View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1993_low_2 (Length: 546)

Name: NF1993_low_2
Description: NF1993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1993_low_2
NF1993_low_2
[»] chr5 (29 HSPs)
chr5 (18-409)||(27244541-27244932)
chr5 (470-540)||(27244410-27244480)
chr5 (339-388)||(21657388-21657437)
chr5 (325-395)||(23118034-23118104)
chr5 (325-364)||(27651544-27651583)
chr5 (325-363)||(4432124-4432162)
chr5 (332-394)||(7216819-7216881)
chr5 (325-379)||(29695023-29695077)
chr5 (325-375)||(40445991-40446041)
chr5 (325-381)||(689555-689611)
chr5 (336-388)||(3052200-3052252)
chr5 (332-388)||(41630102-41630158)
chr5 (330-389)||(42168934-42168993)
chr5 (325-363)||(7070925-7070963)
chr5 (325-363)||(8545004-8545042)
chr5 (341-379)||(31602824-31602862)
chr5 (330-364)||(42964522-42964556)
chr5 (336-385)||(2951361-2951409)
chr5 (330-387)||(5846042-5846099)
chr5 (325-366)||(11647205-11647246)
chr5 (325-394)||(22498950-22499018)
chr5 (339-368)||(42854330-42854359)
chr5 (330-394)||(6489020-6489084)
chr5 (327-363)||(7861016-7861052)
chr5 (327-363)||(9595562-9595598)
chr5 (340-388)||(11823512-11823559)
chr5 (336-376)||(29904440-29904480)
chr5 (330-366)||(36321506-36321542)
chr5 (330-378)||(39143727-39143775)
[»] chr4 (46 HSPs)
chr4 (330-376)||(46434762-46434808)
chr4 (325-374)||(39842016-39842065)
chr4 (327-394)||(9783909-9783976)
chr4 (336-388)||(1657020-1657072)
chr4 (336-388)||(29568605-29568657)
chr4 (332-376)||(54677240-54677284)
chr4 (325-385)||(56096212-56096272)
chr4 (325-394)||(11269702-11269771)
chr4 (325-394)||(34595920-34595989)
chr4 (325-394)||(43034326-43034395)
chr4 (331-364)||(50650941-50650974)
chr4 (332-380)||(16703031-16703079)
chr4 (336-368)||(21465630-21465662)
chr4 (330-394)||(28435232-28435296)
chr4 (325-364)||(874467-874506)
chr4 (341-380)||(3299092-3299131)
chr4 (341-376)||(12192493-12192528)
chr4 (338-377)||(37735810-37735849)
chr4 (329-364)||(47016630-47016665)
chr4 (325-372)||(54587908-54587955)
chr4 (325-363)||(6459939-6459977)
chr4 (330-364)||(12439677-12439711)
chr4 (330-388)||(17216119-17216177)
chr4 (330-364)||(36071157-36071191)
chr4 (330-364)||(42756120-42756154)
chr4 (336-366)||(45029617-45029647)
chr4 (330-388)||(56551582-56551640)
chr4 (330-379)||(10564464-10564513)
chr4 (327-388)||(11166696-11166757)
chr4 (340-377)||(11286782-11286819)
chr4 (330-375)||(12263265-12263310)
chr4 (330-363)||(29808283-29808316)
chr4 (330-363)||(36203249-36203282)
chr4 (339-375)||(8734872-8734908)
chr4 (325-357)||(9196221-9196253)
chr4 (330-394)||(11144649-11144713)
chr4 (327-379)||(13121554-13121606)
chr4 (330-378)||(22040663-22040711)
chr4 (327-379)||(22164268-22164320)
chr4 (330-394)||(22411777-22411841)
chr4 (336-388)||(25978336-25978388)
chr4 (332-388)||(26004647-26004702)
chr4 (341-381)||(32923200-32923240)
chr4 (339-379)||(36479013-36479053)
chr4 (330-394)||(46676482-46676546)
chr4 (343-387)||(49716930-49716974)
[»] chr1 (41 HSPs)
chr1 (325-379)||(10841908-10841962)
chr1 (325-376)||(22388177-22388228)
chr1 (330-388)||(41974774-41974832)
chr1 (327-376)||(16967196-16967245)
chr1 (330-379)||(17917137-17917186)
chr1 (339-388)||(33020033-33020082)
chr1 (327-388)||(33175271-33175332)
chr1 (330-375)||(35632912-35632957)
chr1 (325-365)||(3248785-3248825)
chr1 (325-397)||(9398394-9398466)
chr1 (330-394)||(9872089-9872153)
chr1 (330-394)||(19262891-19262955)
chr1 (325-361)||(29701337-29701373)
chr1 (336-388)||(34083356-34083408)
chr1 (325-388)||(6000133-6000196)
chr1 (327-366)||(19533190-19533229)
chr1 (325-364)||(30548105-30548144)
chr1 (325-360)||(31962455-31962490)
chr1 (325-388)||(33153870-33153933)
chr1 (325-364)||(43843899-43843938)
chr1 (341-395)||(3157700-3157754)
chr1 (337-379)||(22335378-22335420)
chr1 (325-363)||(23405373-23405411)
chr1 (330-388)||(45190259-45190317)
chr1 (325-379)||(46334783-46334837)
chr1 (330-363)||(2817388-2817421)
chr1 (330-379)||(3693795-3693844)
chr1 (340-377)||(4806796-4806833)
chr1 (341-386)||(7996681-7996726)
chr1 (325-362)||(10292944-10292981)
chr1 (330-379)||(13401610-13401659)
chr1 (334-387)||(29798107-29798160)
chr1 (330-363)||(41926835-41926868)
chr1 (336-377)||(42860126-42860167)
chr1 (338-379)||(43356456-43356497)
chr1 (340-388)||(18101609-18101657)
chr1 (330-394)||(21041357-21041421)
chr1 (327-363)||(30937485-30937521)
chr1 (330-366)||(42416816-42416852)
chr1 (330-394)||(47528431-47528495)
chr1 (325-377)||(49868019-49868071)
[»] chr2 (55 HSPs)
chr2 (325-377)||(40967372-40967424)
chr2 (325-378)||(3904210-3904263)
chr2 (330-379)||(5028869-5028918)
chr2 (331-388)||(12413507-12413564)
chr2 (331-388)||(12425567-12425624)
chr2 (336-389)||(19156153-19156206)
chr2 (327-376)||(41939110-41939159)
chr2 (331-394)||(33832653-33832716)
chr2 (330-381)||(43117187-43117238)
chr2 (325-379)||(9547408-9547462)
chr2 (330-392)||(10332261-10332323)
chr2 (330-388)||(24393258-24393316)
chr2 (338-388)||(32407553-32407603)
chr2 (330-375)||(3196573-3196618)
chr2 (330-363)||(44868432-44868465)
chr2 (336-388)||(7640677-7640729)
chr2 (325-361)||(17842729-17842765)
chr2 (340-384)||(22608550-22608594)
chr2 (341-381)||(27889313-27889353)
chr2 (336-376)||(42451452-42451492)
chr2 (340-379)||(12126892-12126931)
chr2 (341-388)||(18611953-18612000)
chr2 (330-385)||(44926394-44926449)
chr2 (330-364)||(2429029-2429063)
chr2 (325-363)||(16204832-16204870)
chr2 (330-388)||(20120711-20120769)
chr2 (325-379)||(22267521-22267574)
chr2 (330-388)||(25186232-25186290)
chr2 (330-388)||(28163940-28163998)
chr2 (330-380)||(28202310-28202360)
chr2 (330-376)||(30263275-30263321)
chr2 (341-394)||(30799074-30799125)
chr2 (340-394)||(31048300-31048354)
chr2 (330-388)||(34903530-34903588)
chr2 (333-379)||(42181302-42181348)
chr2 (330-364)||(44488024-44488058)
chr2 (336-389)||(2264816-2264869)
chr2 (325-378)||(4897551-4897604)
chr2 (325-378)||(4944945-4944998)
chr2 (330-363)||(5980240-5980273)
chr2 (330-375)||(25603914-25603959)
chr2 (330-363)||(39761451-39761484)
chr2 (339-379)||(3897996-3898036)
chr2 (336-376)||(9391766-9391806)
chr2 (325-357)||(9982633-9982665)
chr2 (340-384)||(13528652-13528696)
chr2 (340-388)||(15333152-15333200)
chr2 (330-366)||(18231485-18231521)
chr2 (330-394)||(20517035-20517099)
chr2 (336-388)||(22520236-22520288)
chr2 (330-394)||(24592830-24592894)
chr2 (339-379)||(31148648-31148688)
chr2 (336-368)||(39384172-39384204)
chr2 (336-364)||(39770540-39770568)
chr2 (330-394)||(40546329-40546393)
[»] chr8 (30 HSPs)
chr8 (325-395)||(29924900-29924970)
chr8 (336-389)||(27044879-27044932)
chr8 (325-389)||(3102316-3102380)
chr8 (330-394)||(5880968-5881031)
chr8 (336-388)||(8720031-8720083)
chr8 (325-379)||(30071515-30071569)
chr8 (325-378)||(13272522-13272575)
chr8 (341-389)||(1230650-1230698)
chr8 (325-361)||(20284926-20284962)
chr8 (325-361)||(21071555-21071591)
chr8 (325-380)||(13284263-13284318)
chr8 (330-377)||(17704026-17704073)
chr8 (341-380)||(18422451-18422490)
chr8 (327-394)||(19260563-19260630)
chr8 (330-377)||(26991758-26991805)
chr8 (341-388)||(33445594-33445641)
chr8 (325-363)||(19701359-19701397)
chr8 (331-368)||(38535083-38535121)
chr8 (330-363)||(6038290-6038323)
chr8 (339-380)||(7433162-7433203)
chr8 (325-374)||(8442491-8442540)
chr8 (330-379)||(28439972-28440021)
chr8 (330-363)||(30874733-30874766)
chr8 (334-379)||(32944942-32944987)
chr8 (335-379)||(6099979-6100023)
chr8 (328-360)||(14897607-14897639)
chr8 (336-388)||(20275179-20275231)
chr8 (336-388)||(21061806-21061858)
chr8 (330-378)||(24696006-24696054)
chr8 (349-377)||(42688815-42688843)
[»] chr7 (40 HSPs)
chr7 (325-379)||(3584212-3584266)
chr7 (332-372)||(40854936-40854976)
chr7 (330-372)||(43982087-43982129)
chr7 (325-394)||(6384859-6384928)
chr7 (325-394)||(40187620-40187689)
chr7 (339-379)||(7388038-7388078)
chr7 (325-377)||(21928119-21928171)
chr7 (339-375)||(34897532-34897568)
chr7 (330-394)||(35142133-35142197)
chr7 (336-376)||(42227807-42227847)
chr7 (330-394)||(46987099-46987163)
chr7 (330-377)||(5458072-5458119)
chr7 (325-372)||(10362310-10362357)
chr7 (340-379)||(27279402-27279441)
chr7 (325-364)||(34000270-34000309)
chr7 (330-377)||(46659396-46659443)
chr7 (330-360)||(8227362-8227392)
chr7 (325-363)||(15015249-15015287)
chr7 (341-379)||(16971020-16971058)
chr7 (338-376)||(36755035-36755073)
chr7 (338-376)||(36760832-36760870)
chr7 (330-372)||(37451243-37451285)
chr7 (325-394)||(2916110-2916179)
chr7 (325-394)||(10236889-10236958)
chr7 (325-366)||(19684224-19684265)
chr7 (330-363)||(22777374-22777407)
chr7 (330-363)||(27833416-27833449)
chr7 (336-365)||(30059538-30059567)
chr7 (339-368)||(38454024-38454053)
chr7 (330-387)||(39926529-39926586)
chr7 (327-356)||(44797361-44797390)
chr7 (330-379)||(45151390-45151439)
chr7 (330-363)||(48527203-48527236)
chr7 (332-388)||(14623475-14623531)
chr7 (330-394)||(18714461-18714525)
chr7 (337-389)||(19793541-19793593)
chr7 (336-388)||(22327697-22327749)
chr7 (325-377)||(35165541-35165593)
chr7 (330-366)||(38553831-38553867)
chr7 (330-366)||(43998588-43998624)
[»] chr3 (37 HSPs)
chr3 (330-388)||(45096039-45096097)
chr3 (330-388)||(55126019-55126077)
chr3 (330-387)||(30200839-30200896)
chr3 (330-368)||(5117221-5117259)
chr3 (327-377)||(21245803-21245853)
chr3 (340-394)||(22843487-22843541)
chr3 (325-366)||(22462320-22462361)
chr3 (330-394)||(29631199-29631263)
chr3 (330-386)||(35191809-35191865)
chr3 (332-368)||(41822136-41822172)
chr3 (330-366)||(45254244-45254280)
chr3 (340-388)||(48688137-48688185)
chr3 (325-376)||(40715339-40715390)
chr3 (325-364)||(53221966-53222005)
chr3 (330-385)||(54230092-54230147)
chr3 (325-363)||(7827516-7827554)
chr3 (325-363)||(7829904-7829942)
chr3 (330-364)||(31085021-31085055)
chr3 (341-375)||(43630421-43630455)
chr3 (330-363)||(4216414-4216447)
chr3 (330-375)||(33404241-33404286)
chr3 (325-394)||(38573557-38573626)
chr3 (327-360)||(41087581-41087614)
chr3 (332-377)||(53162213-53162258)
chr3 (325-385)||(2563937-2563997)
chr3 (340-388)||(8075808-8075856)
chr3 (325-377)||(8127471-8127523)
chr3 (330-366)||(14741807-14741843)
chr3 (330-394)||(17507683-17507747)
chr3 (336-364)||(26973380-26973408)
chr3 (336-372)||(27199428-27199464)
chr3 (343-379)||(31463510-31463546)
chr3 (325-389)||(39100405-39100469)
chr3 (328-364)||(41258982-41259018)
chr3 (339-379)||(42269320-42269359)
chr3 (336-380)||(43334510-43334554)
chr3 (336-380)||(55395322-55395366)
[»] chr6 (32 HSPs)
chr6 (325-394)||(404171-404240)
chr6 (336-388)||(3808108-3808160)
chr6 (332-379)||(3274016-3274063)
chr6 (325-388)||(9333970-9334033)
chr6 (343-394)||(35110080-35110131)
chr6 (340-377)||(1989044-1989081)
chr6 (336-385)||(10497145-10497194)
chr6 (330-367)||(12204382-12204419)
chr6 (330-379)||(24623316-24623365)
chr6 (325-377)||(2617206-2617258)
chr6 (327-379)||(19554163-19554215)
chr6 (332-388)||(29431474-29431530)
chr6 (336-388)||(30374522-30374574)
chr6 (330-377)||(8138459-8138506)
chr6 (325-368)||(15291700-15291743)
chr6 (327-377)||(884070-884120)
chr6 (325-363)||(1794966-1795004)
chr6 (330-380)||(14945511-14945561)
chr6 (330-368)||(28046188-28046226)
chr6 (325-363)||(28898864-28898902)
chr6 (340-377)||(331887-331924)
chr6 (332-377)||(9923255-9923300)
chr6 (330-363)||(18256896-18256929)
chr6 (330-379)||(29069496-29069545)
chr6 (325-378)||(31971537-31971590)
chr6 (330-363)||(33824894-33824927)
chr6 (330-378)||(2692228-2692276)
chr6 (325-381)||(3373378-3373434)
chr6 (340-376)||(4826313-4826349)
chr6 (325-361)||(6470633-6470669)
chr6 (336-384)||(6503279-6503327)
chr6 (325-377)||(14169546-14169598)
[»] scaffold0328 (1 HSPs)
scaffold0328 (336-394)||(3333-3391)
[»] scaffold1619 (1 HSPs)
scaffold1619 (340-388)||(1054-1102)
[»] scaffold0182 (1 HSPs)
scaffold0182 (325-376)||(17773-17824)
[»] scaffold0024 (1 HSPs)
scaffold0024 (331-394)||(104768-104831)
[»] scaffold0565 (1 HSPs)
scaffold0565 (336-374)||(6972-7010)
[»] scaffold0009 (1 HSPs)
scaffold0009 (340-394)||(65096-65150)
[»] scaffold0350 (1 HSPs)
scaffold0350 (330-363)||(1261-1294)
[»] scaffold0334 (1 HSPs)
scaffold0334 (339-380)||(5204-5245)
[»] scaffold0238 (1 HSPs)
scaffold0238 (325-394)||(25397-25466)
[»] scaffold1694 (1 HSPs)
scaffold1694 (330-394)||(168-232)
[»] scaffold0426 (1 HSPs)
scaffold0426 (330-394)||(5824-5888)
[»] scaffold0262 (1 HSPs)
scaffold0262 (336-388)||(15920-15972)
[»] scaffold0070 (1 HSPs)
scaffold0070 (325-385)||(42925-42985)


Alignment Details
Target: chr5 (Bit Score: 263; Significance: 1e-146; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 18 - 409
Target Start/End: Complemental strand, 27244932 - 27244541
Alignment:
Q  18 ctttctgccatcttgtccaccctttcagccacttcttctacaatgtttgctacttgttctgcgttttctattgttgtttcaactttctctacgcacaaag 117  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  27244932 ctttctgccatcttgtccaccctttcagccacttcttccacaatgtttgctacttgttctgctttttctattgttgtttcaactttctctacacacaaag 27244833  T
Q  118 aatgaataatttgtgtaagatttttctatttatttttgaagaattatggttgattattaaacaaccaaagaaattattaatcgcctaagtaaagtggtac 217  Q
    |||||||| |||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27244832 aatgaatattttgt--aagatttttctatttatttttgaaggattatggttgattattaaacaaccaaagaaattattagtcgcctaagtaaagtggtac 27244735  T
Q  218 caccaataagactagtgtgactaatttctatcgattgttgaataaattatccacaatttctgaaggtgtcgcctcnnnnnnnagttcaaggtatcaccat 317  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||       ||||||||| |||||  |    
T  27244734 caccaataagactagtgtggctaatttctattgattgttgaataaattatccataatttctgaaggtgtcgcctctttttttagttcaaggcatcactgt 27244635  T
Q  318 ctccgtgaacttagttgataaggacaatgcata--atatatgtaaggtttgagattcaaaccccagacaccacccaaaagtacaaggtatcacc 409  Q
    | ||||||| |||||||||||||||||| ||||  |||||| |||| |||||||||| || ||| ||||||||| | |||||||||||||||||    
T  27244634 ccccgtgaaattagttgataaggacaatacataatatatatataagatttgagattcgaatcccggacaccaccaataagtacaaggtatcacc 27244541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 540
Target Start/End: Complemental strand, 27244480 - 27244410
Alignment:
Q  470 gttcctctaacaaatgtataaattaattttatacttatatcaaattaaaatatgtcattgattcatctcac 540  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  27244480 gttcctctaaaaaatgtataaattaattttatacttatatcaaattaaaatatgtcattgcttcatatcac 27244410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 21657437 - 21657388
Alignment:
Q  339 ggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  21657437 ggacaatgcataatatatgtaaggtttgaggttcaaacctcagacaccac 21657388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 395
Target Start/End: Complemental strand, 23118104 - 23118034
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaag 395  Q
    |||| ||||||||||||||||||||||||||||||||||||| | ||| ||| |  ||||||||| |||||    
T  23118104 aactcagttgataaggacaatgcataatatatgtaaggtttggggttcgaactctggacaccaccaaaaag 23118034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 325 - 364
Target Start/End: Complemental strand, 27651583 - 27651544
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtt 364  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  27651583 aacttagttggtaaggacaatgcataatatatgtaaggtt 27651544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 4432124 - 4432162
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  4432124 aactcagttgataaggacaatgcataatatatgtaaggt 4432162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 7216819 - 7216881
Alignment:
Q  332 ttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||||||||| ||| |||||||||||||||| || |||||||| | ||||||||||| ||||    
T  7216819 ttgataaggacgatgaataatatatgtaaggtatgtgattcaaatctcagacaccaccaaaaa 7216881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 29695023 - 29695077
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||| |||||||| |||||||||||||||||||||||||| | | ||||||||||    
T  29695023 aactcagttgatatggacaatgcataatatatgtaaggttcgtggttcaaacccc 29695077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 375
Target Start/End: Original strand, 40445991 - 40446041
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaa 375  Q
    |||| |||||||||||||||||||||||||||| ||||| |||| ||||||    
T  40445991 aactcagttgataaggacaatgcataatatatgcaaggtctgaggttcaaa 40446041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 381
Target Start/End: Original strand, 689555 - 689611
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccag 381  Q
    |||| |||||||| |||||||| |||||||||||||| |||||  ||||||||||||    
T  689555 aactcagttgatatggacaatgtataatatatgtaagatttgatgttcaaaccccag 689611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 3052200 - 3052252
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||| |||||||||||||||||||||||| | |||||| ||||| ||||||    
T  3052200 taaggataatgcataatatatgtaaggtttggggttcaaatcccagccaccac 3052252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 41630158 - 41630102
Alignment:
Q  332 ttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||| ||||||||||||||||||| |||||| | |||||||||||| | ||||||    
T  41630158 ttgatagggacaatgcataatatatgcaaggttcgggattcaaaccccggtcaccac 41630102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 42168993 - 42168934
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 389  Q
    ||||| ||||||||||||||| |||||| ||||| || | ||| ||||||||||||||||    
T  42168993 agttggtaaggacaatgcatagtatatgcaaggtctggggttcgaaccccagacaccacc 42168934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 7070925 - 7070963
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  7070925 aacttagttgatacagacaatgcataatatatgtaaggt 7070963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 8545042 - 8545004
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  8545042 aactcagttgataaggacaatgcataatatatgcaaggt 8545004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 379
Target Start/End: Complemental strand, 31602862 - 31602824
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  31602862 acaatgcataatatatgcaaggttcgagattcaaacccc 31602824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 364
Target Start/End: Original strand, 42964522 - 42964556
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtt 364  Q
    ||||||||||||||||| |||||||||||||||||    
T  42964522 agttgataaggacaatgtataatatatgtaaggtt 42964556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 2951409 - 2951361
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacac 385  Q
    ||||||||||||||||||||||||||| ||||| ||| ||||| ||||||    
T  2951409 taaggacaatgcataatatatgtaagg-ttgaggttcgaaccctagacac 2951361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 387
Target Start/End: Original strand, 5846042 - 5846099
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacacca 387  Q
    ||||| |||||||||||||||||||||| || || || | |||||||||| |||||||    
T  5846042 agttggtaaggacaatgcataatatatgcaaagtctggggttcaaaccccggacacca 5846099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 366
Target Start/End: Original strand, 11647205 - 11647246
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttg 366  Q
    |||| ||||| |||||||||||||||||||||| ||||||||    
T  11647205 aactcagttggtaaggacaatgcataatatatgcaaggtttg 11647246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 22498950 - 22499018
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||| ||||| |||||||||||||||||||||| ||||| || | ||| |||||| ||||||| ||||||    
T  22498950 aactcagttggtaaggacaatgcataatatatgcaaggtctg-ggttcgaaccccggacaccatccaaaa 22499018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 368
Target Start/End: Complemental strand, 42854359 - 42854330
Alignment:
Q  339 ggacaatgcataatatatgtaaggtttgag 368  Q
    ||||||||||||||||||||||||||||||    
T  42854359 ggacaatgcataatatatgtaaggtttgag 42854330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 6489020 - 6489084
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||| || ||||||||||||||||||| ||||| || | |||||||||| | ||||||| ||||    
T  6489020 agttggtagggacaatgcataatatatgcaaggtctggggttcaaaccccggccaccaccaaaaa 6489084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 7861052 - 7861016
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggt 363  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  7861052 cttagttgatagggacaatgcataatatatgcaaggt 7861016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 9595562 - 9595598
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||| |||||||||||||||| |||||||||||    
T  9595562 cttagttgttaaggacaatgcataaaatatgtaaggt 9595598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 11823559 - 11823512
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||||| ||||||||||||||||||| || || |||||||||||||||    
T  11823559 gacaatgtataatatatgtaaggtttg-gagtcgaaccccagacaccac 11823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 376
Target Start/End: Original strand, 29904440 - 29904480
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    |||||||||| |||||||||||||||||| ||| |||||||    
T  29904440 taaggacaatacataatatatgtaaggttcgaggttcaaac 29904480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 366
Target Start/End: Complemental strand, 36321542 - 36321506
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttg 366  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  36321542 agttggtaaggacaatgcataatatatgcaaggtttg 36321506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 39143727 - 39143775
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 378  Q
    ||||| || ||||| |||||||||||||||||||||||| ||| |||||    
T  39143727 agttggtatggacattgcataatatatgtaaggtttgaggttcgaaccc 39143775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 376
Target Start/End: Complemental strand, 46434808 - 46434762
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  46434808 agttgataaggacaatgcataatatatgtaaggtttgaggttcaaac 46434762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 39842065 - 39842016
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaa 374  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  39842065 aactcagttgataaggacaatgcataatatatgtaaggtttgaggttcaa 39842016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 9783909 - 9783976
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||||||||| ||||||||||||||||||||||||| |||| |||||||| | | ||||||| ||||    
T  9783909 cttagttgatatggacaatgcataatatatgtaaggtctgaggttcaaacctcggccaccaccaaaaa 9783976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 1657072 - 1657020
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||||||||||||||||||||||||||||| | ||| ||||| |||||||||    
T  1657072 taaggacaatgcataatatatgtaaggtttggggttcgaacccaagacaccac 1657020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 29568605 - 29568657
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||||||||||||||||||||||||||  ||| ||| |||||||||||||||    
T  29568605 taaggacaatgcataatatatgtaaggtccgaggttcgaaccccagacaccac 29568657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 54677240 - 54677284
Alignment:
Q  332 ttgataaggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  54677240 ttgatatggacaatgcataatatatgtaaggttcgagattcaaac 54677284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 385
Target Start/End: Original strand, 56096212 - 56096272
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacac 385  Q
    |||| ||||||||||||||||||||||||||||||||||| | | ||||||| ||| ||||    
T  56096212 aactcagttgataaggacaatgcataatatatgtaaggttcgtggttcaaactccaaacac 56096272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 11269702 - 11269771
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||||||||| |||||||||| ||||||||||| ||||| |  | ||| |||||||||||||||| ||||    
T  11269702 aacttagttggtaaggacaatacataatatatgcaaggtcttgggttcgaaccccagacaccaccaaaaa 11269771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 34595989 - 34595920
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||| ||||| ||||||||||||||||||||||||| ||| | | ||  |||||||||||||||| ||||    
T  34595989 aactcagttggtaaggacaatgcataatatatgtaaagttcggggtttgaaccccagacaccaccaaaaa 34595920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 43034395 - 43034326
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||| ||||| || ||||||||||||||||||| ||||| |||| |||||||||| | ||||||| ||||    
T  43034395 aactcagttggtatggacaatgcataatatatgcaaggtctgaggttcaaaccccggccaccaccaaaaa 43034326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 50650974 - 50650941
Alignment:
Q  331 gttgataaggacaatgcataatatatgtaaggtt 364  Q
    ||||||||||||||||||||||||||||||||||    
T  50650974 gttgataaggacaatgcataatatatgtaaggtt 50650941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 380
Target Start/End: Original strand, 16703031 - 16703079
Alignment:
Q  332 ttgataaggacaatgcataatatatgtaaggtttgagattcaaacccca 380  Q
    |||||| ||| |||| |||||||||||||||| ||||||||||||||||    
T  16703031 ttgatatggataatgaataatatatgtaaggtatgagattcaaacccca 16703079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 368
Target Start/End: Original strand, 21465630 - 21465662
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgag 368  Q
    |||||||||||||||||||||||||||||||||    
T  21465630 taaggacaatgcataatatatgtaaggtttgag 21465662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 28435296 - 28435232
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||| || ||||||||||||||||||| |||||| | | |||||||||||| ||||||| ||||    
T  28435296 agttggtatggacaatgcataatatatgcaaggttcggggttcaaaccccagccaccaccaaaaa 28435232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 364
Target Start/End: Original strand, 874467 - 874506
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtt 364  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  874467 aacttagttgatatggacaatgcataatatatataaggtt 874506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 3299131 - 3299092
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaacccca 380  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  3299131 acaatgcataatatatgcaaggtttgaggttcaaacccca 3299092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 376
Target Start/End: Complemental strand, 12192528 - 12192493
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaac 376  Q
    ||||||||||||||||| ||||||||||||||||||    
T  12192528 acaatgcataatatatgcaaggtttgagattcaaac 12192493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 377
Target Start/End: Original strand, 37735810 - 37735849
Alignment:
Q  338 aggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  37735810 aggacaatgcataatatatgtaaggtctgaggttcaaacc 37735849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 364
Target Start/End: Original strand, 47016630 - 47016665
Alignment:
Q  329 tagttgataaggacaatgcataatatatgtaaggtt 364  Q
    |||||||||| |||||||||||||||||||||||||    
T  47016630 tagttgataaagacaatgcataatatatgtaaggtt 47016665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 372
Target Start/End: Original strand, 54587908 - 54587955
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattc 372  Q
    |||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  54587908 aactcagttgatatggataatgcataatatatgtaaggtttgggattc 54587955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 6459977 - 6459939
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  6459977 aactcagttgatatggacaatgcataatatatgtaaggt 6459939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 364
Target Start/End: Original strand, 12439677 - 12439711
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtt 364  Q
    |||||||||||||||||||||||||||| ||||||    
T  12439677 agttgataaggacaatgcataatatatgcaaggtt 12439711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 17216177 - 17216119
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||||| | ||||||||||||||| ||||| |||  ||| |||||||||||||||    
T  17216177 agttgataagaataatgcataatatatgcaaggtctgaagttcgaaccccagacaccac 17216119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 364
Target Start/End: Original strand, 36071157 - 36071191
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtt 364  Q
    ||||| |||||||||||||||||||||||||||||    
T  36071157 agttggtaaggacaatgcataatatatgtaaggtt 36071191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 364
Target Start/End: Complemental strand, 42756154 - 42756120
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtt 364  Q
    |||||||||||||||||||||||||||| ||||||    
T  42756154 agttgataaggacaatgcataatatatgcaaggtt 42756120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 366
Target Start/End: Complemental strand, 45029647 - 45029617
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttg 366  Q
    |||||||||||||||||||||||||||||||    
T  45029647 taaggacaatgcataatatatgtaaggtttg 45029617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 56551640 - 56551582
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||| |||||||||||||||||||||| |||||  ||| |||||||||| | ||||||    
T  56551640 agttggtaaggacaatgcataatatatgcaaggtccgaggttcaaaccccggccaccac 56551582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 10564513 - 10564464
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    ||||| || ||||||| ||||||||||||||||| |||| ||||||||||    
T  10564513 agttggtatggacaatacataatatatgtaaggtctgaggttcaaacccc 10564464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 11166696 - 11166757
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||| ||||||||||| |||||||||| ||||| | || ||| |||||| ||||||||    
T  11166696 cttagttggtaaggacaatgtataatatatgcaaggtctaaggttcgaaccccggacaccac 11166757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 377
Target Start/End: Complemental strand, 11286819 - 11286782
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  11286819 gacaatgcataatatatgcaaggtctgagattcaaacc 11286782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 12263265 - 12263310
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaa 375  Q
    |||||| |||||||||| |||||||||||||||| |||| ||||||    
T  12263265 agttgacaaggacaatgtataatatatgtaaggtctgaggttcaaa 12263310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Complemental strand, 29808316 - 29808283
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||||||||||||||||||||||| |||||    
T  29808316 agttgataaggacaatgcataatatatgcaaggt 29808283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Original strand, 36203249 - 36203282
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||||||||||||||||||||||| |||||    
T  36203249 agttgataaggacaatgcataatatatgcaaggt 36203282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 375
Target Start/End: Original strand, 8734872 - 8734908
Alignment:
Q  339 ggacaatgcataatatatgtaaggtttgagattcaaa 375  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  8734872 ggacaatgcataatatatgtaaggtctgaggttcaaa 8734908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 9196221 - 9196253
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatg 357  Q
    ||||||||||||| |||||||||||||||||||    
T  9196221 aacttagttgatatggacaatgcataatatatg 9196253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 11144713 - 11144649
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||||||| |||||||||||||||||| ||||| || | ||  |||||| ||||||||| ||||    
T  11144713 agttgataaagacaatgcataatatatgcaaggtctggggtttgaaccccggacaccaccaaaaa 11144649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 13121554 - 13121606
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||| || ||||||||||||||||||| ||||| |||  ||||||||||    
T  13121554 cttagttggtagggacaatgcataatatatgcaaggtctgaagttcaaacccc 13121606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 22040663 - 22040711
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 378  Q
    |||||||| ||||||||||||||||||| |||||| | | |||||||||    
T  22040663 agttgatatggacaatgcataatatatgcaaggttcggggttcaaaccc 22040711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 22164320 - 22164268
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||| || | ||||||||||||||||||||||| || | ||||||||||    
T  22164320 cttagttggtaggaacaatgcataatatatgtaaggtctggggttcaaacccc 22164268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 22411777 - 22411841
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||| || |||||||||||||||||||||||||| | | ||||||| | || ||||||| ||||    
T  22411777 agttggtatggacaatgcataatatatgtaaggttcggggttcaaactctagccaccaccaaaaa 22411841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 25978336 - 25978388
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||||||||||||||||| |||||  ||| ||| || ||||||||||||    
T  25978336 taaggacaatgcataatatatgcaaggtccgaggttcgaatcccagacaccac 25978388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 26004647 - 26004702
Alignment:
Q  332 ttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||||||| ||||||||||||| |||| ||||||||| ||| ||| |||||||    
T  26004647 ttgataaggacagtgcataatatatgcaagg-ttgagattcgaactccaaacaccac 26004702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 381
Target Start/End: Complemental strand, 32923240 - 32923200
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaaccccag 381  Q
    |||||||||||||||||||||||| | | ||||||||||||    
T  32923240 acaatgcataatatatgtaaggttcggggttcaaaccccag 32923200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 379
Target Start/End: Original strand, 36479013 - 36479053
Alignment:
Q  339 ggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||||||||||||||||||||| ||| ||| ||||||    
T  36479013 ggacaatgcataatatatgtaaggttcgaggttcgaacccc 36479053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 46676546 - 46676482
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||| |||||||||||||||||||||| |||||  | | ||| | |||||||||||||| ||||    
T  46676546 agttggtaaggacaatgcataatatatgcaaggtccggggttcgacccccagacaccaccaaaaa 46676482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 49716974 - 49716930
Alignment:
Q  343 aatgcataatatatgtaaggtttgagattcaaaccccagacacca 387  Q
    ||||||||||||||| |||||||||| ||| |||||| |||||||    
T  49716974 aatgcataatatatgcaaggtttgaggttctaaccccggacacca 49716930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 10841908 - 10841962
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  10841908 aactcagttgatatggacaatgcataatatatataaggtttgagattcaaacccc 10841962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 376
Target Start/End: Complemental strand, 22388228 - 22388177
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  22388228 aacttagttgatagggacaatgcataatatatgtaacgttcgagattcaaac 22388177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 41974774 - 41974832
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||| ||| ||||||||||||||| |||||||||| |||||||||| | ||||||    
T  41974774 agttgatagggataatgcataatatatgcaaggtttgaggttcaaaccccggccaccac 41974832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 376
Target Start/End: Complemental strand, 16967245 - 16967196
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    ||||||||||| ||||||||||||||||||| |||||| ||| |||||||    
T  16967245 cttagttgatatggacaatgcataatatatgcaaggttcgaggttcaaac 16967196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 17917186 - 17917137
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||| ||||||||||||| |||||||||||| | ||||||||||||    
T  17917186 agttgatatggacaatgcataaaatatgtaaggttcgggattcaaacccc 17917137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 33020082 - 33020033
Alignment:
Q  339 ggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||||||||||||||||| ||||| |||| |||||||||||| ||||||    
T  33020082 ggacaatgcataatatatgcaaggtctgaggttcaaaccccagccaccac 33020033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 33175271 - 33175332
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||| |||||| ||||||||||||||||||||||||| |||| |||||| | ||| ||||||    
T  33175271 cttaattgatatggacaatgcataatatatgtaaggtatgaggttcaaatctcagccaccac 33175332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 35632912 - 35632957
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaa 375  Q
    |||||||| |||||||||||||||||| ||||||||||| ||||||    
T  35632912 agttgatatggacaatgcataatatatataaggtttgaggttcaaa 35632957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 365
Target Start/End: Original strand, 3248785 - 3248825
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggttt 365  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  3248785 aacttagttggtatggacaatgcataatatatgtaaggttt 3248825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 9398466 - 9398394
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaagta 397  Q
    |||| ||||| |||| ||||||||| ||||||||||||| || | ||| ||||||||||| |||| |||||||    
T  9398466 aactcagttggtaagaacaatgcatgatatatgtaaggtctggggttcgaaccccagacaacaccaaaaagta 9398394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 9872153 - 9872089
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||| |||||| ||||||||||||||| |||||||| | ||| ||||||||||| |||| ||||    
T  9872153 agttggtaaggataatgcataatatatgcaaggtttgcggttcgaaccccagacagcaccaaaaa 9872089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 19262955 - 19262891
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||||||||||||||||||||| ||||| || ||| | | ||| |||||||||||||||| ||||    
T  19262955 agttgataaggacaatgcataacatatgcaaagttcggggttcgaaccccagacaccaccaaaaa 19262891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 29701373 - 29701337
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaag 361  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29701373 aacttagttgatatggacaatgcataatatatgtaag 29701337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 34083356 - 34083408
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||| |||||||||||||||||||||||||| | ||| |||||||| ||||||    
T  34083356 taagaacaatgcataatatatgtaaggtttggggttcgaaccccagccaccac 34083408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 388
Target Start/End: Complemental strand, 6000196 - 6000133
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||| ||||| | |||||||||||||||||||| |||||  ||| |||||||||| ||||||||    
T  6000196 aactcagttggttaggacaatgcataatatatgcaaggtccgaggttcaaaccccggacaccac 6000133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 366
Target Start/End: Complemental strand, 19533229 - 19533190
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggtttg 366  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  19533229 cttagttgataaggacaatgcataatatatgcaagatttg 19533190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 364
Target Start/End: Complemental strand, 30548144 - 30548105
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtt 364  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  30548144 aacttagttggtaaggacaatgcataatatatgcaaggtt 30548105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 31962455 - 31962490
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaa 360  Q
    |||||||||| |||||||||||||||||||||||||    
T  31962455 aacttagttggtaaggacaatgcataatatatgtaa 31962490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 388
Target Start/End: Complemental strand, 33153933 - 33153870
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||| ||||| || |||||||||||||||||||||||||  ||| ||||||||||  |||||||    
T  33153933 aactcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaaccccgaacaccac 33153870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 364
Target Start/End: Original strand, 43843899 - 43843938
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtt 364  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  43843899 aacttagttggtaaggacaatgcataatatatgcaaggtt 43843938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 3157754 - 3157700
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaag 395  Q
    ||||||||||||||||  |||||||||| |||||||||||  ||||||| |||||    
T  3157754 acaatgcataatatatacaaggtttgaggttcaaaccccaaccaccaccaaaaag 3157700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 379
Target Start/End: Original strand, 22335378 - 22335420
Alignment:
Q  337 aaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||    
T  22335378 aaggacaatgcataatatatgcaaggtctgaggttcaaacccc 22335420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 23405411 - 23405373
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  23405411 aacttagttgttaaggacaatgcataatatatgcaaggt 23405373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 45190317 - 45190259
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||| || ||||||||||||||||||| |||||| | ||||||||||| || ||||||    
T  45190317 agttggtatggacaatgcataatatatgcaaggttcgggattcaaaccctagccaccac 45190259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 46334783 - 46334837
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||| |||||||||| ||||||||||| ||||  ||||| |||||||||||||||    
T  46334783 aactcagttgataagaacaatgcataaaatatacaaggtctgagattcaaacccc 46334837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Complemental strand, 2817421 - 2817388
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    ||||| ||||||||||||||||||||||||||||    
T  2817421 agttggtaaggacaatgcataatatatgtaaggt 2817388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 3693844 - 3693795
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    ||||||||  ||||| |||||||||||||||||| |||| ||||||||||    
T  3693844 agttgatatagacaaagcataatatatgtaaggtctgaggttcaaacccc 3693795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 377
Target Start/End: Complemental strand, 4806833 - 4806796
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  4806833 gacaatgtataatatatgtaaggtttgaggttcaaacc 4806796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 7996726 - 7996681
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaaccccagacacc 386  Q
    |||||||||||||||||||| ||||||| |||||||| | ||||||    
T  7996726 acaatgcataatatatgtaaagtttgaggttcaaacctcggacacc 7996681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 10292944 - 10292981
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaagg 362  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  10292944 aactcagttgatagggacaatgcataatatatgtaagg 10292981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 13401610 - 13401659
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    ||||||||  ||||||||||||||||||||||||| | | ||||||||||    
T  13401610 agttgatagagacaatgcataatatatgtaaggttcggggttcaaacccc 13401659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 29798160 - 29798107
Alignment:
Q  334 gataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacacca 387  Q
    |||||| ||||||||||||||||||||||| || | ||| ||| ||||||||||    
T  29798160 gataagaacaatgcataatatatgtaaggtctggggttcgaacaccagacacca 29798107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Original strand, 41926835 - 41926868
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    ||||| ||||||||||||||||||||||||||||    
T  41926835 agttggtaaggacaatgcataatatatgtaaggt 41926868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Original strand, 42860126 - 42860167
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||| |||||||||||||||||||||||| | ||||||||||    
T  42860126 taagaacaatgcataatatatgtaaggttcgggattcaaacc 42860167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 379
Target Start/End: Original strand, 43356456 - 43356497
Alignment:
Q  338 aggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||||||||||||||||||||||||   ||||||||||    
T  43356456 aggacaatgcataatatatgtaaggtttggagttcaaacccc 43356497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 18101657 - 18101609
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||| ||||||||| ||||| |||||||||||| || ||||||||    
T  18101657 gacaatgcgtaatatatgcaaggtatgagattcaaactccggacaccac 18101609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 21041357 - 21041421
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||| || ||||||||||||| ||||| || ||||||| ||| |||||||| ||||||| ||||    
T  21041357 agttggtatggacaatgcataaaatatgaaatgtttgaggttcgaaccccagccaccaccaaaaa 21041421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 30937485 - 30937521
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||||||||||||||| |||||||||| |||||    
T  30937485 cttagttgataaggacaatgtataatatatgcaaggt 30937521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 366
Target Start/End: Original strand, 42416816 - 42416852
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttg 366  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  42416816 agttgataaggataatgcataatatatgcaaggtttg 42416852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 47528495 - 47528431
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||| |||||||||||||||||||| | |||||  ||| ||| |||||| ||||||||| ||||    
T  47528495 agttggtaaggacaatgcataatatacgcaaggtccgaggttcgaaccccggacaccaccaaaaa 47528431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 49868019 - 49868071
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||| |||||||| ||| ||||||||||||||| |||||  ||||||||||||    
T  49868019 aactcagttgatatggataatgcataatatatgcaaggtccgagattcaaacc 49868071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 40967424 - 40967372
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||| |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  40967424 aactcagttgataaggacaatgcataatatatgcaaggtttgaggttcaaacc 40967372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 3904210 - 3904263
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 378  Q
    ||||||||||||| ||||||||||||||||||||||||| || | |||||||||    
T  3904210 aacttagttgatagggacaatgcataatatatgtaaggtctggggttcaaaccc 3904263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 5028869 - 5028918
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    ||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  5028869 agttgattaggacaatgcataatatatgtaaggtttggggttcaaacccc 5028918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 12413507 - 12413564
Alignment:
Q  331 gttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||  |||||||    
T  12413507 gttgataaggacaatgcataatatatgcaaggtctgaggttcaaaccccgtacaccac 12413564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 12425567 - 12425624
Alignment:
Q  331 gttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||  |||||||    
T  12425567 gttgataaggacaatgcataatatatgcaaggtctgaggttcaaaccccgtacaccac 12425624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 19156206 - 19156153
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 389  Q
    |||||||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  19156206 taaggacagtacataatatatgcaaggtttgaggttcaaaccccagacaccacc 19156153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 376
Target Start/End: Complemental strand, 41939159 - 41939110
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    |||||||| || ||| ||||||||||||||||||||||||||||||||||    
T  41939159 cttagttggtagggataatgcataatatatgtaaggtttgagattcaaac 41939110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 394
Target Start/End: Complemental strand, 33832716 - 33832653
Alignment:
Q  331 gttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||| ||| ||||||||||||||||||||| || |||||||| ||| |||||||||||| ||||    
T  33832716 gttggtaacgacaatgcataatatatgtaatgtctgagattcgaactccagacaccaccaaaaa 33832653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 381
Target Start/End: Complemental strand, 43117238 - 43117187
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccag 381  Q
    ||||| |||||||||||||||||||||| ||||| |||| ||||||||||||    
T  43117238 agttggtaaggacaatgcataatatatgcaaggtctgaggttcaaaccccag 43117187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 9547462 - 9547408
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||| |||||||| ||||||||||||||||||| |||||||| | ||||||||||    
T  9547462 aactcagttgatatggacaatgcataatatatgcaaggtttggggttcaaacccc 9547408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 10332323 - 10332261
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaa 392  Q
    |||||||||||||||||||||||||||| |||||  ||| |||||| ||| | ||||||||||    
T  10332323 agttgataaggacaatgcataatatatggaaggtcggaggttcaaaaccccgccaccacccaa 10332261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 24393258 - 24393316
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||| |||||||||||||||||||||| ||||| |||| ||| |||||| ||||||||    
T  24393258 agttgttaaggacaatgcataatatatgcaaggtctgaggttcgaaccccggacaccac 24393316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 32407603 - 32407553
Alignment:
Q  338 aggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||| |||||||||||||||||||||| |||||||| ||| ||||||    
T  32407603 aggacaatacataatatatgtaaggtttgaggttcaaacctcagccaccac 32407553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 3196573 - 3196618
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaa 375  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||    
T  3196573 agttgatatgaacaatgcataatatatgtaaggttcgagattcaaa 3196618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 363
Target Start/End: Original strand, 44868432 - 44868465
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    ||||||||||||||||||||||||||||||||||    
T  44868432 agttgataaggacaatgcataatatatgtaaggt 44868465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 7640677 - 7640729
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||||| ||||||||||||||||  |||| ||| |||||||||||||||    
T  7640677 taaggacaatacataatatatgtaaggcctgaggttcgaaccccagacaccac 7640729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 17842765 - 17842729
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaag 361  Q
    ||||||||||||||| |||||||||||||||||||||    
T  17842765 aacttagttgataagaacaatgcataatatatgtaag 17842729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 22608550 - 22608594
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaaccccagaca 384  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||    
T  22608550 gacaatgcataatatatgcaaggtatgaggttcaaaccccagaca 22608594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 381
Target Start/End: Original strand, 27889313 - 27889353
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaaccccag 381  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  27889313 acaatgcataaaatatgtaaggtttgaggttcaaaccccag 27889353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 376
Target Start/End: Original strand, 42451452 - 42451492
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  42451452 taaggacactgcataatatatgtaaggtttgaggttcaaac 42451492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 379
Target Start/End: Original strand, 12126892 - 12126931
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  12126892 gacaatacataatatatgtaaggtttgaggttcaaacccc 12126931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 388
Target Start/End: Complemental strand, 18612000 - 18611953
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  18612000 acaatgcataatatatgcaaggtttggggttcaaacctcagacaccac 18611953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 44926449 - 44926394
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacac 385  Q
    ||||| ||| |||||||||| ||||||||||||| || |||| |||||||||||||    
T  44926449 agttggtaaagacaatgcattatatatgtaaggtctgggatttaaaccccagacac 44926394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 364
Target Start/End: Original strand, 2429029 - 2429063
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtt 364  Q
    ||||| |||||||||||||||||||||||||||||    
T  2429029 agttggtaaggacaatgcataatatatgtaaggtt 2429063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 16204870 - 16204832
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  16204870 aactcagttgataaggacaatgcataatatatgcaaggt 16204832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 20120769 - 20120711
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||| |||||||||||||||||||||| |||||| | | |||||| ||| ||||||||    
T  20120769 agttggtaaggacaatgcataatatatgcaaggttcggggttcaaatcccggacaccac 20120711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 22267521 - 22267574
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||| ||||| || ||||||||||||||||||| |||||||||| ||||||||||    
T  22267521 aactcagttggtacggacaatgcataatatatgcaaggtttgag-ttcaaacccc 22267574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 25186290 - 25186232
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||| ||||||||||||||||||| |||||  | | |||||||||||| ||||||    
T  25186290 agttgatatggacaatgcataatatatgcaaggtccggggttcaaaccccagccaccac 25186232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 28163940 - 28163998
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||||||||||||||||||| ||| | ||| |||| ||| || ||||||||||||    
T  28163940 agttgataaggacaatgcataatacatgcacggtctgaggttcgaatcccagacaccac 28163998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 28202310 - 28202360
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccca 380  Q
    |||||||| |||||||||||||||||||||||||  ||  |||||||||||    
T  28202310 agttgatagggacaatgcataatatatgtaaggtccgaagttcaaacccca 28202360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 376
Target Start/End: Original strand, 30263275 - 30263321
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    ||||| |||||||||| ||||||||||| || |||||||||||||||    
T  30263275 agttggtaaggacaatccataatatatgcaatgtttgagattcaaac 30263321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 394
Target Start/End: Complemental strand, 30799125 - 30799074
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||||||||||||||||||||| |  | |||||||||||| ||||||||||||    
T  30799125 acaatgcataatatatgtaaggtct--ggttcaaaccccagccaccacccaaaa 30799074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 31048354 - 31048300
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||||||||| |||||| |||||| ||||||| |||||| ||||||||| ||||    
T  31048354 gacaatgcatattatatgcaaggttcgagattcgaaccccggacaccaccaaaaa 31048300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 34903530 - 34903588
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||| |||||||| ||||||||||||| ||||| |||| ||| |||||| ||||||||    
T  34903530 agttggtaaggacagtgcataatatatgcaaggtctgaggttcgaaccccggacaccac 34903588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 42181348 - 42181302
Alignment:
Q  333 tgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||| |||||||||| ||||||| |||||| ||||||||||||||    
T  42181348 tgataaagacaatgcatgatatatgcaaggttcgagattcaaacccc 42181302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 364
Target Start/End: Complemental strand, 44488058 - 44488024
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtt 364  Q
    ||||| |||||||||||||||||||||||||||||    
T  44488058 agttggtaaggacaatgcataatatatgtaaggtt 44488024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 2264816 - 2264869
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 389  Q
    |||||| |||||||||||||||||||||||| | ||| |||||  |||||||||    
T  2264816 taaggaaaatgcataatatatgtaaggtttggggttcgaaccctggacaccacc 2264869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 4897551 - 4897604
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 378  Q
    |||| ||||| |||||||||||||||||||||| |||||||  | |||||||||    
T  4897551 aactcagttggtaaggacaatgcataatatatgcaaggtttatggttcaaaccc 4897604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 4944945 - 4944998
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 378  Q
    |||| ||||| |||||||||||||||||||||| |||||||  | |||||||||    
T  4944945 aactcagttggtaaggacaatgcataatatatgcaaggtttatggttcaaaccc 4944998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Original strand, 5980240 - 5980273
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||||||||||||||||||||||| |||||    
T  5980240 agttgataaggacaatgcataatatatgcaaggt 5980273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 375
Target Start/End: Complemental strand, 25603959 - 25603914
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaa 375  Q
    |||||||| |||||||||||||||||| ||||||||| | ||||||    
T  25603959 agttgatagggacaatgcataatatatataaggtttggggttcaaa 25603914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Original strand, 39761451 - 39761484
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||||||||||||||||||||||| |||||    
T  39761451 agttgataaggacaatgcataatatatgcaaggt 39761484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 379
Target Start/End: Complemental strand, 3898036 - 3897996
Alignment:
Q  339 ggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    ||||||||||  |||||||||||||||||| ||||||||||    
T  3898036 ggacaatgcaatatatatgtaaggtttgaggttcaaacccc 3897996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 376
Target Start/End: Complemental strand, 9391806 - 9391766
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    |||||||||||||| |||||||||||||||| | |||||||    
T  9391806 taaggacaatgcatgatatatgtaaggtttggggttcaaac 9391766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 9982633 - 9982665
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatg 357  Q
    |||| ||||||||||||||||||||||||||||    
T  9982633 aactcagttgataaggacaatgcataatatatg 9982665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 13528652 - 13528696
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaaccccagaca 384  Q
    |||| ||||||||||||||| || ||||||||| |||||||||||    
T  13528652 gacattgcataatatatgtaggggttgagattcgaaccccagaca 13528696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 15333152 - 15333200
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||| ||||||||||| |||||||||  |||||||||| ||||||||    
T  15333152 gacaatacataatatatgcaaggtttgatgttcaaacccctgacaccac 15333200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 366
Target Start/End: Complemental strand, 18231521 - 18231485
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttg 366  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  18231521 agttggtaaggacaatgcataatatatgcaaggtttg 18231485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 20517035 - 20517099
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||| |||| ||||||||||||||||||||| | || ||||| ||  |||||||||||| ||||    
T  20517035 agttggtaagaacaatgcataatatatgtaagttctgggattcgaattccagacaccaccaaaaa 20517099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 22520236 - 22520288
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||| ||||||||||||||||| ||||  |||| ||||||||| |||||||||    
T  22520236 taagaacaatgcataatatatgcaaggcctgaggttcaaaccctagacaccac 22520288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 24592894 - 24592830
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||| || ||||||||||||||||||| ||||| || | |||||||||| | ||||||| ||||    
T  24592894 agttggtagggacaatgcataatatatgcaaggtctggggttcaaaccccggccaccaccaaaaa 24592830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 379
Target Start/End: Original strand, 31148648 - 31148688
Alignment:
Q  339 ggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||||||||||||| ||||||| | ||||||||||||    
T  31148648 ggacaatgcataatatatataaggttcgggattcaaacccc 31148688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 368
Target Start/End: Complemental strand, 39384204 - 39384172
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgag 368  Q
    |||||||||||||||||||||||||||| ||||    
T  39384204 taaggacaatgcataatatatgtaaggtctgag 39384172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 364
Target Start/End: Complemental strand, 39770568 - 39770540
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtt 364  Q
    |||||||||||||||||||||||||||||    
T  39770568 taaggacaatgcataatatatgtaaggtt 39770540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 40546329 - 40546393
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||| ||||| ||||||||||||||||| || ||| ||  ||||||||||||||| |||| ||||    
T  40546329 agttaataagaacaatgcataatatatgcaatgttcgatgttcaaaccccagacaacaccaaaaa 40546393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 395
Target Start/End: Complemental strand, 29924970 - 29924900
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaag 395  Q
    |||||||||| |||| ||||||||||||||||| |||||| | | || ||||||||||||||||| |||||    
T  29924970 aacttagttgttaagaacaatgcataatatatgcaaggttcggggtttaaaccccagacaccaccaaaaag 29924900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 27044932 - 27044879
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 389  Q
    |||||||||| ||||||||||||||||| |||| |||||||||| |||||||||    
T  27044932 taaggacaattcataatatatgtaaggtctgaggttcaaaccccggacaccacc 27044879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 3102316 - 3102380
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 389  Q
    |||||| |||| ||| |||||| ||||||||||||||||||||| ||| |||| |||||||||||    
T  3102316 aacttaattgacaagaacaatgtataatatatgtaaggtttgaggttcgaacctcagacaccacc 3102380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 5881031 - 5880968
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||| || |||||||| ||||    
T  5881031 agttgataag-acaatgcataatatatacaaggtttgagattcaaacctcaaacaccaccaaaaa 5880968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 8720083 - 8720031
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||| |||||||||||||||||||||||||||  || ||||||||||||||||    
T  8720083 taagaacaatgcataatatatgtaaggtttgaagttaaaaccccagacaccac 8720031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 30071569 - 30071515
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    ||||||||||||||| ||||||||||||||||  |||||||||| ||| ||||||    
T  30071569 aacttagttgataagaacaatgcataatatatacaaggtttgaggttctaacccc 30071515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 13272575 - 13272522
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 378  Q
    |||| |||||||| |||||||||||||||||||||| || ||||||| ||||||    
T  13272575 aactcagttgatatggacaatgcataatatatgtaatgtctgagatttaaaccc 13272522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 389
Target Start/End: Complemental strand, 1230698 - 1230650
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 389  Q
    |||||||||||||||||||||||||||| |||||| | ||| |||||||    
T  1230698 acaatgcataatatatgtaaggtttgaggttcaaaactcagccaccacc 1230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 20284962 - 20284926
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaag 361  Q
    |||| ||||||||||||||||||||||||||||||||    
T  20284962 aactgagttgataaggacaatgcataatatatgtaag 20284926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 21071591 - 21071555
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaag 361  Q
    |||| ||||||||||||||||||||||||||||||||    
T  21071591 aactgagttgataaggacaatgcataatatatgtaag 21071555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 13284318 - 13284263
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccca 380  Q
    |||| |||||||| | |||||| ||||||||| ||||||||||| |||||||||||    
T  13284318 aactcagttgatatgaacaatgtataatatatataaggtttgaggttcaaacccca 13284263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 17704026 - 17704073
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    ||||| |||||||||||||||||||||| ||||| || ||||||||||    
T  17704026 agttggtaaggacaatgcataatatatgcaaggtctgtgattcaaacc 17704073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 18422490 - 18422451
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaacccca 380  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  18422490 acaatgcataatatatgtaaggttcgggattcaaacccca 18422451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 19260630 - 19260563
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||||||||| | |||||||||||||||||||||||  | | |||||||||| | ||||||| ||||    
T  19260630 cttagttgatatgtacaatgcataatatatgtaaggtccggggttcaaaccccggccaccaccaaaaa 19260563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Complemental strand, 26991805 - 26991758
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||||||| ||||||||||||||||||| |||||||| | ||||||||    
T  26991805 agttgatatggacaatgcataatatatgcaaggtttgtggttcaaacc 26991758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 388
Target Start/End: Original strand, 33445594 - 33445641
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||||||||||||||  |||||||||||||| |||| ||||||||||    
T  33445594 acaatgcataatatatacaaggtttgagattcgaacctcagacaccac 33445641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 19701397 - 19701359
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  19701397 aactcagttgataaggataatgcataatatatgtaaggt 19701359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 368
Target Start/End: Complemental strand, 38535121 - 38535083
Alignment:
Q  331 gttgataaggacaatgcataatatatgta-aggtttgag 368  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  38535121 gttgataaggacaatgcataatatatgtagaggtttgag 38535083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Complemental strand, 6038323 - 6038290
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||| |||||||||||||||||||||||||    
T  6038323 agttgatatggacaatgcataatatatgtaaggt 6038290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 380
Target Start/End: Original strand, 7433162 - 7433203
Alignment:
Q  339 ggacaatgcataatatatgtaaggtttgagattcaaacccca 380  Q
    ||||||||||||||||||||||||| || ||||| |||||||    
T  7433162 ggacaatgcataatatatgtaaggtctgggattcgaacccca 7433203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 8442540 - 8442491
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaa 374  Q
    |||| ||||| |||||||||||||||||||||| ||||| |||| |||||    
T  8442540 aactcagttggtaaggacaatgcataatatatgcaaggtctgaggttcaa 8442491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 28439972 - 28440021
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    ||||||||| || ||||||||||||||||||||| || | ||||||||||    
T  28439972 agttgataaagataatgcataatatatgtaaggtctggggttcaaacccc 28440021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Original strand, 30874733 - 30874766
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||| |||||||||||||||||||||||||||    
T  30874733 agttgacaaggacaatgcataatatatgtaaggt 30874766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 379
Target Start/End: Original strand, 32944942 - 32944987
Alignment:
Q  334 gataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||||||||||||||||||| ||||| |||  ||||||||||    
T  32944942 gataaggacaatgcataatatatgcaaggtctgaagttcaaacccc 32944987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 6100023 - 6099979
Alignment:
Q  335 ataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||| ||||||||||||||||||| |||| |||||||| ||||||    
T  6100023 ataaagacaatgcataatatatgtgaggtctgagattcgaacccc 6099979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 360
Target Start/End: Complemental strand, 14897639 - 14897607
Alignment:
Q  328 ttagttgataaggacaatgcataatatatgtaa 360  Q
    ||||||| |||||||||||||||||||||||||    
T  14897639 ttagttggtaaggacaatgcataatatatgtaa 14897607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 20275231 - 20275179
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||||||||||||| ||| |||||| | | |||||||||||| ||||||    
T  20275231 taaggacaatgcataatacatgcaaggttcggggttcaaaccccagccaccac 20275179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 21061858 - 21061806
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||||||||||||| ||| |||||| | | |||||||||||| ||||||    
T  21061858 taaggacaatgcataatacatgcaaggttcggggttcaaaccccagccaccac 21061806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 24696054 - 24696006
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 378  Q
    |||||||| ||||||||||||||||||| ||| |  |||||||||||||    
T  24696054 agttgatatggacaatgcataatatatgcaagatccgagattcaaaccc 24696006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 349 - 377
Target Start/End: Original strand, 42688815 - 42688843
Alignment:
Q  349 taatatatgtaaggtttgagattcaaacc 377  Q
    |||||||||||||||||||||||||||||    
T  42688815 taatatatgtaaggtttgagattcaaacc 42688843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 3584212 - 3584266
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||||| |||||||||||||||||||||| |||||  ||||||||||||||    
T  3584212 aacttagttggtaaggacaatgcataatatatgcaaggtacgagattcaaacccc 3584266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 40854936 - 40854976
Alignment:
Q  332 ttgataaggacaatgcataatatatgtaaggtttgagattc 372  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  40854936 ttgataaggaaaatgcataatatatgtaaggtttgagattc 40854976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 372
Target Start/End: Original strand, 43982087 - 43982129
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattc 372  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  43982087 agttgataaggacaatgcataatatatgtaaagtttgggattc 43982129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 6384859 - 6384928
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||| |||| ||||||||||||||||||||||| ||||| || | ||| ||||| |||||||||| ||||    
T  6384859 aactcagttaataaggacaatgcataatatatgcaaggtctggggttcgaaccctagacaccaccaaaaa 6384928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 40187689 - 40187620
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||| ||||| || ||||||||||||||||||||||||| || | ||||||||||  |||||||| ||||    
T  40187689 aactcagttggtagggacaatgcataatatatgtaaggtctgcggttcaaaccccgaacaccaccaaaaa 40187620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 379
Target Start/End: Complemental strand, 7388078 - 7388038
Alignment:
Q  339 ggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  7388078 ggacaatgcataatatatgtaaggttcgggattcaaacccc 7388038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 21928171 - 21928119
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||||||||| || |||||||||||||| |||| ||||| |||||||||||||    
T  21928171 aacttagttggtatggacaatgcataatttatgcaaggtctgagattcaaacc 21928119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 375
Target Start/End: Original strand, 34897532 - 34897568
Alignment:
Q  339 ggacaatgcataatatatgtaaggtttgagattcaaa 375  Q
    |||||||||||||||||||||||||||||| ||||||    
T  34897532 ggacaatgcataatatatgtaaggtttgaggttcaaa 34897568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 35142197 - 35142133
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||||||| ||||||||||||||||||| || ||||||| ||| ||||||   ||||||||||||    
T  35142197 agttgatatggacaatgcataatatatgcaaagtttgaggttcgaaccccgaccaccacccaaaa 35142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 376
Target Start/End: Complemental strand, 42227847 - 42227807
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    ||||||||||||||||||||||||||||| ||| |||||||    
T  42227847 taaggacaatgcataatatatgtaaggttcgaggttcaaac 42227807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 46987099 - 46987163
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||| |||||||||||||||||||||| |||||  | | ||| |||||| ||||||||||||||    
T  46987099 agttggtaaggacaatgcataatatatgcaaggtccggggttcgaaccccggacaccacccaaaa 46987163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Complemental strand, 5458119 - 5458072
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||||||||| ||||||||||||||||| ||||| || ||||||||||    
T  5458119 agttgataagaacaatgcataatatatgcaaggtctgggattcaaacc 5458072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 372
Target Start/End: Complemental strand, 10362357 - 10362310
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattc 372  Q
    |||| |||||||||||| ||||||||||||||| |||||| |||||||    
T  10362357 aactcagttgataaggagaatgcataatatatgcaaggttcgagattc 10362310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 379
Target Start/End: Complemental strand, 27279441 - 27279402
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  27279441 gacaatgtataatatatgtaaggtttgaggttcaaacccc 27279402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 364
Target Start/End: Original strand, 34000270 - 34000309
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtt 364  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  34000270 aactcagttgataaggataatgcataatatatgtaaggtt 34000309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Complemental strand, 46659443 - 46659396
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    ||||| || |||||||| |||||||||| |||||||||||||||||||    
T  46659443 agttggtatggacaatgtataatatatgcaaggtttgagattcaaacc 46659396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 360
Target Start/End: Original strand, 8227362 - 8227392
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaa 360  Q
    |||||||||||||||||||||||||||||||    
T  8227362 agttgataaggacaatgcataatatatgtaa 8227392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 15015249 - 15015287
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  15015249 aactcagttgataagaacaatgcataatatatgtaaggt 15015287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 379
Target Start/End: Original strand, 16971020 - 16971058
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  16971020 acaatgtataatatatgtaaggtctgagattcaaacccc 16971058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 376
Target Start/End: Original strand, 36755035 - 36755073
Alignment:
Q  338 aggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  36755035 aggacaatgcataatatatgtaaggttcgggattcaaac 36755073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 376
Target Start/End: Original strand, 36760832 - 36760870
Alignment:
Q  338 aggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  36760832 aggacaatgcataatatatgtaaggttcgggattcaaac 36760870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 372
Target Start/End: Complemental strand, 37451285 - 37451243
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattc 372  Q
    |||||||||||| ||||||||||||||||||||| || |||||    
T  37451285 agttgataaggataatgcataatatatgtaaggtctgggattc 37451243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 2916110 - 2916179
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||| ||||| || ||||||||||||||||||| ||||| || ||||| |||||| |||| |||| ||||    
T  2916110 aactcagttggtacggacaatgcataatatatgcaaggtctgggattcgaaccccggacatcaccaaaaa 2916179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 10236958 - 10236889
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||| ||||| |||| |||||||||||| |||| |||||| ||| ||| |||||| ||||||||| ||||    
T  10236958 aactcagttggtaagaacaatgcataatgtatgcaaggttcgaggttcgaaccccggacaccaccaaaaa 10236889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 366
Target Start/End: Complemental strand, 19684265 - 19684224
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttg 366  Q
    |||| ||||||||  |||||||||||||||||||||||||||    
T  19684265 aactcagttgatatagacaatgcataatatatgtaaggtttg 19684224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Complemental strand, 22777407 - 22777374
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||||||||||||||||||||||| |||||    
T  22777407 agttgataaggacaatgcataatatatgcaaggt 22777374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Complemental strand, 27833449 - 27833416
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    ||||| ||||||||||||||||||||||||||||    
T  27833449 agttggtaaggacaatgcataatatatgtaaggt 27833416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 365
Target Start/End: Original strand, 30059538 - 30059567
Alignment:
Q  336 taaggacaatgcataatatatgtaaggttt 365  Q
    ||||||||||||||||||||||||||||||    
T  30059538 taaggacaatgcataatatatgtaaggttt 30059567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 368
Target Start/End: Original strand, 38454024 - 38454053
Alignment:
Q  339 ggacaatgcataatatatgtaaggtttgag 368  Q
    ||||||||||||||||||||||||||||||    
T  38454024 ggacaatgcataatatatgtaaggtttgag 38454053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 387
Target Start/End: Complemental strand, 39926586 - 39926529
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacacca 387  Q
    |||||||||||||||||||||||||||| || ||| | | |||||||| || ||||||    
T  39926586 agttgataaggacaatgcataatatatgcaatgttcggggttcaaacctcaaacacca 39926529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Complemental strand, 44797390 - 44797361
Alignment:
Q  327 cttagttgataaggacaatgcataatatat 356  Q
    ||||||||||||||||||||||||||||||    
T  44797390 cttagttgataaggacaatgcataatatat 44797361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 45151390 - 45151439
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||| | | |||||||||||||||||||||||| | ||||||||||    
T  45151390 agttgataggaataatgcataatatatgtaaggtttggggttcaaacccc 45151439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Original strand, 48527203 - 48527236
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||||||||||||||||||||||| |||||    
T  48527203 agttgataaggacaatgcataatatatgcaaggt 48527236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 388
Target Start/End: Complemental strand, 14623531 - 14623475
Alignment:
Q  332 ttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||| ||||||||||||| |||||||||||||| | ||||||  |||| ||||||    
T  14623531 ttgatatggacaatgcataaaatatgtaaggtttggggttcaaattccagccaccac 14623475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 18714461 - 18714525
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||| |||||||||||||||||||||| |||||  | | ||||||||||  |||||||| ||||    
T  18714461 agttggtaaggacaatgcataatatatgcaaggtccggggttcaaaccccgtacaccaccaaaaa 18714525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 19793541 - 19793593
Alignment:
Q  337 aaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 389  Q
    |||||||||| |||||||||||||||| || | ||| ||||||| ||||||||    
T  19793541 aaggacaatgtataatatatgtaaggtctggggttcgaaccccaaacaccacc 19793593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 22327697 - 22327749
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||| ||||||||||||||||||||||| ||| |||| || || |||||||||    
T  22327697 taagaacaatgcataatatatgtaaggtctgaaattcgaatccaagacaccac 22327749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 35165541 - 35165593
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||| ||||||||| |||||| ||||||||||||||||| |||| ||| ||||    
T  35165541 aactcagttgataacgacaatacataatatatgtaaggtctgaggttcgaacc 35165593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 366
Target Start/End: Original strand, 38553831 - 38553867
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttg 366  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  38553831 agttggtaagaacaatgcataatatatgtaaggtttg 38553867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 366
Target Start/End: Original strand, 43998588 - 43998624
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttg 366  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  43998588 agttgataaggacaatgcatagtatatgcaaggtttg 43998624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 45096039 - 45096097
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||||||||||||||||||||||| ||||| || | ||| |||||||||||||||    
T  45096039 agttgataaggacaatgcataatatatgcaaggtctgtggttcgaaccccagacaccac 45096097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 55126019 - 55126077
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||||| |||||||| ||||||||||| |||||| ||| |||||||||||||||||||    
T  55126019 agttgatgaggacaatacataatatatgcaaggttcgaggttcaaaccccagacaccac 55126077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 387
Target Start/End: Original strand, 30200839 - 30200896
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacacca 387  Q
    ||||| |||||||||||||||||||||| |||||||||| ||| |||||| |||||||    
T  30200839 agttgctaaggacaatgcataatatatgcaaggtttgaggttcgaaccccggacacca 30200896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 368
Target Start/End: Original strand, 5117221 - 5117259
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgag 368  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  5117221 agttgataaggacaatacataatatatgtaaggtttgag 5117259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 21245803 - 21245853
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||||||| |||||||||||||||||||||||||||| || | ||||||||    
T  21245803 cttagttggtaaggacaatgcataatatatgtaaggtctggggttcaaacc 21245853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 394
Target Start/End: Original strand, 22843487 - 22843541
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||||||||||||||||||||||| | | || |||||||||||||||| |||||    
T  22843487 gacaatgcataatatatgtaaggttcggggttgaaaccccagacaccacacaaaa 22843541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 366
Target Start/End: Original strand, 22462320 - 22462361
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttg 366  Q
    |||| ||||||||||||||||||||||||||||||| |||||    
T  22462320 aactcagttgataaggacaatgcataatatatgtaatgtttg 22462361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 29631199 - 29631263
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||| || ||||||||||||||||||| |||||| | |||||||||||| | ||||||| ||||    
T  29631199 agttggtatggacaatgcataatatatgcaaggttcgggattcaaaccccggccaccaccaaaaa 29631263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 35191865 - 35191809
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacacc 386  Q
    ||||| |||||||||||||||||||||| ||||| || | ||| |||||||||||||    
T  35191865 agttggtaaggacaatgcataatatatgcaaggtctggggttcgaaccccagacacc 35191809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 368
Target Start/End: Original strand, 41822136 - 41822172
Alignment:
Q  332 ttgataaggacaatgcataatatatgtaaggtttgag 368  Q
    |||||||||||||||||||||||||||||| ||||||    
T  41822136 ttgataaggacaatgcataatatatgtaagatttgag 41822172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 366
Target Start/End: Original strand, 45254244 - 45254280
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttg 366  Q
    ||||| |||||||||||||||||||||||||||||||    
T  45254244 agttggtaaggacaatgcataatatatgtaaggtttg 45254280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 48688137 - 48688185
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||||||||||||||||||||||||||| ||| ||| |||| ||||||    
T  48688137 gacaatgcataatatatgtaaggtttgaggttcgaactccagtcaccac 48688185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 376
Target Start/End: Original strand, 40715339 - 40715390
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    |||||||||||||| || |||| ||||||||| |||||||||| ||||||||    
T  40715339 aacttagttgataatgataatgtataatatatataaggtttgatattcaaac 40715390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 364
Target Start/End: Original strand, 53221966 - 53222005
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtt 364  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  53221966 aactcagttgataaggacaatgtataatatatgtaaggtt 53222005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 54230147 - 54230092
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacac 385  Q
    ||||| |||||||||||||||||||||| |||||||| | ||| |||||| |||||    
T  54230147 agttggtaaggacaatgcataatatatgcaaggtttggggttcgaaccccggacac 54230092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 7827516 - 7827554
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  7827516 aactcagttgatatggacaatgcataatatatgtaaggt 7827554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 7829904 - 7829942
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  7829904 aactcagttgatatggacaatgcataatatatgtaaggt 7829942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 364
Target Start/End: Original strand, 31085021 - 31085055
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtt 364  Q
    |||||||||||||| ||||||||||||||||||||    
T  31085021 agttgataaggacagtgcataatatatgtaaggtt 31085055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 43630455 - 43630421
Alignment:
Q  341 acaatgcataatatatgtaaggtttgagattcaaa 375  Q
    |||||||||||||||||||||||||||| ||||||    
T  43630455 acaatgcataatatatgtaaggtttgaggttcaaa 43630421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Complemental strand, 4216447 - 4216414
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||||||||||||||||||||||| |||||    
T  4216447 agttgataaggacaatgcataatatatgcaaggt 4216414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 33404241 - 33404286
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaa 375  Q
    |||||||| ||||||| |||||||||||||| ||||||| ||||||    
T  33404241 agttgatatggacaatacataatatatgtaaagtttgaggttcaaa 33404286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 38573626 - 38573557
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||| |||||||||| ||||||||||||||||  ||||| |  ||||| |||||| ||||||||| ||||    
T  38573626 aactcagttgataagaacaatgcataatatatacaaggtctaggattcgaaccccggacaccaccaaaaa 38573557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 41087581 - 41087614
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaa 360  Q
    |||||||| |||||||||||||||||||||||||    
T  41087581 cttagttggtaaggacaatgcataatatatgtaa 41087614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 53162213 - 53162258
Alignment:
Q  332 ttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||||| ||||||||||||| ||||| |||||||||| ||||||||    
T  53162213 ttgatatggacaatgcataaaatatgcaaggtttgaggttcaaacc 53162258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 385
Target Start/End: Original strand, 2563937 - 2563997
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacac 385  Q
    |||| |||||||||  | |||| ||||||||||||||||| ||| |||||||||| |||||    
T  2563937 aactcagttgataaaaataatgaataatatatgtaaggttcgaggttcaaaccccggacac 2563997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 8075808 - 8075856
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||||||||||||| ||||| |||| |||||||||| | ||||||    
T  8075808 gacaatgcataatatatgcaaggtctgaggttcaaaccccggccaccac 8075856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 8127471 - 8127523
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||| ||||| |||||||||||||||| ||||| |||||||| | ||||||||    
T  8127471 aactcagttggtaaggacaatgcataaaatatgcaaggtttggggttcaaacc 8127523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 366
Target Start/End: Original strand, 14741807 - 14741843
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttg 366  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  14741807 agttggtaaggacaatgcataatatatgcaaggtttg 14741843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 17507747 - 17507683
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||||||  |||||||||||||||||| |||||| | ||||| |||||  | ||||||||||||    
T  17507747 agttgatattgacaatgcataatatatgcaaggttcgggattcgaacccgggccaccacccaaaa 17507683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 364
Target Start/End: Original strand, 26973380 - 26973408
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtt 364  Q
    |||||||||||||||||||||||||||||    
T  26973380 taaggacaatgcataatatatgtaaggtt 26973408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 372
Target Start/End: Complemental strand, 27199464 - 27199428
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattc 372  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  27199464 taaggacaatgtataatatatgtaaggtctgagattc 27199428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 379
Target Start/End: Original strand, 31463510 - 31463546
Alignment:
Q  343 aatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  31463510 aatgcataatatatgtaaggtctgaggttcaaacccc 31463546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 389
Target Start/End: Complemental strand, 39100469 - 39100405
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacc 389  Q
    |||| |||||||||| ||||||||||||||||  |||||||||| ||| |  ||| |||||||||    
T  39100469 aactcagttgataagaacaatgcataatatatacaaggtttgaggttcgatacccggacaccacc 39100405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 364
Target Start/End: Original strand, 41258982 - 41259018
Alignment:
Q  328 ttagttgataaggacaatgcataatatatgtaaggtt 364  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  41258982 ttagttggtaaggacaatgcataatatatgcaaggtt 41259018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 379
Target Start/End: Original strand, 42269320 - 42269359
Alignment:
Q  339 ggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  42269320 ggacaatgcataatatatgtaaggttcgag-ttcaaacccc 42269359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 43334554 - 43334510
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaacccca 380  Q
    ||||||| |||||||||||||  ||||| ||||||||||||||||    
T  43334554 taaggaccatgcataatatatacaaggtctgagattcaaacccca 43334510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 55395366 - 55395322
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaacccca 380  Q
    |||| ||||| |||||||||||||||||||| | |||||||||||    
T  55395366 taagaacaatacataatatatgtaaggtttggggttcaaacccca 55395322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 404171 - 404240
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||||||||| |||||||||||||||||||||| || ||  ||| ||| |||||||||||||||| ||||    
T  404171 aacttagttggtaaggacaatgcataatatatgcaatgtccgaggttcgaaccccagacaccaccaaaaa 404240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 3808160 - 3808108
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||||||||||||||||| |||||  |||||||||||||||| ||||||    
T  3808160 taaggacaatgcataatatatgcaaggtccgagattcaaaccccagccaccac 3808108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 379
Target Start/End: Original strand, 3274016 - 3274063
Alignment:
Q  332 ttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||| |||||||||||||||||||||| |||||||||| |||||||    
T  3274016 ttgatatggacaatgcataatatatgtaaagtttgagatttaaacccc 3274063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 325 - 388
Target Start/End: Complemental strand, 9334033 - 9333970
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||| |||||| |||||||||||||||||||||||||||||| | ||| |||| | ||||||||    
T  9334033 aactcagttgacaaggacaatgcataatatatgtaaggtttggggttcgaacctcggacaccac 9333970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 35110080 - 35110131
Alignment:
Q  343 aatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||| ||||    
T  35110080 aatgcataatatatgtaaggtttgaggttcgaaccccaaacaccaccaaaaa 35110131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 340 - 377
Target Start/End: Complemental strand, 1989081 - 1989044
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  1989081 gacaatgcataatatatgtaaggtttgaggttcaaacc 1989044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 10497194 - 10497145
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacac 385  Q
    ||||||||||||||||||||||||||||||| | ||| || |||||||||    
T  10497194 taaggacaatgcataatatatgtaaggtttgcggttcgaatcccagacac 10497145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 367
Target Start/End: Original strand, 12204382 - 12204419
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttga 367  Q
    |||||||| |||||||||||||||||||||||||||||    
T  12204382 agttgatatggacaatgcataatatatgtaaggtttga 12204419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 24623365 - 24623316
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||| |||||||||||||||||||||||||| | | ||||||||||    
T  24623365 agttgatatggacaatgcataatatatgtaaggttcggggttcaaacccc 24623316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 2617258 - 2617206
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||||||||| ||  ||||||||||||||||||||||||||||| || |||||    
T  2617258 aacttagttggtagagacaatgcataatatatgtaaggtttgaggtttaaacc 2617206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 19554163 - 19554215
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||| ||| |||||||||||||||||| |||||||| ||||| ||||||    
T  19554163 cttagttggtaaagacaatgcataatatatgcaaggtttgtgattcgaacccc 19554215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 29431474 - 29431530
Alignment:
Q  332 ttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||||||||||||||||||| |||||||||| |||| ||| | |||| ||||||||    
T  29431474 ttgataaggacaatgcataatgtatgtaaggtctgaggttcgatccccggacaccac 29431530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 30374574 - 30374522
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||||||||| |||||||||| |||||||| |||||||||| ||| ||||||    
T  30374574 taaggacaatgtataatatatgcaaggtttgggattcaaacctcagccaccac 30374522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Complemental strand, 8138506 - 8138459
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||||||||| ||||||||||||||||||||||| || | ||||||||    
T  8138506 agttgataagaacaatgcataatatatgtaaggtctggggttcaaacc 8138459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 368
Target Start/End: Complemental strand, 15291743 - 15291700
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgag 368  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||    
T  15291743 aacttagttggtaaggacaatgaataatatatgcaaggtttgag 15291700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 377
Target Start/End: Complemental strand, 884120 - 884070
Alignment:
Q  327 cttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||| |||| ||||||||||||| |||||||||||||||||| ||| ||||    
T  884120 cttaattgacaaggacaatgcatgatatatgtaaggtttgaggttcgaacc 884070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 1795004 - 1794966
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  1795004 aactcagttgatatggacaatgcataatatatgtaaggt 1794966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 380
Target Start/End: Complemental strand, 14945561 - 14945511
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccca 380  Q
    ||||||||  |||| |||||||||||||||||||| | |||||||||||||    
T  14945561 agttgatagagacagtgcataatatatgtaaggttcgggattcaaacccca 14945511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 368
Target Start/End: Complemental strand, 28046226 - 28046188
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgag 368  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  28046226 agttgataaagacaatgcataatatatgcaaggtttgag 28046188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 28898864 - 28898902
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  28898864 aacttagttggtaaggacaatgcataatatatgaaaggt 28898902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 377
Target Start/End: Complemental strand, 331924 - 331887
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  331924 gacaatgcataatatatgcaaggtttgggattcaaacc 331887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 9923255 - 9923300
Alignment:
Q  332 ttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||||||||||||||||||||||||  |||||| | ||||||||||    
T  9923255 ttgataaggacaatgcataatatatacaaggttcgggattcaaacc 9923300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Original strand, 18256896 - 18256929
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||||||||||||||||||||||| |||||    
T  18256896 agttgataaggacaatgcataatatatgcaaggt 18256929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 29069496 - 29069545
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaacccc 379  Q
    |||||||| ||||||||||||||||||| || || |||| ||||||||||    
T  29069496 agttgatagggacaatgcataatatatgaaaagtctgaggttcaaacccc 29069545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 31971537 - 31971590
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 378  Q
    |||| ||||| |||||||||||||||||||||| |||||  ||| |||||||||    
T  31971537 aactcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaaccc 31971590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Original strand, 33824894 - 33824927
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||||||||||||||||||||||| |||||    
T  33824894 agttgataaggacaatgcataatatatgcaaggt 33824927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 2692228 - 2692276
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccc 378  Q
    |||||||| ||||||||||||||||||| ||| |  |||||||||||||    
T  2692228 agttgatatggacaatgcataatatatgcaagatccgagattcaaaccc 2692276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 381
Target Start/End: Complemental strand, 3373434 - 3373378
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccag 381  Q
    |||| |||||||| ||||||||||||||||||| ||| |||| ||||| || |||||    
T  3373434 aactcagttgatatggacaatgcataatatatgcaagatttgggattcgaatcccag 3373378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 4826313 - 4826349
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  4826313 gacaatgcataatatatgtaaggttcgaggttcaaac 4826349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 6470669 - 6470633
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaag 361  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  6470669 aactcagttgataaagacaatgcataatatatgtaag 6470633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 6503279 - 6503327
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagaca 384  Q
    |||||| |||| ||||||||||||||||||| | ||||||| |||||||    
T  6503279 taaggataatgtataatatatgtaaggtttggggttcaaactccagaca 6503327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 14169598 - 14169546
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaacc 377  Q
    |||| ||||||||||||||||||| |||||||| ||| |||| | ||||||||    
T  14169598 aactcagttgataaggacaatgcagaatatatgcaagatttggggttcaaacc 14169546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 394
Target Start/End: Complemental strand, 3391 - 3333
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||||||||||||||||| |||||||||  ||||||| |||||| ||||||||| ||||    
T  3391 taaggacaatgcataatagatgtaaggtccgagattcgaaccccggacaccaccaaaaa 3333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1619 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1619
Description:

Target: scaffold1619; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 1054 - 1102
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    |||||||||||||||||| |||||  | |||||||||||||||||||||    
T  1054 gacaatgcataatatatgcaaggtccgggattcaaaccccagacaccac 1102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 376
Target Start/End: Complemental strand, 17824 - 17773
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaac 376  Q
    |||||||||| || ||| ||||||||||||||| |||||||||| |||||||    
T  17824 aacttagttggtagggaaaatgcataatatatgcaaggtttgagtttcaaac 17773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 394
Target Start/End: Complemental strand, 104831 - 104768
Alignment:
Q  331 gttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    ||||||| ||||||||||||| |||   ||||| || |||||||||||||| ||||||||||||    
T  104831 gttgatatggacaatgcataaaatagacaaggtctgggattcaaaccccagccaccacccaaaa 104768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 7010 - 6972
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaa 374  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  7010 taaggacaatacataatatatgtaaggttttagattcaa 6972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 394
Target Start/End: Original strand, 65096 - 65150
Alignment:
Q  340 gacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||||| ||||||||||||||||||| |  ||| |||||||||||||||| ||||    
T  65096 gacaatacataatatatgtaaggtttaacgttcgaaccccagacaccaccaaaaa 65150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 363
Target Start/End: Original strand, 1261 - 1294
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggt 363  Q
    |||||||| |||||||||||||||||||||||||    
T  1261 agttgatatggacaatgcataatatatgtaaggt 1294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 380
Target Start/End: Original strand, 5204 - 5245
Alignment:
Q  339 ggacaatgcataatatatgtaaggtttgagattcaaacccca 380  Q
    ||||||||||||||||||| ||||| |||| |||||||||||    
T  5204 ggacaatgcataatatatgcaaggtctgaggttcaaacccca 5245  T

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Target: scaffold0238 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 25397 - 25466
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||| ||||| |||||||||||||||||||||| |||||    | ||| |||||||||||||||| ||||    
T  25397 aactcagttggtaaggacaatgcataatatatgcaaggtccagggttcgaaccccagacaccaccaaaaa 25466  T

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Target: scaffold1694 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1694
Description:

Target: scaffold1694; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 168 - 232
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||||||| |||||||||||||| |||| ||||| |||| |||||||| | |  |||||||||||    
T  168 agttgatatggacaatgcataatgtatgcaaggtctgaggttcaaacctcggctaccacccaaaa 232  T

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Target: scaffold0426 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 5888 - 5824
Alignment:
Q  330 agttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccacccaaaa 394  Q
    |||||| ||| | |||| |||||||||||||||| || | ||| |||||||||||||||| ||||    
T  5888 agttgaaaagaataatgtataatatatgtaaggtctggggttcgaaccccagacaccaccaaaaa 5824  T

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Target: scaffold0262 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 15972 - 15920
Alignment:
Q  336 taaggacaatgcataatatatgtaaggtttgagattcaaaccccagacaccac 388  Q
    ||||||||||| |||||||||| ||||| || | |||||||||||| ||||||    
T  15972 taaggacaatgtataatatatgcaaggtctggggttcaaaccccagccaccac 15920  T

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Target: scaffold0070 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 42985 - 42925
Alignment:
Q  325 aacttagttgataaggacaatgcataatatatgtaaggtttgagattcaaaccccagacac 385  Q
    |||| |||||||||| | ||||||||||||||| |||||| | ||||| || |||||||||    
T  42985 aactcagttgataagaataatgcataatatatgcaaggttcgggattcgaatcccagacac 42925  T

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