View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19951_low_37 (Length: 307)
Name: NF19951_low_37
Description: NF19951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19951_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 257; Significance: 1e-143; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 13813618 - 13813921
Alignment:
| Q |
1 |
accccttacgaccctgtctctgccttccaccattattggacatttttgttggtggaccataaaagttatctatgagagaaaacccttctagccctatctt |
100 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
13813618 |
accccttacgaccctgtccctgccttccaccattattggacatttttgttggtggaccataaaagttatctatgagagcaaacccttctagccctatctt |
13813717 |
T |
|
| Q |
101 |
aacaagatctggttgaggtgccataaaagaaaatgtgtgtgacaaagtatata--tctataggaaacaatgtatttgagctgtttcttgattgagagatt |
198 |
Q |
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||||||||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||||||||| | ||||| |||||||||||||||||||| |
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| T |
13813718 |
aacaagatctggttgaggtgccatagaagataatgtgtgtgataaagtatatatctctataggaaacaatgcaattgaggtgtttcttgattgagagatt |
13813817 |
T |
|
| Q |
199 |
aagagagtactccattatttatacactaagctaatatggtactttacctaaaaagtatcaagggttttattttattgtacattattattaagagatggcc |
298 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13813818 |
aagagagtactccattatttatacacttagctaatatggtactttacctaaaaagtatcaagggttttattttattgtacattattattaagagatggcc |
13813917 |
T |
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| Q |
299 |
tttg |
302 |
Q |
| |
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|||| |
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| T |
13813918 |
tttg |
13813921 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 13826161 - 13826467
Alignment:
| Q |
1 |
accccttacgaccctgtctctgccttccaccattattggacatttttgttggtggaccataaaagttatctatgagagaaaacccttctagccctatctt |
100 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
13826161 |
accccttacgaccctgtccctgccttccaccattattggacatttttgttggtggaccataaaagttatctatgagagcaaacccttctagccctatctt |
13826260 |
T |
|
| Q |
101 |
aacaagatctggttgaggtgccataaaagaaaatgtgtgtgacaaagtatata--tctataggaaacaatgtatttgagctgtttcttgattgagagatt |
198 |
Q |
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||||||||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||||||||| | ||||| |||||||||||||||||||| |
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| T |
13826261 |
aacaagatctggttgaggtgccatagaagataatgtgtgtgataaagtatatatctctataggaaacaatgcaattgaggtgtttcttgattgagagatt |
13826360 |
T |
|
| Q |
199 |
aagagagtactccattatttatacactaagctaatatggtactttacctaaaaagtatcaagggttttattttattgtac---attattattaagagatg |
295 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
13826361 |
aagagagtactccattatttatacacttagctaatatggtactttacctaaaaagtatcaagggttttattttattgtacattattattattaagagatg |
13826460 |
T |
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| Q |
296 |
gcctttg |
302 |
Q |
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||||||| |
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|
| T |
13826461 |
gcctttg |
13826467 |
T |
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