View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19951_low_74 (Length: 236)
Name: NF19951_low_74
Description: NF19951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19951_low_74 |
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Alignment Details
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 51374112 - 51374315
Alignment:
| Q |
16 |
aaaggagagttgaaaacaatttctccaacaagctggttgtttgagaggtcgaggtttgtaacgtgtggaatttggaaaattgacggggaaacctcaccgg |
115 |
Q |
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| T |
51374112 |
aaaggagagttgaaaacaatttctccaacaagctggttgtttgagaggtcgaggtttgtaacgtgtggaagttggaaaattgacgaggaaacctcaccgg |
51374211 |
T |
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| Q |
116 |
agatgtttttacctgagagtgacacggtgttaatgtgcgaccagttgtcgcaagttatgccgtgccacttgcagatagtgtcggaggaagtgttgaccca |
215 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51374212 |
agatgtttttacctgagagtgacacggtgttaacgtgcgaccagttgtcgcaagttatgccgtgccacttgcagatagtgtcggaggaagtgttgaccca |
51374311 |
T |
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| Q |
216 |
gttg |
219 |
Q |
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|||| |
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| T |
51374312 |
gttg |
51374315 |
T |
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