View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19951_high_9 (Length: 540)
Name: NF19951_high_9
Description: NF19951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19951_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 482; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 1 - 525
Target Start/End: Original strand, 26436831 - 26437356
Alignment:
| Q |
1 |
tcaataaattaatagtagtgatccgctaatattattatccttttcaaactttatgccataaatacactcacgtgacatacaacatccatatttgtatata |
100 |
Q |
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||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26436831 |
tcaataaattaatagcagtgatccactaacattattatccttttcaaactttatgccataaatacactcacgtgacatacaacatccatatttgtatata |
26436930 |
T |
|
| Q |
101 |
tacagtatttttgtagtataggtacttgtacacttttttccttaaaaaagtatttgtataaatagatgattttaatttttatcattattcc-cgcaaacg |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
26436931 |
tacagtatttttgtagtataggtacttgtacacttttttccttaaaaaagtatttgtataaatagatgattttaatttttatcattattcctcgcaaacg |
26437030 |
T |
|
| Q |
200 |
tatcataaaaaattaagtacattttcaaaagtatcattcatcgaatttgtcaatggagtattaagcaattgatattttttaagagtaataatacagtatt |
299 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26437031 |
tatcataaaaaattaagtacattttcagaagtatcattcatcgaatttgtcaatggagtattaagcaattgatattttttaagagtaataatacagtatt |
26437130 |
T |
|
| Q |
300 |
aaattaaaatcttactaccaaattcaaaacgtggaagagtgagcattcatcaaacaaatctacgagattgaattgaatagaaaatgatcaaaaaccttgg |
399 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
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| T |
26437131 |
aaattaaattcttactaccaaattcaaaacgtggaagagtgagcattcatcaaacaaatcaaccagattgaattgaatagaaaatgatcaaaaaccttgg |
26437230 |
T |
|
| Q |
400 |
cataataattgtgaatgataccgaagggtcatgagttgaaataattgacatatttaattaatttattccttctcatgtgcctcatgttggaagtgtcaaa |
499 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
26437231 |
cataataatagtgaatgataccgaagggtcatgagttgaaataattgacatatttaattaatttattccttctcatgtgcctcatgtttgaagtgtcaaa |
26437330 |
T |
|
| Q |
500 |
agacacattgagaccatcattttctc |
525 |
Q |
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|||||||||||||||||||||||||| |
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| T |
26437331 |
agacacattgagaccatcattttctc |
26437356 |
T |
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