View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19942_low_3 (Length: 473)

Name: NF19942_low_3
Description: NF19942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19942_low_3
NF19942_low_3
[»] chr1 (60 HSPs)
chr1 (59-328)||(47905956-47906224)
chr1 (59-329)||(24325346-24325616)
chr1 (59-328)||(31735846-31736115)
chr1 (59-328)||(9459744-9460013)
chr1 (59-328)||(9463571-9463840)
chr1 (59-329)||(28998574-28998845)
chr1 (59-329)||(29004290-29004561)
chr1 (130-328)||(48664852-48665050)
chr1 (127-330)||(15295238-15295441)
chr1 (59-328)||(27337263-27337532)
chr1 (59-328)||(39931762-39932031)
chr1 (59-329)||(17324957-17325228)
chr1 (59-328)||(27339455-27339730)
chr1 (59-299)||(21948512-21948754)
chr1 (130-329)||(2949617-2949816)
chr1 (136-328)||(4131690-4131882)
chr1 (138-328)||(45693834-45694024)
chr1 (143-328)||(6115532-6115718)
chr1 (140-328)||(6997214-6997395)
chr1 (130-290)||(6996067-6996221)
chr1 (213-328)||(46432521-46432636)
chr1 (59-216)||(46432049-46432207)
chr1 (175-328)||(16561131-16561284)
chr1 (59-206)||(2510649-2510801)
chr1 (162-248)||(11693580-11693666)
chr1 (162-316)||(13785662-13785833)
chr1 (130-194)||(26520516-26520580)
chr1 (162-245)||(14352759-14352842)
chr1 (127-189)||(6115479-6115541)
chr1 (199-316)||(32260748-32260882)
chr1 (162-245)||(10115572-10115653)
chr1 (208-261)||(13112046-13112099)
chr1 (59-108)||(48665082-48665131)
chr1 (245-291)||(10115509-10115555)
chr1 (1-60)||(28207334-28207396)
chr1 (1-96)||(2949499-2949589)
chr1 (250-297)||(16855265-16855312)
chr1 (1-39)||(6115347-6115385)
chr1 (59-96)||(6996021-6996058)
chr1 (1-38)||(17318869-17318906)
chr1 (1-38)||(18307085-18307122)
chr1 (1-38)||(25248782-25248819)
chr1 (1-38)||(31423142-31423179)
chr1 (1-38)||(50079089-50079126)
chr1 (2-38)||(49495468-49495504)
chr1 (59-97)||(42922156-42922194)
chr1 (1-38)||(8347537-8347574)
chr1 (1-38)||(11457743-11457780)
chr1 (251-316)||(11693686-11693751)
chr1 (1-38)||(14183854-14183891)
chr1 (59-108)||(15295169-15295218)
chr1 (1-38)||(18839563-18839600)
chr1 (1-38)||(25251543-25251580)
chr1 (1-38)||(31425287-31425324)
chr1 (1-38)||(31489891-31489928)
chr1 (1-37)||(6822992-6823028)
chr1 (1-37)||(8349316-8349352)
chr1 (1-37)||(17186396-17186432)
chr1 (1-37)||(20302436-20302472)
chr1 (1-60)||(41646871-41646933)
[»] chr3 (43 HSPs)
chr3 (1-328)||(53915760-53916082)
chr3 (59-328)||(746422-746691)
chr3 (7-329)||(1313081-1313397)
chr3 (59-328)||(10621859-10622127)
chr3 (59-328)||(457950-458220)
chr3 (59-328)||(25533107-25533374)
chr3 (59-331)||(455570-455843)
chr3 (1-330)||(53917928-53918252)
chr3 (1-328)||(27635891-27636212)
chr3 (59-326)||(42989954-42990222)
chr3 (59-328)||(51943042-51943311)
chr3 (57-328)||(42991953-42992224)
chr3 (59-332)||(4104216-4104487)
chr3 (59-328)||(41848804-41849082)
chr3 (254-328)||(6561613-6561687)
chr3 (162-245)||(11066346-11066429)
chr3 (173-296)||(54287487-54287627)
chr3 (245-316)||(53974124-53974195)
chr3 (178-243)||(53974011-53974077)
chr3 (178-316)||(11072646-11072801)
chr3 (1-60)||(6561741-6561803)
chr3 (245-316)||(11066257-11066329)
chr3 (1-38)||(1626947-1626984)
chr3 (1-38)||(28137559-28137596)
chr3 (4-60)||(32219026-32219085)
chr3 (1-38)||(3314640-3314677)
chr3 (1-38)||(5927028-5927065)
chr3 (1-38)||(24979663-24979700)
chr3 (288-329)||(27000082-27000123)
chr3 (1-34)||(28100305-28100338)
chr3 (1-34)||(28102266-28102299)
chr3 (1-38)||(28761692-28761729)
chr3 (1-38)||(43423727-43423764)
chr3 (1-38)||(47701859-47701896)
chr3 (1-38)||(51675019-51675056)
chr3 (1-37)||(1321398-1321434)
chr3 (1-37)||(4308545-4308581)
chr3 (6-38)||(6484341-6484373)
chr3 (1-37)||(11163107-11163143)
chr3 (1-37)||(11170361-11170397)
chr3 (1-60)||(15780791-15780853)
chr3 (1-37)||(35777378-35777414)
chr3 (1-60)||(45882870-45882932)
[»] chr7 (64 HSPs)
chr7 (59-328)||(11756925-11757194)
chr7 (59-328)||(20299155-20299424)
chr7 (59-328)||(18345237-18345507)
chr7 (59-328)||(3035415-3035687)
chr7 (59-328)||(38395986-38396256)
chr7 (59-328)||(1606171-1606440)
chr7 (59-328)||(7092498-7092768)
chr7 (59-328)||(31156230-31156500)
chr7 (59-328)||(21470614-21470883)
chr7 (59-328)||(28485261-28485532)
chr7 (59-328)||(1849665-1849935)
chr7 (59-330)||(7351977-7352248)
chr7 (59-328)||(28487249-28487519)
chr7 (59-330)||(21989851-21990121)
chr7 (128-328)||(47865328-47865528)
chr7 (59-328)||(7472303-7472574)
chr7 (59-328)||(38393683-38393952)
chr7 (1-329)||(37412394-37412717)
chr7 (127-328)||(7094814-7095015)
chr7 (59-328)||(7349598-7349867)
chr7 (59-329)||(20625733-20626004)
chr7 (59-329)||(20629624-20629895)
chr7 (59-329)||(20642043-20642314)
chr7 (127-328)||(7470420-7470621)
chr7 (1-328)||(42331265-42331593)
chr7 (127-316)||(24258170-24258358)
chr7 (1-259)||(13099742-13099996)
chr7 (180-328)||(443326-443474)
chr7 (127-329)||(3676996-3677179)
chr7 (59-248)||(43253843-43254035)
chr7 (60-224)||(20297163-20297327)
chr7 (162-330)||(40281824-40281994)
chr7 (162-316)||(10690686-10690845)
chr7 (162-248)||(12310442-12310528)
chr7 (265-316)||(20297110-20297161)
chr7 (59-96)||(443528-443565)
chr7 (1-38)||(39146253-39146290)
chr7 (245-311)||(12310542-12310608)
chr7 (1-38)||(4296201-4296238)
chr7 (1-38)||(7188529-7188566)
chr7 (59-108)||(7470345-7470394)
chr7 (1-38)||(11355244-11355281)
chr7 (1-38)||(20137375-20137412)
chr7 (1-38)||(21678052-21678089)
chr7 (1-38)||(21680013-21680050)
chr7 (1-38)||(24465535-24465572)
chr7 (274-315)||(43254023-43254064)
chr7 (250-282)||(6628852-6628884)
chr7 (251-291)||(12485044-12485084)
chr7 (251-291)||(12506475-12506515)
chr7 (250-282)||(12657667-12657699)
chr7 (1-60)||(27306495-27306557)
chr7 (201-248)||(12484976-12485023)
chr7 (201-248)||(12506407-12506454)
chr7 (2-60)||(22392434-22392495)
chr7 (1-60)||(26804534-26804592)
chr7 (127-156)||(443461-443490)
chr7 (59-108)||(3677201-3677250)
chr7 (59-108)||(7094745-7094794)
chr7 (1-38)||(22828899-22828936)
chr7 (1-38)||(24258449-24258486)
chr7 (1-37)||(44551-44587)
chr7 (1-37)||(1049561-1049597)
chr7 (1-37)||(31156177-31156213)
[»] chr5 (43 HSPs)
chr5 (59-328)||(18468698-18468967)
chr5 (59-328)||(25803707-25803976)
chr5 (59-328)||(27910135-27910405)
chr5 (59-328)||(27912219-27912490)
chr5 (59-328)||(3373360-3373630)
chr5 (1-326)||(18511478-18511800)
chr5 (59-308)||(10586549-10586799)
chr5 (59-328)||(15551925-15552195)
chr5 (59-328)||(26097421-26097693)
chr5 (127-325)||(18509706-18509904)
chr5 (1-328)||(26098517-26098841)
chr5 (5-330)||(18596324-18596656)
chr5 (145-331)||(21288526-21288713)
chr5 (59-248)||(18466453-18466640)
chr5 (176-321)||(17415748-17415893)
chr5 (224-329)||(6661929-6662034)
chr5 (130-248)||(15143262-15143373)
chr5 (249-328)||(40221282-40221361)
chr5 (127-195)||(40221340-40221408)
chr5 (245-312)||(5779144-5779211)
chr5 (274-328)||(18466411-18466465)
chr5 (274-329)||(15143219-15143274)
chr5 (175-248)||(32520241-32520316)
chr5 (1-38)||(17072859-17072896)
chr5 (1-65)||(21288710-21288777)
chr5 (1-38)||(25904079-25904116)
chr5 (1-38)||(40221498-40221535)
chr5 (59-96)||(41586025-41586062)
chr5 (1-60)||(2818602-2818664)
chr5 (247-282)||(2532750-2532785)
chr5 (162-216)||(6661594-6661648)
chr5 (1-58)||(34530932-34530992)
chr5 (1-38)||(20507728-20507765)
chr5 (1-38)||(31472879-31472916)
chr5 (1-60)||(36208531-36208594)
chr5 (1-38)||(36402594-36402631)
chr5 (1-38)||(41585972-41586009)
chr5 (1-60)||(6661448-6661510)
chr5 (1-60)||(12556189-12556251)
chr5 (1-37)||(20043027-20043063)
chr5 (1-37)||(20044987-20045023)
chr5 (1-37)||(25921739-25921775)
chr5 (1-37)||(31542712-31542748)
[»] chr4 (51 HSPs)
chr4 (59-328)||(22132718-22132987)
chr4 (59-328)||(22134949-22135219)
chr4 (59-328)||(5100743-5101011)
chr4 (59-329)||(17662557-17662827)
chr4 (59-328)||(14787752-14788021)
chr4 (59-330)||(56030187-56030458)
chr4 (59-329)||(24347958-24348228)
chr4 (59-330)||(44600157-44600430)
chr4 (127-312)||(30136331-30136516)
chr4 (328-473)||(44692618-44692763)
chr4 (178-330)||(47211158-47211310)
chr4 (128-329)||(9022059-9022252)
chr4 (127-329)||(38890517-38890702)
chr4 (127-328)||(10112626-10112815)
chr4 (127-221)||(19322547-19322641)
chr4 (174-328)||(9863499-9863650)
chr4 (59-200)||(53404998-53405141)
chr4 (227-326)||(19322410-19322510)
chr4 (162-248)||(54929094-54929180)
chr4 (162-316)||(38209098-38209257)
chr4 (169-248)||(10979676-10979755)
chr4 (257-328)||(14789500-14789571)
chr4 (59-108)||(18709490-18709539)
chr4 (59-108)||(47211065-47211114)
chr4 (250-312)||(5516771-5516833)
chr4 (335-419)||(44636412-44636496)
chr4 (186-245)||(29609838-29609897)
chr4 (1-60)||(47274732-47274794)
chr4 (206-248)||(14647172-14647214)
chr4 (374-472)||(44654120-44654217)
chr4 (1-38)||(19095912-19095949)
chr4 (1-38)||(24446845-24446882)
chr4 (245-314)||(29609914-29609983)
chr4 (1-38)||(33415753-33415790)
chr4 (1-38)||(37313332-37313369)
chr4 (1-60)||(22801128-22801190)
chr4 (1-60)||(22803000-22803062)
chr4 (1-60)||(40091681-40091743)
chr4 (1-60)||(48486324-48486386)
chr4 (2-60)||(619714-619775)
chr4 (247-294)||(54929198-54929245)
chr4 (1-38)||(2891347-2891384)
chr4 (1-38)||(3937475-3937512)
chr4 (1-38)||(15032802-15032839)
chr4 (1-38)||(19322727-19322764)
chr4 (1-38)||(36378322-36378359)
chr4 (1-38)||(38928444-38928481)
chr4 (1-38)||(56030474-56030511)
chr4 (1-37)||(5198451-5198487)
chr4 (199-243)||(5516703-5516747)
chr4 (1-37)||(44600104-44600140)
[»] chr8 (36 HSPs)
chr8 (59-331)||(15808959-15809231)
chr8 (59-328)||(28283544-28283813)
chr8 (59-328)||(43529871-43530140)
chr8 (59-329)||(3873749-3874022)
chr8 (59-328)||(41384493-41384761)
chr8 (1-327)||(41382420-41382742)
chr8 (127-328)||(608470-608671)
chr8 (170-328)||(32339094-32339252)
chr8 (211-328)||(3265635-3265752)
chr8 (59-177)||(181434-181553)
chr8 (162-248)||(11701364-11701447)
chr8 (59-108)||(32339272-32339321)
chr8 (59-108)||(24873506-24873555)
chr8 (174-245)||(13986214-13986285)
chr8 (247-316)||(13986304-13986372)
chr8 (1-60)||(15072717-15072779)
chr8 (1-38)||(1225198-1225235)
chr8 (1-38)||(5623004-5623041)
chr8 (1-38)||(14419457-14419494)
chr8 (1-38)||(27107163-27107200)
chr8 (1-38)||(27911047-27911084)
chr8 (1-38)||(27957466-27957503)
chr8 (247-316)||(30679186-30679254)
chr8 (1-38)||(35872644-35872681)
chr8 (1-38)||(37214476-37214513)
chr8 (1-37)||(25952554-25952590)
chr8 (1-37)||(26775234-26775270)
chr8 (1-38)||(13858750-13858787)
chr8 (1-38)||(21480546-21480583)
chr8 (247-276)||(27820149-27820178)
chr8 (1-38)||(33541654-33541691)
chr8 (1-38)||(36865570-36865607)
chr8 (1-37)||(3886184-3886220)
chr8 (1-37)||(14477309-14477345)
chr8 (1-37)||(14807784-14807820)
chr8 (1-37)||(44720876-44720912)
[»] scaffold0154 (1 HSPs)
scaffold0154 (59-329)||(11792-12062)
[»] scaffold0005 (3 HSPs)
scaffold0005 (59-328)||(51709-51978)
scaffold0005 (257-328)||(50159-50230)
scaffold0005 (206-248)||(170076-170118)
[»] chr6 (29 HSPs)
chr6 (59-328)||(12195834-12196104)
chr6 (59-328)||(2629209-2629479)
chr6 (127-328)||(5275727-5275928)
chr6 (59-331)||(30034926-30035199)
chr6 (59-328)||(30966923-30967193)
chr6 (59-329)||(26932889-26933159)
chr6 (59-329)||(18317750-18318021)
chr6 (127-329)||(19704964-19705166)
chr6 (1-330)||(17852265-17852590)
chr6 (131-326)||(17011781-17011973)
chr6 (127-328)||(22858343-22858536)
chr6 (162-326)||(20526548-20526708)
chr6 (162-248)||(30445318-30445404)
chr6 (162-248)||(30443111-30443195)
chr6 (245-306)||(30445243-30445304)
chr6 (250-316)||(30443024-30443092)
chr6 (1-60)||(15532947-15533009)
chr6 (1-60)||(15541406-15541468)
chr6 (1-38)||(13057205-13057242)
chr6 (1-38)||(15719665-15719702)
chr6 (1-38)||(24338714-24338751)
chr6 (1-38)||(25477285-25477322)
chr6 (1-38)||(32447582-32447619)
chr6 (3-38)||(22490650-22490685)
chr6 (1-38)||(3390390-3390427)
chr6 (1-38)||(15346402-15346439)
chr6 (1-30)||(19704835-19704864)
chr6 (5-38)||(30729098-30729131)
chr6 (1-37)||(12195781-12195817)
[»] chr2 (30 HSPs)
chr2 (59-328)||(23452560-23452829)
chr2 (59-330)||(42452447-42452719)
chr2 (59-328)||(42923830-42924094)
chr2 (59-329)||(35218296-35218566)
chr2 (59-328)||(35215915-35216184)
chr2 (127-328)||(27583713-27583907)
chr2 (127-316)||(28568556-28568738)
chr2 (199-330)||(27136368-27136507)
chr2 (162-312)||(15693589-15693755)
chr2 (233-321)||(34575608-34575696)
chr2 (177-248)||(39286971-39287042)
chr2 (127-223)||(34575528-34575617)
chr2 (170-316)||(41303457-41303621)
chr2 (253-316)||(28568348-28568411)
chr2 (162-247)||(7502638-7502723)
chr2 (169-248)||(41304806-41304884)
chr2 (1-38)||(17849069-17849106)
chr2 (1-38)||(19007592-19007629)
chr2 (1-38)||(37963193-37963230)
chr2 (250-291)||(39286911-39286952)
chr2 (1-60)||(6264411-6264473)
chr2 (1-60)||(40032324-40032386)
chr2 (264-315)||(7502582-7502633)
chr2 (1-38)||(11739826-11739863)
chr2 (1-38)||(31733031-31733068)
chr2 (1-38)||(34979845-34979882)
chr2 (1-60)||(22287602-22287664)
chr2 (1-37)||(22874095-22874131)
chr2 (1-37)||(24162478-24162514)
chr2 (1-37)||(45280251-45280287)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-328)||(78883-79207)
[»] scaffold0511 (1 HSPs)
scaffold0511 (59-329)||(1734-2005)
[»] scaffold0133 (1 HSPs)
scaffold0133 (180-328)||(4546-4694)
[»] scaffold0468 (2 HSPs)
scaffold0468 (213-327)||(2070-2184)
scaffold0468 (127-185)||(2022-2080)
[»] scaffold1674 (1 HSPs)
scaffold1674 (234-328)||(1-95)
[»] scaffold0008 (1 HSPs)
scaffold0008 (175-245)||(57836-57905)
[»] scaffold0533 (1 HSPs)
scaffold0533 (250-291)||(2232-2273)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-60)||(3957-4019)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-38)||(79844-79881)
[»] scaffold0224 (1 HSPs)
scaffold0224 (59-97)||(16137-16175)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-37)||(6185-6221)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-37)||(2866-2902)


Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 47906224 - 47905956
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaa 158  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||         |||||||| |||||||||||||||||||||||    
T  47906224 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatactttttttttctccttcaatgaaagaatatttgcatcaaaaa 47906126  T
Q  159 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47906125 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatat 47906026  T
Q  259 ttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  47906025 ttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 47905956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 59 - 329
Target Start/End: Complemental strand, 24325616 - 24325346
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||          |||||||||||||||||||||||||||||||    
T  24325616 tatatttatagtaaaagtataactcataaatttggaacaaataccacactaaa-gatacatttttttttctccttcagtgaaagaatatttgcatcaaaa 24325518  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24325517 atataatattcactttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatata 24325418  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  24325417 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacaa 24325346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 31735846 - 31736115
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  31735846 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 31735944  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31735945 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 31736044  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| |||||||||||    
T  31736045 tttgaaacaaatcttttatatttttagcaacaatattctccttccatcaaattttgagtcatactacaaca 31736115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 9459744 - 9460013
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| | || |||||          |||||||| ||||||||||||||||||||||    
T  9459744 tatatttatagtaaaagtataactcataaatttggaacaaataccacaatgaa-gatacgtttttttttctccttcaatgaaagaatatttgcatcaaaa 9459842  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9459843 atataatattccctttcaaaatatatttgcattaaattgttcttcatacggtataaaaatatatttattgtccataaatatattttcagcacaaaatata 9459942  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  9459943 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 9460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 9463571 - 9463840
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| | || |||||          |||||||| ||||||||||||||||||||||    
T  9463571 tatatttatagtaaaagtataactcataaatttggaacaaataccacaatgaa-gatacgtttttttttctccttcaatgaaagaatatttgcatcaaaa 9463669  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  9463670 atataatattccctttcaaaatatatttgcattaaattgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatata 9463769  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  9463770 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 9463840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 59 - 329
Target Start/End: Original strand, 28998574 - 28998845
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||           ||||||||||||||||||||||||||||||    
T  28998574 tatatttatagtaaaagtataactcataaatttggaacgaataccacactaaat-atacggtttttttttctccttcagtgaaagaatatttgcatcaaa 28998672  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28998673 aatataatattccctttcaaaatatatttgcatcaaatatttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaatat 28998772  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    |||| |||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  28998773 attttaaacaaatcttttatagttttagcaacaatattctccatccatcaaattttgagtcatactacaacaa 28998845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 59 - 329
Target Start/End: Original strand, 29004290 - 29004561
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||           ||||||||||||||||||||||||||||||    
T  29004290 tatatttatagtaaaagtataactcataaatttggaacgaataccacactaaat-atacggtttttttttctccttcagtgaaagaatatttgcatcaaa 29004388  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29004389 aatataatattccctttcaaaatatatttgcatcaaatatttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaatat 29004488  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    |||| |||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  29004489 attttaaacaaatcttttatagttttagcaacaatattctccatccatcaaattttgagtcatactacaacaa 29004561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 130 - 328
Target Start/End: Complemental strand, 48665050 - 48664852
Alignment:
Q  130 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtc 229  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48665050 cttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatgtgcatcaaatcgttcttcatacggtacaaaaatatatttattgtc 48664951  T
Q  230 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  48664950 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 48664852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 127 - 330
Target Start/End: Original strand, 15295238 - 15295441
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15295238 ctccttcagtgaaagaatatttgcatcaaaaatataatattcgctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 15295337  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||| |||||||||    
T  15295338 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 15295437  T
Q  327 caat 330  Q
    ||||    
T  15295438 caat 15295441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 27337263 - 27337532
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnct-ccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||| |  |||||||          | |||||||| ||||||||||||||||||||    
T  27337263 tatatttatagtaaaagtataacgcataaatttggaacaaataccaca-tcgaagatacgtttttttttttccttcagttaaagaatatttgcatcaaaa 27337361  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27337362 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 27337461  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||| |||||||| ||||||||||||| ||| ||||||||||| |||| |||||||||||    
T  27337462 tttgaaacaaatcttatatatttttagcaacaatattccccatccatcaaatttggagtcatactacaaca 27337532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 39932031 - 39931762
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    |||||||||||||||  |||||||||||||||||||||  |||| ||||| || |||||          |||||||| | ||||||||||||||||||||    
T  39932031 tatatttatagtaaacatataactcataaatttggaacgaatactacactgaa-gatacgtttttttttctccttcaataaaagaatatttgcatcaaaa 39931933  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39931932 gtataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 39931833  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  39931832 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 39931762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 59 - 329
Target Start/End: Original strand, 17324957 - 17325228
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||  ||| ||| || || |||||           |||||||||||||||||||||||||| |||    
T  17324957 tatatttatagtaaaagtataactcataaatttggaacgaatatcaccctgaa-gatacgttttttttttctccttcagtgaaagaatatttgcataaaa 17325055  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  17325056 aatataatattcccttgcaaaatatatttgcatcaaatcgtttttcatacggtacaaaaatatatttattgtccataaatatattttcaactcaaaatat 17325155  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  17325156 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacaa 17325228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 27339455 - 27339730
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnct---ccttcagtgaaagaatatttgcatcaa 155  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |   |||||||||||||||||||||||||||    
T  27339455 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttcttttttttttccttcagtgaaagaatatttgcatcaa 27339553  T
Q  156 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataa----atatattttcagcacaa 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    |||||||||||||||||    
T  27339554 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatatattttcagcacaa 27339653  T
Q  252 aatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||| |||||||||||    
T  27339654 aatatatttgaaacaaatcttttatatttttagcaacaatattctccatccgtcaaatttggagtcatactacaaca 27339730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 59 - 299
Target Start/End: Original strand, 21948512 - 21948754
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaa 155  Q
    |||||||||||||||  |||||||||||||||||||||  |||||||||| || |||||            ||||||| |||||||||||||||||||||    
T  21948512 tatatttatagtaaacatataactcataaatttggaacgaataccacactgaa-gatacgttttttttttcctccttctgtgaaagaatatttgcatcaa 21948610  T
Q  156 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaata 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21948611 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaata 21948710  T
Q  256 tatttgaaacaaatcttttatattttcagcaacaatattctcca 299  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  21948711 tatttgaaacaaatcttttatatttttagcaacaatattctcca 21948754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 130 - 329
Target Start/End: Original strand, 2949617 - 2949816
Alignment:
Q  130 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtc 229  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  2949617 cttcagtgaaagaatatttgtatcaaaaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacaatacaaaaatatatttattgtc 2949716  T
Q  230 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||| ||||||||||| |||||| |||||    
T  2949717 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatgaaattttgagtcatactataacaa 2949816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 136 - 328
Target Start/End: Original strand, 4131690 - 4131882
Alignment:
Q  136 tgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt-gtccataa 234  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4131690 tgaaagaatatttgcatcaaaa-tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatttgtccataa 4131788  T
Q  235 atatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  4131789 atatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 4131882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 138 - 328
Target Start/End: Original strand, 45693834 - 45694024
Alignment:
Q  138 aaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaata 237  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45693834 aaagaatatttgcataaaaaatatattattctctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaata 45693933  T
Q  238 tattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||||    
T  45693934 tatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgaatcatagtacaaca 45694024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 143 - 328
Target Start/End: Original strand, 6115532 - 6115718
Alignment:
Q  143 atatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattt 242  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||    
T  6115532 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcattcatacgatacaaaaatatatttattgtccataaatatattt 6115631  T
Q  243 tcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa-ttttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| || ||||||||    
T  6115632 tcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttttgagtcatcctacaaca 6115718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 140 - 328
Target Start/End: Complemental strand, 6997395 - 6997214
Alignment:
Q  140 agaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatata 239  Q
    ||||||||||||||||||||||||||||| |||||||      |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  6997395 agaatatttgcatcaaaaatataatattctctttcaa------tttgcatcaaatcgttcttcatacggtataaaaatatatttattgtccataa-tata 6997303  T
Q  240 ttttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||| ||||    
T  6997302 tttttagcacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatactataaca 6997214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 130 - 290
Target Start/End: Complemental strand, 6996221 - 6996067
Alignment:
Q  130 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtc 229  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||      ||| ||||||||||||||||||||||||||||||||||| |||||||    
T  6996221 cttcagtgaaagaatatttgcaacaaaaatataatattccctttcaa------tttacatcaaatcgttcttcatacggtacaaaaatatatgtattgtc 6996128  T
Q  230 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaa 290  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  6996127 cataaatatattttcagcacaaaatatatttgaaacaagtcttttatatttttagcaacaa 6996067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 213 - 328
Target Start/End: Original strand, 46432521 - 46432636
Alignment:
Q  213 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatttt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  46432521 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 46432620  T
Q  313 gagtgatactacaaca 328  Q
    |||| |||||||||||    
T  46432621 gagtcatactacaaca 46432636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 46432049 - 46432207
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| | || |||||           ||||||||||||||||||||||||||||||    
T  46432049 tatatttatagtaaaagtataactcataaatttggaacaaataccacagtgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 46432147  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46432148 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaa 46432207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 175 - 328
Target Start/End: Complemental strand, 16561284 - 16561131
Alignment:
Q  175 aaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatctttt 274  Q
    ||||||||||||  ||||||  | |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  16561284 aaaatatatttgtttcaaatattccttcatacggtacaaaaagatatttattgtcaataaatatattttcagcacaaaatatatttgaaacaaatatttt 16561185  T
Q  275 atattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||| |||||||||||||| || ||| |||||||||| | |||| ||||||    
T  16561184 atatttttagcaacaatattcttcatccaacaaattttgaatcatacaacaaca 16561131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 59 - 206
Target Start/End: Original strand, 2510649 - 2510801
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnct------ccttcagtgaaagaatatttgcat 152  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||         ||      ||||||||||||||||||||||||    
T  2510649 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaaa-atacgttttttttctttccctccttcagtgaaagaatatttgcat 2510747  T
Q  153 caaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatac 206  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2510748 caaaaatataatattctctttcaaaatatatttgcatcaaatcgttcttcatac 2510801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 11693580 - 11693666
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11693580 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgtccataaatatattttcagca 11693666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 162 - 316
Target Start/End: Original strand, 13785662 - 13785833
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcag--------------- 246  Q
    |||||||| ||| ||||||||||||||||||||| | ||||||||| |||||||||||||||| | || ||||||||||||||||                   
T  13785662 aatattccttttaaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctaga 13785761  T
Q  247 --cacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 316  Q
      ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||||| ||||||||    
T  13785762 aacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccatccatcaatttttgagt 13785833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 26520516 - 26520580
Alignment:
Q  130 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 194  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26520516 cttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 26520580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 14352842 - 14352759
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca 245  Q
    |||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| | | ||||||||||||||||    
T  14352842 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttactattcataaatatattttca 14352759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 6115479 - 6115541
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 189  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6115479 ctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 6115541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 199 - 316
Target Start/End: Complemental strand, 32260882 - 32260748
Alignment:
Q  199 cttcatacggtacaaaaatatatttattgtccataaatatattttcagca-----------------caaaatatatttgaaacaaatcttttatatttt 281  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||                 |||||||||||| |||||| |||||||||||||    
T  32260882 cttcatacggtacaaaaatatatttattgttcataaatatattttcagcaacaatcttctgaaaacacaaaatatattttaaacaattcttttatatttt 32260783  T
Q  282 cagcaacaatattctccaaccatcaaattttgagt 316  Q
     ||||||||| |||| || ||||||||||||||||    
T  32260782 tagcaacaatcttcttcatccatcaaattttgagt 32260748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 10115653 - 10115572
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca 245  Q
    |||||||| ||| ||||||||||||||||||||  | |||||||||| | ||||  ||||||||||||||||||||||||||||    
T  10115653 aatattccgtttaaaaatatatttgcatcaaatattccttcatacgggataaaa--atatttattgtccataaatatattttca 10115572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 13112046 - 13112099
Alignment:
Q  208 gtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttg 261  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||    
T  13112046 gtacaaaaatatatttattgtccatgaatatattttcagcataaaatacatttg 13112099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 48665131 - 48665082
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacact 108  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  48665131 tatatttatagtaaaagtataactcataaatttggaacaaatactacact 48665082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 10115555 - 10115509
Alignment:
Q  245 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaat 291  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||    
T  10115555 agcacaaaatatatttgaaacaaatcttttatatttttaacaacaat 10115509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28207334 - 28207396
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  28207334 ctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 28207396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2949499 - 2949589
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagtattcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaac 96  Q
    |||||||||||||||||||||||| ||||||||||||     ||  ||  |  || | ||||||||| ||||||||||||||||||||||||||||    
T  2949499 ctaaacccttgtttcagccccctctatctcaaggttt-----tctcggattcaatatctatatttattgtaaaagtataactcataaatttggaac 2949589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 16855265 - 16855312
Alignment:
Q  250 aaaatatatttgaaacaaatcttttatattttcagcaacaatattctc 297  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||||    
T  16855265 aaaatatatttgaaacaaatcttttatattttctgcatcaatcttctc 16855312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6115347 - 6115385
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttag 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  6115347 ctaaacccttgtttcagccccctctatctcaaggtttag 6115385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 6996021 - 6996058
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaac 96  Q
    |||||||||| |||||||||||||||||||||||||||    
T  6996021 tatatttataataaaagtataactcataaatttggaac 6996058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17318906 - 17318869
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  17318906 ctaaacccttgtttcagccccctctatctcaaggttta 17318869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18307122 - 18307085
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  18307122 ctaaacccttgtttcagccccctctatctcaaggttta 18307085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25248782 - 25248819
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  25248782 ctaaacccttgtttcagccccctctatctcaaggttta 25248819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31423142 - 31423179
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  31423142 ctaaacccttgtttcagccccctctatctcaaggttta 31423179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 50079089 - 50079126
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  50079089 ctaaacccttgtttcagccccctctatctcaaggttta 50079126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 49495468 - 49495504
Alignment:
Q  2 taaacccttgtttcagccccctccatctcaaggttta 38  Q
    ||||||||||||||||||||||| |||||||||||||    
T  49495468 taaacccttgtttcagccccctctatctcaaggttta 49495504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 97
Target Start/End: Complemental strand, 42922194 - 42922156
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaaca 97  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  42922194 tatatttatagtaaaagtatccctcataaatttggaaca 42922156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8347537 - 8347574
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  8347537 ctaaacccttgtttcaaccccctctatctcaaggttta 8347574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 11457743 - 11457780
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  11457743 ctaaaccattgtttcagccccctctatctcaaggttta 11457780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 11693686 - 11693751
Alignment:
Q  251 aaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 316  Q
    |||||||||| |||||||  ||||||| ||| ||||| ||| |||| || ||||||||||||||||    
T  11693686 aaatatatttaaaacaaaatttttataattttagcaataatcttcttcatccatcaaattttgagt 11693751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14183854 - 14183891
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  14183854 ctaaacccttgtttcagccctctctatctcaaggttta 14183891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 15295169 - 15295218
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacact 108  Q
    |||||||||||||||  ||||||||||||||| |||||  ||||||||||    
T  15295169 tatatttatagtaaacatataactcataaattaggaacgaataccacact 15295218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18839600 - 18839563
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  18839600 ctaaacccttgtttcagccccctctatctcatggttta 18839563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25251543 - 25251580
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  25251543 ctaaacctttgtttcagccccctctatctcaaggttta 25251580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31425287 - 31425324
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||  |||||||||||||    
T  31425287 ctaaacccttgtttcagccccctttatctcaaggttta 31425324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31489928 - 31489891
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  31489928 ctaaacccttgtttcaaccccctctatctcaaggttta 31489891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6823028 - 6822992
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  6823028 ctaaacccttgtttcagccccctctatctcaaagttt 6822992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8349316 - 8349352
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  8349316 ctaaacccttgtttcagccctctctatctcaaggttt 8349352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17186396 - 17186432
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  17186396 ctaaacccttatttcagccccctctatctcaaggttt 17186432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 20302472 - 20302436
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  20302472 ctaaacccttgtttcagccccctctatctcaaagttt 20302436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41646933 - 41646871
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||| ||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  41646933 ctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 41646871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 206; Significance: 1e-112; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 53915760 - 53916082
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaaca 97  Q
    |||||||||||||||||||||||| |||| |||||||| |   ||||||||||||||||||||        ||||||||||||||||||||||||||||     
T  53915760 ctaaacccttgtttcagccccctctatcttaaggtttactctgattcaaggtctatatttata--------gtaaaagtataactcataaatttggaacg 53915851  T
Q  98 gataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcg 196  Q
     |||||||||| || |||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53915852 aataccacactcaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcg 53915950  T
Q  197 ttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattct 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  53915951 ttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattct 53916050  T
Q  297 ccaaccatcaaattttgagtgatactacaaca 328  Q
    ||| || ||||||||||||| |||||||||||    
T  53916051 ccatccctcaaattttgagtcatactacaaca 53916082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 746691 - 746422
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  746691 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 746593  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  746592 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 746493  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  746492 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 746422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 7 - 329
Target Start/End: Complemental strand, 1313397 - 1313081
Alignment:
Q  7 ccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaacagatacc 103  Q
    |||||||||||||||||| ||||||||||||| |   ||||||||||||||||||||        ||||||||||||||||||||||||||||  ||| |    
T  1313397 ccttgtttcagccccctctatctcaaggtttactctgattcaaggtctatatttata--------gtaaaagtataactcataaatttggaacgaatatc 1313306  T
Q  104 acactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttca 203  Q
    |||||||| |||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1313305 acactaaa-gatactttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttca 1313207  T
Q  204 tacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaacca 303  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||    
T  1313206 tacggtacagaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcatttatatttttagcaacaatattctccatcca 1313107  T
Q  304 tcaaattttgagtgatactacaacaa 329  Q
    ||||||||||||| ||||||||||||    
T  1313106 tcaaattttgagtcatactacaacaa 1313081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 10621859 - 10622127
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaa 158  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||         ||||||||||||||||||||||||||||||||    
T  10621859 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttttttttctccttcagtgaaagaatatttgcatcaaaaa 10621957  T
Q  159 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  10621958 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatat 10622057  T
Q  259 ttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  10622058 ttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 10622127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 458220 - 457950
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  458220 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 458122  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  458121 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatat 458022  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||| |||||||||||    
T  458021 atttgaaacaaatcttttatatttttagcaacaatattccccatccatcaaattttgagtcatactacaaca 457950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 25533374 - 25533107
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaa 158  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| |||||| || |||||         ||||||||||||||||||||||||||||||||    
T  25533374 tatatttatagtaaaagtataactcataaatttagaacaaatatcacactgaa-gatacgttttttt-ctccttcagtgaaagaatatttgcatcaaaaa 25533277  T
Q  159 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25533276 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcaaaaaatatat 25533177  T
Q  259 ttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  25533176 ttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 25533107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 59 - 331
Target Start/End: Complemental strand, 455843 - 455570
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||| || |||||           ||||||||||||||||||||||||||||||    
T  455843 tatatttatagtaaaagtataactcataaatttggaacaaataccgcactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 455745  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  455744 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatat 455645  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaatt 331  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||| ||||||||||||||    
T  455644 atttgaaacaaatcttttatatttttagcaacaatattccccatccatcaaattttgagtcatactacaacaatt 455570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 53917928 - 53918252
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaaca 97  Q
    ||||||| |||||||||||||||||||||||||||||| |   ||||||||||||||||||||        |||||||||||||||||||||||| |||     
T  53917928 ctaaaccattgtttcagccccctccatctcaaggtttaatctgattcaaggtctatatttata--------gtaaaagtataactcataaatttgaaacg 53918019  T
Q  98 gataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcg 196  Q
     |||||||||| || |||||          |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53918020 aataccacactgaa-gatacgtttttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcg 53918118  T
Q  197 ttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattct 296  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  53918119 ttcttcatacggtaaaaaaatatatttattgtccataaatatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattct 53918218  T
Q  297 ccaaccatcaaattttgagtgatactacaacaat 330  Q
    ||| |||||||||||||||| |||||| ||||||    
T  53918219 ccatccatcaaattttgagtcatactataacaat 53918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 27635891 - 27636212
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaaca 97  Q
    |||||||||||||||||||||||| ||||||||||||| |   ||||||||||||||||| ||      ||  |||| |||||||||||||||||||||     
T  27635891 ctaaacccttgtttcagccccctctatctcaaggtttactctaattcaaggtctatatttgtag-----ta--aaaaatataactcataaatttggaacg 27635983  T
Q  98 gataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgt 197  Q
     |||||||||| || |||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27635984 aataccacactgaa-gatacattttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgt 27636081  T
Q  198 tcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctc 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  27636082 tcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaactaatattttatatttttagcaacaatattctc 27636181  T
Q  298 caaccatcaaattttgagtgatactacaaca 328  Q
    || |||||||||||| | | |||||||||||    
T  27636182 catccatcaaattttaaatcatactacaaca 27636212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 59 - 326
Target Start/End: Complemental strand, 42990222 - 42989954
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  42990222 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacattttttttttctccttcagtgaaagaatatttgcatcaaa 42990124  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  42990123 aatataatattctctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatactttcagcaaaaaatat 42990024  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 326  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||    
T  42990023 atttgaaacaaattttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 42989954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 51943311 - 51943042
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||| || |||||          |||||||| ||||||||||||| ||||||||    
T  51943311 tatatttatagtaaaagtataaatcataaatttggaacgaataccacactgaa-gatacgtttttctttctccttcaatgaaagaatatttacatcaaaa 51943213  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51943212 atataatattccctttcaaaatatatttgcatcaaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 51943113  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||||||||| |||||||||||    
T  51943112 tttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatactacaaca 51943042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 57 - 328
Target Start/End: Complemental strand, 42992224 - 42991953
Alignment:
Q  57 tatatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaa 155  Q
    |||||||||||||||||||||||||||||||||||||||   |||  ||||| || |||||          |||||||||||||||||||||||||||||    
T  42992224 tatatatttatagtaaaagtataactcataaatttggaattaatattacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaa 42992126  T
Q  156 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaata 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  42992125 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaata 42992026  T
Q  256 tatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||| |||||||||||| | ||||||||||||||| |||||||||||||||| |||||||||||    
T  42992025 tatttgaaacaaaccttttatatttttaacaacaatattctccatccatcaaattttgagtcatactacaaca 42991953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 59 - 332
Target Start/End: Original strand, 4104216 - 4104487
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    |||||           |||||||||||||||||||||||||| |||    
T  4104216 tatatttatagtaaaagtataactcataaatttggaacaaataccacact----gatacgttttttttttctccttcagtgaaagaatatttgcataaaa 4104311  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||    
T  4104312 aatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcataaagtat 4104411  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaattc 332  Q
    ||||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||| |||||||||||||||    
T  4104412 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaacaattc 4104487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 41849082 - 41848804
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatac----------nnnnnnnnnctccttcagtgaaagaatattt 148  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||                   ||| |||||| |||||||||||    
T  41849082 tatatttatagtaaaagtataactcataaatttggaacaaataccacact-gaagatacgttttttttttttttttttctctttcagttaaagaatattt 41848984  T
Q  149 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41848983 gcatcaaaaatataatattccttttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagca 41848884  T
Q  249 caaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  41848883 caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 41848804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 6561687 - 6561613
Alignment:
Q  254 tatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| |||| |||||||||||    
T  6561687 tatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaatttcgagtcatactacaaca 6561613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 11066429 - 11066346
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca 245  Q
    ||||||| |||| ||||||||||||||||||||  | ||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  11066429 aatattctctttaaaaatatatttgcatcaaatattccttcatatggtaaaaaaatatatttattgtccataaatgtattttca 11066346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 54287487 - 54287627
Alignment:
Q  173 tcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca-----------------gcacaaaata 255  Q
    ||||||||||||||||||||||  | |||||||| |||||||||| |||||||| ||||||||||||||||||                 |||| |||||    
T  54287487 tcaaaatatatttgcatcaaatattccttcatacagtacaaaaatgtatttattatccataaatatattttcaacagcaatcttttggaagcacgaaata 54287586  T
Q  256 tatttgaaacaaatcttttatattttcagcaacaatattct 296  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  54287587 tatttgaaacaaatcttttatatttttagcaacaatcttct 54287627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 53974124 - 53974195
Alignment:
Q  245 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 316  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||| ||||| || ||||||||||||||||    
T  53974124 agcacaaaatataattgaaacaaatcttttatatttttaacaacaacattcttcatccatcaaattttgagt 53974195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 53974011 - 53974077
Alignment:
Q  178 atatatttgcatcaaatcgttctt-catacggtacaaaaatatatttattgtccataaatatatttt 243  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||    
T  53974011 atatatttgcatcaaatcttcctttcatacggtacaaaaatatatttattgtctataaatatatttt 53974077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 178 - 316
Target Start/End: Complemental strand, 11072801 - 11072646
Alignment:
Q  178 atatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttc-----------------agcacaaaatatattt 260  Q
    |||||||||||||||||| | | | ||||||||||||||| ||||| |||||||||||| |||||||                 ||||||| ||||||||    
T  11072801 atatatttgcatcaaatcttccgtaatacggtacaaaaatctatttgttgtccataaatgtattttcagcaacaatcttctggaagcacaagatatattt 11072702  T
Q  261 gaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 316  Q
    |||||||||| ||||||||||  |||||||| |||| || ||||||||||||||||    
T  11072701 gaaacaaatcatttatattttttgcaacaatcttcttcatccatcaaattttgagt 11072646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6561803 - 6561741
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||||||||| |   || |||||||||||||||||    
T  6561803 ctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaggtctatatttata 6561741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 11066329 - 11066257
Alignment:
Q  245 agcacaaaatatatttgaaacaaatcttttat-attttcagcaacaatattctccaaccatcaaattttgagt 316  Q
    ||||||| |||||||||||||||||| |||||  |||| |||||||||||||| || |||||||||| |||||    
T  11066329 agcacaagatatatttgaaacaaatcatttatcttttttagcaacaatattcttcatccatcaaattatgagt 11066257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 1626947 - 1626984
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  1626947 ctaaacccttgtttcagccccctctatctcaaggttta 1626984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28137559 - 28137596
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  28137559 ctaaacccttgtttcagccccctctatctcaaggttta 28137596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 32219085 - 32219026
Alignment:
Q  4 aacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    ||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  32219085 aacccttgtttcagccccctctatctcaaagtttagtcagatacaaggtctatatttata 32219026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3314677 - 3314640
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  3314677 ctaaacccttatttcagccccctctatctcaaggttta 3314640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5927028 - 5927065
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  5927028 ctaaacccttgtttcagccctctctatctcaaggttta 5927065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24979700 - 24979663
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  24979700 ctaaacccttgtttcagccccctctatctcaaagttta 24979663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 27000123 - 27000082
Alignment:
Q  288 caatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    |||||||||||| |||||||||||| ||| ||||||||||||    
T  27000123 caatattctccatccatcaaattttcagtcatactacaacaa 27000082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28100305 - 28100338
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaagg 34  Q
    |||||||||||||||||||||||| |||||||||    
T  28100305 ctaaacccttgtttcagccccctctatctcaagg 28100338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28102266 - 28102299
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaagg 34  Q
    |||||||||||||||||||||||| |||||||||    
T  28102266 ctaaacccttgtttcagccccctctatctcaagg 28102299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28761692 - 28761729
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  28761692 ctaaacccttgtttcaaccccctctatctcaaggttta 28761729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43423727 - 43423764
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  43423727 ctaaacccttgtttcagccccctctttctcaaggttta 43423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 47701859 - 47701896
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||  |||||||||||||    
T  47701859 ctaaacccttgtttcagccccctttatctcaaggttta 47701896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 51675019 - 51675056
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  51675019 ctaaacccttgtttcagccccctctatctcaacgttta 51675056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1321434 - 1321398
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  1321434 ctaaacccttgtttcagccccctctatctcaaagttt 1321398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4308545 - 4308581
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  4308545 ctaaacccttgtttcagccccctctatctcaaagttt 4308581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 6484373 - 6484341
Alignment:
Q  6 cccttgtttcagccccctccatctcaaggttta 38  Q
    ||||||||||||||||||| |||||||||||||    
T  6484373 cccttgtttcagccccctctatctcaaggttta 6484341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11163143 - 11163107
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  11163143 ctaaacccttgtttcagccccctctatctcaaagttt 11163107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11170397 - 11170361
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  11170397 ctaaacccttgtttcagccccctctatctcaaagttt 11170361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15780853 - 15780791
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||| | ||||| |   || |||||||||||||||||    
T  15780853 ctaaacccttgtttcagccccctctatctccaagtttactctgatacaaggtctatatttata 15780791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35777414 - 35777378
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  35777414 ctaaacccttgtttcagccccctctatctcaaagttt 35777378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 45882932 - 45882870
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||  ||||| |   || |||||||||||||||||    
T  45882932 ctaaacccttgtttcagccccctctatctcatagtttactatgatacaaggtctatatttata 45882870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 11757194 - 11756925
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  11757194 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 11757096  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11757095 atataatattccctttcaaaatatatttgcatcaaatagttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 11756996  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  11756995 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 11756925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 20299424 - 20299155
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  20299424 tatatttatagtaaaagtataactcataaatatggaacaaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 20299326  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20299325 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 20299226  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  20299225 tttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 20299155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 18345507 - 18345237
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  18345507 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 18345409  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  18345408 aatataatattccatttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtcaataaatatatttttagcacaaaatat 18345309  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  18345308 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 18345237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 3035687 - 3035415
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnct----ccttcagtgaaagaatatttgcatca 154  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||         ||    ||||||||||||||||||||||||||    
T  3035687 tatatttatagtaaaagtataactcataaatttggaacaaataccatactgaa-gatacgttttttttctttctccttcagtgaaagaatatttgcatca 3035589  T
Q  155 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaat 254  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3035588 aaaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaat 3035489  T
Q  255 atatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  3035488 atatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 3035415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 38396256 - 38395986
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  || |||||           ||||||||||||||||||||||||||||||    
T  38396256 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 38396158  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  38396157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtacataaatatattttcagcacaaaatat 38396058  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| |||||||||||    
T  38396057 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatactacaaca 38395986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 1606440 - 1606171
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||| |          |||||||||||||||||||||||||||||||    
T  1606440 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gattcgtttttttttctccttcagtgaaagaatatttgcatcaaaa 1606342  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1606341 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatata 1606242  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||| |||||||||||    
T  1606241 tttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaca 1606171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 7092498 - 7092768
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    |||||||||||||||  |||||||||||||||||||||  |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  7092498 tatatttatagtaaacatataactcataaatttggaacgaataccacactgaa-gatacaattttttttcctccttcagtgaaagaatatttgcatcaaa 7092596  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  7092597 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaaaatat 7092696  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  7092697 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 7092768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 31156230 - 31156500
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||| || ||| |           ||||||||||||||||||||||||||||||    
T  31156230 tatatttatagtaaaagtatagctcataaatttggaacaaataccacactgaa-gattcgttttttttttctccttcagtgaaagaatatttgcatcaaa 31156328  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31156329 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatat 31156428  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||||||    
T  31156429 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaaca 31156500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 21470614 - 21470883
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  || |||||          |||||||||||||||||||||||||||||||    
T  21470614 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 21470712  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  21470713 atataatattccctttcaaaatatattcgcatcaaatcgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatata 21470812  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| | |||||||||    
T  21470813 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcaaactacaaca 21470883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 28485532 - 28485261
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaa 155  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||            ||||||| |||||||||||||||||||||    
T  28485532 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgtgttttttttcctccttcggtgaaagaatatttgcatcaa 28485434  T
Q  156 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaata 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28485433 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaata 28485334  T
Q  256 tatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||| ||||||||||| |||||||||||||| || |||||||||||||| | |||||||||||    
T  28485333 tatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaaattttgaatcatactacaaca 28485261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 1849935 - 1849665
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||| |           |||||||||||||||||||| |||||||||    
T  1849935 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gattcgttttttttttctccttcagtgaaagaatatctgcatcaaa 1849837  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1849836 aatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 1849737  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||| |||||||||||    
T  1849736 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaca 1849665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 59 - 330
Target Start/End: Original strand, 7351977 - 7352248
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||          ||| |||||||||||||||||||| ||||||    
T  7351977 tatatttatagtaaaagtataactcataaatttggaacaaatatcacactgaa-gatacgtttttttttctcattcagtgaaagaatatttgcctcaaaa 7352075  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7352076 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatata 7352175  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaat 330  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||||||||    
T  7352176 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaacaat 7352248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 28487519 - 28487249
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||| ||||||||||||||||||||| ||||| |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  28487519 tatatttataggaaaagtataactcataaatttagaacaaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 28487421  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28487420 aatataatattccctttcaaaatatatttgcatcaaatcattcttcatacgatacaaaattatatttattgtccataaatatattttcagcacaaaatat 28487321  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  28487320 atttgaagcaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 28487249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 59 - 330
Target Start/End: Complemental strand, 21990121 - 21989851
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||| | |||||||           ||||||||||||||||||||||||||||||    
T  21990121 tatatttatagtaaaattataactcataaatttggaacgaataccacac-agaagatacgtttttttttcctccttcagtgaaagaatatttgcatcaaa 21990023  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||    
T  21990022 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca--acacaatat 21989925  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaat 330  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||||||||||    
T  21989924 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgggtcatactacaacaat 21989851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 128 - 328
Target Start/End: Complemental strand, 47865528 - 47865328
Alignment:
Q  128 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattg 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  47865528 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattg 47865429  T
Q  228 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaac 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||||||    
T  47865428 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatactacaac 47865329  T
Q  328 a 328  Q
    |    
T  47865328 a 47865328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 7472303 - 7472574
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaa 155  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||| || |||||            |||||||| ||||||||||||||||||||    
T  7472303 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaa-gatacgtttttttttttctccttcaatgaaagaatatttgcatcaa 7472401  T
Q  156 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaata 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  7472402 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaataatatatttattgtccataaatatattttcagcacaaaata 7472501  T
Q  256 tatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  7472502 tatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 7472574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 38393952 - 38393683
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          | |||||||||||||||||||||||||||||    
T  38393952 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttattttttcaccttcagtgaaagaatatttgcatcaaaa 38393854  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38393853 atataacattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaataaattttcagcacaaaatata 38393754  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| || | |||||||||||    
T  38393753 tttgaaacaaatcttatatatttttagcaacaatattctccatccatcaaatttagaatcatactacaaca 38393683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 37412394 - 37412717
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaaca 97  Q
    |||||||||||||||||||||||  ||||| ||||||| |   ||||||||||||||||||||        |||||| |||||||||||||||||||||     
T  37412394 ctaaacccttgtttcagccccctatatctccaggtttactctgattcaaggtctatatttata--------gtaaaaatataactcataaatttggaacg 37412485  T
Q  98 gataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcg 196  Q
     ||| |||||| || |||||          ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37412486 aataacacactgaa-gatacgtttttttttctccttcagtggaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatca 37412584  T
Q  197 ttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattct 296  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37412585 ttcttcatacgttacataattatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattct 37412684  T
Q  297 ccaaccatcaaattttgagtgatactacaacaa 329  Q
    ||| |||||||||||||||| ||||||||||||    
T  37412685 ccatccatcaaattttgagtcatactacaacaa 37412717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 127 - 328
Target Start/End: Original strand, 7094814 - 7095015
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7094814 ctccttcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 7094913  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||    
T  7094914 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 7095013  T
Q  327 ca 328  Q
    ||    
T  7095014 ca 7095015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 7349598 - 7349867
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||          ||| |||||||||||||||||||| ||||||    
T  7349598 tatatttatagtaaaagtataactcataaatttggaacaaatatcacactgaa-gatacgtttttttttctcattcagtgaaagaatatttgcctcaaaa 7349696  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7349697 atataatattctctttcaaaatatatttgcatcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatata 7349796  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||||||    
T  7349797 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaaca 7349867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 59 - 329
Target Start/End: Complemental strand, 20626004 - 20625733
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatac--nnnnnnnnnctccttcagtgaaagaatatttgcatcaaa 156  Q
    |||||||||| ||||  |||||||||||||||||||||  ||||||||||  |||||||           |||||||||||||| |||||||||||||||    
T  20626004 tatatttataataaacatataactcataaatttggaacgaataccacact-gaagatacgtttttttttgctccttcagtgaaaaaatatttgcatcaaa 20625906  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20625905 aatataatattccctttcaaaatatatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 20625806  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||| |||||    
T  20625805 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactagaacaa 20625733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 59 - 329
Target Start/End: Complemental strand, 20629895 - 20629624
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatac--nnnnnnnnnctccttcagtgaaagaatatttgcatcaaa 156  Q
    |||||||||| ||||  |||||||||||||||||||||  ||||||||||  |||||||           |||||||||||||| |||||||||||||||    
T  20629895 tatatttataataaacatataactcataaatttggaacgaataccacact-gaagatacgtttttttttgctccttcagtgaaaaaatatttgcatcaaa 20629797  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20629796 aatataatattccctttcaaaatatatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 20629697  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||| |||||    
T  20629696 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactagaacaa 20629624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 59 - 329
Target Start/End: Complemental strand, 20642314 - 20642043
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatac--nnnnnnnnnctccttcagtgaaagaatatttgcatcaaa 156  Q
    |||||||||| ||||  |||||||||||||||||||||  ||||||||||  |||||||           |||||||||||||| |||||||||||||||    
T  20642314 tatatttataataaacatataactcataaatttggaacgaataccacact-gaagatacgtttttttttgctccttcagtgaaaaaatatttgcatcaaa 20642216  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20642215 aatataatattccctttcaaaatatatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 20642116  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||| |||||    
T  20642115 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactagaacaa 20642043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 127 - 328
Target Start/End: Original strand, 7470420 - 7470621
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7470420 ctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 7470519  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 326  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||| |||||||||    
T  7470520 gtccataaatatattttcagcacaaaatatatttgaaacaaatgttttatatttttagcaataatattctccatccatcaaattttgagtcatactacaa 7470619  T
Q  327 ca 328  Q
    ||    
T  7470620 ca 7470621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 42331265 - 42331593
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaaca 97  Q
    |||||||||||||||||||||||| ||||||| |||||||   || ||| |||||||||||||        ||||||||||||||||||||||||||||     
T  42331265 ctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttata--------gtaaaagtataactcataaatttggaacg 42331356  T
Q  98 gataccacactaaaagatacnnnnnnnnn-------ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatc 190  Q
     ||||||||||||| |||||                |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42331357 aataccacactaaa-gatacgtttttttttttctttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatc 42331455  T
Q  191 aaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaa 290  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  42331456 aaatcgttcttcatacggtacaaaaatatacttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatatttttagcaacaa 42331555  T
Q  291 tattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||| ||  ||||||||||| ||| |||||||||||    
T  42331556 tattcttcattcatcaaattttaagtcatactacaaca 42331593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 127 - 316
Target Start/End: Complemental strand, 24258358 - 24258170
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||    
T  24258358 ctccttcagtgaaagaatatttacatcaaaaatataatattccctttcaaaatatatttgcatcaa-tcgtccttcatactgtacaaaaatatatttatt 24258260  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  ||||||||||||||||    
T  24258259 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagt 24258170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 13099742 - 13099996
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaaca 97  Q
    |||||||||||||||| ||||||| ||||||||||||| |   ||||||||||||||||||||        ||||||||||||||||||||||||||||     
T  13099742 ctaaacccttgtttcaaccccctctatctcaaggtttactttgattcaaggtctatatttata--------gtaaaagtataactcataaatttggaacg 13099833  T
Q  98 gataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatc 195  Q
     |||||||||| || |||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13099834 aataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgtatcaaatc 13099932  T
Q  196 gttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatt 259  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13099933 gttcttcatacggtacgaaaatatatttattgtccataaatatattttcagcacaaaatatatt 13099996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 180 - 328
Target Start/End: Complemental strand, 443474 - 443326
Alignment:
Q  180 atatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 279  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  443474 atatttgcatcaaattgttcttcagacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 443375  T
Q  280 ttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    || ||||||||||||||||| |||||||||||||||| |||||||||||    
T  443374 tttagcaacaatattctccatccatcaaattttgagtcatactacaaca 443326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 127 - 329
Target Start/End: Complemental strand, 3677179 - 3676996
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  3677179 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatat------- 3677087  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 326  Q
                ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| |||||||||    
T  3677086 ------------attttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatctatcaaattttgagtcatactacaa 3676999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 59 - 248
Target Start/End: Original strand, 43253843 - 43254035
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn----ctccttcagtgaaagaatatttgcatca 154  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  || |||||             ||||||||||||||||||||||||||||    
T  43253843 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaa-gatactttcttattttttctccttcagtgaaagaatatttgcatca 43253941  T
Q  155 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  43253942 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagca 43254035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 60 - 224
Target Start/End: Complemental strand, 20297327 - 20297163
Alignment:
Q  60 atatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaa 158  Q
    |||||| ||||||||||||||||| ||||||||||||| |||||||||| || |||||          ||||||| ||||||||||||||||||||||||    
T  20297327 atatttttagtaaaagtataactcgtaaatttggaacaaataccacactgaa-gatacgtttttttttctccttcggtgaaagaatatttgcatcaaaaa 20297229  T
Q  159 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatattta 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20297228 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatattta 20297163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 162 - 330
Target Start/End: Original strand, 40281824 - 40281994
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttg 261  Q
    |||||||| ||| |||||||||  | |||||||  |  ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  40281824 aatattccttttaaaaatatatccgtatcaaatattctttcatacggtacaaaaatatatttattttccataaatatattttcaacacaaaatatatttg 40281923  T
Q  262 aaacaaatcttttatattttcagcaacaa--tattctccaaccatcaaattttgagtgatactacaacaat 330  Q
    |||||||| ||||||||||| ||||||||  | |||| || |||||||||||||||| |||||||| ||||    
T  40281924 aaacaaatattttatatttttagcaacaaattcttcttcatccatcaaattttgagtcatactacaccaat 40281994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 162 - 316
Target Start/End: Complemental strand, 10690845 - 10690686
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttct-tcatacggtacaaaaatatatttattgtccataa------atatattttcagcacaaaat 254  Q
    |||||||| ||| ||||||||||||||||||||  |||| ||| | |||||||||||||||||||||| |||||      || | ||   ||||||||||    
T  10690845 aatattccttttaaaaatatatttgcatcaaata-ttctgtcacatggtacaaaaatatatttattgtacataagcaacaattttttgaaagcacaaaat 10690747  T
Q  255 atatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 316  Q
    |||||||||||| | |||||||||||| ||||||||| ||||||  ||||||||||||||||    
T  10690746 atatttgaaacata-cttttatatttttagcaacaatcttctccctccatcaaattttgagt 10690686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 12310442 - 12310528
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    |||||||| ||| ||||||||||| ||||||||| | |||||||||||||||||||||||| | ||||| ||| |||| ||||||||    
T  12310442 aatattccttttaaaaatatatttacatcaaatcttccttcatacggtacaaaaatatattaactgtccttaagtataatttcagca 12310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 20297161 - 20297110
Alignment:
Q  265 caaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 316  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  20297161 caaatcttttatatttttagcaacaatattctccatccatcaaattttgagt 20297110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 443565 - 443528
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaac 96  Q
    ||||||||||||||||||||||||||||||||||||||    
T  443565 tatatttatagtaaaagtataactcataaatttggaac 443528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 39146253 - 39146290
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39146253 ctaaacccttgtttcagccccctccatctcaaggttta 39146290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 12310542 - 12310608
Alignment:
Q  245 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattt 311  Q
    ||||||||||||||||||||||||||||||||||    ||||||||| |||| || |||| ||||||    
T  12310542 agcacaaaatatatttgaaacaaatcttttatatcagtagcaacaatcttcttcatccattaaattt 12310608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4296201 - 4296238
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  4296201 ctaaacccttgtttcagccccctctatctcaaggttta 4296238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7188566 - 7188529
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  7188566 ctaaacccttgtttcagccccctctatctcaaggttta 7188529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 7470345 - 7470394
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacact 108  Q
    |||||||||||||||  |||||||||||||||||||||  ||||||||||    
T  7470345 tatatttatagtaaacatataactcataaatttggaacgaataccacact 7470394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11355281 - 11355244
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  11355281 ctaaacccttgtttcagccccctctatctcaaggttta 11355244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20137375 - 20137412
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  20137375 ctaaacccttgtttcagccccctctatctcaaggttta 20137412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21678089 - 21678052
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  21678089 ctaaacccttgtttcagccccctctatctcaaggttta 21678052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21680050 - 21680013
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  21680050 ctaaacccttgtttcagccccctctatctcaaggttta 21680013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24465572 - 24465535
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  24465572 ctaaacccttgtttcagccccctctatctcaaggttta 24465535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 43254023 - 43254064
Alignment:
Q  274 tatattttcagcaacaatattctccaaccatcaaattttgag 315  Q
    |||||||| ||||||||||||||||| |||||||||||||||    
T  43254023 tatatttttagcaacaatattctccatccatcaaattttgag 43254064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 6628884 - 6628852
Alignment:
Q  250 aaaatatatttgaaacaaatcttttatattttc 282  Q
    |||||||||||||||||||||||||||||||||    
T  6628884 aaaatatatttgaaacaaatcttttatattttc 6628852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 12485044 - 12485084
Alignment:
Q  251 aaatatatttgaaacaaatcttttatattttcagcaacaat 291  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  12485044 aaatatatttgaaacaaatcttttatattttctacaacaat 12485084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 12506475 - 12506515
Alignment:
Q  251 aaatatatttgaaacaaatcttttatattttcagcaacaat 291  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  12506475 aaatatatttgaaacaaatcttttatattttctacaacaat 12506515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 12657667 - 12657699
Alignment:
Q  250 aaaatatatttgaaacaaatcttttatattttc 282  Q
    |||||||||||||||||||||||||||||||||    
T  12657667 aaaatatatttgaaacaaatcttttatattttc 12657699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27306495 - 27306557
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  27306495 ctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 27306557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 12484976 - 12485023
Alignment:
Q  201 tcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    ||||||| |||||||||||||||  | |||||||||||||||||||||    
T  12484976 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12485023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 12506407 - 12506454
Alignment:
Q  201 tcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    ||||||| |||||||||||||||  | |||||||||||||||||||||    
T  12506407 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12506454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 22392495 - 22392434
Alignment:
Q  2 taaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    ||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  22392495 taaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 22392434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26804592 - 26804534
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagtattcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| ||||| |   |||||||||||||||||    
T  26804592 ctaaacccttgtttcagccccctctatctcaaagtttact-cacaaggtctatatttata 26804534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 443490 - 443461
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||    
T  443490 ctccttcagtgaaagaatatttgcatcaaa 443461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 3677250 - 3677201
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacact 108  Q
    ||||||||||||||||  ||||||||||||||||||||  ||| ||||||    
T  3677250 tatatttatagtaaaaacataactcataaatttggaacgaatatcacact 3677201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 7094745 - 7094794
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacact 108  Q
    |||||||||| ||||  |||||||||||||||||||||  ||||||||||    
T  7094745 tatatttataataaacatataactcataaatttggaacgaataccacact 7094794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22828899 - 22828936
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  22828899 ctaaactcttgtttcagccccctctatctcaaggttta 22828936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24258486 - 24258449
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  24258486 ctaaacccttgtttcagccccctctatctcaatgttta 24258449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44587 - 44551
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  44587 ctaaacccttgtttcagccccctctatctcaaagttt 44551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1049561 - 1049597
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  1049561 ctaaacccttgtttcagccccctctatctcaaagttt 1049597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31156177 - 31156213
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  31156177 ctaaacccttgtttcagccccctctatctcaaagttt 31156213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 18468967 - 18468698
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  18468967 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatactttttattttctccttcagtgaaagaatatttgcatcaaaa 18468869  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18468868 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 18468769  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||||||||    
T  18468768 tttgaaacaaatcttttatatttttagcaaaaatattctccatccatcaaattttgagtcatactacaaca 18468698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 25803976 - 25803707
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||  ||||| || |||||          |||||||||||||||||||||||||||||||    
T  25803976 tatatttatagtaaaagtataactcataaatttggaacaaatattacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 25803878  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25803877 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 25803778  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  25803777 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 25803707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 27910405 - 27910135
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  27910405 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatactttttttttttctccttcagtgaaagaatatttgcatcaaa 27910307  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27910306 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 27910207  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||||||||    
T  27910206 atttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatactacaaca 27910135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 27912490 - 27912219
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaa 155  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||            |||||||||||||||||||||||||||||    
T  27912490 tatatttatagtaaaagtataactcataaatttggaacaaatatcacactgaa-gatacgtttttttttttctccttcagtgaaagaatatttgcatcaa 27912392  T
Q  156 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaata 255  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27912391 aaatataatattccctttcaaaatatatttgcatcaaatcgtttttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaata 27912292  T
Q  256 tatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  27912291 tatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 27912219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 3373360 - 3373630
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||           |||||||||||||| |||||||||||||||    
T  3373360 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttttttttttctccttcagtgaaaaaatatttgcatcaaa 3373458  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3373459 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatat 3373558  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||||    
T  3373559 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattctgagtcatactacaaca 3373630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 18511478 - 18511800
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctc--aaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaa 95  Q
    |||||||||||||||||||||||| |||||  || |||||||   || ||||||||||||||||||        ||||  ||||||||||||||||||||    
T  18511478 ctaaacccttgtttcagccccctctatctctcaaagtttagtctgatacaaggtctatatttatat--------taaacatataactcataaatttggaa 18511569  T
Q  96 cagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 194  Q
    |  ||||||||||||| |||||          ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18511570 cgaataccacactaaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatatttcctttcaaaatatatttgcatcaaat 18511668  T
Q  195 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatatt 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  18511669 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaacaaatcttttatatttttagcaacaatatt 18511768  T
Q  295 ctccaaccatcaaattttgagtgatactacaa 326  Q
    || || |||||||||||||||| |||||||||    
T  18511769 cttcatccatcaaattttgagtcatactacaa 18511800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 59 - 308
Target Start/End: Complemental strand, 10586799 - 10586549
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  10586799 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 10586701  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10586700 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 10586601  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 308  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| ||||||||    
T  10586600 atttgaaacaaatcttttatatttttagcaacaatattccccatccatcaaa 10586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 15552195 - 15551925
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||           ||||||||||||||||||||||||||||||    
T  15552195 tatatttatagtaaaagtataactcataaatttggaacaaataccacgctgaa-gatacgttttttttttctccttcagtgaaagaatatttgcatcaaa 15552097  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  15552096 aatgtcatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatat 15551997  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  15551996 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 15551925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 26097693 - 26097421
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| || |||||           ||||||||||||||||||||||||||||||    
T  26097693 tatatttatagtaaaagtataactcataaatttggaacgaataccacactgaa-gatacatttttttttcctccttcagtgaaagaatatttgcatcaaa 26097595  T
Q  157 aatataatattccctt--tcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaat 254  Q
    ||||||| ||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26097594 aatataacatttccttcttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtacaaaat 26097495  T
Q  255 atatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  26097494 atatttgaaacaaattttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 26097421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 127 - 325
Target Start/End: Original strand, 18509706 - 18509904
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18509706 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacggtacaaaaatatatttatt 18509805  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactaca 325  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  18509806 gtccataaatatattttcagcacaaaatatattcgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactaca 18509904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 26098517 - 26098841
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaaca 97  Q
    |||||||||| ||||||||||||| ||||| ||||||| |   ||||||||||||||||||||        |||||||||||||||||||| |||||||     
T  26098517 ctaaacccttatttcagccccctctatctccaggtttactctgattcaaggtctatatttata--------gtaaaagtataactcataaaattggaacg 26098608  T
Q  98 gataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 194  Q
     |||||||| | || |||||            |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26098609 aataccacattgaa-gatacgtttttttatttctccttcaatgaaagaatttttgtatcaaaaatataatattccctttcaaaatatatttgcatcaaat 26098707  T
Q  195 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatatt 294  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  26098708 cgttctttatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaataatatt 26098807  T
Q  295 ctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||| |||||||||||||||| |||||||||||    
T  26098808 ctccatccatcaaattttgagtcatactacaaca 26098841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 5 - 330
Target Start/End: Complemental strand, 18596656 - 18596324
Alignment:
Q  5 acccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaacagata 101  Q
    |||||||||||||||||||| ||| ||||||||| |   ||||||||||||||||||||        ||||||||||||||||||||||||||||  |||    
T  18596656 acccttgtttcagccccctctatcccaaggtttactctgattcaaggtctatatttata--------gtaaaagtataactcataaatttggaacgaata 18596565  T
Q  102 ccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttc 199  Q
    ||||||| || |||||           |||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18596564 ccacactgaa-gatacgttttttttttctccttcagtgatagaatatttgtatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttc 18596466  T
Q  200 ttcatacggtacaaaaatatatttat-----------tgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaac 288  Q
    || |||||||||||||||||||||||           |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  18596465 tttatacggtacaaaaatatatttatggtatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaac 18596366  T
Q  289 aatattctccaaccatcaaattttgagtgatactacaacaat 330  Q
    ||||||||||| |||||||||||||||| ||| |||||||||    
T  18596365 aatattctccatccatcaaattttgagtcatagtacaacaat 18596324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 145 - 331
Target Start/End: Complemental strand, 21288713 - 21288526
Alignment:
Q  145 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtaca-aaaatatatttattgtccataaatatatttt 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  21288713 atttgcatcaaaaatataatattccctttcaaaatatatttgcataaaatcgttcttcatacggtaccgaaaatatatttattgtccataaatatatttt 21288614  T
Q  244 cagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaatt 331  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  21288613 cagcacaaaatatattttaaacaaatcttttttatttttagcaacaatattctccatccatcaaattttgagttatactacaacaatt 21288526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 59 - 248
Target Start/End: Complemental strand, 18466640 - 18466453
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaa 158  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||| || |||||         |||||| |||||||||||||||||||||||||    
T  18466640 tatatttatagtaaaaatataactcataaatttggaacaaataccacactgaa-gatactttttttt-ctcctttagtgaaagaatatttgcatcaaaaa 18466543  T
Q  159 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  18466542 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagca 18466453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 176 - 321
Target Start/End: Original strand, 17415748 - 17415893
Alignment:
Q  176 aaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatctttta 275  Q
    |||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17415748 aaatatatttgcatcaaattttccttcatacagtacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatctttta 17415847  T
Q  276 tattttcagcaacaatattctccaaccatcaaattttgagtgatac 321  Q
    |||||| |||||||||||||| || |||||||||||||||| ||||    
T  17415848 tatttttagcaacaatattcttcatccatcaaattttgagtcatac 17415893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 224 - 329
Target Start/End: Original strand, 6661929 - 6662034
Alignment:
Q  224 attgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatacta 323  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| || ||||||| |||| ||| ||||||    
T  6661929 attgtccataaatatattttcaacacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaagttttaagtcatacta 6662028  T
Q  324 caacaa 329  Q
    ||||||    
T  6662029 caacaa 6662034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 15143373 - 15143262
Alignment:
Q  130 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtc 229  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||    
T  15143373 cttcagtgaaagaatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaatcttccttcatatggtacaaaaatgtatttattgtc 15143281  T
Q  230 cataaatatattttcagca 248  Q
    |||||||||||||| ||||    
T  15143280 cataaatatatttttagca 15143262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 249 - 328
Target Start/End: Complemental strand, 40221361 - 40221282
Alignment:
Q  249 caaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| || | || ||||||||||| |||||||||||    
T  40221361 caaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatcaattaaattttgagtcatactacaaca 40221282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 40221408 - 40221340
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatc 195  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  40221408 ctcctgcagtgaaagaatatttgcatcaaaaatataatattccttttcaaaatatatttgaaacaaatc 40221340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 5779144 - 5779211
Alignment:
Q  245 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatttt 312  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||| |||| || | ||||||||||    
T  5779144 agcacaaaatatatttgaaacaaatcttttatatttttagcaataatcttcttcatctatcaaatttt 5779211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 18466465 - 18466411
Alignment:
Q  274 tatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  18466465 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 18466411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 15143274 - 15143219
Alignment:
Q  274 tatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    |||||||| ||||||||||||||||| |||||||||||||||| |||||| |||||    
T  15143274 tatatttttagcaacaatattctccatccatcaaattttgagtcatactataacaa 15143219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 32520316 - 32520241
Alignment:
Q  175 aaaatatatttgcatcaaatcgttcttcatacggtacaaaaatata--tttattgtccataaatatattttcagca 248  Q
    ||||||| ||||||||||||  |||||| |||||||||||||||||  |||| | | |||||||||||||||||||    
T  32520316 aaaatatgtttgcatcaaatttttcttcgtacggtacaaaaatatatttttactctacataaatatattttcagca 32520241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17072896 - 17072859
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  17072896 ctaaacccttgtttcagccccctctatctcaaggttta 17072859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21288777 - 21288710
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatattt 65  Q
    |||||||||| ||||| ||||||| ||||||||||||| |   |||||||||||||||||||| ||||    
T  21288777 ctaaacccttatttcaaccccctctatctcaaggtttactctaattcaaggtctatatttataaattt 21288710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25904116 - 25904079
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  25904116 ctaaacccttgtttcagccccctctatctcaaggttta 25904079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 40221535 - 40221498
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  40221535 ctaaacccttgtttcagccccctctatctcaaggttta 40221498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 41586025 - 41586062
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaac 96  Q
    |||||||||||||||||||||||||||| |||||||||    
T  41586025 tatatttatagtaaaagtataactcatagatttggaac 41586062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2818602 - 2818664
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  2818602 ctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 2818664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 282
Target Start/End: Original strand, 2532750 - 2532785
Alignment:
Q  247 cacaaaatatatttgaaacaaatcttttatattttc 282  Q
    ||||| ||||||||||||||||||||||||||||||    
T  2532750 cacaagatatatttgaaacaaatcttttatattttc 2532785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 6661594 - 6661648
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaa 216  Q
    |||||||||||||||||||||||| | ||||||| | |||||| | |||||||||    
T  6661594 aatattccctttcaaaatatatttacttcaaatcttccttcattcagtacaaaaa 6661648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34530932 - 34530992
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatattta 58  Q
    |||||| ||||||||||||||||| ||||||||||||| |   |||||| |||||||||||    
T  34530932 ctaaacacttgtttcagccccctctatctcaaggtttactctgattcaaagtctatattta 34530992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20507728 - 20507765
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  20507728 ctaaacccttgtttcagccccctctatctcaaagttta 20507765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31472879 - 31472916
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  31472879 ctaaacccttgttttagccccctctatctcaaggttta 31472916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36208594 - 36208531
Alignment:
Q  1 ctaaacccttgttt-cagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||| |||||||||| ||||||||||||| |   || |||||||||||||||||    
T  36208594 ctaaacccttgttttcagccccctctatctcaaggtttactctgatacaaggtctatatttata 36208531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36402594 - 36402631
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  36402594 ctaaacccttgtttcagccccctctatctcaacgttta 36402631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41585972 - 41586009
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||  |||||||||||||    
T  41585972 ctaaacccttgtttcagccccctttatctcaaggttta 41586009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6661448 - 6661510
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   || |||||||||||||||||    
T  6661448 ctaaacccttgtttcaaccctctctatctcaaggtttactctgatacaaggtctatatttata 6661510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12556189 - 12556251
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||| ||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  12556189 ctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 12556251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 20043063 - 20043027
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  20043063 ctaaacacttgtttcagccccctctatctcaaggttt 20043027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 20045023 - 20044987
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    ||||||||||||||||||||||||  |||||||||||    
T  20045023 ctaaacccttgtttcagccccctctgtctcaaggttt 20044987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25921739 - 25921775
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  25921739 ctaaacccttgtttcagccccctctatctcaaagttt 25921775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 31542748 - 31542712
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  31542748 ctaaacccttgtttcagccccctctatctcaaagttt 31542712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 22132718 - 22132987
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  22132718 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 22132816  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22132817 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 22132916  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||    
T  22132917 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgaatcatactacaaca 22132987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 22134949 - 22135219
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||           ||||||||||||||||||||||| ||||||    
T  22134949 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgaatcaaa 22135047  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22135048 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 22135147  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  22135148 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 22135219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 5101011 - 5100743
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaa 158  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| | | || |||||         ||||||||||||||||||||||||||||||||    
T  5101011 tatatttatagtaaaagtataactcataaatttggaacgaataccagattgaa-gatacgttttttttctccttcagtgaaagaatatttgcatcaaaaa 5100913  T
Q  159 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5100912 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttgttgtccataaatatattttcagcacaaaatatat 5100813  T
Q  259 ttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    || |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  5100812 ttaaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 5100743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 59 - 329
Target Start/End: Original strand, 17662557 - 17662827
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  17662557 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacttttttttttctccttcagtgaaagaatatttgcatcaaaa 17662655  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17662656 atataatattccctttcaaaatatatttgcatcaaatcgttcttcgtacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 17662755  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    ||| |||||||||||||||||||| ||||||||||||||||| |||||||||||  ||| ||||||||||||    
T  17662756 tttaaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttgtagtcatactacaacaa 17662827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 14787752 - 14788021
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  14787752 tatatttatagtaaaagtataactcataaatttggaacgaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 14787850  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14787851 atataatattccctttcaaaatatatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatata 14787950  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| |||||||||||    
T  14787951 tttgaaacaaatcttttatatttttagcaacattattctccatccatcaaattttgagtcatactacaaca 14788021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 59 - 330
Target Start/End: Complemental strand, 56030458 - 56030187
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    |||||||||||||||| ||||||||||||||||||||   |||||||||  || |||||          ||||||||||||||||||||||||| |||||    
T  56030458 tatatttatagtaaaaatataactcataaatttggaaagaataccacaccgaa-gatacttttttttttctccttcagtgaaagaatatttgcaccaaaa 56030360  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56030359 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 56030260  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaat 330  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  56030259 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacaat 56030187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 59 - 329
Target Start/End: Complemental strand, 24348228 - 24347958
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| | || |||||           ||||||||||||||||||||||||||||||    
T  24348228 tatatttatagtaaaagtataactcataaatttggaacaaataccacattgaa-gatactttttttttttctccttcagtgaaagaatatttgcatcaaa 24348130  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||    
T  24348129 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttc-gcacaaaatat 24348031  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  24348030 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacaa 24347958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 59 - 330
Target Start/End: Original strand, 44600157 - 44600430
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaa 155  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| || ||| |            |||||||||||||||||||||||||||||    
T  44600157 tatatttatagtaaaagtataactcataaatttgaaacaaataccacactgaa-gattcgttttttttttcctccttcagtgaaagaatatttgcatcaa 44600255  T
Q  156 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaata 255  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  44600256 aaatataatattcccttttaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatata 44600355  T
Q  256 tatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaat 330  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||||||||    
T  44600356 tatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaacaat 44600430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 127 - 312
Target Start/End: Complemental strand, 30136516 - 30136331
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    |||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30136516 ctccttcaatgaaagaatatttgaatcaaaaatataatattctcttttaaaatatatttgcatcaaatcgttcttcatacagtacaaaaatatatttatt 30136417  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatttt 312  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  30136416 gtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccattcatcaaatttt 30136331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 328 - 473
Target Start/End: Complemental strand, 44692763 - 44692618
Alignment:
Q  328 aattccaaaataaattttgcaacaaaattagacataggatcagatgcttaataacaagagcttgtatattacaagcatccctacatagtttttcgataca 427  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44692763 aattccaaaataaattttgcaacaaaattagacttaggatcagatgcttaataacaagagcttgtatattacaagcatccctacatagtttttcgataca 44692664  T
Q  428 tgtaagacgtgccgtaaggaaaaaggtaggctttcttaaacactta 473  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  44692663 tgtaagacgtaccgtaaggaaaaaggtaggctttcttaaacactta 44692618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 178 - 330
Target Start/End: Original strand, 47211158 - 47211310
Alignment:
Q  178 atatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 277  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47211158 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttgagcacaaaatatatttgaaacaaatcttttata 47211257  T
Q  278 ttttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaat 330  Q
    |||| ||||||||||||||||| |||||||||||| ||| |||||||||||||    
T  47211258 tttttagcaacaatattctccatccatcaaattttaagtcatactacaacaat 47211310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 128 - 329
Target Start/End: Complemental strand, 9022252 - 9022059
Alignment:
Q  128 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattg 227  Q
    ||||| |||||||||||||||||||||||       |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  9022252 tcctttagtgaaagaatatttgcatcaaa-------tattcccttttaaaatatatttgcatcaaatctttcttcatacggtagaaaaatatatttattg 9022160  T
Q  228 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaac 327  Q
    || |||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||   || |||| ||||||||| | ||||||||||    
T  9022159 tc-ataaatatattttcagcaaaaaatatatttgaaacaaatcatttatattttcaacaacaatatttctcatccataaaattttgaatcatactacaac 9022061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 127 - 329
Target Start/End: Original strand, 38890517 - 38890702
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatatt-ccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttat 225  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||    
T  38890517 ctcctttagtgaaagaatatttgcatcaaaaatataatatttccctttcaaaatatatttgcatcaaatcgtccttcatacaatacaaaaatatatttat 38890616  T
Q  226 tgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactaca 325  Q
    ||||||||                  |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| || |||||    
T  38890617 tgtccata------------------aatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatgctaca 38890698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 127 - 328
Target Start/End: Complemental strand, 10112815 - 10112626
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    |||||| ||||||| |||||||||||||||       ||||| |||||||| ||||||| ||||||||| | ||||||||| ||||||||||||||||||    
T  10112815 ctcctttagtgaaataatatttgcatcaaa-------tattctctttcaaa-tatatttacatcaaatcttccttcatacgatacaaaaatatatttatt 10112724  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 326  Q
    ||||||||||||| |||||||||||||||||||||||||    |||||||||||| |||||||||||||| ||  || |||||||| ||| |||||||||    
T  10112723 gtccataaatatagtttcagcacaaaatatatttgaaac----cttttatatttttagcaacaatattcttcattcaacaaattttaagtcatactacaa 10112628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 19322641 - 19322547
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatat 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  19322641 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcctttatacagtacaaaaatatat 19322547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 174 - 328
Target Start/End: Complemental strand, 9863650 - 9863499
Alignment:
Q  174 caaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttt 273  Q
    |||||||||||||||||||||| | |||||| |   ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||    
T  9863650 caaaatatatttgcatcaaatcttccttcatgc---acaaaaatatatttattgttcataaatatatttttagcacaaaatatgtttgaaacaaatcatt 9863554  T
Q  274 tatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||| || ||||||||  | || ||| |||||||||||| ||| |||||||    
T  9863553 tatatttttagtaacaatatatttcatccaacaaattttgagtcatattacaaca 9863499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 53405141 - 53404998
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaa 155  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||            |||||| ||||||||||||||||||||||    
T  53405141 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaaa-atacgtttttttttttctcctttagtgaaagaatatttgcatcaa 53405043  T
Q  156 aaatataatattccctttcaaaatatatttgcatcaaatcgttct 200  Q
    ||||||||| || ||||||||||||||||||||||||||||||||    
T  53405042 aaatataatttttcctttcaaaatatatttgcatcaaatcgttct 53404998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 227 - 326
Target Start/End: Complemental strand, 19322510 - 19322410
Alignment:
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagc-aacaatattctccaaccatcaaattttgagtgatactaca 325  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||||||||||| ||| || ||||||||||| |||||||||||||||| ||||||||    
T  19322510 gtccataaatatattttcagtataaaatatatttaaaacaaatcttttatatttttagcaaaaaatattctccatccatcaaattttgagtcatactaca 19322411  T
Q  326 a 326  Q
    |    
T  19322410 a 19322410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 54929094 - 54929180
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    ||||||||  || ||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54929094 aatattcctattaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatattttttgtccataaatatattttcagca 54929180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 316
Target Start/End: Original strand, 38209098 - 38209257
Alignment:
Q  162 aatattccctttcaaa-atatatttgcatcaaatcgttcttcatacggtacaaaaatatatttat--tgtccataaatatattttc--agcacaaaatat 256  Q
    |||||||| ||||||| |||||||||||||||||| | |||||||| ||||||||||||||||||  | || | ||  || || |   ||||||||||||    
T  38209098 aatattccttttcaaatatatatttgcatcaaatcttccttcatacagtacaaaaatatatttatattttcaacaacaatcttcttgaagcacaaaatat 38209197  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 316  Q
    |||| |||||||||||||||||||| | |||||||||| | || ||||||||||||||||    
T  38209198 atttaaaacaaatcttttatatttttaacaacaatatttttcatccatcaaattttgagt 38209257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 10979755 - 10979676
Alignment:
Q  169 cctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    ||||| ||||||||||||||||||||| | |||||||| | |||||||||||||| ||||||||||||||||||||||||    
T  10979755 cctttaaaaatatatttgcatcaaatcttccttcatacagcacaaaaatatatttgttgtccataaatatattttcagca 10979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 14789500 - 14789571
Alignment:
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||| |||||||||||    
T  14789500 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaaca 14789571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 18709490 - 18709539
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacact 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18709490 tatatttatagtaaaagtataactcataaatttggaacaaataccacact 18709539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 47211065 - 47211114
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacact 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  47211065 tatatttatagtaaaagtataactcataaatttggaacaaataccacact 47211114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 312
Target Start/End: Original strand, 5516771 - 5516833
Alignment:
Q  250 aaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatttt 312  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||||  |||||||||||    
T  5516771 aaaatatatttgaaacaattcatttatatttttagcaacaatattctccattcatcaaatttt 5516833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 419
Target Start/End: Original strand, 44636412 - 44636496
Alignment:
Q  335 aaataaattttgcaacaaaattagacataggatcagatgcttaataacaagagcttgtatattacaagcatccctacatagtttt 419  Q
    |||||| ||||||||||||||||||  |||||||| || ||||||||  ||| ||||||||||||||| |||||  |||||||||    
T  44636412 aaataatttttgcaacaaaattagatttaggatcaaatacttaataattagaacttgtatattacaagtatccccgcatagtttt 44636496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 29609838 - 29609897
Alignment:
Q  186 gcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca 245  Q
    |||||||||| | |||||||||||||||||||||||||| | | ||||||||||||||||    
T  29609838 gcatcaaatcttccttcatacggtacaaaaatatatttactcttcataaatatattttca 29609897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47274794 - 47274732
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  47274794 ctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 47274732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 14647172 - 14647214
Alignment:
Q  206 cggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  14647172 cggtacaaaaatatatttgttgtccatgaatatattttcagca 14647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 472
Target Start/End: Complemental strand, 44654217 - 44654120
Alignment:
Q  374 cttaataacaagagcttgtatattacaagcatccctacatagtttttcgatacatgtaagacgtgccgtaaggaaaaaggtaggctttcttaaacactt 472  Q
    |||||||| |||||||||||||||| ||||||||   ||||| ||||| ||||||| | ||||  |||| ||||||| ||||||| |||| ||||||||    
T  44654217 cttaataataagagcttgtatattaaaagcatcctctcatag-ttttcaatacatgcatgacgaaccgtgaggaaaagggtaggcattctcaaacactt 44654120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19095949 - 19095912
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  19095949 ctaaacccttgtttcagccccctctatctcaaggttta 19095912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24446845 - 24446882
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  24446845 ctaaacccttgtttcagccccctctatctcaaggttta 24446882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 29609914 - 29609983
Alignment:
Q  245 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttga 314  Q
    |||||||||||||||||||| |||||    ||| ||| |||||||||||||| || ||||||||||||||    
T  29609914 agcacaaaatatatttgaaaaaaatcaagaatacttttagcaacaatattcttcatccatcaaattttga 29609983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 33415753 - 33415790
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  33415753 ctaaacccttgtttcagccccctctatctcaaggttta 33415790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37313332 - 37313369
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  37313332 ctaaacccttgtttcagccccctctatctcaaggttta 37313369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22801128 - 22801190
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  22801128 ctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 22801190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22803000 - 22803062
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  22803000 ctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 22803062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40091681 - 40091743
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  40091681 ctaaacccttgtttcagccccctctatctcaaagtttactttgatacaaggtctatatttata 40091743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 48486386 - 48486324
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  48486386 ctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 48486324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 619714 - 619775
Alignment:
Q  2 taaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    ||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  619714 taaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 619775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 54929198 - 54929245
Alignment:
Q  247 cacaaaatatatttgaaacaaatcttttatattttcagcaacaatatt 294  Q
    ||||||||| |||| || ||||||||||||||||| ||||||||||||    
T  54929198 cacaaaatacatttaaatcaaatcttttatatttttagcaacaatatt 54929245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 2891384 - 2891347
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  2891384 ctaaacccttgtttcagccccctctatcttaaggttta 2891347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3937475 - 3937512
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  3937475 ctaaacccttgtttcagctccctctatctcaaggttta 3937512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 15032802 - 15032839
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||  |||||||||||||    
T  15032802 ctaaacccttgtttcagccccctttatctcaaggttta 15032839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19322764 - 19322727
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  19322764 ctaaacccttgtttcatccccctctatctcaaggttta 19322727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36378359 - 36378322
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    ||||||||||||||||||||| || |||||||||||||    
T  36378359 ctaaacccttgtttcagccccgtctatctcaaggttta 36378322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38928444 - 38928481
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  38928444 ctaaactcttgtttcagccccctctatctcaaggttta 38928481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 56030511 - 56030474
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    ||||||||||||||||||||| || |||||||||||||    
T  56030511 ctaaacccttgtttcagccccttctatctcaaggttta 56030474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5198487 - 5198451
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  5198487 ctaaacccttgtttcagccccctctatctcaaagttt 5198451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 5516703 - 5516747
Alignment:
Q  199 cttcatacggtacaaaaatatatttattgtccataaatatatttt 243  Q
    ||||||||| || ||||||||||||||| || |||||||||||||    
T  5516703 cttcatacgataaaaaaatatatttattatctataaatatatttt 5516747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44600104 - 44600140
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  44600104 ctaaacccttgtttcagccccctctatctcaaagttt 44600140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 59 - 331
Target Start/End: Complemental strand, 15809231 - 15808959
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  15809231 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 15809133  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15809132 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcaacacaaaatata 15809033  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaatt 331  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||| |||||||    
T  15809032 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactaaaacaatt 15808959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 28283544 - 28283813
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||  ||||| || |||||          |||||||||||||||||||||||||||||||    
T  28283544 tatatttatagtaaaagtataactcataaatttggaacaaatattacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 28283642  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28283643 atataatattcactttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 28283742  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||||||||    
T  28283743 tttgaaacaaatcttttatatttttagcaaaaatattctccatccatcaaattttgagtcatactacaaca 28283813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 43530140 - 43529871
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| || |||||          ||||||||||||||||||||| |||| ||||    
T  43530140 tatatttatagtaaaagtataactcataaatttggaataaataccacactgaa-gatacttttttttttctccttcagtgaaagaatattagcataaaaa 43530042  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43530041 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 43529942  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  43529941 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 43529871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 59 - 329
Target Start/End: Complemental strand, 3874022 - 3873749
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaa 155  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  || ||||             |||||||||||||||||||||||||||||    
T  3874022 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaa-gatatgtttttttttttctccttcagtgaaagaatatttgcatcaa 3873924  T
Q  156 aaatataatattccctttcaaaatatatttgcatcaaatcgtt-cttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaat 254  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3873923 aaatataatattctctttcaaaatatatttgcatcaaatcgtttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaat 3873824  T
Q  255 atatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  3873823 atatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacaa 3873749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 41384761 - 41384493
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnct-ccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| || |||||          | |||||| ||||||||||||||||| ||||    
T  41384761 tatatttatagtaaaagtataactcataaatttggaacgaataccacactgaa-gatacgtttttttttttccttcaatgaaagaatatttgcat-aaaa 41384664  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  41384663 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatata 41384564  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    || ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  41384563 ttcgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 41384493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 41382742 - 41382420
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaaca 97  Q
    |||||||||||||| |||||| || ||||||||||||| |   ||||||||||||||||||||        ||||||||||||||||||||||||||||     
T  41382742 ctaaacccttgttttagccccatctatctcaaggtttactctgattcaaggtctatatttata--------gtaaaagtataactcataaatttggaacg 41382651  T
Q  98 gataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatc 195  Q
     |||||||||| || |||||           ||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  41382650 aataccacactgaa-gatacgttttttttttctcattcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaatatatttgcatcaaatc 41382552  T
Q  196 gttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattc 295  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||| | |||||||||||    
T  41382551 gttgttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatatttttaacaacaatattc 41382452  T
Q  296 tccaaccatcaaattttgagtgatactacaac 327  Q
    |||| |||||||||||||||| ||||||||||    
T  41382451 tccatccatcaaattttgagtcatactacaac 41382420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 127 - 328
Target Start/End: Complemental strand, 608671 - 608470
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  608671 ctccttcagtgaaagaatatttgcataaaatatataatattctctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 608572  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  ||||||||||||||||||||||||||    
T  608571 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtgatactacaa 608472  T
Q  327 ca 328  Q
    ||    
T  608471 ca 608470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 170 - 328
Target Start/End: Complemental strand, 32339252 - 32339094
Alignment:
Q  170 ctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaat 269  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32339252 ctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaat 32339153  T
Q  270 cttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  32339152 cttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 32339094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 211 - 328
Target Start/End: Original strand, 3265635 - 3265752
Alignment:
Q  211 caaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatt 310  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  3265635 caaacatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatt 3265734  T
Q  311 ttgagtgatactacaaca 328  Q
    |||||| |||||||||||    
T  3265735 ttgagtcatactacaaca 3265752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 181553 - 181434
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| || |||||           |||||| |||||||||||||||||||||||    
T  181553 tatatttatagtaaaagtataactcataaatttggaacgaataccacactgaa-gatacgtttttttcttctcctttagtgaaagaatatttgcatcaaa 181455  T
Q  157 aatataatattccctttcaaa 177  Q
    |||||||||||||||||||||    
T  181454 aatataatattccctttcaaa 181434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 11701364 - 11701447
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||||||||||||||||||| || ||||||||||||||||||||    
T  11701364 aatattccctttaaaaatatatttacatcaattc-ttc--catacggtacaaaaatatatttactgaccataaatatattttcagca 11701447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 32339321 - 32339272
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacact 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32339321 tatatttatagtaaaagtataactcataaatttggaacaaataccacact 32339272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 24873506 - 24873555
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacact 108  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  24873506 tatatttatagtaaaagtataactcataaatttggaacaaatacaacact 24873555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 13986214 - 13986285
Alignment:
Q  174 caaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca 245  Q
    |||||||||||||||||||||| |  ||||| |||||||||||| |||| | | ||||||||||||||||||    
T  13986214 caaaatatatttgcatcaaatcttctttcatgcggtacaaaaatttattaactatccataaatatattttca 13986285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 13986304 - 13986372
Alignment:
Q  247 cacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 316  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||| |||| || |||| |||||||||||    
T  13986304 cacaaaatatatttaaaacaaatcttt-atatttttagcaacaatcttcttcatccataaaattttgagt 13986372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15072779 - 15072717
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  15072779 ctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 15072717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 1225235 - 1225198
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  1225235 ctaaacccttgtttcagccccctctatctcaaggttta 1225198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5623004 - 5623041
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  5623004 ctaaacccttgtttcagccccctctatctcaaggttta 5623041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14419457 - 14419494
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  14419457 ctaaacccttgtttcagccccctctatctcaaggttta 14419494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27107163 - 27107200
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  27107163 ctaaacccttgtttcagccccctctatctcaaggttta 27107200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27911084 - 27911047
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  27911084 ctaaacccttgtttcagccccctctatctcaaggttta 27911047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27957503 - 27957466
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  27957503 ctaaacccttgtttcagccccctctatctcaaggttta 27957466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 30679186 - 30679254
Alignment:
Q  247 cacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 316  Q
    |||||||||||| | ||||||||||||| |||||| | |||| ||||||| || ||||||||||||||||    
T  30679186 cacaaaatatatctaaaacaaatcttttttatttttaccaac-atattcttcatccatcaaattttgagt 30679254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35872644 - 35872681
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  35872644 ctaaacccttgtttcagccccctctatctcaaggttta 35872681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37214476 - 37214513
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  37214476 ctaaacccttgtttcagccccctctatctcaaggttta 37214513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25952590 - 25952554
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  25952590 ctaaacccttgtttcagccccctctatctcaaggttt 25952554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26775270 - 26775234
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  26775270 ctaaacccttgtttcagccccctctatctcaaggttt 26775234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 13858750 - 13858787
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  13858750 ctaaacccttgtttcatccccctctatctcaaggttta 13858787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21480583 - 21480546
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    ||||||||||||||||||||| || |||||||||||||    
T  21480583 ctaaacccttgtttcagccccatctatctcaaggttta 21480546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 276
Target Start/End: Original strand, 27820149 - 27820178
Alignment:
Q  247 cacaaaatatatttgaaacaaatcttttat 276  Q
    ||||||||||||||||||||||||||||||    
T  27820149 cacaaaatatatttgaaacaaatcttttat 27820178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 33541654 - 33541691
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  33541654 ctaaacccttgtttcagccccctctatctcaatgttta 33541691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36865607 - 36865570
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  36865607 ctaaacccttgtttcagccccctctatcttaaggttta 36865570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 3886184 - 3886220
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  3886184 ctaaacccttgtttcagccccctctatctcaaagttt 3886220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14477345 - 14477309
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  14477345 ctaaacccttgtttcaaccccctctatctcaaggttt 14477309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14807820 - 14807784
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  14807820 ctaaacccttgtttcagccccctctatctcaaagttt 14807784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44720912 - 44720876
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  44720912 ctaaacccttgtttcagccccctctatctcaaagttt 44720876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 59 - 329
Target Start/End: Original strand, 11792 - 12062
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  11792 tatatttatagtaaaagtataactcataaatttggaacgaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 11890  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11891 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 11990  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||    
T  11991 tttgaaacaaattttttatatttttagcaacaatattctccatccatcaaattttgaatcatactacaacaa 12062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 192; Significance: 1e-104; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 51978 - 51709
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| || |||||          |||||||||||||||||||||||||||||||    
T  51978 tatatttatagtaaaagtataactcataaatttggaacgaataccacactgaa-gatacgtttttttttctccttcagtgaaagaatatttgcatcaaaa 51880  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  51879 atataatattccctttcaaaatatatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatata 51780  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| |||||||||||    
T  51779 tttgaaacaaatcttttatatttttagcaacattattctccatccatcaaattttgagtcatactacaaca 51709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 50230 - 50159
Alignment:
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||| |||||||||||    
T  50230 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaaca 50159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 170118 - 170076
Alignment:
Q  206 cggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  170118 cggtacaaaaatatatttgttgtccatgaatatattttcagca 170076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 12195834 - 12196104
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||| |           ||||||||||||||||||||||||||||||    
T  12195834 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gattcgttttttttttctccttcagtgaaagaatatttgcatcaaa 12195932  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12195933 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatat 12196032  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||||||    
T  12196033 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaaca 12196104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 2629209 - 2629479
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||| || |||||           ||||||||||||||||||||||||||||||    
T  2629209 tatatttatagtaaaagtataactaataaatttggaacaaatactacactgaa-gatacgtttttttttcctccttcagtgaaagaatatttgcatcaaa 2629307  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2629308 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 2629407  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||| |||||||||||    
T  2629408 atttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaca 2629479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 127 - 328
Target Start/End: Original strand, 5275727 - 5275928
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5275727 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 5275826  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 326  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||    
T  5275827 gtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 5275926  T
Q  327 ca 328  Q
    ||    
T  5275927 ca 5275928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 59 - 331
Target Start/End: Original strand, 30034926 - 30035199
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||| | || |||||           |||||||||||||||||||| |||||||||    
T  30034926 tatatttatagtaaaagtataactcataaatttggaacaaatatcacattgaa-gatacgtttttattttctccttcagtgaaagaatatctgcatcaaa 30035024  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  30035025 aatataatattccctttcaaaatatatttgcattaaatcgttcttcatacgatacaaaaatatatttattgtctataaatatatttttagcacaaaatat 30035124  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaatt 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  30035125 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacaatt 30035199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 30967193 - 30966923
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||| |           ||||||||||||||||||||||||||||||    
T  30967193 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaa-gattcgttttttttttctccttcagtgaaagaatatttgcatcaaa 30967095  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30967094 aatataatattcgctttcaaaatatatttgcattaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 30966995  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||| |||| |||||||||||    
T  30966994 atttgaaataaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatactacaaca 30966923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 59 - 329
Target Start/End: Original strand, 26932889 - 26933159
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||||||| || ||| |          |||||||||||||||||||||||||||||||    
T  26932889 tatatttatagtgaaagtataacccataaatttggaacaaataccacactgaa-gattcgtttttttttctccttcagtgaaagaatatttgcatcaaaa 26932987  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  26932988 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataataatattttcagcacaatatata 26933087  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  26933088 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaacaa 26933159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 59 - 329
Target Start/End: Complemental strand, 18318021 - 18317750
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||| || |||||           |||||||||||||||||||||||||| |||    
T  18318021 tatatttatagtgaaagtataactcataaatttggaacgaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcataaaa 18317923  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18317922 aatataatattccctttcaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 18317823  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    ||||||||||||||||||||||||| |||||||||||||| |  || ||||||||||||| ||||||||||||    
T  18317822 atttgaaacaaatcttttatatttttagcaacaatattcttcttccttcaaattttgagtcatactacaacaa 18317750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 127 - 329
Target Start/End: Original strand, 19704964 - 19705166
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  19704964 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 19705063  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 326  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||| |||||||||    
T  19705064 gtccataaatatattttcagcacaaaatatctttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 19705163  T
Q  327 caa 329  Q
    |||    
T  19705164 caa 19705166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 330
Target Start/End: Complemental strand, 17852590 - 17852265
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaaca 97  Q
    |||||||||||||||||||||||| ||||||||||||| |   |||||| |||||||||||||        ||||||||||||||||||||||||||||     
T  17852590 ctaaacccttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttata--------gtaaaagtataactcataaatttggaacg 17852499  T
Q  98 gataccacactaaaagatacnnnnnnnnn----ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaa 193  Q
     ||||||||| ||  |||||             ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17852498 aataccacacgaa--gatacttttttttttcttctctttcagtgaaataatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaa 17852401  T
Q  194 tcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagca--acaat 291  Q
    | |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||  |||||    
T  17852400 tagttcttcataaggtacaaaaatatatttattgtccataaatatattttcagcataaa--atatttgaaacaaatcttttatatttttagcaacacaat 17852303  T
Q  292 attctccaaccatcaaattttgagtgatactacaacaat 330  Q
    ||||||| | ||||||||||||||| ||| | |||||||    
T  17852302 attctcc-atcatcaaattttgagtcatatttcaacaat 17852265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 131 - 326
Target Start/End: Complemental strand, 17011973 - 17011781
Alignment:
Q  131 ttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtcc 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  17011973 ttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccatcatacggtacaaaaatatatttattgtcc 17011874  T
Q  231 ataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 326  Q
    ||||||||||||||  ||||||  |||||| ||||||| |||||||||||| ||||| |||||||| || |||||||||||| ||| |||||||||    
T  17011873 ataaatatattttctacacaaa--atatttaaaacaaa-cttttatatttttagcaataatattcttcatccatcaaattttaagtcatactacaa 17011781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 127 - 328
Target Start/End: Original strand, 22858343 - 22858536
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    |||||||| ||||||||||||||||||||||        ||||||||||||||||||||||||| |||| |  |||||||||||||||||||||||||||    
T  22858343 ctccttcaatgaaagaatatttgcatcaaaa--------ttccctttcaaaatatatttgcatctaatcttctttcatacggtacaaaaatatatttatt 22858434  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 326  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |  ||||||||||| || |||||||||||||||| |||||||||    
T  22858435 gtccataaatatattttcagcacaaagtatatttaaaacaaatcttttatatttttattaacaatattcttcatccatcaaattttgagtcatactacaa 22858534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 162 - 326
Target Start/End: Complemental strand, 20526708 - 20526548
Alignment:
Q  162 aatattccctttcaaaa-tatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattt 260  Q
    ||||||| ||||||||| ||||||||||||||||| | ||||||||||||||||||||||| ||     ||||||||||||||||||| |||||||||||    
T  20526708 aatattctctttcaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatgta-----cataaatatattttcagcataaaatatattt 20526614  T
Q  261 gaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 326  Q
    ||||||||||||||||||||| |||||||||||||| || |||||||||||||||| |||||||||    
T  20526613 gaaacaaatcttttatatttttagcaacaatattcttcacccatcaaattttgagtcatactacaa 20526548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 30445404 - 30445318
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    |||||||| ||| ||||||||||||||||||||| | ||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  30445404 aatattcctttttaaaatatatttgcatcaaatcttccttcatatggtacaaaaatatatttattgttcataaatatattttcagca 30445318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 30443195 - 30443111
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    |||||| | ||| |||||| |||||||||||||| | ||| |||||||||||| |||||||  ||||||||||||||||||||||||    
T  30443195 aatatttcttttaaaaatacatttgcatcaaatcttcctttatacggtacaaacatatatt--ttgtccataaatatattttcagca 30443111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 30445304 - 30445243
Alignment:
Q  245 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatca 306  Q
    ||||||||||||||||||||||||| ||||||||||  |||||||||||||| || ||||||    
T  30445304 agcacaaaatatatttgaaacaaatattttatatttctagcaacaatattcttcatccatca 30445243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 316
Target Start/End: Complemental strand, 30443092 - 30443024
Alignment:
Q  250 aaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc--aaattttgagt 316  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||| || |||||  |||||||||||    
T  30443092 aaaatatatttgaaacaaatctcttatatttttaacaacaatattcttcatccatcataaattttgagt 30443024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15532947 - 15533009
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  15532947 ctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 15533009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15541406 - 15541468
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  15541406 ctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 15541468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13057242 - 13057205
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  13057242 ctaaacccttgtttcagccccctctatctcaaggttta 13057205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15719702 - 15719665
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  15719702 ctaaacccttgtttcagccccctctatctcaaggttta 15719665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24338714 - 24338751
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  24338714 ctaaacccttgtttcagccccctctatctcaaggttta 24338751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25477322 - 25477285
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  25477322 ctaaacccttgtttcagccccctctatctcaaggttta 25477285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32447582 - 32447619
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  32447582 ctaaacccttgtttcagccccctctatctcaaggttta 32447619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 22490685 - 22490650
Alignment:
Q  3 aaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  22490685 aaacccttgtttcagccccctctatctcaaggttta 22490650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3390427 - 3390390
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    ||||||||||||||||||||| || |||||||||||||    
T  3390427 ctaaacccttgtttcagccccgtctatctcaaggttta 3390390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15346439 - 15346402
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  15346439 ctaaacccttggttcagccccctctatctcaaggttta 15346402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 19704835 - 19704864
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctc 30  Q
    ||||||||||||||||||||||||||||||    
T  19704835 ctaaacccttgtttcagccccctccatctc 19704864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 30729098 - 30729131
Alignment:
Q  5 acccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||| |||||||||||||    
T  30729098 acccttgtttcagccccctctatctcaaggttta 30729131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 12195781 - 12195817
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  12195781 ctaaacccttgtttcagccccctctatctcaaagttt 12195817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 23452560 - 23452829
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || | |||          |||||||||||||||||||||||||||||||    
T  23452560 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagg-tacttttttttttctccttcagtgaaagaatatttgcatcaaaa 23452658  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  23452659 atataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatttattttcagcataaaatata 23452758  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  23452759 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 23452829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 59 - 330
Target Start/End: Complemental strand, 42452719 - 42452447
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||  || |||||           ||||||||||||||||||||||||||||||    
T  42452719 tatatttataataaaagtataactcataaatttggaacaaataccacaccgaa-gatacattttttttttctccttcagtgaaagaatatttgcatcaaa 42452621  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42452620 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 42452521  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaat 330  Q
    ||||||||||||||||||||||||| |||||||||||||| || |||||||||||| ||| |||||||||||||    
T  42452520 atttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttaagtcatactacaacaat 42452447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 42923830 - 42924094
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaa 158  Q
    |||||||||||||||||||||||||||||||||||||| ||    ||||   |||||||         ||||||||||||||||||||||||||||||||    
T  42923830 tatatttatagtaaaagtataactcataaatttggaac-ga----acacctgaagatacttatttgttctccttcagtgaaagaatatttgcatcaaaaa 42923924  T
Q  159 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatat 258  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42923925 tataatatttcttttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatat 42924024  T
Q  259 ttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  42924025 ttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 42924094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 59 - 329
Target Start/End: Original strand, 35218296 - 35218566
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||| || ||| |          |||||||||||||||||||||||||||||||    
T  35218296 tatatttatagtaaaagtataactcataaatttggagcaaataccacactgaa-gattcgtttttttttctccttcagtgaaagaatatttgcatcaaaa 35218394  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35218395 atataatattctctttcaaaatatatttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 35218494  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||||||||| ||||||||||||    
T  35218495 tttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatactacaacaa 35218566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 59 - 328
Target Start/End: Original strand, 35215915 - 35216184
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaa 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  || ||| |          |||||||||||||||||||| ||||||||||    
T  35215915 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaa-gattcatttttttttctccttcagtgaaagaatatctgcatcaaaa 35216013  T
Q  158 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatata 257  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35216014 atataatattccctttcaaaatatatttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 35216113  T
Q  258 tttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||||||||| |||||||||||    
T  35216114 tttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatactacaaca 35216184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 127 - 328
Target Start/End: Original strand, 27583713 - 27583907
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    ||||||||||||||||||||||||||||||       |||||| ||||||||||||||||||||||||  | ||||||| |||| |||||||||||||||    
T  27583713 ctccttcagtgaaagaatatttgcatcaaa-------tattccttttcaaaatatatttgcatcaaatattccttcatatggtataaaaatatatttatt 27583805  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 326  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| ||||||| |||||||||    
T  27583806 gttcataaatatatcttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaaatttgagtcatactacaa 27583905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 28568556 - 28568738
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 226  Q
    ||||||| |||||||||||| |||||||||       |||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||||||    
T  28568556 ctccttcggtgaaagaatatatgcatcaaa-------tattccctttcaaaatatatttgcatcaaatcttccttcacacgatacaaaaatatatttatt 28568648  T
Q  227 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 316  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||| |||||||||||||| || | ||||||||||||||    
T  28568649 gtccataaatatattttcaaaacaaaatatatttgaaacaaatcttttatagttttagcaacaatattcttcatctatcaaattttgagt 28568738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 199 - 330
Target Start/End: Original strand, 27136368 - 27136507
Alignment:
Q  199 cttcatacggtacaaaaatatatttattgtccataaatat--------attttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaa 290  Q
    |||||||||||||||||||||||||||| |||||||||||        ||||||| ||||||||||||||||||||||||||||||||||| |||| |||    
T  27136368 cttcatacggtacaaaaatatatttattttccataaatatatttatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaccaa 27136467  T
Q  291 tattctccaaccatcaaattttgagtgatactacaacaat 330  Q
    |||||| || |||||||||||||||| |||||||||||||    
T  27136468 tattcttcatccatcaaattttgagtcatactacaacaat 27136507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 162 - 312
Target Start/End: Complemental strand, 15693755 - 15693589
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttc----------------- 244  Q
    ||||| |||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||                     
T  15693755 aatatcccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgcccataaatatattttcagcaacaagtttttgga 15693656  T
Q  245 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatttt 312  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||| | || ||||||||||||    
T  15693655 agcacaaaatatatttgaaacaaatc-tttatatttttagcaacaatattattcatccatcaaatttt 15693589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 321
Target Start/End: Original strand, 34575608 - 34575696
Alignment:
Q  233 aaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatac 321  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||| || |||||||||||||||| ||||    
T  34575608 aaatatattttcagcacaaaatatatttagaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatac 34575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 39287042 - 39286971
Alignment:
Q  177 aatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    ||||||||||||||||||| |  |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  39287042 aatatatttgcatcaaatcttcattcatatggtacaaaaatatatttattgtccataaatatattttaagca 39286971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 34575528 - 34575617
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatattt 223  Q
    ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||  | ||| ||| |||||||||||||||||    
T  34575528 ctccttcagtgaaagaatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaattttcctttatatggtacaaaaatatattt 34575617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 316
Target Start/End: Original strand, 41303457 - 41303621
Alignment:
Q  170 ctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttc-----------------agcacaaa 252  Q
    |||| |||||||||||| ||||| || | ||||| ||||||||||| |||||||| |||||||||||||||||||                 ||||||||    
T  41303457 ctttaaaaatatatttgaatcaattcttccttcacacggtacaaaattatatttactgtccataaatatattttcagcaacaatcttatggaagcacaaa 41303556  T
Q  253 atatatttgaaacaaatcttttata-ttttcagcaacaatattctccaaccatcaaattttgagt 316  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||| || |||||||||| |||||    
T  41303557 atatatttgaaacaaatcttttatattttttagcaacaatcttcttcatccatcaaattctgagt 41303621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 28568411 - 28568348
Alignment:
Q  253 atatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 316  Q
    ||||||||||||||||||||||||||||| | |||||||||||| || ||||||||||||||||    
T  28568411 atatatttgaaacaaatcttttatatttttaacaacaatattcttcatccatcaaattttgagt 28568348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 7502723 - 7502638
Alignment:
Q  162 aatattccctttcaaaatatatttgcatcaaatcgttct-tcatacggtacaaaaatatatttattgtccataaatatattttcagc 247  Q
    |||||| ||||| ||||||||||||||||||||| |||| ||||||  ||||||||||| |||||||| ||||||||||||||||||    
T  7502723 aatatttcctttaaaaatatatttgcatcaaatc-ttctgtcatacaatacaaaaatatttttattgttcataaatatattttcagc 7502638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 41304806 - 41304884
Alignment:
Q  169 cctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagca 248  Q
    ||||| ||||||||||||||||||||| | ||||||| | |||||||||||||||| | |||||||||||||| ||||||    
T  41304806 cctttaaaaatatatttgcatcaaatcttccttcatatg-tacaaaaatatatttactatccataaatatattgtcagca 41304884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17849106 - 17849069
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  17849106 ctaaacccttgtttcagccccctctatctcaaggttta 17849069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19007629 - 19007592
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  19007629 ctaaacccttgtttcagccccctctatctcaaggttta 19007592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37963193 - 37963230
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  37963193 ctaaacccttgtttcagccccctctatctcaaggttta 37963230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 39286952 - 39286911
Alignment:
Q  250 aaaatatatttgaaacaaatcttttatattttcagcaacaat 291  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  39286952 aaaatatatttgaaacaaatcatttatatttttagcaacaat 39286911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6264411 - 6264473
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    ||||||| |||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  6264411 ctaaacctttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 6264473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40032324 - 40032386
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| ||||| |   || |||||||||||||||||    
T  40032324 ctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttata 40032386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 7502633 - 7502582
Alignment:
Q  264 acaaatcttttatattttcagcaacaatattctccaaccatcaaattttgag 315  Q
    |||||||||||||| ||| ||||||||| |||| || |||||||||||||||    
T  7502633 acaaatcttttatactttgagcaacaatcttcttcatccatcaaattttgag 7502582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 11739826 - 11739863
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  11739826 ctaaacccttgttccagccccctctatctcaaggttta 11739863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31733031 - 31733068
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  31733031 ctaaacccttgtttcagccccctctatctcaatgttta 31733068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34979845 - 34979882
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  34979845 ctaaacgcttgtttcagccccctctatctcaaggttta 34979882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22287602 - 22287664
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||  ||||||| ||||| |   || |||||||||||||||||    
T  22287602 ctaaacccttgtttcagccccctatatctcaaagtttactttaatacaaggtctatatttata 22287664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 22874131 - 22874095
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  22874131 ctaaacccttgtttcagccccctctatctccaggttt 22874095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 24162478 - 24162514
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  24162478 ctaaacccttgtttcagccccctctatctcaaagttt 24162514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 45280251 - 45280287
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  45280251 ctaaacccttgtttcagccccctctatctcaaagttt 45280287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 79207 - 78883
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttatatatttatagtaaaagtataactcataaatttggaaca 97  Q
    |||||||||||||| ||||||||| |||||||| |||| |   ||||||||||||||||||||        ||||| ||||||||||||||||||||||     
T  79207 ctaaacccttgttttagccccctctatctcaagttttactctgattcaaggtctatatttata--------gtaaaggtataactcataaatttggaacg 79116  T
Q  98 gataccacactaaaagatacnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 194  Q
     |||||||||| || |||||            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  79115 aataccacactgaa-gatacattttttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 79017  T
Q  195 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatatt 294  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||||||||    
T  79016 cgttcttcatacagtacaaaaatatatttattatccataaatatatttttagcagaaaatatatttgagacaaatcttttatatttttagcaacaatatt 78917  T
Q  295 ctccaaccatcaaattttgagtgatactacaaca 328  Q
    ||||| |||||||||||| ||| |||||||||||    
T  78916 ctccatccatcaaattttaagtcatactacaaca 78883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 167; Significance: 3e-89; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 59 - 329
Target Start/End: Complemental strand, 2005 - 1734
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaacagataccacactaaaagatacnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaa 156  Q
    |||||||||||| ||||||||||| |||||||||||||  |||||||||| || |||||           |||||||||||||||||||||||||| |||    
T  2005 tatatttatagtgaaagtataacttataaatttggaacgaataccacactgaa-gatacgttttttttttctccttcagtgaaagaatatttgcataaaa 1907  T
Q  157 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 256  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1906 aatataatattccctttcaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 1807  T
Q  257 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 329  Q
    ||||||||||||||||||||||||| |||||||||||||| |  || ||||||||||||| ||||||||||||    
T  1806 atttgaaacaaatcttttatatttttagcaacaatattcttcttccttcaaattttgagtcatactacaacaa 1734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 180 - 328
Target Start/End: Complemental strand, 4694 - 4546
Alignment:
Q  180 atatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 279  Q
    ||||||||||||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  4694 atatttgcatcaaattgtccttcatacagtacaaaaatatatatattgtccataaatatattttcagcacgaaatatattcgaaacaaatcttttatatt 4595  T
Q  280 ttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    || |||||||||||||| || |||||||||||||||| ||||| |||||    
T  4594 tttagcaacaatattcttcatccatcaaattttgagttatactgcaaca 4546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 103; Significance: 5e-51; HSPs: 2)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 213 - 327
Target Start/End: Original strand, 2070 - 2184
Alignment:
Q  213 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatttt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  2070 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 2169  T
Q  313 gagtgatactacaac 327  Q
    |||| ||||||||||    
T  2170 gagtcatactacaac 2184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 2022 - 2080
Alignment:
Q  127 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatattt 185  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2022 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 234 - 328
Target Start/End: Original strand, 1 - 95
Alignment:
Q  234 aatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  1 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 95  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 175 - 245
Target Start/End: Original strand, 57836 - 57905
Alignment:
Q  175 aaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca 245  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  57836 aaaatatatttgcatcaaatt-ttcttcatacggtacaaaaatatatttattgttcatacatatattttca 57905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 2232 - 2273
Alignment:
Q  250 aaaatatatttgaaacaaatcttttatattttcagcaacaat 291  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  2232 aaaatatatttgaaacaaatcttttatattttctgcaacaat 2273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4019 - 3957
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggtttagt---attcaaggtctatatttata 60  Q
    |||||||||||||||||||||||| ||||||| |||||||   || |||||||||||||||||    
T  4019 ctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttata 3957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 79881 - 79844
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttta 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  79881 ctaaacccttgtttcagccccctctatctcaaggttta 79844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 16137 - 16175
Alignment:
Q  59 tatatttatagtaaaagtataactcataaatttggaaca 97  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  16137 tatatttatagtaaaagtatccctcataaatttggaaca 16175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6221 - 6185
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  6221 ctaaacccttgtttcagccccctctatctcaaagttt 6185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2902 - 2866
Alignment:
Q  1 ctaaacccttgtttcagccccctccatctcaaggttt 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  2902 ctaaacccttgtttcagccccctctatctcaaagttt 2866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University