View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19947_high_15 (Length: 323)
Name: NF19947_high_15
Description: NF19947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19947_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 39 - 304
Target Start/End: Complemental strand, 38483246 - 38482981
Alignment:
| Q |
39 |
ctgctgaaaataaagtggataagttattaaagaagnnnnnnncaggaaccgtgagcaaccataatcagtacagtacttgtaattattccactcaattgca |
138 |
Q |
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| T |
38483246 |
ctgctgaaaataaagtggataagttattaaagaagaaaaaaacaggaaccgtgagcaaccataatcagtacagtacttgtaattattccactcaattgca |
38483147 |
T |
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| Q |
139 |
tggtacttatggccattgaatggtaaaggtaatgtcatcaagtggttttggaggggtatttccgtaaacacatacagaagaaaatagcttcggcttgtag |
238 |
Q |
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|| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38483146 |
tgatacttatgaccattgaatggtaaaggtaatgtcatcaagtggttttggaggggtatttccgtaaacacatacagaagaaaatagcttcggcttgtag |
38483047 |
T |
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| Q |
239 |
ggaaattctaccgataaaattatcgaataatagacgaaggggtcacgaagatgcttgggacgcaat |
304 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38483046 |
ggaaattctaccgataaaattatcgaataatagacgaaggggtcacgaagatgcttgggacgcaat |
38482981 |
T |
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