  Q
    |||||||| | |||||  || |||||||||||| |  ||||||||||| || | ||||||||||| ||||||||||||||||||| ||| |||| |||||    
T  302532 tttcttcaacctcggacgcatggaactcaaagtcgagagagagtacatagttattgtgttcaacgggtttattaatgcatgatttgattattgattttga 302433  T
Q  479 cgagtaaatgaaagttatgattatgcagacatttgacaataattatta 526  Q
    || |||| |  ||||||||||||||||| ||||||| ||| |||||||    
T  302432 cgggtaagtataagttatgattatgcaggcatttgaaaatgattatta 302385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 385 - 464
Target Start/End: Complemental strand, 3838 - 3759
Alignment:
Q  385 tcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||| |||||||||||||||||||||| |  ||||||||||| || || ||||||||||||||||||||||||||||||    
T  3838 tcagcctcggatacaaggaactcaaagtcgagagagagtacatcgttaaagtgttcaacgagtttattaatgcatgattt 3759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 310 - 514
Target Start/End: Complemental strand, 32923 - 32723
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcagg-agtctcttcattcatttcttcagcttcggatacaaggaactca 408  Q
    ||||||| | |||||||||||||| |||||||||||   |||||||||| ||| || |||||||||| |   ||| ||  |||| |   |||||||||||    
T  32923 ttttgttcgcagctttgacggctaagatgccccagtggatgagagatcttatcggggagtctcttcact---ttcctcttcttcag---caaggaactca 32830  T
Q  409 aagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgcaga 507  Q
    ||||||| |||||||||||||| | ||||||||| | ||||||||||||||||||| ||   ||| ||| || ||||| |  ||||||||||||||||||    
T  32829 aagttggtagagagtacatggttattgtgttcaaggggtttattaatgcatgatttgatcaatgatttttacaagtaagtacaagttatgattatgcaga 32730  T
Q  508 catttga 514  Q
     ||||||    
T  32729 tatttga 32723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 564 - 619
Target Start/End: Complemental strand, 32674 - 32618
Alignment:
Q  564 aaaaagcacaaaataaaaa-caaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  32674 aaaaagcacaaaataaaaaacaaagtcgggatcaaaacgacctttttattaatgatg 32618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 269 - 464
Target Start/End: Original strand, 8205 - 8401
Alignment:
Q  269 tctttataagcgattgccatcttctggactattttcatgatttttgt--ttgtagctttgacggctatgatgccccagtaagtgagagatctcatcagga 366  Q
    |||||||||| || ||||||||||||| | || ||  |||| |||||  |||||||||| ||  ||| |||||||||||| | ||  | ||||||  |||    
T  8205 tctttataagtgaatgccatcttctggccaatcttt-tgatatttgtaattgtagctttaacaactaagatgccccagtaggcgaatggtctcattggga 8303  T
Q  367 gtctcttcattcatttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
     ||||||||| |  |||||||| |||||| ||| ||||||||||||||  |||||||||| ||| || |||||||||| ||||||| |||||||||||    
T  8304 atctcttcatcctcttcttcagtttcggacacagggaactcaaagttgagagagagtacagggttaaagtgttcaacgggtttatttatgcatgattt 8401  T

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Target: scaffold0157; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 315 - 513
Target Start/End: Complemental strand, 11435 - 11231
Alignment:
Q  315 tttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcat--tcat-ttcttcagcttcggatacaaggaactcaaag 411  Q
    |||| |||||||||||||| ||||||||| || | ||  ||||||||  ||| |||||||||  || | ||||| |  |||||| ||| |||||||||||    
T  11435 tttgcagctttgacggctaagatgccccaataggcgaatgatctcattgggaatctcttcatcctcctcttcttaaatttcggacacagggaactcaaag 11336  T
Q  412 ttggaagagagtacatggtaaatgtgttcaac--gagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgcagac 508  Q
    |||  |||||||||| |||  | |||||||||  | ||||||||||||||||||| ||| |||| | |||| ||||||| ||||||||||| ||||| ||    
T  11335 ttgagagagagtacagggttgaagtgttcaacgggggtttattaatgcatgatttgattattgattctgacaagtaaataaaagttatgatcatgcaaac 11236  T
Q  509 atttg 513  Q
    |||||    
T  11235 atttg 11231  T

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Target: scaffold0320 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 310 - 464
Target Start/End: Original strand, 3215 - 3372
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcat---ttcttcagcttcggatacaaggaact 406  Q
    ||||||| | |||| ||||||||| |||||||||||  | |||||||||     |||||||||||||||     ||||||| ||||||  |||  |||||    
T  3215 ttttgttcgcagctatgacggctaagatgccccagtgggcgagagatcttgctgggagtctcttcattctcctcttcttcatcttcggtcacagagaact 3314  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| |||||||||||| | | ||||||||||| |||||||||||||||||||    
T  3315 caaagttgggagagagtacatgattattgtgttcaacgggtttattaatgcatgattt 3372  T

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Target: scaffold0320; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 561 - 619
Target Start/End: Original strand, 3471 - 3528
Alignment:
Q  561 cagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||||||| ||||||    
T  3471 cagaaaaagcacaaaataaaat-aaagttgggatcaaaacgacctttttattaatgatg 3528  T

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Target: scaffold0132 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 310 - 507
Target Start/End: Complemental strand, 32468 - 32267
Alignment:
Q  310 ttttgtttgtagctttgacggctatgatgccccagtaagtgagagatctcatcaggagtctcttcattcatttcttc---agcttcggatacaaggaact 406  Q
    ||||||||| ||||||||||| || ||||||| |||  | |||||||||     |||||||||||||||   |||||   | ||||||  |||  |||||    
T  32468 ttttgtttgcagctttgacggttaagatgccctagtgggcgagagatcttgctgggagtctcttcattctcctcttccatatcttcggtcacagagaact 32369  T
Q  407 caaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgca 505  Q
    ||||||||| | ||||||||| || | | ||||||||| ||||||||||||||| ||| ||| |||| |||||| ||||| |  ||||||||||||||||    
T  32368 caaagttgggaaagagtacatagttattatgttcaacgggtttattaatgcatgctttgattattgattttgacaagtaagtacaagttatgattatgca 32269  T
Q  506 ga 507  Q
    ||    
T  32268 ga 32267  T

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Target: scaffold0132; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 563 - 612
Target Start/End: Complemental strand, 32214 - 32166
Alignment:
Q  563 gaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttatt 612  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  32214 gaaaaagcacaaaataaaat-aaagtcgggatcaaaacggcctttttatt 32166  T

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Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 327 - 444
Target Start/End: Complemental strand, 154546 - 154425
Alignment:
Q  327 acggctatgatgccccagtaagtgagagatctcatcaggagtctcttcat--tcatttc-ttcagcttcggatacaaggaactcaaa-gttggaagagag 422  Q
    ||||||| ||||||| |||| | ||||||||||||| |||  ||||||||  || | || ||||| |||||| ||| |||||||||| ||||||||||||    
T  154546 acggctaagatgcccaagtaggcgagagatctcatcgggaacctcttcatcctcctctccttcagtttcggacacatggaactcaaaagttggaagagag 154447  T
Q  423 tacatggtaaatgtgttcaacg 444  Q
    |||||||| |||||||||||||    
T  154446 tacatggttaatgtgttcaacg 154425  T

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Target: scaffold0015 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 166070 - 166013
Alignment:
Q  562 agaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||    
T  166070 agaaaaagcacaaaataaaaacaaagtcgggatcaaagcgactttttaattaatgatg 166013  T

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Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 384 - 464
Target Start/End: Original strand, 59538 - 59618
Alignment:
Q  384 ttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||| || ||||||||||||||||||| |  |||||||||| |||  | |||||||||| |||||||||||||||||||    
T  59538 ttcagcctcagatacaaggaactcaaagtcgagagagagtacaaggtttaagtgttcaacgggtttattaatgcatgattt 59618  T

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Target: scaffold0027; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 560 - 607
Target Start/End: Original strand, 59705 - 59752
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  59705 ccagaaaaagcacaaaataaaaacaaggtcgggatcaagacgaccttt 59752  T

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Target: scaffold0083 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 19665 - 19582
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||| | ||||||||| |||||||||||| |  |||||||||| |||  | |||||||||| |||||||||||||||||||    
T  19665 ttcttcaacctcggatacacggaactcaaagtcgagagagagtacagggtttaagtgttcaacgggtttattaatgcatgattt 19582  T

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Target: scaffold0044 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 70570 - 70653
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| || ||||||||||||||||||| |   ||||||||| |||  | |||||||||| |||||||||||||||||||    
T  70570 ttcttcagcctcagatacaaggaactcaaagtcgagcgagagtacagggtttaagtgttcaacgggtttattaatgcatgattt 70653  T

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Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 28515 - 28573
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttattgatgatg 619  Q
    |||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||    
T  28515 ccaggaaaagcacaaaataaaaacaaagtcgggatcaaaatga-ctttttattaatgatg 28573  T

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Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 19579 - 19532
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||    
T  19579 ccagaaaaagcacaaaataaaaacaaagtcgggatcgagacgaccttt 19532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 19721 - 19651
Alignment:
Q  394 gatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||||||||||||| || |  |||||||||| ||| || |||||||||| |||||||||||||||||||    
T  19721 gatacaaggaactcaaggtcgagagagagtacaaggttaaagtgttcaacgggtttattaatgcatgattt 19651  T

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Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 565 - 612
Target Start/End: Complemental strand, 99836 - 99789
Alignment:
Q  565 aaaagcacaaaataaaaacaaagtcgggatcaaaacgacctttttatt 612  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  99836 aaaagcacaaaatgaaaacaaagtcgggttcaaaacgacctttttatt 99789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 436 - 514
Target Start/End: Complemental strand, 99968 - 99889
Alignment:
Q  436 tgttcaacgagtttattaatgcatgattt-attgttgactttgacgagtaaatgaaagttatgattatgcagacatttga 514  Q
    ||||||||| |||||| |||||||||||| ||| |||| |||||| ||||| |  |||||||||||||||||| ||||||    
T  99968 tgttcaacgggtttatcaatgcatgatttgattattgattttgacaagtaagtacaagttatgattatgcagatatttga 99889  T

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Target: scaffold0023 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 142380 - 142453
Alignment:
Q  391 tcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||| ||||| ||||||||||| |  ||||||||||||||  | |||||||||| |||||||||||||||||||    
T  142380 tcgggtacaaagaactcaaagtcgagagagagtacatggtttaagtgttcaacgggtttattaatgcatgattt 142453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 4736 - 4819
Alignment:
Q  381 ttcttcagcttcggatacaaggaactcaaagttggaagagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    ||||||||| | ||||| |||||||||||||| |  |||||||||  |||  | |||||||||| |||||||||||||||||||    
T  4736 ttcttcagccttggatataaggaactcaaagtcgagagagagtaccaggtttaagtgttcaacgggtttattaatgcatgattt 4819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 560 - 607
Target Start/End: Original strand, 4906 - 4952
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  4906 ccagaaaaagcacaaaat-aaaacaaggtcgggatcaagacgaccttt 4952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 560 - 607
Target Start/End: Complemental strand, 125677 - 125630
Alignment:
Q  560 ccagaaaaagcacaaaataaaaacaaagtcgggatcaaaacgaccttt 607  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||    
T  125677 ccagaaaaagcacaaaataaaaacaaggtcgggatcaagtcgaccttt 125630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 125812 - 125765
Alignment:
Q  417 agagagtacatggtaaatgtgttcaacgagtttattaatgcatgattt 464  Q
    |||||||||| ||| || |||||||||| |||||||||||||||||||    
T  125812 agagagtacagggttaaagtgttcaacgggtttattaatgcatgattt 125765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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