View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1994_low_10 (Length: 320)

Name: NF1994_low_10
Description: NF1994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1994_low_10
NF1994_low_10
[»] chr1 (70 HSPs)
chr1 (15-197)||(49710977-49711159)
chr1 (15-197)||(49714617-49714799)
chr1 (15-197)||(49683367-49683549)
chr1 (15-196)||(49688266-49688447)
chr1 (15-187)||(49215639-49215804)
chr1 (222-303)||(36666544-36666625)
chr1 (222-303)||(23933036-23933117)
chr1 (222-303)||(11333685-11333766)
chr1 (222-303)||(11491706-11491787)
chr1 (222-299)||(31124606-31124683)
chr1 (223-303)||(18607778-18607858)
chr1 (222-301)||(23991232-23991311)
chr1 (226-297)||(45416150-45416221)
chr1 (218-303)||(37280723-37280807)
chr1 (238-303)||(44546042-44546107)
chr1 (222-301)||(47469041-47469120)
chr1 (212-303)||(50118993-50119084)
chr1 (220-303)||(51137805-51137888)
chr1 (234-284)||(3767953-3768003)
chr1 (222-303)||(12048091-12048173)
chr1 (223-298)||(10632720-10632796)
chr1 (225-297)||(11860069-11860141)
chr1 (222-302)||(17058727-17058806)
chr1 (220-303)||(37662522-37662606)
chr1 (220-303)||(42735902-42735986)
chr1 (223-303)||(43021591-43021671)
chr1 (222-297)||(26824218-26824293)
chr1 (222-273)||(44546108-44546159)
chr1 (50-189)||(49725428-49725567)
chr1 (222-303)||(6130000-6130082)
chr1 (223-273)||(7000931-7000981)
chr1 (222-303)||(21265677-21265759)
chr1 (223-301)||(33507891-33507969)
chr1 (226-303)||(42490381-42490459)
chr1 (222-295)||(1247284-1247357)
chr1 (226-299)||(19564125-19564197)
chr1 (218-303)||(24874992-24875077)
chr1 (226-303)||(24910450-24910527)
chr1 (222-303)||(30245992-30246073)
chr1 (218-295)||(33843159-33843236)
chr1 (218-295)||(33950743-33950820)
chr1 (222-287)||(39670797-39670862)
chr1 (221-297)||(25036229-25036305)
chr1 (221-297)||(25041441-25041517)
chr1 (222-302)||(31401213-31401293)
chr1 (222-301)||(34557291-34557371)
chr1 (212-303)||(51942316-51942407)
chr1 (246-282)||(52164391-52164427)
chr1 (218-301)||(26909834-26909917)
chr1 (222-304)||(37403092-37403175)
chr1 (222-303)||(9866151-9866233)
chr1 (244-302)||(11249440-11249498)
chr1 (222-303)||(12502221-12502303)
chr1 (222-303)||(13773189-13773271)
chr1 (222-303)||(22563407-22563489)
chr1 (222-303)||(32594272-32594354)
chr1 (214-303)||(35605582-35605672)
chr1 (218-303)||(16997223-16997308)
chr1 (218-303)||(27972165-27972249)
chr1 (223-303)||(33207226-33207307)
chr1 (222-303)||(34562755-34562836)
chr1 (222-299)||(41927001-41927078)
chr1 (222-270)||(45371767-45371816)
chr1 (225-302)||(51033986-51034063)
chr1 (220-296)||(3742283-3742359)
chr1 (220-303)||(8741494-8741578)
chr1 (222-273)||(18216957-18217009)
chr1 (217-284)||(27234027-27234095)
chr1 (223-294)||(40211493-40211565)
chr1 (52-84)||(49728880-49728912)
[»] chr7 (53 HSPs)
chr7 (223-301)||(41331048-41331126)
chr7 (222-302)||(7836904-7836984)
chr7 (222-302)||(45284787-45284867)
chr7 (222-301)||(36931996-36932075)
chr7 (220-302)||(12007761-12007842)
chr7 (220-303)||(40518855-40518938)
chr7 (222-303)||(23274782-23274863)
chr7 (219-295)||(10363384-10363460)
chr7 (223-299)||(47070278-47070354)
chr7 (225-301)||(47194395-47194471)
chr7 (232-303)||(7876020-7876090)
chr7 (222-303)||(1563706-1563788)
chr7 (214-303)||(9712157-9712247)
chr7 (218-299)||(22548236-22548317)
chr7 (234-303)||(37411717-37411786)
chr7 (221-301)||(22774063-22774143)
chr7 (223-286)||(25155579-25155642)
chr7 (218-301)||(27788292-27788375)
chr7 (218-301)||(27791448-27791531)
chr7 (222-301)||(28059769-28059848)
chr7 (222-284)||(35683094-35683157)
chr7 (204-303)||(38151365-38151464)
chr7 (218-303)||(32086114-32086200)
chr7 (222-303)||(4611260-4611340)
chr7 (226-299)||(4886864-4886936)
chr7 (225-302)||(7778967-7779044)
chr7 (222-302)||(15074870-15074950)
chr7 (222-303)||(35499558-35499639)
chr7 (212-301)||(41854020-41854109)
chr7 (222-303)||(47542945-47543025)
chr7 (212-303)||(36391861-36391953)
chr7 (222-284)||(7525484-7525547)
chr7 (225-303)||(9877237-9877316)
chr7 (222-301)||(12935763-12935842)
chr7 (225-303)||(23102528-23102607)
chr7 (222-284)||(32047129-32047192)
chr7 (222-284)||(35815878-35815941)
chr7 (218-284)||(46758282-46758349)
chr7 (222-272)||(12771673-12771723)
chr7 (222-303)||(35950149-35950231)
chr7 (222-303)||(42443710-42443792)
chr7 (222-283)||(43119399-43119461)
chr7 (223-284)||(1398872-1398933)
chr7 (234-303)||(9497987-9498056)
chr7 (222-303)||(15021179-15021260)
chr7 (224-284)||(24188510-24188571)
chr7 (222-303)||(27425109-27425190)
chr7 (222-299)||(32750041-32750118)
chr7 (222-302)||(43633057-43633138)
chr7 (222-303)||(47437955-47438036)
chr7 (218-290)||(47440773-47440846)
chr7 (222-273)||(10244856-10244908)
chr7 (201-284)||(24822757-24822840)
[»] chr3 (54 HSPs)
chr3 (222-303)||(4227712-4227793)
chr3 (216-301)||(19222548-19222633)
chr3 (218-303)||(32401512-32401596)
chr3 (222-301)||(24303413-24303492)
chr3 (214-301)||(46844931-46845018)
chr3 (228-303)||(49983682-49983757)
chr3 (218-303)||(38949695-38949780)
chr3 (216-301)||(43280091-43280176)
chr3 (218-302)||(47098538-47098622)
chr3 (222-303)||(32776232-32776314)
chr3 (222-299)||(26880202-26880279)
chr3 (224-303)||(7253490-7253569)
chr3 (222-284)||(48546213-48546276)
chr3 (222-301)||(49443391-49443470)
chr3 (222-303)||(5173978-5174059)
chr3 (226-303)||(48515357-48515434)
chr3 (222-297)||(15005968-15006044)
chr3 (222-298)||(27837292-27837367)
chr3 (218-298)||(35849507-35849587)
chr3 (218-301)||(9685019-9685102)
chr3 (222-301)||(54408518-54408597)
chr3 (222-303)||(3748569-3748651)
chr3 (214-304)||(36729469-36729559)
chr3 (222-303)||(39719956-39720038)
chr3 (225-295)||(41411598-41411668)
chr3 (222-303)||(41936374-41936456)
chr3 (222-303)||(44764743-44764822)
chr3 (222-303)||(52984031-52984113)
chr3 (222-303)||(53432704-53432786)
chr3 (222-299)||(18764836-18764912)
chr3 (218-290)||(25883951-25884024)
chr3 (214-295)||(49284851-49284932)
chr3 (222-303)||(49577390-49577471)
chr3 (224-303)||(8125660-8125740)
chr3 (222-301)||(48722267-48722347)
chr3 (225-303)||(30779537-30779616)
chr3 (222-284)||(32256521-32256584)
chr3 (244-303)||(45647324-45647383)
chr3 (243-303)||(48443140-48443202)
chr3 (222-303)||(13644667-13644749)
chr3 (222-303)||(15299093-15299175)
chr3 (222-303)||(28689639-28689721)
chr3 (223-284)||(32732505-32732567)
chr3 (222-303)||(34102578-34102660)
chr3 (225-303)||(40192177-40192255)
chr3 (218-283)||(41710624-41710690)
chr3 (225-302)||(11995153-11995230)
chr3 (262-303)||(40228362-40228403)
chr3 (222-303)||(52992027-52992108)
chr3 (243-303)||(3614069-3614129)
chr3 (222-273)||(3894595-3894647)
chr3 (222-273)||(22472281-22472333)
chr3 (222-297)||(29531241-29531316)
chr3 (212-303)||(52974010-52974102)
[»] chr4 (56 HSPs)
chr4 (220-303)||(29406378-29406461)
chr4 (218-301)||(23132771-23132853)
chr4 (226-303)||(45139853-45139930)
chr4 (222-301)||(2629602-2629681)
chr4 (222-301)||(51890820-51890899)
chr4 (222-302)||(28465742-28465822)
chr4 (218-303)||(3784933-3785017)
chr4 (222-303)||(23924840-23924921)
chr4 (222-303)||(40809149-40809230)
chr4 (222-301)||(11294806-11294885)
chr4 (222-301)||(31852372-31852451)
chr4 (222-303)||(8965115-8965197)
chr4 (214-303)||(13578424-13578514)
chr4 (222-288)||(38848088-38848154)
chr4 (222-284)||(43905750-43905812)
chr4 (222-284)||(51777884-51777946)
chr4 (226-299)||(12625854-12625927)
chr4 (224-297)||(13088936-13089009)
chr4 (222-299)||(42664006-42664083)
chr4 (214-298)||(43627221-43627305)
chr4 (218-297)||(46791172-46791251)
chr4 (222-298)||(49264552-49264628)
chr4 (222-304)||(42134424-42134507)
chr4 (220-303)||(55055937-55056020)
chr4 (253-303)||(26250668-26250718)
chr4 (226-284)||(32760682-32760740)
chr4 (223-303)||(21935498-21935579)
chr4 (222-303)||(27091441-27091521)
chr4 (223-303)||(42395248-42395329)
chr4 (263-303)||(22530161-22530201)
chr4 (225-284)||(56087924-56087984)
chr4 (222-284)||(2222579-2222642)
chr4 (222-273)||(12921997-12922048)
chr4 (244-303)||(25224493-25224552)
chr4 (222-301)||(40486464-40486543)
chr4 (222-284)||(55021594-55021657)
chr4 (222-303)||(4700905-4700987)
chr4 (200-250)||(8282416-8282466)
chr4 (217-302)||(11375851-11375937)
chr4 (223-284)||(12775207-12775269)
chr4 (222-303)||(13264241-13264323)
chr4 (222-303)||(19963803-19963885)
chr4 (222-303)||(27103068-27103150)
chr4 (198-304)||(32287485-32287590)
chr4 (222-303)||(37935882-37935964)
chr4 (234-284)||(44195605-44195654)
chr4 (222-284)||(44568187-44568249)
chr4 (222-303)||(49056796-49056878)
chr4 (222-303)||(49901503-49901585)
chr4 (222-299)||(32293133-32293210)
chr4 (223-303)||(33933707-33933788)
chr4 (222-302)||(39697830-39697910)
chr4 (222-303)||(42002327-42002408)
chr4 (223-303)||(5326512-5326592)
chr4 (262-302)||(13734969-13735009)
chr4 (222-273)||(29505702-29505754)
[»] chr2 (34 HSPs)
chr2 (222-303)||(32189970-32190051)
chr2 (218-298)||(3596276-3596356)
chr2 (204-303)||(14664005-14664103)
chr2 (222-301)||(44666311-44666390)
chr2 (227-306)||(45523399-45523478)
chr2 (222-303)||(20919631-20919712)
chr2 (218-303)||(23919441-23919526)
chr2 (219-295)||(13242696-13242772)
chr2 (223-301)||(1964376-1964454)
chr2 (226-299)||(44558027-44558100)
chr2 (229-301)||(41246409-41246481)
chr2 (212-299)||(3154022-3154109)
chr2 (210-301)||(24581420-24581511)
chr2 (222-303)||(17078478-17078560)
chr2 (218-280)||(22333819-22333881)
chr2 (222-303)||(33228900-33228982)
chr2 (234-303)||(15764951-15765020)
chr2 (222-284)||(16385009-16385072)
chr2 (222-269)||(16904828-16904875)
chr2 (222-284)||(28153109-28153172)
chr2 (222-284)||(38557190-38557253)
chr2 (225-303)||(44948617-44948696)
chr2 (222-303)||(1844838-1844920)
chr2 (222-303)||(3438969-3439051)
chr2 (222-303)||(17034756-17034838)
chr2 (222-303)||(18278384-18278466)
chr2 (218-303)||(2132737-2132822)
chr2 (234-295)||(17777143-17777204)
chr2 (246-303)||(23405217-23405274)
chr2 (222-273)||(5613005-5613057)
chr2 (222-269)||(7281656-7281704)
chr2 (247-299)||(15575003-15575055)
chr2 (218-250)||(19958170-19958202)
chr2 (225-284)||(34149650-34149710)
[»] scaffold0519 (1 HSPs)
scaffold0519 (222-301)||(2930-3009)
[»] chr8 (42 HSPs)
chr8 (222-301)||(11231443-11231522)
chr8 (222-302)||(12770390-12770470)
chr8 (225-303)||(481032-481110)
chr8 (222-303)||(27077064-27077146)
chr8 (222-303)||(15856474-15856555)
chr8 (222-303)||(25824870-25824951)
chr8 (230-303)||(25890380-25890453)
chr8 (222-301)||(25812177-25812256)
chr8 (222-301)||(31406780-31406859)
chr8 (226-301)||(38283147-38283222)
chr8 (221-304)||(41272114-41272197)
chr8 (220-301)||(550324-550405)
chr8 (225-302)||(20872430-20872506)
chr8 (222-303)||(22274579-22274660)
chr8 (228-297)||(22717818-22717887)
chr8 (222-301)||(20894667-20894745)
chr8 (222-284)||(33473322-33473385)
chr8 (222-297)||(43846962-43847037)
chr8 (225-302)||(36433557-36433635)
chr8 (225-303)||(44444565-44444643)
chr8 (222-303)||(30676272-30676353)
chr8 (218-270)||(2114937-2114989)
chr8 (222-298)||(3187385-3187461)
chr8 (223-302)||(43980281-43980361)
chr8 (220-302)||(2792801-2792884)
chr8 (222-284)||(23261341-23261404)
chr8 (222-284)||(38774111-38774174)
chr8 (222-303)||(5328534-5328616)
chr8 (222-303)||(8265289-8265371)
chr8 (222-303)||(17698543-17698625)
chr8 (222-295)||(29733972-29734046)
chr8 (222-303)||(31450924-31451006)
chr8 (222-303)||(34894390-34894472)
chr8 (222-303)||(38219535-38219617)
chr8 (198-295)||(40393347-40393445)
chr8 (223-284)||(43053853-43053915)
chr8 (213-303)||(44156733-44156822)
chr8 (222-259)||(3949049-3949086)
chr8 (230-303)||(26796979-26797051)
chr8 (218-299)||(26823695-26823776)
chr8 (229-285)||(3828356-3828412)
chr8 (263-303)||(18412577-18412617)
[»] chr6 (31 HSPs)
chr6 (222-303)||(24319034-24319115)
chr6 (224-304)||(607007-607087)
chr6 (225-303)||(17534868-17534946)
chr6 (218-303)||(23610283-23610368)
chr6 (222-303)||(32788822-32788903)
chr6 (225-298)||(31952295-31952368)
chr6 (222-303)||(34268303-34268384)
chr6 (220-289)||(35038668-35038737)
chr6 (234-304)||(978114-978184)
chr6 (222-303)||(2488855-2488935)
chr6 (222-299)||(32620039-32620116)
chr6 (225-303)||(3294785-3294864)
chr6 (230-301)||(7771310-7771381)
chr6 (222-284)||(8297667-8297730)
chr6 (222-284)||(10517239-10517302)
chr6 (218-284)||(18904305-18904372)
chr6 (218-273)||(29646512-29646567)
chr6 (222-284)||(33646875-33646938)
chr6 (222-303)||(2500481-2500563)
chr6 (214-303)||(9372160-9372250)
chr6 (222-303)||(12284142-12284224)
chr6 (237-303)||(15091469-15091535)
chr6 (222-303)||(22997357-22997439)
chr6 (222-303)||(23790962-23791044)
chr6 (225-303)||(32283559-32283637)
chr6 (222-303)||(15305072-15305153)
chr6 (265-302)||(32388248-32388285)
chr6 (222-290)||(8443573-8443641)
chr6 (222-290)||(8452377-8452445)
chr6 (222-273)||(30705011-30705063)
chr6 (263-303)||(30938409-30938449)
[»] chr5 (45 HSPs)
chr5 (210-303)||(28758373-28758467)
chr5 (210-299)||(24456214-24456302)
chr5 (218-290)||(7171762-7171834)
chr5 (214-303)||(20145524-20145613)
chr5 (218-303)||(33018490-33018574)
chr5 (220-303)||(4068003-4068086)
chr5 (220-303)||(28822722-28822805)
chr5 (222-303)||(6558822-6558904)
chr5 (223-301)||(37684515-37684593)
chr5 (223-303)||(19985521-19985602)
chr5 (222-303)||(41083506-41083586)
chr5 (222-290)||(8571827-8571895)
chr5 (263-302)||(7462851-7462890)
chr5 (223-301)||(37553894-37553972)
chr5 (222-303)||(436529-436610)
chr5 (222-303)||(12474003-12474083)
chr5 (226-303)||(20430586-20430663)
chr5 (218-303)||(24477846-24477931)
chr5 (223-303)||(42916410-42916491)
chr5 (221-301)||(17693153-17693232)
chr5 (218-284)||(3740994-3741061)
chr5 (222-301)||(12053479-12053558)
chr5 (222-284)||(15241436-15241499)
chr5 (222-284)||(22228929-22228992)
chr5 (222-284)||(36124439-36124502)
chr5 (225-303)||(3198348-3198426)
chr5 (222-303)||(11897269-11897351)
chr5 (226-284)||(15210830-15210888)
chr5 (222-283)||(18050220-18050282)
chr5 (222-303)||(18928741-18928823)
chr5 (226-284)||(23292389-23292447)
chr5 (222-303)||(36888362-36888444)
chr5 (222-303)||(43580899-43580981)
chr5 (222-270)||(3515433-3515482)
chr5 (224-284)||(9958617-9958678)
chr5 (222-299)||(19655940-19656017)
chr5 (220-301)||(23155916-23155997)
chr5 (212-284)||(25729397-25729470)
chr5 (222-303)||(32550197-32550278)
chr5 (222-303)||(33735984-33736063)
chr5 (223-303)||(3166002-3166082)
chr5 (254-290)||(3294114-3294150)
chr5 (220-299)||(7443364-7443444)
chr5 (225-284)||(13621916-13621976)
chr5 (225-273)||(34208425-34208473)
[»] scaffold0154 (1 HSPs)
scaffold0154 (218-302)||(28785-28869)
[»] scaffold0250 (1 HSPs)
scaffold0250 (207-303)||(15026-15122)
[»] scaffold0257 (1 HSPs)
scaffold0257 (225-302)||(21816-21893)
[»] scaffold0264 (1 HSPs)
scaffold0264 (214-301)||(20300-20387)
[»] scaffold0088 (1 HSPs)
scaffold0088 (222-303)||(10793-10875)
[»] scaffold0517 (1 HSPs)
scaffold0517 (222-304)||(4901-4984)
[»] scaffold0246 (1 HSPs)
scaffold0246 (222-301)||(24403-24482)
[»] scaffold0117 (1 HSPs)
scaffold0117 (222-302)||(18446-18527)


Alignment Details
Target: chr1 (Bit Score: 155; Significance: 3e-82; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 49710977 - 49711159
Alignment:
Q  15 gaacattaaggttgaaattgattgttctagcgagttatattttccacactggatttacaagcgtcttgaattgaatcaggatcttggactcaagtgtatt 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49710977 gaacattaaggttgaagttgattgttctagcgagttatattttccacactggatttacaagcgtcttgaattgaatcaggatcttggactcaagagtatt 49711076  T
Q  115 aaaaatgaaattgatgaagaaatggtcagaaaaatgacaatggtgagtttatggtgcatacaaactgacccttcacatcgacc 197  Q
    |||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||||||||    
T  49711077 aaaaatgaaaatgatgaagaaatggtcagaaaaatgtcagtggtgagtttatggtgcatacaaaccgacccttctcatcgacc 49711159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 49714617 - 49714799
Alignment:
Q  15 gaacattaaggttgaaattgattgttctagcgagttatattttccacactggatttacaagcgtcttgaattgaatcaggatcttggactcaagtgtatt 114  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||    
T  49714617 gaacattaaggttgaagttgattgttccagcgagttatattttccacactggatttacaagcgtcttgaattgaatcaggatcttgaactgaggtgtatt 49714716  T
Q  115 aaaaatgaaattgatgaagaaatggtcagaaaaatgacaatggtgagtttatggtgcatacaaactgacccttcacatcgacc 197  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  49714717 aaaaatgaaattgatgaagaaatggtaagaaaaatgacagtggtgagtttatggtgcatacgaactgacccttcgcatcgacc 49714799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 49683367 - 49683549
Alignment:
Q  15 gaacattaaggttgaaattgattgttctagcgagttatattttccacactggatttacaagcgtcttgaattgaatcaggatcttggactcaagtgtatt 114  Q
    |||||| || |||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  49683367 gaacatcaaagttgaagtggattgttctagcgagttatattttccacattggatctacaagcgtcttgaattgaatcaagatcttggactcaagtgtatt 49683466  T
Q  115 aaaaatgaaattgatgaagaaatggtcagaaaaatgacaatggtgagtttatggtgcatacaaactgacccttcacatcgacc 197  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  49683467 aaaaatgaaattgatgaagagatggtaagaaagatgacaatggtgagtttatggtgcataccaaccgacccttcacatcgacc 49683549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 49688266 - 49688447
Alignment:
Q  15 gaacattaaggttgaaattgattgttctagcgagttatattttccacactggatttacaagcgtcttgaattgaatcaggatcttggactcaagtgtatt 114  Q
    |||||| || |||||| | |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  49688266 gaacatcaaagttgaagtggattgttctagcgatttatattttccacattggatttacaagcgtcttgaattgaatcaagatcttggactcaagtctatt 49688365  T
Q  115 aaaaatgaaattgatgaagaaatggtcagaaaaatgacaatggtgagtttatggtgcatacaaactgacccttcacatcgac 196  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||| || |||||||| ||||    
T  49688366 aaaaatgaaaatgatgaagaaatggtaagaaaaatgacagtggtgagtttatggtgcatacaaaccgatccttcacaccgac 49688447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 49215639 - 49215804
Alignment:
Q  15 gaacattaaggttgaaattgattgttctagcgagttatattttccacactggatttacaagcgtcttgaattgaatcaggatcttggactcaagtgtatt 114  Q
    |||||||||||||||| |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49215639 gaacattaaggttgaagttgattg-------gagtaatattttccacactggatttacaagcgtcttgaattgaatcaggatcttggactcaggtgtatt 49215731  T
Q  115 aaaaatgaaattgatgaagaaatggtcagaaaaatgacaatggtgagtttatggtgcatacaaactgaccctt 187  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||    
T  49215732 aaaaatgaaattgatgaagaaatggtaagaaaaatgacagtggtgagtttatggtgcatacaaacagaccctt 49215804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 36666544 - 36666625
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||||| |||||||| |||||||||  |||||||||||  ||||||||||||||| ||||||||||||    
T  36666544 gagctcacacaattaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctac 36666625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 23933036 - 23933117
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||| ||||||||||||||||||| ||||| || | |||||||||||| ||||  ||||||||||||||||||||||    
T  23933036 gagctcacataattaattgtagagaagtggggtgttcgaagttcgaaccccgacccctagataaattatacaatgtccctac 23933117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 11333766 - 11333685
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| ||| |||||||| |||||||||  ||||||| |||  ||||||||||||||| ||||||||||||    
T  11333766 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctac 11333685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 11491787 - 11491706
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| ||| |||||||| |||||||||  ||||||| |||  ||||||||||||||| ||||||||||||    
T  11491787 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctac 11491706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 31124606 - 31124683
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    |||||||||||||||| ||| |||||||| ||| |||||| |||||||||||  ||||||||||||||| ||||||||    
T  31124606 gagctcacacaattaaatgtggagaagtggggtatccggagttcgaaccccggcccctgcataaattatgcaatgtcc 31124683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 18607778 - 18607858
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||||| |||||||||||| ||||| |||  ||||||||||   ||||||||||||||| ||||||||||||    
T  18607778 agctcacacaattaaatgtagagaagtggggtgttcggggttcgaaccccagcccctgcataaattatgcaatgtccctac 18607858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 23991232 - 23991311
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||| ||| |||||||| ||||||| |  |||||||||||  ||||||||||||||| ||||||||||    
T  23991232 gagctcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccggcccctgcataaattatgcaatgtccct 23991311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 297
Target Start/End: Original strand, 45416150 - 45416221
Alignment:
Q  226 tcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgt 297  Q
    |||||||||||| ||| |||||||| ||||||||| ||||||||||||  ||||||||||||||| ||||||    
T  45416150 tcacacaattaaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcataaattatgcaatgt 45416221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 37280807 - 37280723
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||||| ||| |||||||| |||| ||||| |||||| ||||| ||||  ||||||||| ||||||||||||    
T  37280807 gctggagctcacacaattaaatgtggagaagtggggtg-ccggagttcgaatcccgacccctatataaattatgcaatgtccctac 37280723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 303
Target Start/End: Complemental strand, 44546107 - 44546042
Alignment:
Q  238 ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||| |||||||| ||||||| || ||||||||  |||||||||||||||||||||||||||||||    
T  44546107 ttgtggagaagtggggtgtccagagttcgaaccgtgatccctgcataaattatacaatgtccctac 44546042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 47469041 - 47469120
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||| ||| |||||||| |||||||||  |||||||| |   ||||||||||||||| ||||||||||    
T  47469041 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcagcccctgcataaattatgcaatgtccct 47469120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 303
Target Start/End: Complemental strand, 50119084 - 50118993
Alignment:
Q  212 ccagtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||| ||| |||||||||||||||| ||| |||||||| |||||||||  ||||||| |||| ||||||||||| |||  | |||||||||    
T  50119084 ccagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccgacccctgcataaaatatggattgtccctac 50118993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 51137888 - 51137805
Alignment:
Q  220 tggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||| |||| |||| ||| |||||||| | ||||| || ||||||| |||  ||||||||||||||||||||||||||||    
T  51137888 tggagctcgcacatttaaatgtggagaagtgggatgtccagagttcgaactccggcccctgcataaattatacaatgtccctac 51137805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 3767953 - 3768003
Alignment:
Q  234 ttaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  3767953 ttaattgtagagaagtggggtgtccggaattcgaaccccaacccctgcata 3768003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 12048091 - 12048173
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||| ||||||||| |||||||||||   ||||||||| | |||||||| |||||||    
T  12048091 gagctcacacaatttaattgtggagaagtggggtgtccgggattcgaaccccagcccctgcatataatatacaatatccctac 12048173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 10632796 - 10632720
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtgg-tgtccggaattcgaaccccgatccctgcataaattatacaatgtc 298  Q
    |||||||||| |||| ||| |||||||| || |||||||  |||||||||||| ||||||||||||||| |||||||    
T  10632796 agctcacacatttaaatgtggagaagtgggggtgtccggggttcgaaccccgacccctgcataaattatgcaatgtc 10632720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 11860141 - 11860069
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgt 297  Q
    ||||||||||||| ||| |||||||| |||||||||  |||||||||||| ||||  ||||||||| ||||||    
T  11860141 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccgacccctatataaattatgcaatgt 11860069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 17058806 - 17058727
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||||||||||||||||| |||||||| ||||||||| |||| ||| | || |||| | |||||||| |||||||||||    
T  17058806 gagctcacacaattaattgtggagaagtggggtgtccgggattcaaactcagacccct-cttaaattatgcaatgtcccta 17058727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 37662522 - 37662606
Alignment:
Q  220 tggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| || |||||||||||| |||||||||  |||| ||||||| ||||||||| | ||| |||| |||||||    
T  37662522 tggagctcacacaatttaactgtagagaagtggggtgtccggggttcgtaccccgacccctgcatataatatgcaatatccctac 37662606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 42735986 - 42735902
Alignment:
Q  220 tggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||| || || |||||||||||| |||||||||||||| ||||| || ||||||||| ||||| || | |||||||    
T  42735986 tggagctcacacattttaaatgtagagaagtggggtgtccggaattcaaacccagacccctgcatatattatgcattttccctac 42735902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 43021591 - 43021671
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||| ||||| ||| |||||||| ||||||||   |||||||||||| ||||||||||| ||| || |||||||||    
T  43021591 agctcacacgattaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcataaaatatgcattgtccctac 43021671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 26824293 - 26824218
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgt 297  Q
    |||||||||||||||| ||| ||||||| ||||| ||||| |||||||| ||  |||||||||| |||| ||||||    
T  26824293 gagctcacacaattaaatgtggagaagtatggtgcccggagttcgaacctcggcccctgcataagttatgcaatgt 26824218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 44546159 - 44546108
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccg 273  Q
    ||||| |||||||||||||| |||||||| ||||||||| ||||||||||||    
T  44546159 gagcttacacaattaattgtggagaagtggggtgtccgggattcgaaccccg 44546108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 49725428 - 49725567
Alignment:
Q  50 tatattttccacactggatttacaagcgtcttgaattgaatcaggatcttggactcaagtgtattaaaaatgaaattgatgaagaaatggtcagaaaaat 149  Q
    |||||||||| || ||||||||||| |||||||| |  ||||||||||||||  |   |  | | | ||||||||||||||| |||| ||| ||||| ||    
T  49725428 tatattttcctcattggatttacaaccgtcttgattcaaatcaggatcttggtttacggaatgtaagaaatgaaattgatgacgaaaaggtgagaaagat 49725527  T
Q  150 gacaatggtgagtttatggtgcatacaaactgacccttca 189  Q
    |||||| |||  | ||||||||||||||||  ||||||||    
T  49725528 gacaatagtggctctatggtgcatacaaaccaacccttca 49725567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 6130000 - 6130082
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  ||||||||| ||||||||||||  |||||||| | ||| |||| |||||||    
T  6130000 gagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccgactcctgcatataatatgcaatatccctac 6130082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 7000931 - 7000981
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccg 273  Q
    ||||||||||||||| ||| |||||||| |||||||||| |||||||||||    
T  7000931 agctcacacaattaaatgtggagaagtggggtgtccggagttcgaaccccg 7000981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 21265759 - 21265677
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  21265759 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 21265677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 33507969 - 33507891
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||||||| | || ||||||| ||||| | |  ||||||| | || ||||||||||||||||||||||||||    
T  33507969 agctcacacaattaaatataaagaagtggggtgttcagggttcgaactctgacccctgcataaattatacaatgtccct 33507891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 303
Target Start/End: Original strand, 42490381 - 42490459
Alignment:
Q  226 tcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||| |||||| |||||||| |||||||||  |||||||||||| ||||||||| | ||| |||| |||||||    
T  42490381 tcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctac 42490459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 295
Target Start/End: Complemental strand, 1247357 - 1247284
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaat 295  Q
    ||||||| |||||||| ||| |||||||| |||||| ||  |||||||| ||| ||||||||||||||| ||||    
T  1247357 gagctcaaacaattaaatgtggagaagtgaggtgtctggggttcgaacctcgacccctgcataaattatgcaat 1247284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 19564125 - 19564197
Alignment:
Q  226 tcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    |||||||||||| ||| |||||||| ||||||||   |||||||||||  ||||||||||||||| ||||||||    
T  19564125 tcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccccg-gccctgcataaattatgcaatgtcc 19564197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 24875077 - 24874992
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||||| | | |||||||| ||||||||   ||||||||||   || |||||||||||| |||| |||||||    
T  24875077 gctggagctcacacaattaaatatggagaagtggggtgtccgaggttcgaacccctgcccatgcataaattatgcaatatccctac 24874992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 303
Target Start/End: Original strand, 24910450 - 24910527
Alignment:
Q  226 tcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||| | | ||||||||  ||||||||  ||||||||| || ||||||||||||||| |||| |||||||    
T  24910450 tcacacaattaaatatggagaagtggagtgtccggggttcgaaccctgacccctgcataaattatgcaatatccctac 24910527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 30245992 - 30246073
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||| |||||||| ||| |||||||| ||| | |||  |||||| ||||| |||||||| |||||| ||||||||||||    
T  30245992 gagctcatacaattaaatgtggagaagtggggtattcggggttcgaatcccgacccctgcatcaattatgcaatgtccctac 30246073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 33843159 - 33843236
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaat 295  Q
    ||||||||||||||||||||  ||  ||||||| ||||| |||  |||||||||||| | ||||||||||||| ||||    
T  33843159 gctggagctcacacaattaaacgtgaagaagtggggtgttcggggttcgaaccccgacctctgcataaattatgcaat 33843236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 33950820 - 33950743
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaat 295  Q
    ||||||||||||||||||||  ||  ||||||| ||||| |||  |||||||||||| | ||||||||||||| ||||    
T  33950820 gctggagctcacacaattaaacgtgaagaagtggggtgttcggggttcgaaccccgacctctgcataaattatgcaat 33950743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 39670797 - 39670862
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaat 287  Q
    |||||||||||||||| ||| |||||||| | |||| ||| |||||||||| | ||||||||||||    
T  39670797 gagctcacacaattaaatgtggagaagtgggatgtctggagttcgaaccccaacccctgcataaat 39670862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 297
Target Start/End: Original strand, 25036229 - 25036305
Alignment:
Q  221 ggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgt 297  Q
    ||||||||||||||||| ||| ||||| || ||||| |||  |||||| ||||  ||||||||||||||| ||||||    
T  25036229 ggagctcacacaattaaatgtggagaaatggggtgttcggggttcgaatcccggcccctgcataaattatgcaatgt 25036305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 297
Target Start/End: Original strand, 25041441 - 25041517
Alignment:
Q  221 ggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgt 297  Q
    ||||||||||||||||| ||| ||||| || ||||| |||  |||||| ||||  ||||||||||||||| ||||||    
T  25041441 ggagctcacacaattaaatgtggagaaatggggtgttcggggttcgaatcccggcccctgcataaattatgcaatgt 25041517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 31401213 - 31401293
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    ||||||||||| |||||||| |||| ||| |||||||||  || ||||| ||   |||||||||||||| |||||||||||    
T  31401213 gagctcacacagttaattgtggagacgtggggtgtccggggtttgaacctcggctcctgcataaattatgcaatgtcccta 31401293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 34557291 - 34557371
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaa-ttatacaatgtccct 301  Q
    ||||||||||| |||| ||| |||||||  |||||||   ||||||||||||| ||||||||||| |||| ||||||||||    
T  34557291 gagctcacacatttaaatgtggagaagtagggtgtccaagattcgaaccccgacccctgcataaatttatgcaatgtccct 34557371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 303
Target Start/End: Complemental strand, 51942407 - 51942316
Alignment:
Q  212 ccagtagctggagctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||| ||| |||||||||||||||| |||| |||||||| |||||||||  |||||||||||| ||||| ||| | ||| |||| |||||||    
T  51942407 ccagtggctagagctcacacaattaaattgtggagaagtggggtgtccggggttcgaaccccga-ccctgtatataatatgcaatatccctac 51942316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 52164391 - 52164427
Alignment:
Q  246 aagtgtggtgtccggaattcgaaccccgatccctgca 282  Q
    ||||| |||||||||||||||||||||||||||||||    
T  52164391 aagtggggtgtccggaattcgaaccccgatccctgca 52164427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 26909834 - 26909917
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||| |||||||||| |||| ||| |||||||| ||||||| |  ||||||||||   | ||||||||||||| ||||||||||    
T  26909834 gctgaagctcacacatttaaatgtggagaagtggggtgtccagggttcgaacccccgcctctgcataaattatgcaatgtccct 26909917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 304
Target Start/End: Original strand, 37403092 - 37403175
Alignment:
Q  222 gagctcacacaatta-attgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctact 304  Q
    ||||||||||||||| ||||| ||||||||  ||||||||  ||| ||| || ||||||||||| ||||| |||| ||||||||    
T  37403092 gagctcacacaattatattgtggagaagtgaagtgtccggggttcaaactccaatccctgcatatattatgcaatatccctact 37403175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 9866151 - 9866233
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| || |||||  |||| ||| ||||||||||||| ||||||||| | ||| |||| |||||||    
T  9866151 gagctcacacaatttaattgtggaaaagtggagtgttcgggattcgaaccccgacccctgcatataatatgcaatatccctac 9866233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 11249440 - 11249498
Alignment:
Q  244 agaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    ||||||||||||| |||  ||  |||||||| ||||||||||||||| |||||||||||    
T  11249440 agaagtgtggtgttcggggtttaaaccccgacccctgcataaattatgcaatgtcccta 11249498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 12502221 - 12502303
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  ||||||||  ||||||||||||  |||||||| | ||| |||| |||||||    
T  12502221 gagctcacacaatttaattgtggagaagtggagtgtccgggtttcgaaccccgactcctgcatataatatgcaatatccctac 12502303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 13773271 - 13773189
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  |||||||| ||||||||||||   |||||||| | ||| |||| |||||||    
T  13773271 gagctcacacaatttaattgtggagaagtggagtgtccgggattcgaaccccggctcctgcatataatatgcaatatccctac 13773189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 22563489 - 22563407
Alignment:
Q  222 gagctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| |||| ||||||||  ||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  22563489 gagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 22563407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 32594354 - 32594272
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  ||||||||  ||||||||||||  |||||||| | ||| |||| |||||||    
T  32594354 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctac 32594272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 35605582 - 35605672
Alignment:
Q  214 agtagctggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||| |||||||||||||| |||||| |||||||| |||||   |  |||||||||||| ||||||||| | ||| |||| |||||||    
T  35605582 agtagctagagctcacacaatttaattgtggagaagtggggtgtttagggttcgaaccccgacccctgcatataatatgcaatatccctac 35605672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 16997223 - 16997308
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||| ||||||||||||| | ||| |||||||| |||||||||  |||||||| ||  ||||||||||| ||| || |||| ||||    
T  16997223 gctgaagctcacacaattgaatgtggagaagtgaggtgtccggggttcgaacctcggcccctgcataaaatatgcattgtctctac 16997308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 27972165 - 27972249
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||| ||||||||||||||| |||||| ||||| ||| |||||| |||||| ||||  | || |||||| ||| ||||||||||||    
T  27972165 gctgaagctcacacaattaaatgtagataagtggggtttccggagttcgaagcccggccgctacataaa-tatgcaatgtccctac 27972249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 33207307 - 33207226
Alignment:
Q  223 agctcacacaa-ttaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||| ||| |||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  33207307 agctcacacaacttatttgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 33207226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 34562755 - 34562836
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| | | |||||||| |||||||||  |||||||| ||  ||||| |||||||||  ||| |||||||    
T  34562755 gagctcacacaattaaatatggagaagtggggtgtccggggttcgaacctcggcccctgtataaattatgtaatatccctac 34562836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 41927078 - 41927001
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    |||||||||||||||| ||| |||||||  ||||||||| ||||||| | |   ||| ||||||||||| ||||||||    
T  41927078 gagctcacacaattaaatgtggagaagtaaggtgtccgggattcgaatctcagccccagcataaattatgcaatgtcc 41927001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 45371816 - 45371767
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaacc 270  Q
    |||||||||||||| |||| | |||||||||||||| |||||||||||||    
T  45371816 gagctcacacaatttaattatggagaagtgtggtgttcggaattcgaacc 45371767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 51034063 - 51033986
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    ||||||||||||| ||| |||||||| | |||||| | |||||||  |||  ||||||||||||||  ||||||||||    
T  51034063 ctcacacaattaaatgtggagaagtgagatgtccgaatttcgaacttcgactcctgcataaattatgtaatgtcccta 51033986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 3742283 - 3742359
Alignment:
Q  220 tggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatg 296  Q
    |||| ||||||||  ||| ||| |||||||| |||||||||  |||||||||||| ||||| |||||| || |||||    
T  3742283 tggaactcacacatgtaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgtataaatcatgcaatg 3742359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 8741578 - 8741494
Alignment:
Q  220 tggagctcacacaat-taattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||| | ||| ||| |||||||| |||||| ||  ||||||||||   |||||||||||||||  |||||||||||    
T  8741578 tggagctcacacattataaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgtaatgtccctac 8741494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 18217009 - 18216957
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccg 273  Q
    |||||||||||||| |||||||||||||||  ||||||||  |||||||||||    
T  18217009 gagctcacacaatttaattgtagagaagtggagtgtccggggttcgaaccccg 18216957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 284
Target Start/End: Complemental strand, 27234095 - 27234027
Alignment:
Q  217 agctggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||| |||||||||||||| |||||| ||||||||  |||| ||| ||||||||||||  |||||||||    
T  27234095 agctagagctcacacaatttaattgtggagaagtggagtgttcgggattcgaaccccggcccctgcata 27234027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 294
Target Start/End: Original strand, 40211493 - 40211565
Alignment:
Q  223 agctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaa 294  Q
    ||||||||||||| |||||| ||||||||  ||||||||  ||||||||||||  |||||||| | |||||||    
T  40211493 agctcacacaatttaattgtggagaagtgaagtgtccggggttcgaaccccgactcctgcatataatatacaa 40211565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 49728880 - 49728912
Alignment:
Q  52 tattttccacactggatttacaagcgtcttgaa 84  Q
    ||||||||||| |||||||||||||||||||||    
T  49728880 tattttccacaatggatttacaagcgtcttgaa 49728912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 5e-25; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 41331048 - 41331126
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  41331048 agctcacacaattaaatgtggagaagtggggtgtccggaattcgaaccccgacccctgcataaattatgcaatgtccct 41331126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 7836904 - 7836984
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||||||||||||| ||| ||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  7836904 gagctcacacaattaaatgtggagaagtggtgtgttcggagttcgaaccccgatccctgcataaattatacaatgtcccta 7836984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 45284787 - 45284867
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||||||||||||| ||| |||||||| |||||||||  |||||||||||| ||||||||||||||| |||||||||||    
T  45284787 gagctcacacaattaaatgttgagaagtggggtgtccggggttcgaaccccgacccctgcataaattattcaatgtcccta 45284867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 36932075 - 36931996
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||| |||||||||||| |||||||||  |||||||||||  ||||||||||||||| ||||||||||    
T  36932075 gagctcacacaattaaatgtagagaagtggggtgtccggggttcgaaccccggaccctgcataaattatgcaatgtccct 36931996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 220 - 302
Target Start/End: Original strand, 12007761 - 12007842
Alignment:
Q  220 tggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||||||||||||||||||| |||||||| | |||||||  ||||||||||   |||||||||||||||||||||||||||    
T  12007761 tggagctcacacaattaattgtggagaagtgag-tgtccggggttcgaaccccagcccctgcataaattatacaatgtcccta 12007842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 40518855 - 40518938
Alignment:
Q  220 tggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||| ||| |||||||| |||||||||| |||||| ||| | |||| |||| ||||| ||||||||||||    
T  40518855 tggagctcacacaattaaatgtggagaagtggggtgtccggagttcgaatcccaacccctacatatattatgcaatgtccctac 40518938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 23274782 - 23274863
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||||| || || || |||||||||  ||||||| |||  ||||||||||||||| ||||||||||||    
T  23274782 gagctcacacaattaattgtggaaaaatggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctac 23274863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 10363384 - 10363460
Alignment:
Q  219 ctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaat 295  Q
    |||||||||||||| |||| ||| |||||||| ||||| | || ||||||| |||| ||||||||||||||||||||    
T  10363384 ctggagctcacacatttaaatgtggagaagtgaggtgttcagacttcgaactccgacccctgcataaattatacaat 10363460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 47070278 - 47070354
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    |||||||||||||||||||||||||||| | ||| | |  ||||||||||| |||||| ||||||||| ||||||||    
T  47070278 agctcacacaattaattgtagagaagtgggatgttcagggttcgaaccccggtccctgtataaattatgcaatgtcc 47070354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 47194395 - 47194471
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||||||||| |||||||| |||||  || ||| |||||||||||||| |||| |||||||||| |||||    
T  47194395 ctcacacaattaattgtggagaagtggggtgtttgggatttgaaccccgatccctacatatattatacaatatccct 47194471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 7876090 - 7876020
Alignment:
Q  232 aattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||| |||||||| |||||| ||| || |||||| |||||||||||||||||| ||||||||||||    
T  7876090 aattaattgtggagaagtggggtgtctggagtttgaaccc-gatccctgcataaattatgcaatgtccctac 7876020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 1563706 - 1563788
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| ||||||||||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  1563706 gagctcacacaatttaattgtagagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 1563788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 9712157 - 9712247
Alignment:
Q  214 agtagctggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||  ||||||||||||| |||||| |||||||| |||||||||  |||||||||||| ||||||||| | ||| |||| |||||||    
T  9712157 agtagctaaagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctac 9712247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 22548317 - 22548236
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    |||||||||||| ||||||| ||| |||||||| ||||| |||  ||||||||| || ||||| ||||||||| ||||||||    
T  22548317 gctggagctcacgcaattaaatgtggagaagtggggtgttcggggttcgaaccctgacccctgtataaattatgcaatgtcc 22548236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 37411717 - 37411786
Alignment:
Q  234 ttaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||| ||| |||||||| |||||||||| ||| ||| |||| ||||||||||||||| ||||||||||||    
T  37411717 ttaaatgtggagaagtggggtgtccggagttcaaactccgacccctgcataaattatgcaatgtccctac 37411786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 301
Target Start/End: Complemental strand, 22774143 - 22774063
Alignment:
Q  221 ggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||| |||| ||| |||||||| |||||||||  || |||||||   ||||||||||||||| ||||||||||    
T  22774143 ggagctcacacatttaaatgtggagaagtggggtgtccggggtttgaacccctgcccctgcataaattatgcaatgtccct 22774063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 25155642 - 25155579
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaa 286  Q
    ||||||||||||||| ||| |||||||| ||||||| |  |||||||||||| |||||||||||    
T  25155642 agctcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccgaaccctgcataaa 25155579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 301
Target Start/End: Complemental strand, 27788375 - 27788292
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||| ||| |||| ||| |||||||| |||||| ||  |||||||||||  ||||||||||||||| |||| |||||    
T  27788375 gctggagctcatacatttaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattatgcaatatccct 27788292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 301
Target Start/End: Complemental strand, 27791531 - 27791448
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||| ||| |||| ||| |||||||| |||||| ||  |||||||||||  ||||||||||||||| |||| |||||    
T  27791531 gctggagctcatacatttaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattatgcaatatccct 27791448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 28059848 - 28059769
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||| |||| ||| ||||| || ||||| | || |||||||||||  ||||||||||||||| ||||||||||    
T  28059848 gagctcacacatttaaatgtggagaattggggtgttcagagttcgaaccccggcccctgcataaattatgcaatgtccct 28059769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 35683094 - 35683157
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| ||||||||  ||||||||| |||||||||||| |||||||||    
T  35683094 gagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccgacccctgcata 35683157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 303
Target Start/End: Complemental strand, 38151464 - 38151365
Alignment:
Q  204 tttttggtccagtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||| ||| ||| ||| |||||||||||||||| ||| |||||||| ||||| |    |||||||||||| |||||||||||| || |||| |||||||    
T  38151464 tttttagtctagtggctagagctcacacaattaaatgtggagaagtggggtgttcatggttcgaaccccgacccctgcataaataatgcaatatccctac 38151365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 32086114 - 32086200
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccga-tccctgcataaattatacaatgtccctac 303  Q
    ||||||||||| | |||||| ||| ||||| ||| ||||||||| ||||||| ||||  |||||| |||||||||| ||||||||||    
T  32086114 gctggagctcatataattaaatgtggagaaatgtagtgtccggagttcgaactccgaccccctgcctaaattatactatgtccctac 32086200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 4611340 - 4611260
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||||| |||||||| |||||| |   ||||||||||   |||| |||||||||| ||||||||||||    
T  4611340 gagctcacacaattaattgtggagaagtg-ggtgtctgtggttcgaaccccagcccctacataaattatgcaatgtccctac 4611260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 299
Target Start/End: Complemental strand, 4886936 - 4886864
Alignment:
Q  226 tcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    |||||||||||  ||| |||||||| |||||||||| |||||||||||| || |||||||||||| | ||||||    
T  4886936 tcacacaattatatgtggagaagtggggtgtccgga-ttcgaaccccgacccttgcataaattatgccatgtcc 4886864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 302
Target Start/End: Original strand, 7778967 - 7779044
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    ||||||||||||| ||| ||||||||  ||||||||  ||||||| |||   | ||||||||||||||||||||||||    
T  7778967 ctcacacaattaaatgtggagaagtggagtgtccggggttcgaactccggcacttgcataaattatacaatgtcccta 7779044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 15074870 - 15074950
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    ||||||||| |||| |||||| |||||||| ||||||||| |||||||||||| |||||||||| | ||| |||| ||||||    
T  15074870 gagctcacataatttaattgtggagaagtg-ggtgtccgggattcgaaccccggtccctgcatataatatgcaatatcccta 15074950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 35499639 - 35499558
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| |||| ||||||| ||| |||||| ||| ||| || | | ||||||||| ||| ||||||||||||    
T  35499639 gagctcacacaattaaatgtaaagaagtggggtatccggagttcaaactccaaccactgcataaactatgcaatgtccctac 35499558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 41854109 - 41854020
Alignment:
Q  212 ccagtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||| ||| ||||||||| |||||| ||| |||||| | |||||||||  || |||| |||  ||||||||||||||| ||||||||||    
T  41854109 ccagtggctagagctcacataattaaatgtggagaagcggggtgtccggggtttgaactccgtcccctgcataaattatgcaatgtccct 41854020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 47542945 - 47543025
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||| |||||| | | |||||||| ||||||||| |||||||||| |  ||||||||||||||| ||||| ||||||    
T  47542945 gagctcacaaaattaaatatggagaagtg-ggtgtccgggattcgaaccctggcccctgcataaattatgcaatgcccctac 47543025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 303
Target Start/End: Original strand, 36391861 - 36391953
Alignment:
Q  212 ccagtagctggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||| ||| |||||||||||||| |||||| ||||||||  ||||||||  ||||||||||||  |||||||| | ||| |||| |||||||    
T  36391861 ccagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctac 36391953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 7525547 - 7525484
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| |||||||   |||||||||||||||||| ||| |||||||||    
T  7525547 gagctcacacaatttaattgtggagaagtagagtgtccggaattcgaacctcgacccctgcata 7525484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 303
Target Start/End: Original strand, 9877237 - 9877316
Alignment:
Q  225 ctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||| |||||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  9877237 ctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 9877316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 12935842 - 12935763
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||| ||| |||||||| || ||| ||  ||||||||||   |||| |||||||||| ||||||||||    
T  12935842 gagctcacacaattaaatgtggagaagtggggcgtctggggttcgaaccccatcccctacataaattatgcaatgtccct 12935763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 303
Target Start/End: Original strand, 23102528 - 23102607
Alignment:
Q  225 ctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||| |||||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  23102528 ctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 23102607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 32047192 - 32047129
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||  |||||||||    
T  32047192 gagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcata 32047129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 35815941 - 35815878
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| ||||||||  ||||| || ||||||||||||| |||||||||    
T  35815941 gagctcacacaatttaattgtggagaagtggagtgtctgggattcgaaccccgacccctgcata 35815878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 46758349 - 46758282
Alignment:
Q  218 gctggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||||||| || || ||| ||| |||| |||||||||| |||||||||||| |||||||||    
T  46758349 gctggagctcacacattttaaatgtggaggagtggggtgtccggagttcgaaccccgacccctgcata 46758282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 12771673 - 12771723
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaacccc 272  Q
    |||||||||||||||| | ||||||| || |||||||||| ||||||||||    
T  12771673 gagctcacacaattaaatatagagaactgaggtgtccggagttcgaacccc 12771723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 35950231 - 35950149
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  ||||||||  ||||||||||||  |||||||| | ||| |||| |||||||    
T  35950231 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctac 35950149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 42443792 - 42443710
Alignment:
Q  222 gagctcacacaa-ttaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||| |||||||| ||||||||  |||||||| ||||||||||||   |||||||| | ||| |||| |||||||    
T  42443792 gagctcacacaacttaattgtggagaagtggagtgtccgggattcgaaccccggctcctgcatataatatgcaatatccctac 42443710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 43119399 - 43119461
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcat 283  Q
    |||||||||||||| |||||| |||||||| ||||||| |  |||||||||||| ||||||||    
T  43119399 gagctcacacaatttaattgtggagaagtggggtgtccagggttcgaaccccgacccctgcat 43119461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 1398872 - 1398933
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||  ||| ||| |||||||| ||||||||| ||||||||||||  |||||||||    
T  1398872 agctcacacatataaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcata 1398933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 9498056 - 9497987
Alignment:
Q  234 ttaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||| |||||||| |||||||||  |||||||||||| |||| |||| | ||| |||| |||||||    
T  9498056 ttaattgtggagaagtggggtgtccggggttcgaaccccgacccctacatataatatgcaatatccctac 9497987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 15021179 - 15021260
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||| |||| ||| || || || |||||||||  ||||||||||||  |||| ||||||||| |||| |||||||    
T  15021179 gagctcacacatttaaatgtggaaaaatgaggtgtccggggttcgaaccccgactcctgtataaattatgcaatctccctac 15021260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 24188571 - 24188510
Alignment:
Q  224 gctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||| |||||| |||||||| |||||| ||  |||||||||||| |||||||||    
T  24188571 gctcacacaatttaattgtggagaagtggggtgtctggggttcgaaccccgacccctgcata 24188510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 27425190 - 27425109
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||| ||||| |||  ||||||  |||||||||  |||||||| |   ||||||||||||||| ||||||||||||    
T  27425190 gagctcacacgattaaatgtgaagaagtcgggtgtccggggttcgaaccactgcccctgcataaattatgcaatgtccctac 27425109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 32750118 - 32750041
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    |||||||||||||||||| | ||||||||  ||||| |  |||||||||||   || |||||||||||| ||||||||    
T  32750118 gagctcacacaattaattatggagaagtggagtgtctgagattcgaacccctgcccgtgcataaattatgcaatgtcc 32750041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 43633057 - 43633138
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||||||||||| |||||| ||||||||  |||||||| ||||||||||||   |||||||| | |||| ||| ||||||    
T  43633057 gagctcacacaatttaattgtggagaagtggagtgtccgggattcgaaccccggctcctgcatataatatataatatcccta 43633138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 47438036 - 47437955
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||| |||| ||| ||||||||  ||||||||  || |||||||   ||||||||||||||| |||||| |||||    
T  47438036 gagctcacacagttaaatgtggagaagtggagtgtccggggtttgaacccctgcccctgcataaattatgcaatgttcctac 47437955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 47440773 - 47440846
Alignment:
Q  218 gctggagctcacaca-attaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattat 290  Q
    ||||||||||||||| ||| | ||| |||||||| ||||||| |  |||||||||||| ||||||||| |||||    
T  47440773 gctggagctcacacatatttaatgtggagaagtggggtgtccagggttcgaaccccgacccctgcatatattat 47440846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 10244856 - 10244908
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccg 273  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||    
T  10244856 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccg 10244908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 24822757 - 24822840
Alignment:
Q  201 ttatttttggtccagtag-ctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||| ||||| || ||||||||| | |||||||| |||| |||  ||||||||  |||||||||||| |||||||||    
T  24822757 ttatttttggtcaagtaggctagagctcaca-atttaattgtggagacgtggagtgtccggcgttcgaaccccgacccctgcata 24822840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 4227712 - 4227793
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||| | |||||||| |||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  4227712 gagctcacacaattaattatggagaagtggggtgtccggagttcgaaccccgacccctgcataaattatgcaatgtccctac 4227793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 301
Target Start/End: Original strand, 19222548 - 19222633
Alignment:
Q  216 tagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||| ||||||||||||||||| ||| |||||||| |||||||||  |||||||||||  ||||||||||||||| ||||||||||    
T  19222548 tagccggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccct 19222633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 32401596 - 32401512
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||||| ||| |||| ||| |||||||||  ||||||||| || ||||||||||||||||||||||||||||    
T  32401596 gctggagctcacacaattaaatgtggagatgtggggtgtccggggttcgaaccc-gacccctgcataaattatacaatgtccctac 32401512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 24303492 - 24303413
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||| ||| |||||||| |||||||||  |||||||||||  ||||||||||||||| ||||||||||    
T  24303492 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccct 24303413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 301
Target Start/End: Original strand, 46844931 - 46845018
Alignment:
Q  214 agtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||||||||||| |||| ||| |||||||  |||||||||  ||||||| |||| ||||||||||||||| ||||||||||    
T  46844931 agtagctggagctcacacatttaaatgtggagaagtagggtgtccggggttcgaactccgacccctgcataaattatgcaatgtccct 46845018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 49983682 - 49983757
Alignment:
Q  228 acacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||||  |||||||||  |||||||||| | ||||||||||||||||||||||||||||    
T  49983682 acacaattaattgtggagaagtagggtgtccggggttcgaaccccaacccctgcataaattatacaatgtccctac 49983757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 38949780 - 38949695
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| ||||| ||| |||||||| ||||| |||  |||||||||||  ||||||||||||||| ||||||||||||    
T  38949780 gctggagctcacactattaaatgtggagaagtggggtgttcggggttcgaaccccggcccctgcataaattatgcaatgtccctac 38949695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 301
Target Start/End: Complemental strand, 43280176 - 43280091
Alignment:
Q  216 tagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||| || |||||||| |||| ||| |||||||| ||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  43280176 tagctagaactcacacatttaaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcataaattatgcaatgtccct 43280091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 302
Target Start/End: Complemental strand, 47098622 - 47098538
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    ||||||||||||| |||||| ||| |||||||| |||||| ||  |||||||| ||  |||||||||||||||||||||||||||    
T  47098622 gctggagctcacataattaaatgtggagaagtgaggtgtctggggttcgaacctcggcccctgcataaattatacaatgtcccta 47098538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 32776314 - 32776232
Alignment:
Q  222 gagctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| |||  |||||||| |||||||||  |||||||||||  ||||||||||||||| ||||||||||||    
T  32776314 gagctcacacaattaaattggggagaagtgaggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctac 32776232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 26880279 - 26880202
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    ||||||||||| |||| ||| |||||||| |||||| | | |||||||||||| ||||||||||||||| ||||||||    
T  26880279 gagctcacacatttaaatgtggagaagtggggtgtctgaagttcgaaccccgacccctgcataaattatgcaatgtcc 26880202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 303
Target Start/End: Original strand, 7253490 - 7253569
Alignment:
Q  224 gctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| ||  |||||||| |||||||||  || |||||  |||||||||||||||||| ||||||||||||    
T  7253490 gctcacacaattaaatgcggagaagtggggtgtccggggtttgaaccttgatccctgcataaattatgcaatgtccctac 7253569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 48546276 - 48546213
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||| ||||    
T  48546276 gagctcacacaatttaattgtagagaagtgaggtgtccggggttcgaaccccgatccctacata 48546213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 49443391 - 49443470
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||| |||| ||| |||||||| |||||||||  ||||||| |||  ||||||||||||||| ||||||||||    
T  49443391 gagctcacacatttaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccct 49443470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 5173978 - 5174059
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| ||| |||||||| ||||| |||  ||||||||||   ||||||||||||||| ||||||| ||||    
T  5173978 gagctcacacaattaaatgtggagaagtggggtgttcggggttcgaacccctgcccctgcataaattatgcaatgtctctac 5174059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 303
Target Start/End: Original strand, 48515357 - 48515434
Alignment:
Q  226 tcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||| |||| ||| ||||||||||||||||||  |||||||| ||| |||||||||||||||  ||| |||||||    
T  48515357 tcacacatttaaatgtggagaagtgtggtgtccggggttcgaacctcgacccctgcataaattatggaatatccctac 48515434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 15006044 - 15005968
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtgg-tgtccggaattcgaaccccgatccctgcataaattatacaatgt 297  Q
    |||||||| ||||||| ||| ||||||||||| |||||||| |||||||||||   |||||||||||||| ||||||    
T  15006044 gagctcactcaattaaatgtggagaagtgtggatgtccggagttcgaaccccggctcctgcataaattatgcaatgt 15005968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 27837367 - 27837292
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtc 298  Q
    ||||||||||| |||| |||| |||| || | |||||||| |||||||||| | |||||||||||||||||||||||    
T  27837367 gagctcacacatttaaatgta-agaaatgggatgtccggagttcgaaccccaacccctgcataaattatacaatgtc 27837292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 298
Target Start/End: Complemental strand, 35849587 - 35849507
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtc 298  Q
    |||||||||||||||||||| ||  |||||||| |||||  ||  |||||||||||  ||||||||||||||| |||||||    
T  35849587 gctggagctcacacaattaaatggggagaagtggggtgtttggggttcgaaccccggcccctgcataaattatgcaatgtc 35849507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 301
Target Start/End: Complemental strand, 9685102 - 9685019
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||||||| |||| | | ||||||||  |||| ||| |||||||||||   ||||||||||||||| ||||||||||    
T  9685102 gctggagctcacacatttaaatatggagaagtggagtgttcgggattcgaaccccagcccctgcataaattatgcaatgtccct 9685019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 54408518 - 54408597
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||| |||||| ||| || || || |||||||||  |||||||||||| | ||||||||||||| ||||||||||    
T  54408518 gagctcacataattaaatgtggaaaaatggggtgtccggggttcgaaccccgacctctgcataaattatgcaatgtccct 54408597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 3748569 - 3748651
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||| | |||||||  |||||||||| | ||||||||| | |||||||| |||||||    
T  3748569 gagctcacacaattaaattgtggagaagtgagatgtccggggttcgaaccccaacccctgcatataatatacaatatccctac 3748651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 36729559 - 36729469
Alignment:
Q  214 agtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctact 304  Q
    |||||||| |||||||| |||||| | | |||||||| ||||||| || || ||||  ||||| ||| |||||||||||||| ||||||||    
T  36729559 agtagctgaagctcacataattaaatatggagaagtgaggtgtccagagtttgaacttcgatctctgtataaattatacaatatccctact 36729469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 39720038 - 39719956
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  39720038 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 39719956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 295
Target Start/End: Original strand, 41411598 - 41411668
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaat 295  Q
    ||||||||||||| ||| |||||| | |||||||||  || ||||||||| ||||||||||||||| ||||    
T  41411598 ctcacacaattaaatgtggagaagcggggtgtccggggtttgaaccccgaaccctgcataaattatgcaat 41411668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 41936374 - 41936456
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  41936374 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 41936456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 44764822 - 44764743
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| ||| ||||||||  ||||||||  |||||||||    ||||||||||||||| ||||||||||||    
T  44764822 gagctcacacaattaaatgtggagaagtggagtgtccggggttcgaaccc--gcccctgcataaattatgcaatgtccctac 44764743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 52984113 - 52984031
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||||||||||||  ||||||||  |||||||||||| || |||||| | ||| |||| |||||||    
T  52984113 gagctcacacaatttaattgtagagaagtggagtgtccggggttcgaaccccgacccttgcatacaatatgcaatatccctac 52984031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 53432704 - 53432786
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  53432704 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 53432786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 18764836 - 18764912
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    ||||||||||| |||| |||||||||||| ||||||| |  ||||||||| || | ||||||||||||| ||||||||    
T  18764836 gagctcacacatttaaatgtagagaagtg-ggtgtccagtgttcgaaccctgaccactgcataaattatgcaatgtcc 18764912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 25883951 - 25884024
Alignment:
Q  218 gctggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattat 290  Q
    ||||||||||||||| || || ||| |||||||| |||||||||  |||||||||||| ||||||||| |||||    
T  25883951 gctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatatattat 25884024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 49284932 - 49284851
Alignment:
Q  214 agtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaat 295  Q
    |||||||| ||||||||||||||| ||| |||||||| ||| ||| |  ||||||| ||  |||||||||||||||| ||||    
T  49284932 agtagctgaagctcacacaattaaatgtggagaagtggggtttccagggttcgaactcccgtccctgcataaattatgcaat 49284851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 49577471 - 49577390
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| | | |||||||| |||||| ||  ||  |||||||| | ||||||||||||| ||||||||||||    
T  49577471 gagctcacacaattaaatatggagaagtggggtgtctggggtttaaaccccgaccgctgcataaattatgcaatgtccctac 49577390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 8125740 - 8125660
Alignment:
Q  224 gctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| || | |||||||   ||||||||||||||||||||| |||||||||| | ||| |||| |||||||    
T  8125740 gctcacacaattaaattttggagaagtagagtgtccggaattcgaaccccggtccctgcatataatatgcaatatccctac 8125660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 48722347 - 48722267
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||| |||||||||||| |  |||||||||  |||||||||||| ||||||||| | ||| |||| |||||    
T  48722347 gagctcacacaatttaattgtagagaaatagggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccct 48722267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 303
Target Start/End: Original strand, 30779537 - 30779616
Alignment:
Q  225 ctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||| |||| |||||||| ||||||| |  |||||||||||| ||||||||| | ||| |||| |||||||    
T  30779537 ctcacacaattaaattgtggagaagtggggtgtccagggttcgaaccccgacccctgcatataatatgcaatatccctac 30779616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 32256521 - 32256584
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||  |||||||||    
T  32256521 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcata 32256584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 45647383 - 45647324
Alignment:
Q  244 agaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||| |||||||||  |||||||||||  |||||||||  |||||||||||||||||    
T  45647383 agaagtgaggtgtccggggttcgaaccccgccccctgcatattttatacaatgtccctac 45647324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 303
Target Start/End: Complemental strand, 48443202 - 48443140
Alignment:
Q  243 gagaagtgtggtgtccggaattcga--accccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||| ||||| ||||||||||  ||||||| ||||||||||||||| |||||| |||||    
T  48443202 gagaagtggggtgttcggaattcgagaaccccgacccctgcataaattatgcaatgttcctac 48443140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 13644667 - 13644749
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||| || |||||||  |||| | || |||||||||||| ||||||||| | |||||||| |||||||    
T  13644667 gagctcacacaatttaattatatagaagtggagtgtactgagttcgaaccccgacccctgcatataatatacaatatccctac 13644749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 15299175 - 15299093
Alignment:
Q  222 gagctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| |||||||||||||  ||||||| | ||||||| ||||   ||||||| | |||||||| |||||||    
T  15299175 gagctcacacaattaaattgtagagaagtggagtgtccgaagttcgaactccgactgctgcatataatatacaatatccctac 15299093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 28689639 - 28689721
Alignment:
Q  222 gagctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| |||| ||||||||  ||||||||  ||||||||||||  |||||||| | ||| |||| |||||||    
T  28689639 gagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctac 28689721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 32732505 - 32732567
Alignment:
Q  223 agctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||||| |||| | ||||||||  ||||||||| |||||||||||| |||||||||    
T  32732505 agctcacacaatttaattatggagaagtggagtgtccggagttcgaaccccgacccctgcata 32732567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 34102578 - 34102660
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||| || |||||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  34102578 gagctcacacagtttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 34102660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 40192255 - 40192177
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||| ||| ||||||||  |||||||| |||||||| |||| | ||||||| | ||| |||| |||||||    
T  40192255 ctcacacaattaaatgtggagaagtggagtgtccgggattcgaacaccgacctctgcatataatatgcaatatccctac 40192177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 41710690 - 41710624
Alignment:
Q  218 gctggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcat 283  Q
    ||||||||||||||| || || ||| |||||||| ||||||||| ||||||||||||  ||||||||    
T  41710690 gctggagctcacacattttaaatgtggagaagtgaggtgtccgggattcgaaccccggcccctgcat 41710624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 11995230 - 11995153
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    ||||||||||||| ||| ||||| || |||||||||| || ||||| ||  | || |||||||||| |||||||||||    
T  11995230 ctcacacaattaaatgtggagaaatgaggtgtccggagtttgaacctcggcctctacataaattatgcaatgtcccta 11995153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 40228403 - 40228362
Alignment:
Q  262 attcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| || ||||||||| ||||||||||||    
T  40228403 attcgaaccccgatccgtgtataaattatgcaatgtccctac 40228362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 52992027 - 52992108
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| | | |||||||| ||||||  |  |||||| ||||| || |||||||||||| |||| |||||||    
T  52992027 gagctcacacaattaaatatggagaagtggggtgtcgagggttcgaatcccgacccttgcataaattatgcaatatccctac 52992108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 3614069 - 3614129
Alignment:
Q  243 gagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||| |||||| ||  ||||||||||   ||||||||||||||| ||||||||||||    
T  3614069 gagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccctac 3614129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 3894647 - 3894595
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccg 273  Q
    |||||||||||||| |||||| ||||||||  ||||||||| |||||||||||    
T  3894647 gagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccg 3894595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 22472281 - 22472333
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccg 273  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||    
T  22472281 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccg 22472333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 29531316 - 29531241
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggt-gtccggaattcgaaccccgatccctgcataaattatacaatgt 297  Q
    |||||||||||||||| ||| |||||||| ||| ||||||  | |||||||||| |||| |||||||||| ||||||    
T  29531316 gagctcacacaattaaatgtggagaagtgaggttgtccggggt-cgaaccccgaccccttcataaattatgcaatgt 29531241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 303
Target Start/End: Original strand, 52974010 - 52974102
Alignment:
Q  212 ccagtagctggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||| ||| |||||||||||||| |||||| ||||||||  ||||||||  |||||||||||   |||||||| | ||| |||| |||||||    
T  52974010 ccagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctac 52974102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 29406461 - 29406378
Alignment:
Q  220 tggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||| ||| |||||||| | |||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  29406461 tggagctcacacaattaaatgtggagaagtgggttgtccggagttcgaaccccgacccctgcataaattatgcaatgtccctac 29406378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 23132771 - 23132853
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||||||| |||| | | |||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  23132771 gctggagctcacacatttaaatatggagaagtg-ggtgtccggagttcgaaccccgatccctgcataaattatgcaatgtccct 23132853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 303
Target Start/End: Original strand, 45139853 - 45139930
Alignment:
Q  226 tcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||| ||| |||||||| |||||||||  |||||||||||  ||||||||||||||||||||||||||||    
T  45139853 tcacacaattaaatgtggagaagtgaggtgtccggggttcgaaccccggcccctgcataaattatacaatgtccctac 45139930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 2629681 - 2629602
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||| ||| |||||||| ||||| |||  |||||||||||| ||||||||||||||| ||||||||||    
T  2629681 gagctcacacaattaaatgtggagaagtggggtgttcggggttcgaaccccgacccctgcataaattatgcaatgtccct 2629602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 51890899 - 51890820
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||| ||| |||||||| |||||||||  |||||||||||  ||||||||||||||| ||||||||||    
T  51890899 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccct 51890820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 28465742 - 28465822
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||||||||||||||||| |||||||| |||||| ||| |||||||||||| ||||  || |||||| |||||||||||    
T  28465742 gagctcacacaattaattgtggagaagtgaggtgtctggagttcgaaccccgacccctagattaattatgcaatgtcccta 28465822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 3785017 - 3784933
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||||| |||| ||| |||||||||||||| |||  ||||||||| || ||||||||||||||| |||| |||||||    
T  3785017 gctggagctcacacatttaaatgtggagaagtgtggtgttcggggttcgaaccctga-ccctgcataaattatgcaatatccctac 3784933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 23924840 - 23924921
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||| ||| ||| ||||||||  ||||||||  |||||||||||  ||||||||||||||| ||||||||||||    
T  23924840 gagctcacacaaataaatgtggagaagtgaagtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctac 23924921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 40809149 - 40809230
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||| |||||||||| |||||||| | |||||||  ||| ||| |||||| |||||||||||||||||| |||||||    
T  40809149 gagctcacataattaattgtggagaagtgggatgtccggggttcaaactccgatctctgcataaattatacaatatccctac 40809230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 11294806 - 11294885
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||| ||| |||| ||| |||||||| |||||||||  |||||||||||  ||||||||||||||| ||||||||||    
T  11294806 gagctcaaacatttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccct 11294885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 31852451 - 31852372
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||| | | |||||||| |||||||||  |||||||| ||  || |||||||||||||||||||||||    
T  31852451 gagctcacacaattaaatatggagaagtggggtgtccggggttcgaacctcggcccttgcataaattatacaatgtccct 31852372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 8965197 - 8965115
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| ||||||||||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  8965197 gagctcacacaatttaattgtagagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 8965115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 13578424 - 13578514
Alignment:
Q  214 agtagctggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||  ||||||||||||| |||||| |||||||| |||||||||  |||||||||||| ||||||||| | ||| |||| |||||||    
T  13578424 agtagctaaagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctac 13578514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 288
Target Start/End: Original strand, 38848088 - 38848154
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaatt 288  Q
    ||||||||||| |||| ||| |||||||| |||||||||  |||||||||||| |||||||||||||    
T  38848088 gagctcacacatttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcataaatt 38848154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 43905812 - 43905750
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||||||||  || |||||||| |||||||||  ||||||||||||||||||||||    
T  43905812 gagctcacacaattaaacgtggagaagtggggtgtccggggttcgaaccccgatccctgcata 43905750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 51777946 - 51777884
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||| |||| ||| |||||||| | |||||||| ||||||||||||||||||||||    
T  51777946 gagctcacacatttaaatgtggagaagtgggatgtccggagttcgaaccccgatccctgcata 51777884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 299
Target Start/End: Complemental strand, 12625927 - 12625854
Alignment:
Q  226 tcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    |||||||||||| ||| |||||||| |||||||||  ||||||| |||| ||||||||||||||| ||| ||||    
T  12625927 tcacacaattaaatgtggagaagtggggtgtccggtgttcgaactccgacccctgcataaattatgcaacgtcc 12625854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 13089009 - 13088936
Alignment:
Q  224 gctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgt 297  Q
    |||||||||||| | ||| || ||||| ||||||||  ||||||||||||| ||||||||||||||| ||||||    
T  13089009 gctcacacaatttaatgtggaaaagtggggtgtccgagattcgaaccccgacccctgcataaattatgcaatgt 13088936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 42664083 - 42664006
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    |||||||||||||||| ||| |||||||| ||||||| | ||||||||||| | | |||| |||||||| ||||||||    
T  42664083 gagctcacacaattaaatgtggagaagtggggtgtccaggattcgaaccccaacctctgcgtaaattatgcaatgtcc 42664006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 298
Target Start/End: Original strand, 43627221 - 43627305
Alignment:
Q  214 agtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtc 298  Q
    ||||||| |||||||||||||||| | | ||||||||  |||||| |  || ||||||||| ||||||||||||||| |||||||    
T  43627221 agtagctagagctcacacaattaaatatggagaagtggagtgtccagggtttgaaccccgacccctgcataaattatgcaatgtc 43627305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 46791172 - 46791251
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatc-cctgcataaattatacaatgt 297  Q
    |||| |||||||| |||||| |||  ||||||| |||||||||| |||||||||| ||| |||||||||||||||||||||    
T  46791172 gctgaagctcacagaattaaatgtgaagaagtggggtgtccggagttcgaacccc-atctcctgcataaattatacaatgt 46791251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 49264628 - 49264552
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtc 298  Q
    |||||||||||||||| ||| |||||||| |||||||||  |||||||| ||  |||||||||| |||| |||||||    
T  49264628 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcggcccctgcataagttatgcaatgtc 49264552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 304
Target Start/End: Original strand, 42134424 - 42134507
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctact 304  Q
    ||||||||| |||| |||||| |||||||| |||||||||| |||||||||||| || |||||| | ||| |||| ||||||||    
T  42134424 gagctcacataatttaattgtggagaagtggggtgtccggagttcgaaccccgacccttgcatataatatgcaatatccctact 42134507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 55056020 - 55055937
Alignment:
Q  220 tggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||| ||| ||||||||  ||||||||  |||||||| ||  ||||||||||| ||| || |||||||||    
T  55056020 tggagctcacacaattaaatgtggagaagtggcgtgtccggggttcgaacctcggcccctgcataaaatatgcattgtccctac 55055937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 26250718 - 26250668
Alignment:
Q  253 gtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||| ||||||||||||  ||||||||||||||| ||||||||||||    
T  26250718 gtgtccgggattcgaaccccggcccctgcataaattatgcaatgtccctac 26250668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 284
Target Start/End: Complemental strand, 32760740 - 32760682
Alignment:
Q  226 tcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||||| ||||| || |||||||||| |||||||||| | |||||||||    
T  32760740 tcacacaattaattgtggagaaatggggtgtccggagttcgaaccccaacccctgcata 32760682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 21935579 - 21935498
Alignment:
Q  223 agctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||| |||||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  21935579 agctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 21935498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 27091441 - 27091521
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||   | ||||||| | |||||||  ||||||| |||| ||||||| ||||||||||||||||||||    
T  27091441 gagctcacacaattaatatga-agaagtgggatgtccggggttcgaactccgacccctgcagaaattatacaatgtccctac 27091521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 42395329 - 42395248
Alignment:
Q  223 agctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||| |||||| |||||||| |||||||||| |||||||||||  |||| |||| | ||| |||| |||||||    
T  42395329 agctcacacaatttaattgtggagaagtggggtgtccggagttcgaaccccggcccctacatataatatgcaatatccctac 42395248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 22530161 - 22530201
Alignment:
Q  263 ttcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  22530161 ttcgaaccccgatctctgcataaattatacaatgtctctac 22530201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 56087924 - 56087984
Alignment:
Q  225 ctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||| |||||| |||||||| ||||||||| ||||||||||||  |||||||||    
T  56087924 ctcacacaatttaattgtggagaagtggggtgtccgggattcgaaccccggcccctgcata 56087984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 2222642 - 2222579
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||  |||||||||    
T  2222642 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcata 2222579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 12922048 - 12921997
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccg 273  Q
    |||||||||||||||||||||||||| ||  |||| |||| |||||||||||    
T  12922048 gagctcacacaattaattgtagagaaatggagtgttcggagttcgaaccccg 12921997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 25224552 - 25224493
Alignment:
Q  244 agaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||| ||||||||   ||||||| |||| ||||||||||||||| ||||||||||||    
T  25224552 agaagtggggtgtccgaggttcgaactccgacccctgcataaattatgcaatgtccctac 25224493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 40486543 - 40486464
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||| |||| |||  |||||||  ||||||||  |||||||||||  ||||||||||||||| |||| |||||    
T  40486543 gagctcacacatttaaatgtgaagaagtggagtgtccggggttcgaaccccggcccctgcataaattatgcaatatccct 40486464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 55021657 - 55021594
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| ||||||||  ||||||||  |||||||||||| |||||||||    
T  55021657 gagctcacacaatttaattgtggagaagtgaagtgtccggggttcgaaccccgacccctgcata 55021594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 4700905 - 4700987
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||| | |||||||  |||| || |||| ||||||||| | |||||||| |||||||    
T  4700905 gagctcacacaattaaattgtggagaagtgggatgtccggggttcggacaccgacccctgcatataatatacaatatccctac 4700987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 8282466 - 8282416
Alignment:
Q  200 tttatttttggtccagtagctggagctcacacaattaattgtagagaagtg 250  Q
    ||||||||| ||| |||||||| | ||||||||||||||||||||| ||||    
T  8282466 tttattttttgtcaagtagctgaaactcacacaattaattgtagaggagtg 8282416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 302
Target Start/End: Original strand, 11375851 - 11375937
Alignment:
Q  217 agctggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||| ||||||||||| || |||||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| ||||||    
T  11375851 agctagagctcacacattttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatataatatgcaatatcccta 11375937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 12775207 - 12775269
Alignment:
Q  223 agctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||||| |||||| ||||||||  |||||| |||||||||||| || |||||||||    
T  12775207 agctcacacaatttaattgtggagaagtggagtgtccagaattcgaaccctgacccctgcata 12775269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 13264241 - 13264323
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| ||||||  ||||||| |||||||||  ||||||||||| ||| |||||| | ||| |||| |||||||    
T  13264241 gagctcacacaatttaattgtgaagaagtggggtgtccggggttcgaaccccggtccttgcatataatatgcaatatccctac 13264323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 19963885 - 19963803
Alignment:
Q  222 gagctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| ||| |||||||||  |||||||   |||||||||||| ||||||||| | ||| |||| |||||||    
T  19963885 gagctcacacaattaaattgcagagaagtgaagtgtccgaggttcgaaccccgacccctgcatataatatgcaatatccctac 19963803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 27103068 - 27103150
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  ||||||||||||||||| |||| | || |||| | ||| |||| |||||||    
T  27103068 gagctcacacaatttaattgtggagaagtggagtgtccggaattcgaactccgacctctacatataatatgcaatatccctac 27103150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 304
Target Start/End: Original strand, 32287485 - 32287590
Alignment:
Q  198 tatttatttttggtccagtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgt 297  Q
    ||||||||||||||| | | ||| ||| |||||||||||| | | |||||||| |||||  ||  ||| ||| || | ||||||||||||||| ||||||    
T  32287485 tatttatttttggtctaat-gctagagatcacacaattaaatatggagaagtggggtgtttggggttcaaactccaacccctgcataaattatgcaatgt 32287583  T
Q  298 ccctact 304  Q
    |||||||    
T  32287584 ccctact 32287590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 37935964 - 37935882
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||| ||||| ||| ||||||||||   ||||||||| | ||| |||| |||||||    
T  37935964 gagctcacacaattaaattgtggagaagtgttgtgtctggagttcgaaccccagcccctgcatataatatgcaatatccctac 37935882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 44195605 - 44195654
Alignment:
Q  234 ttaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||| ||||||||  |||||||||||||||||||||| |||||||||    
T  44195605 ttaattgtggagaagtgaagtgtccggaattcgaaccccga-ccctgcata 44195654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 44568187 - 44568249
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||||| | | |||||||| ||||||  || |||||||||||| |||||||||    
T  44568187 gagctcacacaattaaatatggagaagtgaggtgtctcgagttcgaaccccgacccctgcata 44568249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 49056878 - 49056796
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||| |||||||||  ||||||| |||   |||||||| | ||| ||||||||||||    
T  49056878 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaactccggctcctgcatataatatgcaatgtccctac 49056796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 49901585 - 49901503
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||| | |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  49901585 gagctcacacaatttaattgtggagaagcggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 49901503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 32293210 - 32293133
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    ||||||||| |||||| ||| ||||||||   ||||| |  ||| |||||||| ||||||||||||||| ||||||||    
T  32293210 gagctcacataattaaatgtggagaagtggaatgtccagggttctaaccccgacccctgcataaattatgcaatgtcc 32293133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 33933707 - 33933788
Alignment:
Q  223 agctcacaca-attaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||| ||||| ||| |||||||| ||||||| |   ||||||||||  ||||||||| ||||| ||||||||||||    
T  33933707 agctcacacatattaaatgtggagaagtggggtgtccaggggtcgaaccccggcccctgcatatattatgcaatgtccctac 33933788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 39697830 - 39697910
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||||||||||| ||||||  ||||||| ||||| || |||||||||||||| ||||||||| | ||| |||| ||||||    
T  39697830 gagctcacacaatttaattgtgaagaagtggggtgttcg-aattcgaaccccgacccctgcatataatatgcaatatcccta 39697910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 42002408 - 42002327
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| ||| |||||||| |||||| |   ||| |||| ||  |||| |||||||||| ||||||||||||    
T  42002408 gagctcacacaattaaatgtggagaagtggggtgtctgaggttcaaaccacggcccctacataaattatgcaatgtccctac 42002327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 5326592 - 5326512
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||  || ||||| || |||||| ||| ||| ||||||   | || |||||||||||||||||||||||    
T  5326592 agctcacacaattaaaggtggagaaatggggtgtctggatttcaaaccccagcctctacataaattatacaatgtccctac 5326512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 13734969 - 13735009
Alignment:
Q  262 attcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    ||||||||||| | ||||||||||||||| |||||||||||    
T  13734969 attcgaaccccaacccctgcataaattatgcaatgtcccta 13735009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 29505702 - 29505754
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccg 273  Q
    |||||||||||||| |||||| ||||||||  |||||||| ||||||||||||    
T  29505702 gagctcacacaatttaattgtcgagaagtggagtgtccgggattcgaaccccg 29505754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 32189970 - 32190051
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||||||||||||| ||||| |||||||||  |||||||||||  ||||||||||||||| ||||||||||||    
T  32189970 gagctcacacaattaattgtagaaaagtgaggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctac 32190051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 298
Target Start/End: Complemental strand, 3596356 - 3596276
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtc 298  Q
    |||||||||||||||||||| ||| |||||||| |||||||||  |||||||||||| ||||||||||||||| |||||||    
T  3596356 gctggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcataaattatgcaatgtc 3596276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 303
Target Start/End: Complemental strand, 14664103 - 14664005
Alignment:
Q  204 tttttggtccagtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||| ||| ||||||| |||||||||||||||||||| |||||||| |||||||||  || |||| | |  ||||||||||||||| ||||||||||||    
T  14664103 ttttttgtctagtagctagagctcacacaattaattgtggagaagtg-ggtgtccggggtttgaactctggcccctgcataaattatgcaatgtccctac 14664005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 44666311 - 44666390
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||||||| ||||||||   |||||||  |||||||||||||||||||||| ||||| |||| |||||    
T  44666311 gagctcacacaattaattgtggagaagtggaatgtccggggttcgaaccccgatccctgcatatattatgcaatatccct 44666390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 306
Target Start/End: Original strand, 45523399 - 45523478
Alignment:
Q  227 cacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctactga 306  Q
    |||||||||||||||  |||||||  ||||| ||  ||||||||||||||||| ||||||||||||||| ||||||||||    
T  45523399 cacacaattaattgtgcagaagtggtgtgtctggggttcgaaccccgatccctacataaattatacaatatccctactga 45523478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 20919712 - 20919631
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||| |||||| ||| |||||||| |||||||||  |||||||||||  ||| ||||||||||| ||||||||||||    
T  20919712 gagctcacataattaaatgtggagaagtggggtgtccggggttcgaaccccggccccagcataaattatgcaatgtccctac 20919631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 23919441 - 23919526
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||| |||||||||||| ||| ||||| || |||||| || ||||||||||||| |||| |||| ||||| ||||||||||||    
T  23919441 gctggagttcacacaattaaatgtggagaaatggggtgtctgggattcgaaccccgacccctccatatattatgcaatgtccctac 23919526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 13242696 - 13242772
Alignment:
Q  219 ctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaat 295  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||   |||||||||||| ||||||||||||||| ||||    
T  13242696 ctggatctcacacaattaaatgtggagaagtgaggtgtccgaggttcgaaccccgacccctgcataaattatgcaat 13242772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 1964454 - 1964376
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||||||| | | |||||||| |||||||||  || ||||||||  ||||||||||||||| ||||||||||    
T  1964454 agctcacacaattaaatatggagaagtggggtgtccggggtttgaaccccggcccctgcataaattatgcaatgtccct 1964376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 299
Target Start/End: Complemental strand, 44558100 - 44558027
Alignment:
Q  226 tcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    |||||||||||| ||| |||||||| |||||||||  ||||||||||   ||||||||||||||| ||||||||    
T  44558100 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccagcccctgcataaattatgcaatgtcc 44558027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 41246481 - 41246409
Alignment:
Q  229 cacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||| |||||||||||| |||||||||  |||||||||||  || | |||||| ||||||||||||||    
T  41246481 cacaattaaatgtagagaagtggggtgtccggggttcgaaccccggcccttacataaactatacaatgtccct 41246409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 299
Target Start/End: Complemental strand, 3154109 - 3154022
Alignment:
Q  212 ccagtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    ||||| ||| ||| |||||||||||| ||  ||||||||  |||||| |  ||||||||||| |||||||||||||||| ||||||||    
T  3154109 ccagtggctagaggtcacacaattaaatgaggagaagtggagtgtccagggttcgaaccccggtccctgcataaattatgcaatgtcc 3154022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 301
Target Start/End: Original strand, 24581420 - 24581511
Alignment:
Q  210 gtccagtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||| ||| | |||||||||||||||||| |||||||| ||||| ||| || ||||||||   ||||||||| ||||| |||| |||||    
T  24581420 gtccagtggctagtgctcacacaattaattgtggagaagtgaggtgttcgggatacgaaccccagcccctgcatatattatgcaatatccct 24581511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 17078560 - 17078478
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||| |||| |||||| ||||||||  |||||||| |||||||||||||  |||||||| | |||||||| |||||||    
T  17078560 gagctcacaaaatttaattgtggagaagtgaagtgtccgggattcgaaccccgactcctgcatataatatacaatatccctac 17078478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 280
Target Start/End: Complemental strand, 22333881 - 22333819
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctg 280  Q
    |||||||||||||||||||| ||| |||||||| ||||||| |  |||||||||||| |||||    
T  22333881 gctggagctcacacaattaaatgtggagaagtggggtgtccaggcttcgaaccccgacccctg 22333819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 33228900 - 33228982
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  33228900 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 33228982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 15765020 - 15764951
Alignment:
Q  234 ttaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||||||| |||||| || ||||||||||| | ||||||||| | ||| |||| |||||||    
T  15765020 ttaattgtagagaagtgaggtgtctgggattcgaaccccaacccctgcatataatatgcaatatccctac 15764951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 16385009 - 16385072
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| ||||||||  ||||||||| ||||||||||| || |||||||    
T  16385009 gagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccggtctctgcata 16385072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 16904875 - 16904828
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaac 269  Q
    |||||||||||||||||||| ||||| || ||||| ||||||||||||    
T  16904875 gagctcacacaattaattgtggagaattgaggtgtacggaattcgaac 16904828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 28153109 - 28153172
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| |||||||| |||||||||  ||||||||||||  ||||||||    
T  28153109 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccgaatcctgcata 28153172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 38557190 - 38557253
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| ||||||||| |||||  ||||||||  |||||||||||| |||||||||    
T  38557190 gagctcacacaatttaattgtagataagtgaagtgtccggggttcgaaccccgacccctgcata 38557253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 44948696 - 44948617
Alignment:
Q  225 ctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||| |||||||||||||  |||||| |  ||||||||||| |||||||||| | ||| |||| |||||||    
T  44948696 ctcacacaattaaattgtagagaagtgcagtgtccagggttcgaaccccggtccctgcatataatatgcaatatccctac 44948617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 1844920 - 1844838
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||| ||||||||   |||||||||||  ||||||||| | ||| |||| |||||||    
T  1844920 gagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccggcccctgcatataatatgcaatatccctac 1844838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 3439051 - 3438969
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  ||||||||  ||||||||||||  |||||||| | ||| |||| |||||||    
T  3439051 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctac 3438969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 17034838 - 17034756
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||| |||| |||||| ||||||||  |||||||| |||||||||||||  |||||||| | ||| |||| |||||||    
T  17034838 gagctcacataatttaattgtggagaagtggagtgtccgggattcgaaccccgactcctgcatataatatgcaatatccctac 17034756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 18278384 - 18278466
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  |||||||| ||||||||||||   |||||||| | ||| |||| |||||||    
T  18278384 gagctcacacaatttaattgtggagaagtggagtgtccgggattcgaaccccggctcctgcatataatatgcaatatccctac 18278466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 2132822 - 2132737
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||| ||||||||  ||| ||| |||||| | ||||| ||||||||||||  ||   |||||||||||||| ||||||||||||    
T  2132822 gctggatctcacacatataaatgtggagaagcggggtgttcggaattcgaacttcggctcctgcataaattatgcaatgtccctac 2132737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 17777143 - 17777204
Alignment:
Q  234 ttaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaat 295  Q
    |||| ||| |||||||| |||||||||  |||||||||||| ||||||||| | ||||||||    
T  17777143 ttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatacaat 17777204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 23405274 - 23405217
Alignment:
Q  246 aagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||| ||||||| |  |||||||||||| ||||||||| ||||| ||||||||||||    
T  23405274 aagtggggtgtccagggttcgaaccccgacccctgcatatattatgcaatgtccctac 23405217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 5613057 - 5613005
Alignment:
Q  222 gagctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccg 273  Q
    |||||||||||||||| |||| |||||||| |||||||||  |||||||||||    
T  5613057 gagctcacacaattaaattgtggagaagtggggtgtccggggttcgaaccccg 5613005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 7281656 - 7281704
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaac 269  Q
    |||||||||||||| |||||||||||||||  |||||||| ||||||||    
T  7281656 gagctcacacaatttaattgtagagaagtggagtgtccgggattcgaac 7281704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 15575055 - 15575003
Alignment:
Q  247 agtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    |||| ||||| ||| ||||||||||||  ||||||||||||||| ||||||||    
T  15575055 agtgcggtgttcgggattcgaaccccggcccctgcataaattatgcaatgtcc 15575003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 19958202 - 19958170
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtg 250  Q
    |||||||||||||||||||||||| ||||||||    
T  19958202 gctggagctcacacaattaattgtggagaagtg 19958170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 34149650 - 34149710
Alignment:
Q  225 ctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||| |||||| |||||||  |||||||||  |||||||||||||| |||||||    
T  34149650 ctcacacaatttaattgtggagaagtagggtgtccggggttcgaaccccgatcactgcata 34149710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 2930 - 3009
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||||||| |||||||| |||||||||  |||||||||||  ||||||||||||||| ||||||||||    
T  2930 gagctcacacaattaattgtcgagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccct 3009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 8e-21; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 11231522 - 11231443
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||||||| |||||||| |||||||||  |||||||||||  ||||||||||||||| ||||||||||    
T  11231522 gagctcacacaattaattgtcgagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccct 11231443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 12770470 - 12770390
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||||||||||||| ||| |||||||| |||||||||  |||||||||||  ||||||||||||||| |||||||||||    
T  12770470 gagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtcccta 12770390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 481110 - 481032
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||| ||| |||||||| |||||||||  |||||||| ||  ||||||||||||||| ||||||||||||    
T  481110 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccgcggcccctgcataaattatgcaatgtccctac 481032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 27077064 - 27077146
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||| ||||||||| ||||||||||||| ||||||||| | ||| |||| |||||||    
T  27077064 gagctcacacaatttaattgtggagaagtggggtgtccgggattcgaaccccgacccctgcatataatatgcaatatccctac 27077146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 15856474 - 15856555
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| ||| |||||||| ||||||||   || |||||||| |||||| ||||||||| ||||||||||||    
T  15856474 gagctcacacaattaaatgtggagaagtggggtgtccgaggtttgaaccccggtccctgtataaattatgcaatgtccctac 15856555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 25824870 - 25824951
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||  ||| |||||||| |||||| ||  |||||||||||| || |||||||||||| ||||||||||||    
T  25824870 gagctcacacaattatatgttgagaagtggggtgtctggggttcgaaccccgacccttgcataaattatgcaatgtccctac 25824951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 25890380 - 25890453
Alignment:
Q  230 acaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||| |||||||| |||||||||  |||||||||||  || |||||||||||| ||||||||||||    
T  25890380 acaattaattgtggagaagtggggtgtccggggttcgaaccccggcccttgcataaattatgcaatgtccctac 25890453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 25812177 - 25812256
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||| ||| |||||||| |||||| ||  |||||||||||  |||| |||||||||| ||||||||||    
T  25812177 gagctcacacaattaaatgttgagaagtggggtgtctggggttcgaaccccggaccctccataaattatgcaatgtccct 25812256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 31406859 - 31406780
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||| ||| |||||||||||| ||||   |||||||||||  ||||||||||||||| ||| ||||||    
T  31406859 gagctcacacaattaaatgtggagaagtgtggtatccgaggttcgaaccccggcccctgcataaattatgcaacgtccct 31406780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 301
Target Start/End: Complemental strand, 38283222 - 38283147
Alignment:
Q  226 tcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||| ||| |||||||| |||||| ||  |||||||||||  |||||||||||||||| |||||||||    
T  38283222 tcacacaattaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattatataatgtccct 38283147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 41272197 - 41272114
Alignment:
Q  221 ggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctact 304  Q
    |||||||||||| |||| ||| ||||||||  |||||| || ||||||||||   ||||||||||||||| |||||||||||||    
T  41272197 ggagctcacacatttaaatgtggagaagtggtgtgtccagagttcgaaccccagcccctgcataaattatgcaatgtccctact 41272114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 301
Target Start/End: Complemental strand, 550405 - 550324
Alignment:
Q  220 tggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||||| |||| |||  |||||||  |||| ||  ||||||||||||| ||||||||||||||| ||||||||||    
T  550405 tggagctcacacatttaaatgtgaagaagtggagtgttcgagattcgaaccccgacccctgcataaattatgcaatgtccct 550324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 302
Target Start/End: Original strand, 20872430 - 20872506
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    ||||||||||||| ||| | |||||| ||||| ||| |||||||| |||| ||||||||||||||| |||||||||||    
T  20872430 ctcacacaattaaatgtgg-gaagtggggtgttcgggattcgaactccgacccctgcataaattatgcaatgtcccta 20872506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 22274579 - 22274660
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||||| |||||||| |||||||||  |||||||||||   |||||||| | ||| |||| |||||||    
T  22274579 gagctcacacaattaattgtggagaagtggggtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctac 22274660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 22717887 - 22717818
Alignment:
Q  228 acacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgt 297  Q
    |||||||||||||| |||||||| |||||||||  |||||||| ||  ||||||||||||||| ||||||    
T  22717887 acacaattaattgtcgagaagtggggtgtccggggttcgaacctcggcccctgcataaattatgcaatgt 22717818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 20894667 - 20894745
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||||||||||| |||||||| | ||| | || |||||||||||  || |||||||||||| ||||||||||    
T  20894667 gagctcacacaattaattgtggagaagtgagatgt-ctgagttcgaaccccggcccttgcataaattatgcaatgtccct 20894745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 33473322 - 33473385
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| ||||||  |||||||  |||||||| |||||||||||||||||||||||    
T  33473322 gagctcacacaatttaattgtgaagaagtgaagtgtccgggattcgaaccccgatccctgcata 33473385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 43847037 - 43846962
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgt 297  Q
    |||||||||||||||| ||| |||||||| ||||||| |  |||||||  ||| ||||||||||||||| ||||||    
T  43847037 gagctcacacaattaaatgtggagaagtggggtgtccagggttcgaacatcgacccctgcataaattatgcaatgt 43846962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 36433635 - 36433557
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaa-ccccgatccctgcataaattatacaatgtcccta 302  Q
    ||||||||||||| ||| ||||| || ||||||||  ||||||| |||| | ||||| |||||||||||||||||||||    
T  36433635 ctcacacaattaaatgtggagaaatggggtgtccgagattcgaacccccaacccctgtataaattatacaatgtcccta 36433557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 44444643 - 44444565
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||||||| |||||||| |||||||||  ||||||||||   ||||||||| | ||| |||| |||||||    
T  44444643 ctcacacaattaattgtggagaagtggggtgtccggggttcgaaccccagcccctgcatataatatgcaatatccctac 44444565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 30676272 - 30676353
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| ||| ||||| || |||||  || |||||||||| || | || |||||||||||||||||| ||||    
T  30676272 gagctcacacaattaaatgtggagaaatggggtgtttgggattcgaaccctgacctctacataaattatacaatgtctctac 30676353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 2114989 - 2114937
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaacc 270  Q
    |||||||| ||||||||||| ||| |||||||| |||||||||| ||||||||    
T  2114989 gctggagcccacacaattaaatgtggagaagtggggtgtccggagttcgaacc 2114937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 298
Target Start/End: Original strand, 3187385 - 3187461
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtc 298  Q
    |||||||||||||||| ||| ||| ||||  ||||||| | ||||||| || ||| ||||||||||||| |||||||    
T  3187385 gagctcacacaattaaatgtggaggagtggagtgtccgaagttcgaactccaatctctgcataaattatgcaatgtc 3187461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 43980281 - 43980361
Alignment:
Q  223 agctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    ||||||||||||||| |||| |||||||   ||||||||  |||||||||||||||||||||| | ||| |||| ||||||    
T  43980281 agctcacacaattaaattgtggagaagttgagtgtccggggttcgaaccccgatccctgcatataatatgcaatatcccta 43980361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 302
Target Start/End: Complemental strand, 2792884 - 2792801
Alignment:
Q  220 tggagctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||||||||||||||| |||| ||||||||  ||||||||  |||||||||||  ||||||||| | ||| |||| ||||||    
T  2792884 tggagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcatataatatgcaatatcccta 2792801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 23261404 - 23261341
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| ||||||||  ||||||||  ||||||||||| ||||||||||    
T  23261404 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggtccctgcata 23261341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 38774174 - 38774111
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||| ||| |||||| ||||||||  ||||||| | ||||||||||||||||||||||    
T  38774174 gagctcacacgatttaattgtggagaagtggagtgtccgaagttcgaaccccgatccctgcata 38774111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 5328534 - 5328616
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||| || |||||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  5328534 gagctcacacattttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 5328616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 8265371 - 8265289
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  ||||||||  ||||||||| || ||||||||| | ||| |||| |||||||    
T  8265371 gagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccctgacccctgcatataatatgcaatatccctac 8265289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 17698625 - 17698543
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  |||||||| ||||||||||||   |||||||| | ||| |||| |||||||    
T  17698625 gagctcacacaatttaattgtggagaagtggagtgtccgggattcgaaccccggctcctgcatataatatgcaatatccctac 17698543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 295
Target Start/End: Original strand, 29733972 - 29734046
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaat 295  Q
    |||||||||||||| |||||||||||||||  || |||||  ||||||||||||  |||||||| | ||||||||    
T  29733972 gagctcacacaatttaattgtagagaagtggagtatccggggttcgaaccccgactcctgcatataatatacaat 29734046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 31450924 - 31451006
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  ||||||||| |||||||||||   |||||||| | ||| |||| |||||||    
T  31450924 gagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccggctcctgcatataatatgcaatatccctac 31451006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 34894472 - 34894390
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| || ||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  34894472 gagctcacacaatttaactgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 34894390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 38219535 - 38219617
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  ||||||||  ||||||||||||  |||||||| | ||| |||| |||||||    
T  38219535 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctac 38219617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 40393445 - 40393347
Alignment:
Q  198 tatttatttttggtccagtagc-tggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaat 295  Q
    |||||||||||  || |||||| | ||||||||  |||||| ||| |||||| | ||||| |||  |||||||||||| ||||||||||||||| ||||    
T  40393445 tatttattttttttctagtagcctagagctcacctaattaaatgtggagaagaggggtgttcggggttcgaaccccgacccctgcataaattatgcaat 40393347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 43053853 - 43053915
Alignment:
Q  223 agctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||||| |||||| ||||||||  ||||||| ||||||||||||||  ||||||||    
T  43053853 agctcacacaatttaattgtggagaagtggagtgtccgaaattcgaaccccgactcctgcata 43053915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 44156822 - 44156733
Alignment:
Q  213 cagtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||| |||||||||||||||||||| |||  ||||| | ||||||| |  ||||||| |||  ||||||||||||||| ||||||| ||||    
T  44156822 cagtggctggagctcacacaattaaatgtgaagaaggg-ggtgtccagggttcgaactccgtcccctgcataaattatgcaatgtctctac 44156733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 3949049 - 3949086
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccg 259  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  3949049 gagctcacacaattaattgtggagaagtggggtgtccg 3949086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 26797051 - 26796979
Alignment:
Q  230 acaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||| |||  ||||||| |||||||| |||||||||| |  |||||||||||| ||| ||||||||||||    
T  26797051 acaattaaatgtgaagaagtggggtgtccg-aattcgaacctcagtccctgcataaaatatgcaatgtccctac 26796979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 26823776 - 26823695
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    |||||||||||||||  ||| ||| |||||| |||||||||||  ||||||| |||| || | ||||||||||  |||||||    
T  26823776 gctggagctcacacatataaatgtggagaagggtggtgtccggggttcgaactccgacccatacataaattatgtaatgtcc 26823695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 3828412 - 3828356
Alignment:
Q  229 cacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataa 285  Q
    ||||||||||||| |||||||| |||||||||  ||||||||| || |||| |||||    
T  3828412 cacaattaattgtggagaagtggggtgtccggggttcgaaccctgacccctacataa 3828356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 18412617 - 18412577
Alignment:
Q  263 ttcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||| |||| ||||||||||||||| ||||||||||||    
T  18412617 ttcgaactccgacccctgcataaattatgcaatgtccctac 18412577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 24319115 - 24319034
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||||| ||||||||  ||||||||  |||||||||||  ||||||||||||||| ||||||||||||    
T  24319115 gagctcacacaattaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctac 24319034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 304
Target Start/End: Complemental strand, 607087 - 607007
Alignment:
Q  224 gctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctact 304  Q
    |||||||||||||||||| |||||||| ||||| |||| |||||||| || |||||||||||||||| |||| ||||||||    
T  607087 gctcacacaattaattgtggagaagtggggtgttcggagttcgaacctcggtccctgcataaattatgcaatatccctact 607007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 17534946 - 17534868
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||| ||| |||||||  |||||||||| |||||||||||  ||||||||||||||| ||||||||||||    
T  17534946 ctcacacaattaaatgtggagaagtcaggtgtccggagttcgaaccccggcccctgcataaattatgcaatgtccctac 17534868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 23610283 - 23610368
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||| |||||||||||||  ||||||| ||||||| |  || ||||||||| ||||||||||||||| ||||||||||||    
T  23610283 gctggagctcgcacaattaattgtgaagaagtggggtgtccagcgtttgaaccccgacccctgcataaattatgcaatgtccctac 23610368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 32788822 - 32788903
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||| |||||||| |||  ||||||| |||||||||| |||||||||| | ||||||||||||||||||||| ||||||    
T  32788822 gagctcatacaattaaatgtgtagaagtggggtgtccggagttcgaaccccaacccctgcataaattatacaatgaccctac 32788903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 31952368 - 31952295
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtc 298  Q
    |||| |||||||||||| |||||||| |||||||||  |||||||||| | |||||||||||||||| ||||||    
T  31952368 ctcatacaattaattgtggagaagtggggtgtccggggttcgaaccccaacccctgcataaattatataatgtc 31952295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 34268384 - 34268303
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||||||||||  ||||||  ||||| |||  ||||||||| || ||||||||||||||| ||||||||||||    
T  34268384 gagctcacacaattaattgtgaagaagtagggtgttcggggttcgaaccctgacccctgcataaattatgcaatgtccctac 34268303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 35038668 - 35038737
Alignment:
Q  220 tggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaatta 289  Q
    |||||||| ||||||||| ||||||||| || |||||||||  |||||||||||  ||||||||||||||    
T  35038668 tggagctcgcacaattaaatgtagagaaatggggtgtccggggttcgaaccccggcccctgcataaatta 35038737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 304
Target Start/End: Original strand, 978114 - 978184
Alignment:
Q  234 ttaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctact 304  Q
    |||||||| |||||||| |||||||||  |||||||||||| ||||||||| | ||| |||| ||||||||    
T  978114 ttaattgtggagaagtggggtgtccggtgttcgaaccccgacccctgcatataatatgcaatatccctact 978184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 2488855 - 2488935
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||   | ||||||| | |||||||  ||||||| |||| ||||||| ||||||||||||||||||||    
T  2488855 gagctcacacaattaatatga-agaagtgggatgtccggggttcgaactccgacccctgcagaaattatacaatgtccctac 2488935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 32620039 - 32620116
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    ||||||| |||||||| ||| ||||| || ||||||| | ||||||||||| |  |||||||||||||| ||||||||    
T  32620039 gagctcatacaattaaatgtggagaaatggggtgtccaggattcgaaccccaactcctgcataaattatgcaatgtcc 32620116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 3294864 - 3294785
Alignment:
Q  225 ctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||| ||||||  ||||||| |||||||||  |||||||||||| ||||||||| | ||| |||| |||||||    
T  3294864 ctcacacaatttaattgtgaagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctac 3294785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 7771381 - 7771310
Alignment:
Q  230 acaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||| ||| |||||| | ||| ||||| ||| |||||| || ||||||||||||||| ||||||||||    
T  7771381 acaattaaatgtggagaagcgaggtatccgggatttgaaccctgacccctgcataaattatgcaatgtccct 7771310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 8297730 - 8297667
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||  |||||||||    
T  8297730 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcata 8297667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 10517302 - 10517239
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| ||||||||  ||||||||  |||||||||||| |||||||||    
T  10517302 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgacccctgcata 10517239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 18904372 - 18904305
Alignment:
Q  218 gctggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||||||| || || ||| |||||||| |||||||||  |||||||||||| |||||||||    
T  18904372 gctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcata 18904305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 273
Target Start/End: Original strand, 29646512 - 29646567
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccg 273  Q
    |||||||||||||||||||| ||| |||||||| |||||||||  ||||| |||||    
T  29646512 gctggagctcacacaattaaatgtggagaagtggggtgtccggggttcgacccccg 29646567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 33646938 - 33646875
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| |||||||| ||||||||   |||||||||||| |||||||||    
T  33646938 gagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccgacccctgcata 33646875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 2500481 - 2500563
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  ||||||||||||||||| |||| | || |||| | ||| |||| |||||||    
T  2500481 gagctcacacaatttaattgtggagaagtggagtgtccggaattcgaactccgacctctacatataatatgcaatatccctac 2500563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 9372160 - 9372250
Alignment:
Q  214 agtagctggagctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||| || ||||||||||||| |||| ||||||||  |||||| |  |||||||||||| ||||||||| | ||| |||| |||||||    
T  9372160 agtagctagaactcacacaattaaattgtggagaagtggagtgtccagggttcgaaccccgacccctgcatataatatgcaatatccctac 9372250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 12284224 - 12284142
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  || |||||| ||||||||||||  |||||||| | ||| |||| |||||||    
T  12284224 gagctcacacaatttaattgtggagaagtggagtttccggagttcgaaccccgacacctgcatataatattcaatatccctac 12284142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 15091535 - 15091469
Alignment:
Q  237 attgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||| |||||||| ||||||||| ||||||||||||  ||||||||| | ||| |||| |||||||    
T  15091535 attgtggagaagtggggtgtccgggattcgaaccccggcccctgcatataatatgcaatatccctac 15091469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 22997439 - 22997357
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||  |||||||||  |||||||||||| |||| |||| | ||| |||| |||||||    
T  22997439 gagctcacacaatttaattgtggagaagtagggtgtccggggttcgaaccccgacccctacatataatattcaatatccctac 22997357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 23790962 - 23791044
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||  |||||||||  |||||||||||| |||| |||| | ||| |||| |||||||    
T  23790962 gagctcacacaatttaattgtggagaagtagggtgtccggggttcgaaccccgacccctacatataatattcaatatccctac 23791044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 32283637 - 32283559
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||| |||||| ||| || |||||  ||||| ||  |||||||||||| || |||||||||||| ||||||||||||    
T  32283637 ctcacataattaaatgtggaaaagtgaagtgtctggggttcgaaccccgacccttgcataaattatgcaatgtccctac 32283559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 15305072 - 15305153
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||| |||||||||| ||||| ||  ||||  ||| |||||||||| |  |||||||||||||| |||||| |||||    
T  15305072 gagctcacataattaattgtggagaaatggagtgtttggagttcgaaccccaacacctgcataaattatgcaatgttcctac 15305153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 302
Target Start/End: Complemental strand, 32388285 - 32388248
Alignment:
Q  265 cgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  32388285 cgaaccccgacccctgcataaattatgcaatgtcccta 32388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 8443641 - 8443573
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattat 290  Q
    ||||||||| |||||| ||| |||||||| |||||||||  ||| ||||  || |||||||||||||||    
T  8443641 gagctcacagaattaaatgtggagaagtggggtgtccggggttctaaccatgacccctgcataaattat 8443573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 8452445 - 8452377
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattat 290  Q
    ||||||||| |||||| ||| |||||||| |||||||||  ||| ||||  || |||||||||||||||    
T  8452445 gagctcacagaattaaatgtggagaagtggggtgtccggggttctaaccatgacccctgcataaattat 8452377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 30705063 - 30705011
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccg 273  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||    
T  30705063 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccg 30705011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 30938449 - 30938409
Alignment:
Q  263 ttcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||| |||||||||| ||||| ||||||||||||    
T  30938449 ttcgaaccccggtccctgcatatattatgcaatgtccctac 30938409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 8e-18; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 210 - 303
Target Start/End: Original strand, 28758373 - 28758467
Alignment:
Q  210 gtccagtagctggagctcacacaattaattgtagagaagtgtggtgtccgga-attcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||| ||||||||||| |||||||| ||| |||||||| ||||||||||  || |||||||||  |||||||||||||| ||||||||||||    
T  28758373 gtccagtggctggagctcatacaattaaatgtggagaagtgaggtgtccggaggtttgaaccccgactcctgcataaattatgcaatgtccctac 28758467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 299
Target Start/End: Complemental strand, 24456302 - 24456214
Alignment:
Q  210 gtccagtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    ||||||| ||||||||||||||| |||| ||| |||||||| |||||||||  ||||||| |||| ||||||||||||||| ||||||||    
T  24456302 gtccagtggctggagctcacacatttaactgtggagaagtg-ggtgtccggggttcgaactccgacccctgcataaattatgcaatgtcc 24456214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 7171834 - 7171762
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattat 290  Q
    |||||||||||||||||||||||| |||||||| |||||| ||  |||||||||||  |||||||||||||||    
T  7171834 gctggagctcacacaattaattgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattat 7171762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 20145524 - 20145613
Alignment:
Q  214 agtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||| |||||||||||||||| ||| |||||||| ||||||||   |||||||||||  || |||||||||||| |||| |||||||    
T  20145524 agtagctagagctcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccccggcccttgcataaattatgcaatatccctac 20145613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 33018490 - 33018574
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||  ||| ||| |||||||| |||||||| | |||||||||||| ||||||||||||||| |||| |||||||    
T  33018490 gctggagctcacacatataaatgtggagaagtggggtgtccgaagttcgaaccccga-ccctgcataaattatgcaatatccctac 33018574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 4068086 - 4068003
Alignment:
Q  220 tggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||| ||| |||||||| |||||||||  |||||||| ||  ||||||||||| ||| || |||||||||    
T  4068086 tggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcgccccctgcataaaatatgcattgtccctac 4068003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 28822722 - 28822805
Alignment:
Q  220 tggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||  ||||| | | |||||||| ||||| |||  |||||| ||||||| ||||||||||||||||||||||||||    
T  28822722 tggagctcacattattaaatatggagaagtggggtgttcggggttcgaatcccgatctctgcataaattatacaatgtccctac 28822805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 6558904 - 6558822
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||  |||||||||| |||||||||||| ||||||||| | ||| |||| |||||||    
T  6558904 gagctcacacaatttaattgtggagaagtagggtgtccggagttcgaaccccgacccctgcatataatatgcaatatccctac 6558822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 37684515 - 37684593
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||||||| ||| || ||||| |||||| ||| |||||||| ||| | ||||||||||||| ||||||||||    
T  37684515 agctcacacaattaaatgtggataagtggggtgtctggagttcgaacctcgacctctgcataaattatgcaatgtccct 37684593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 19985602 - 19985521
Alignment:
Q  223 agctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||| |||||| |||||||   ||||||||| ||||||| |||||||||||||| ||||| |||| |||||||    
T  19985602 agctcacacaatttaattgtggagaagttgagtgtccggagttcgaactccgatccctgcatatattatgcaatatccctac 19985521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 41083506 - 41083586
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||| || ||||||  || |||||||| |||||||||| |||||||||||| ||||||||||||||| ||||||| ||||    
T  41083506 gagctcccaaaattaaacgtggagaagtggggtgtccgga-ttcgaaccccgacccctgcataaattatgcaatgtctctac 41083586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 8571895 - 8571827
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattat 290  Q
    |||||||||||||||| ||| |||||||  ||||| |||  |||||||||||| |||||||||||||||    
T  8571895 gagctcacacaattaaatgtggagaagtagggtgttcggggttcgaaccccgacccctgcataaattat 8571827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 302
Target Start/End: Complemental strand, 7462890 - 7462851
Alignment:
Q  263 ttcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  7462890 ttcgaaccccgacccctgcataaattatacaatgtcccta 7462851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 37553894 - 37553972
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||||||| ||| || ||||| |||||| ||| |||||||| ||  | ||||||||||||| ||||||||||    
T  37553894 agctcacacaattaaatgtggataagtggggtgtctggagttcgaacctcggcctctgcataaattatgcaatgtccct 37553972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 436529 - 436610
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||| |||||| |||   |||||| ||||| ||  ||||||||| ||| || |||||||||||||||||||||||||    
T  436529 gagctcacataattaaatgtgatgaagtgaggtgttcgagattcgaaccgcgacccttgcataaattatacaatgtccctac 436610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 12474083 - 12474003
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||||||| || |||||||| ||||| |||| |||||||  |   |||||||||||||||||||||| |||||    
T  12474083 gagctcacacaattaat-gtggagaagtggggtgttcggagttcgaacttcagcccctgcataaattatacaatgttcctac 12474003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 303
Target Start/End: Complemental strand, 20430663 - 20430586
Alignment:
Q  226 tcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||  || ||||| || |||||||||| ||||||||||   | |||||||||||||| |||||||||||    
T  20430663 tcacacaattaaaggtggagaaatggggtgtccggatttcgaaccccagcctctgcataaattatataatgtccctac 20430586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 24477931 - 24477846
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||||| ||| |||||||| ||||||||   |||||||| |   ||||||||| ||||| ||| ||||||||    
T  24477931 gctggagctcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccacataccctgcatatattatgcaacgtccctac 24477846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 42916491 - 42916410
Alignment:
Q  223 agctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    ||||||||||||| |||||| |||||||| |||||||||  |||||||||||  ||||||||| |  ||||||| |||||||    
T  42916491 agctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataacatacaatatccctac 42916410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 301
Target Start/End: Original strand, 17693153 - 17693232
Alignment:
Q  221 ggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    |||||||||||| |||  |||||||||||| |||||| ||  ||||||| |||| ||||||||||||||| || |||||||    
T  17693153 ggagctcacacatttagatgtagagaagtgcggtgtctggggttcgaactccga-ccctgcataaattatgcagtgtccct 17693232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 3741061 - 3740994
Alignment:
Q  218 gctggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||||||| || || ||| |||||||| |||||||||  |||||||||||| |||||||||    
T  3741061 gctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcata 3740994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 12053479 - 12053558
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||||||||| || |||||||| |||||| ||  ||||||||||   |||| |||||| ||| ||||||||||    
T  12053479 gagctcacacaattaatcgtggagaagtggggtgtctggggttcgaacccctgcccctacataaaatatgcaatgtccct 12053558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 15241499 - 15241436
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||| |||||| |||||||| ||||||||   |||||||||||| |||||||||    
T  15241499 gagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccgacccctgcata 15241436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 22228929 - 22228992
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||| |||||||| |||||||||||||||  ||||||||| ||||||| |||| |||||||||    
T  22228929 gagcttacacaatttaattgtagagaagtggagtgtccggagttcgaactccgacccctgcata 22228992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 36124502 - 36124439
Alignment:
Q  222 gagctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||| |||| |||| ||||||||  |||||||| ||||||||||||| |||||||||    
T  36124502 gagctcacacagttaaattgtggagaagtggagtgtccgggattcgaaccccgacccctgcata 36124439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 3198426 - 3198348
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||| |||||| ||| |||||||  |||||||||  |||||||| | | ||||||||| ||||| ||||||||||||    
T  3198426 ctcacataattaaatgtggagaagtagggtgtccggggttcgaacctcaacccctgcatatattatgcaatgtccctac 3198348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 11897351 - 11897269
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  ||||||||  ||||||||||||  |||||||| | ||| |||| |||||||    
T  11897351 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctac 11897269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 284
Target Start/End: Complemental strand, 15210888 - 15210830
Alignment:
Q  226 tcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||| |||| ||| |||||||| ||||||| || ||| ||||||||||||||||||    
T  15210888 tcacacatttaaatgtggagaagtggggtgtccagagttcaaaccccgatccctgcata 15210830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 18050282 - 18050220
Alignment:
Q  222 gagctcacacaattaa-ttgtagagaagtgtggtgtccggaattcgaaccccgatccctgcat 283  Q
    |||||||||||||||| |||| ||||||||  ||||||||  |||||||||||| ||||||||    
T  18050282 gagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccgacccctgcat 18050220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 18928823 - 18928741
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| || ||| || ||||| ||||||||   ||||||| |||| ||||||||||||||| |||| |||||||    
T  18928823 gagctcacacaatttaaatgtggaaaagtgaggtgtccgtggttcgaacaccgacccctgcataaattatgcaatatccctac 18928741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 284
Target Start/End: Original strand, 23292389 - 23292447
Alignment:
Q  226 tcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||||||| |||||||| ||||||||   |||||||||| | |||||||||    
T  23292389 tcacacaattaattgtggagaagtggggtgtccgaggttcgaaccccaaaccctgcata 23292447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 36888362 - 36888444
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  ||||||||  ||||||||||||  |||||||| | ||| |||| |||||||    
T  36888362 gagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctac 36888444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 43580981 - 43580899
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| ||||||||  |||||||| ||||||||||||   |||||||| | ||| |||| |||||||    
T  43580981 gagctcacacaatttaattgtggagaagtggagtgtccgggattcgaaccccggctcctgcatataatatgcaatatccctac 43580899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 3515433 - 3515482
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaacc 270  Q
    |||||||||||||| |||||| ||||||||  ||||||||||||||||||    
T  3515433 gagctcacacaatttaattgtggagaagtggagtgtccggaattcgaacc 3515482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 9958678 - 9958617
Alignment:
Q  224 gctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    |||||||||||| |||||  |||||||| |||||||||  |||||||| |||||||||||||    
T  9958678 gctcacacaatttaattggggagaagtgaggtgtccggggttcgaacctcgatccctgcata 9958617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 19655940 - 19656017
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    ||||| |||||||||| | | |||||||| ||| |||||  ||||||| |||  || |||||||||||||||||||||    
T  19655940 gagcttacacaattaaatatggagaagtggggtatccggggttcgaacaccggcccgtgcataaattatacaatgtcc 19656017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 301
Target Start/End: Complemental strand, 23155997 - 23155916
Alignment:
Q  220 tggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||||| | || ||| |||||||  ||||| |||| |||||||| ||  | ||||||||||||| ||||||||||    
T  23155997 tggagctcacacattaaaatgtggagaagttgggtgttcggagttcgaacctcggcctctgcataaattatgcaatgtccct 23155916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 25729397 - 25729470
Alignment:
Q  212 ccagtagctggagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||| ||| |||||||||||||| |||||| ||||||||  ||||| ||  |||||||||||| |||||||||    
T  25729397 ccagtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccgacccctgcata 25729470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 32550278 - 32550197
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||| ||| ||| |||| ||||| |||  ||||||||||   || |||||||||||| ||||||| ||||    
T  32550278 gagctcacacaattaaatgtggagtagtggggtgtacggggttcgaacccctgcccatgcataaattatgcaatgtctctac 32550197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 33735984 - 33736063
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||||||||| ||||| || |||||| ||  |||||||||||| ||||||||| | ||| |||| |||||||    
T  33735984 gagctcacacaattaattgtggagaactg-ggtgtcagg-gttcgaaccccgacccctgcatataatatgcaatatccctac 33736063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 3166082 - 3166002
Alignment:
Q  223 agctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||| |||| ||| || ||||| || |||||   |||||||||| | |||| |||||||||| ||||||||||||    
T  3166082 agctcacacagttaaatgtggaaaagtggggcgtccgaggttcgaaccccaacccctacataaattatgcaatgtccctac 3166002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 290
Target Start/End: Complemental strand, 3294150 - 3294114
Alignment:
Q  254 tgtccggaattcgaaccccgatccctgcataaattat 290  Q
    ||||||||||||||||||||  |||||||||||||||    
T  3294150 tgtccggaattcgaaccccggcccctgcataaattat 3294114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 299
Target Start/End: Complemental strand, 7443444 - 7443364
Alignment:
Q  220 tggagctcacacaat-taattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcc 299  Q
    ||||||||||||| | ||| ||| |||||||| ||||||  |  ||||||||||   ||||||||||||||||||||||||    
T  7443444 tggagctcacacattataaatgtggagaagtggggtgtcaagggttcgaacccctgcccctgcataaattatacaatgtcc 7443364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 13621916 - 13621976
Alignment:
Q  225 ctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcata 284  Q
    ||||||||||| |||||| |||||||| |||||||||  |||||||||||  |||||||||    
T  13621916 ctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcata 13621976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 34208473 - 34208425
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccg 273  Q
    ||||||||||||||||| |||||||| |||||| ||  |||||||||||    
T  34208473 ctcacacaattaattgtggagaagtggggtgtctggggttcgaaccccg 34208425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 302
Target Start/End: Original strand, 28785 - 28869
Alignment:
Q  218 gctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||||||||||||||||| ||| |||||||| |||||||||  |||||||||||  ||||||||||| |||  ||||||||||    
T  28785 gctggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaagtatgtaatgtcccta 28869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 303
Target Start/End: Complemental strand, 15122 - 15026
Alignment:
Q  207 ttggtccagtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||| ||||||| ||||||||| |||||| ||| |||||||| |||||  ||  ||||||||  || ||||||||||||||| ||||||||||||    
T  15122 ttggtctagtagctagagctcacataattaaatgtggagaagtggggtgtttggggttcgaaccatgacccctgcataaattatgcaatgtccctac 15026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 21893 - 21816
Alignment:
Q  225 ctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||| |||||| ||| ||||| || ||||||||| |||||| |||||  |||||||||||||||||||||| ||||    
T  21893 ctcacaaaattaaatgtggagaattggggtgtccgggattcgatccccggcccctgcataaattatacaatgtgccta 21816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 20387 - 20300
Alignment:
Q  214 agtagctggagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||| || ||||| ||||||| ||| || ||||| ||| |||||  |||||||| |||||| |||||||||||| ||||||||||    
T  20387 agtagctagaactcacgcaattaaatgtggataagtggggtatccggggttcgaacctcgatccatgcataaattatgcaatgtccct 20300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 10793 - 10875
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctac 303  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||  ||||||||| | ||| |||| |||||||    
T  10793 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctac 10875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 304
Target Start/End: Complemental strand, 4984 - 4901
Alignment:
Q  222 gagctcacacaatta-attgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccctact 304  Q
    ||||||||||||||| ||||| ||||||||  ||||||||  ||| ||| || ||||||||||| ||||| |||| ||||||||    
T  4984 gagctcacacaattatattgtggagaagtgaagtgtccggggttcaaactccaatccctgcatatattatgcaatatccctact 4901  T

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Target: scaffold0246 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 24482 - 24403
Alignment:
Q  222 gagctcacacaattaattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtccct 301  Q
    ||||||||||| |||| |||  |||||||  ||||||||  |||||||||||  ||||||||||||||| |||| |||||    
T  24482 gagctcacacatttaaatgtgaagaagtggagtgtccggggttcgaaccccggcccctgcataaattatgcaatatccct 24403  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 18446 - 18527
Alignment:
Q  222 gagctcacacaatt-aattgtagagaagtgtggtgtccggaattcgaaccccgatccctgcataaattatacaatgtcccta 302  Q
    |||||||||||||| |||||| |||||||| |||||||||  |||||||||||  ||||| ||| | ||| |||| ||||||    
T  18446 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgtatataatatgcaatatcccta 18527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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