View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19934_high_43 (Length: 246)
Name: NF19934_high_43
Description: NF19934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19934_high_43 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 33992315 - 33992538
Alignment:
| Q |
1 |
ggagaacatcacgaacataagtgtaagcatatattttatgtcattcatcagtccagtttatttttacatgtatattaatcaaggtttaaatgaggtctcc |
100 |
Q |
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| T |
33992315 |
ggagaacatcacgaacataagtgtaagcatatattttatgtcattcatcagtccagtttttttttacatgtatattaatcaaggtttaaatgaggtctcc |
33992414 |
T |
|
| Q |
101 |
tattttcaatagtttaattatttatatttatatttatatgacatatagtgcaacatatgattacatttcatgaaaaatatttaaacaacttgcagctcca |
200 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33992415 |
tattttcaatagtttaat------tatttatatttatatgacatatagtgcaacatatgattacatttcatgaaaaatatttaaacaacttgcagctcca |
33992508 |
T |
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| Q |
201 |
tagtagaagaagtggaaatgggatcagaag |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
33992509 |
tagtagaagaagtggaaatgggatcagaag |
33992538 |
T |
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