View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19943_high_7 (Length: 338)
Name: NF19943_high_7
Description: NF19943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19943_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 18 - 323
Target Start/End: Original strand, 4132627 - 4132932
Alignment:
| Q |
18 |
ataaaatacgcccacacactagaaatctgtagttatgcagagaaattgagcagagaaaacagaacgaactacaatcacaaaatgaaaagctagctacttc |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
4132627 |
ataaaatacgcccacacactagaaatctgtagttatgcagagaaattgagcagagaaaacagaacgaactacaatcgcaaaatgaaaagctagctacttc |
4132726 |
T |
|
| Q |
118 |
caattctcacgaatcacattcattgaagtttgagaactattggctcaaagtcacaccctccataaagagaaataatccaatagtcagagcacaaatattc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4132727 |
caattctcacgaatcacattcattgaagtttgagaactattggctcaaagtcacaccctccataaagagaaataatccaatagtcagagcacaaatattc |
4132826 |
T |
|
| Q |
218 |
ccaatcgtttctgcactctgctgagaaagacatcaacgtgctgcgccagaatacaagaccgcaaaatagcatagttatacacaccaaaactttatagcga |
317 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4132827 |
ccaatcgtttctgcactctgctgagaaagacatcaacatgctgcgccaaaatacaagaccgcaaaatagcatagttatacacaccaaaactttatagcga |
4132926 |
T |
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| Q |
318 |
cctttg |
323 |
Q |
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|||||| |
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| T |
4132927 |
cctttg |
4132932 |
T |
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