View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19951_low_38 (Length: 305)
Name: NF19951_low_38
Description: NF19951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19951_low_38 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 18 - 292
Target Start/End: Original strand, 2064682 - 2064956
Alignment:
| Q |
18 |
catttaagtactccaaaaaggtgatttctgccaactgttggggaatcttccctgagaggctgttgcgagaaagatctagtgcttcaaggtttaaaagctt |
117 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| || |||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
2064682 |
catttaagaactccaaaaaggtgatttcagccaactgttgaggaattttccctgaaagactgttgagagaaagatctagtgcttcaaggtttgaaagctt |
2064781 |
T |
|
| Q |
118 |
ccctaaggaagacggaatgctgccaataagcatattatttgacaagtttagcaaaacaagacccttgaacttgcctatcatttgtggtatctcgccgctg |
217 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||| |
|
|
| T |
2064782 |
ccctaaggaagatggaatgctgccaataagcatattatttgacaagtttagcaaaacaagaccctttaactcgcctatcatttgtggtatctctccgctg |
2064881 |
T |
|
| Q |
218 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaagcttttcataaaccctggccagtcct |
292 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2064882 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaagcttctcataaaccctggccagtcct |
2064956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 18 - 292
Target Start/End: Original strand, 2121472 - 2121746
Alignment:
| Q |
18 |
catttaagtactccaaaaaggtgatttctgccaactgttggggaatcttccctgagaggctgttgcgagaaagatctagtgcttcaaggtttaaaagctt |
117 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
2121472 |
catttaagtattccaaaaaggtgatttgtgccaactgttggggaattttccctgaaagactgttgagagaaagatctagtgcttcaaggtttgaaagctt |
2121571 |
T |
|
| Q |
118 |
ccctaaggaagacggaatgctgccaataagcatattatttgacaagtttagcaaaacaagacccttgaacttgcctatcatttgtggtatctcgccgctg |
217 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||| |||||| |
|
|
| T |
2121572 |
ccctaaggaagatggaatgctgccaataagcatattatttgacaagtttagcaaaacaagaccctttaattcgcctatcatttgtggtatctctccgctg |
2121671 |
T |
|
| Q |
218 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaagcttttcataaaccctggccagtcct |
292 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2121672 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaagcttctcataaaccctggccagtcct |
2121746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 18 - 283
Target Start/End: Original strand, 2103791 - 2104056
Alignment:
| Q |
18 |
catttaagtactccaaaaaggtgatttctgccaactgttggggaatcttccctgagaggctgttgcgagaaagatctagtgcttcaaggtttaaaagctt |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || |||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
2103791 |
catttaagtactccaaaaaggtgatttctgccaactgttcgggaattttccctgaaagactgttgagagaaagatctagtgcttcaaggtttgaaagctt |
2103890 |
T |
|
| Q |
118 |
ccctaaggaagacggaatgctgccaataagcatattatttgacaagtttagcaaaacaagacccttgaacttgcctatcatttgtggtatctcgccgctg |
217 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | ||||| |||||||| ||||||||||||||||| |||| | |||| ||||||||||| || || ||| |
|
|
| T |
2103891 |
ccctaaggaagatggaatgctgccaataagattgttattcgacaagttgagcaaaacaagacccttcaactcgtctatgatttgtggtatttctccactg |
2103990 |
T |
|
| Q |
218 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaagcttttcataaaccctg |
283 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| |
|
|
| T |
2103991 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaactcttgaagcttctcataaaccctg |
2104056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 18 - 292
Target Start/End: Original strand, 2071790 - 2072064
Alignment:
| Q |
18 |
catttaagtactccaaaaaggtgatttctgccaactgttggggaatcttccctgagaggctgttgcgagaaagatctagtgcttcaaggtttaaaagctt |
117 |
Q |
| |
|
|||||||| | |||||||||||||||| |||||||||||||||||| |||||||| || |||||| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
2071790 |
catttaagaattccaaaaaggtgatttgtgccaactgttggggaattttccctgaaagactgttgacagaaagatctaacgcttcaaggttagaaagctt |
2071889 |
T |
|
| Q |
118 |
ccctaaggaagacggaatgctgccaataagcatattatttgacaagtttagcaaaacaagacccttgaacttgcctatcatttgtggtatctcgccgctg |
217 |
Q |
| |
|
|||||||||||| || ||||| |||||||| |||||||||||||| ||||||||||||||||| |||| |||||||| |||||||||||| |||||| |
|
|
| T |
2071890 |
ccctaaggaagatggtatgcttccaataaggtggttatttgacaagttgagcaaaacaagacccttcaactcgcctatcacttgtggtatctctccgctg |
2071989 |
T |
|
| Q |
218 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaagcttttcataaaccctggccagtcct |
292 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
2071990 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaagcttcacataaaccctggccagtcct |
2072064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 282
Target Start/End: Original strand, 2097494 - 2097758
Alignment:
| Q |
18 |
catttaagtactccaaaaaggtgatttctgccaactgttggggaatcttccctgagaggctgttgcgagaaagatctagtgcttcaaggtttaaaagctt |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||| || ||||| || |||||| |||||||||||||||||||||| ||| ||||||| |
|
|
| T |
2097494 |
catttaagtactccaaaaaggtgatttctgccaactgtttgggaatttttcctgaaagactgttgagagaaagatctagtgcttcaagttttgaaagctt |
2097593 |
T |
|
| Q |
118 |
ccctaaggaagacggaatgctgccaataagcatattatttgacaagtttagcaaaacaagacccttgaacttgcctatcatttgtggtatctcgccgctg |
217 |
Q |
| |
|
|||||||||||| || ||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||| |||||||| |||||||||||| || ||| |
|
|
| T |
2097594 |
ccctaaggaagatggtatgcttccaataagcatattattcgacaagttgagcaaaacaagaccctttaactcgcctatcacttgtggtatctctccactg |
2097693 |
T |
|
| Q |
218 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaagcttttcataaaccct |
282 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| || || ||||| || ||||||||||| |
|
|
| T |
2097694 |
attttgttgcttgaaatatcaatggctattaagctgtagaaattctgaaggttctcataaaccct |
2097758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 18 - 282
Target Start/End: Original strand, 2124864 - 2125128
Alignment:
| Q |
18 |
catttaagtactccaaaaaggtgatttctgccaactgttggggaatcttccctgagaggctgttgcgagaaagatctagtgcttcaaggtttaaaagctt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |||||| |||||||||||||||||||||||||| |||| || |
|
|
| T |
2124864 |
catttaagtactccaaaaaggtgatttctgccaactgttggggaatttttcctgaaagactgttgagagaaagatctagtgcttcaaggtttgaaagatt |
2124963 |
T |
|
| Q |
118 |
ccctaaggaagacggaatgctgccaataagcatattatttgacaagtttagcaaaacaagacccttgaacttgcctatcatttgtggtatctcgccgctg |
217 |
Q |
| |
|
|||||||||||| || |||||||||||||| |||||||||||||| || |||||||| ||||| |||| |||||| | ||||||||||| || ||| |
|
|
| T |
2124964 |
ccctaaggaagatggtatgctgccaataaggtggttatttgacaagttgagtaaaacaagtcccttcaactcgcctataacatgtggtatctctccactg |
2125063 |
T |
|
| Q |
218 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaagcttttcataaaccct |
282 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| || ||||||||||| ||||||||||| |
|
|
| T |
2125064 |
attttgttgcttgaaatatcaatggctattaagctgtagaaattttgaagcttctcataaaccct |
2125128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 18 - 282
Target Start/End: Complemental strand, 2693197 - 2692933
Alignment:
| Q |
18 |
catttaagtactccaaaaaggtgatttctgccaactgttggggaatcttccctgagaggctgttgcgagaaagatctagtgcttcaaggtttaaaagctt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||| |||||| ||||||||||||||| |||||||||| ||||||| |
|
|
| T |
2693197 |
catttaagtactccaaaaaggtgatttcagccaactgttgtggaattttcccagagagactgttgtgagaaagatctagtgtttcaaggtttgaaagctt |
2693098 |
T |
|
| Q |
118 |
ccctaaggaagacggaatgctgccaataagcatattatttgacaagtttagcaaaacaagacccttgaacttgcctatcatttgtggtatctcgccgctg |
217 |
Q |
| |
|
||||| ||||| ||||||||||||||||| | |||||||||||||| ||||||||||||||||| || | |||||| | |||||||||||| || | | |
|
|
| T |
2693097 |
ccctactgaagatggaatgctgccaataaggaggttatttgacaagttgagcaaaacaagacccttcaagtcgcctatgacttgtggtatctctccaccg |
2692998 |
T |
|
| Q |
218 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaagcttttcataaaccct |
282 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | |||||| || ||||||||||| |
|
|
| T |
2692997 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaactcttgaagtttctcataaaccct |
2692933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 18 - 292
Target Start/End: Complemental strand, 2247010 - 2246736
Alignment:
| Q |
18 |
catttaagtactccaaaaaggtgatttctgccaactgttggggaatcttccctgagaggctgttgcgagaaagatctagtgcttcaaggtttaaaagctt |
117 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||||||||||||| || |||||||| || |||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
2247010 |
catttaagtattccaaaaaggtgatttgtgccaactgttggggtattttccctgaaagactgttgagagaaagatctagtgcttcaaggtttgaaagctt |
2246911 |
T |
|
| Q |
118 |
ccctaaggaagacggaatgctgccaataagcatattatttgacaagtttagcaaaacaagacccttgaacttgcctatcatttgtggtatctcgccgctg |
217 |
Q |
| |
|
| | | ||||| ||||||||||||||||| | ||||| |||||||| ||||||||||||||||| |||| ||||| | ||||||||| || || ||| |
|
|
| T |
2246910 |
cgcaattgaagatggaatgctgccaataagattgttattcgacaagttgagcaaaacaagacccttcaactcacctatgacttgtggtatttctccactg |
2246811 |
T |
|
| Q |
218 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaagcttttcataaaccctggccagtcct |
292 |
Q |
| |
|
||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2246810 |
attttattgcttgaaatatcaatggctattaaactgtaaaatttttgaagcttttcataaaccctggccaatcct |
2246736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 2137378 - 2137627
Alignment:
| Q |
18 |
catttaagtactccaaaaaggtgatttctgccaactgttggggaatcttccctgagaggctgttgcgagaaagatctagtgcttcaaggtttaaaagctt |
117 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||||||| || ||||| || |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2137378 |
catttaagaacgccaaaaaggtgatttctgccaactgttggggaatttttcctgaaagactgttgcgagaaagatctagtgcttcaaggttcgaaagctt |
2137477 |
T |
|
| Q |
118 |
ccctaaggaagacggaatgctgccaataagcatattatttgacaagtttagcaaaacaagacccttgaacttgcctatcatttgtggtatctcgccgctg |
217 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| |||| ||| |||| |||||||||||| || ||| |
|
|
| T |
2137478 |
ccctaaggaagatggaatgctgccaataaggtggttatttgacaagttgagcaaaacaagacccttcaactcgccaatcacttgtggtatctctccactg |
2137577 |
T |
|
| Q |
218 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaag |
267 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||| || ||||| |
|
|
| T |
2137578 |
attttgttgcttgaaatatcaatggctattaagcggtaaaaattctgaag |
2137627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 2134262 - 2134510
Alignment:
| Q |
19 |
atttaagtactccaaaaaggtgatttctgccaactgttggggaatcttccctgagaggctgttgcgagaaagatctagtgcttcaaggtttaaaagcttc |
118 |
Q |
| |
|
||||||| ||| ||||||||| |||| |||||||||||||||||| |||||||| || |||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
2134262 |
atttaagaactgcaaaaaggtaatttgtgccaactgttggggaattttccctgaaagactgttgacagaaagatctagtgcttcaaggtttgaaagcttc |
2134361 |
T |
|
| Q |
119 |
cctaaggaagacggaatgctgccaataagcatattatttgacaagtttagcaaaacaagacccttgaacttgcctatcatttgtggtatctcgccgctga |
218 |
Q |
| |
|
||||||||||| |||||||||||||||| | ||||| || ||||| ||||||||||| ||||| |||| |||||| ||||||||| || || |||| |
|
|
| T |
2134362 |
cctaaggaagattgaatgctgccaataaggaggttattagagaagttgagcaaaacaaggcccttcaactcgcctatgccttgtggtatttctccactga |
2134461 |
T |
|
| Q |
219 |
ttttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaag |
267 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||| ||||||||| |
|
|
| T |
2134462 |
ttttgttgcttgaaatatcaatggctattaagttgtaaattttttgaag |
2134510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 270
Target Start/End: Original strand, 2055392 - 2055644
Alignment:
| Q |
18 |
catttaagtactccaaaaaggtgatttctgccaactgttggggaatcttccctgagaggctgttgcgagaaagatctagtgcttcaaggtttaaaagctt |
117 |
Q |
| |
|
|||||||| ||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||| | ||||||||||||||||||||||||| |||||| |
|
|
| T |
2055392 |
catttaagaactccaaaatggtgatttctgtcaactgttagggaactttccctgaaagactgttgagggaaagatctagtgcttcaaggtttataagctt |
2055491 |
T |
|
| Q |
118 |
ccctaaggaagacggaatgctgccaataagcatattatttgacaagtttagcaaaacaagacccttgaacttgcctatcatttgtggtatctcgccgctg |
217 |
Q |
| |
|
||||||||| || || ||||| ||| |||| | |||||||||||||| ||||||||||||||||| || | |||||| ||| |||||||| || ||| |
|
|
| T |
2055492 |
ccctaaggatgatggtatgctaccagtaaggaggttatttgacaagttgagcaaaacaagacccttcaagtcttctatcacttgcggtatctctccactg |
2055591 |
T |
|
| Q |
218 |
attttgttgcttgaaatatcaatggctatcaagctgtaaaatttttgaagctt |
270 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||| || ||||||||||| |
|
|
| T |
2055592 |
attttgttgcttgaaatatcaatggctattaaattgtacaaattttgaagctt |
2055644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 50 - 248
Target Start/End: Complemental strand, 1698105 - 1697907
Alignment:
| Q |
50 |
aactgttggggaatcttccctgagaggctgttgcgagaaagatctagtgcttcaaggtttaaaagcttccctaaggaagacggaatgctgccaataagca |
149 |
Q |
| |
|
|||||||| ||||||||||| || || ||||| ||||||||| ||||||||||||||| ||||||||||||||||||| || ||| ||||| |||| | |
|
|
| T |
1698105 |
aactgttgaggaatcttccccgacagattgttgaaagaaagatccagtgcttcaaggtttgaaagcttccctaaggaagatggtatgttgccagtaagga |
1698006 |
T |
|
| Q |
150 |
tattatttgacaagtttagcaaaacaagacccttgaacttgcctatcatttgtggtatctcgccgctgattttgttgcttgaaatatcaatggctatca |
248 |
Q |
| |
|
| |||||||||||||| ||||||||||| ||||| || | ||||||| | ||||||||| || || |||| |||||||||||||||||||||||||| |
|
|
| T |
1698005 |
tgttatttgacaagttgagcaaaacaaggcccttcaattcgcctatcgctcttggtatctctccacttatttggttgcttgaaatatcaatggctatca |
1697907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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