View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19934_high_40 (Length: 250)
Name: NF19934_high_40
Description: NF19934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19934_high_40 |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 25506814 - 25506574
Alignment:
| Q |
1 |
ctttaactatgctgctagctaagaaactacaaagatgcatgaatggttaaaaccacatttgacatgataattgaaaagtactttcaaaagggtattttat |
100 |
Q |
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| T |
25506814 |
ctttaactatgctgctagctaagaaactacaaagatgcatgaatggttaaaaccacatttgacatgataattgaaaagtactttcaaaagggtattttat |
25506715 |
T |
|
| Q |
101 |
acacacaaaagctcactctataagtaacaaaaaagtgcnnnnnnnaaagtcaacttactattaaaggaaacagaacaaggtgacaaatttggtcgtgttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25506714 |
acacacaaaagctcactctataagtaacaaaaaagtgctttttttaaagtcaacttactattaaaggaaacagaacaaggtgacaaatttggtcgtgttt |
25506615 |
T |
|
| Q |
201 |
gaagtgaagaggttcttgtaattgagggtgacaatattgtt |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
25506614 |
gaagtgaagaggttcttgtaattgagggtgacaatattgtt |
25506574 |
T |
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