View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19934_low_48 (Length: 233)
Name: NF19934_low_48
Description: NF19934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19934_low_48 |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 46813819 - 46814036
Alignment:
| Q |
1 |
tttcatttctttttcaaattatgtaagactttgctttgttgtttgttggaaattttatgtatgctttcctccttcccgattatttcttgtgcactatggc |
100 |
Q |
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| T |
46813819 |
tttcatttctttttcaaattatgtaaaactttgctttgttgtttgttggaaattttatgtatgctttcctccttcccgattatttcttgtgcactatggc |
46813918 |
T |
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| Q |
101 |
aagtatatatacatgtgtatgtgaggctcgtgagccacaaataatgtcaatgtacgttgctaaattattggcttcttctttgcctgtctatttttaatca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46813919 |
aagtatatatacatgtgtatgtgaggctcgtgagccacaaataatgtcaatgtacgttgctaaattattggcttcttctttgcctgtctatttttaatca |
46814018 |
T |
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| Q |
201 |
cttaaaaatagaatgaat |
218 |
Q |
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|||||||||||||||||| |
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| T |
46814019 |
cttaaaaatagaatgaat |
46814036 |
T |
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