View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19934_high_27 (Length: 340)
Name: NF19934_high_27
Description: NF19934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19934_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 9 - 324
Target Start/End: Complemental strand, 6706070 - 6705755
Alignment:
| Q |
9 |
agcataggtaatacggccgtgaccacaaccacgaaacatggtcgtgatcataaccagactccaacaagcagttcaggcttgttggagcttgagttgttac |
108 |
Q |
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| T |
6706070 |
agcataggtaatacggccgtgaccacaaccacgaaacatggtcgtgatcataaccagactccaacaagcagttcaggcttgctggagcttgagttgttac |
6705971 |
T |
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| Q |
109 |
caacaaattgggctgcttcgcggcccaatttggagcaaccatcgaccagaggttgctcaaattttaattcttctttgtttttcgaacaaacgacatcttc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
6705970 |
caacaaattgggctgcttcgcggcccaatttggagcaaccatcgaccagaggttgctcaaattttaattcttctttgttttttgaacaaacgacatcttc |
6705871 |
T |
|
| Q |
209 |
ctcatcttcttcgtccttgtccatatctatgtcaatgccaagtggtccaacctatggtcatcaacaacaacatcaacatctagtaccacataactgggca |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6705870 |
ctcatcttcttcgtccttgtccatatctatgtcaatgccaagtggtccaacctatggtcatcaacaacaacatcaacatctagtaccacataactgggca |
6705771 |
T |
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| Q |
309 |
tttggtccattattac |
324 |
Q |
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|||||||||||||||| |
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| T |
6705770 |
tttggtccattattac |
6705755 |
T |
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